Psyllid ID: psy4888

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270---
Protein Sequence
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDTSGNETNVAHANENWDSDDKKKK
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHccccccccccccccccEEcHHHHHHHHHHHEEEEHHcccccccccccccccccEEEEEHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccEEEEEEcccccccccccccccccccccccccccEEEcccccccccEEEccccccEEEEEEcccccccccccccHHHHHHcccccccEEEEEccccEEEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccEEEEEEEEcHHHHHHccccccccccHHHccccccEEEEEEHHcccccEEEEEEccccccccccccccHccccccccccccEEEEEccEEEcEEEEEEcccEEEEEEEcccccccccccccHHHccccccccccEEEEEcccccEEEccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MLIHATSLLIVIYLSLCwgkledyefqeidppvmtkprftlppglAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYkvispkghinpniqksnskvvnVINIEDIADTLALCRCWrmyfnpniqksnskvvnVINIEDIADTLALCrcwrsktfpkcdgshaqhnqctgdnrvnkhlyksedvvtnrftvfpsdpplvlcrcweskkfplcdgahrahnernkdnigpaiisasnkhnlymndtsgnetnvahanenwdsddkkkk
Flexible Loop (DISEMBL)
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGhinpniqksnskvvNVINIEDIADTLALCRCWRMYFNpniqksnskvVNVINIEDIADTLALCRCWRSKTFpkcdgshaqhnqctgdnrvNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRahnernkdnigPAIISASNKHNLYMNDTSGNetnvahanenwdsddkkkk
Low Complexity Region (SEG)
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDTSGNETNVAHANENWDSDDKKKK
Disordered region (IsUnstruct)
**IHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAH***************************************************
Disordered Region (DISOPRED)
****ATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHI************NVINIEDIADTLALCR*********IQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQ*********HLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHN****DNIGPAIISASNKHNLYMNDTSGNETNVAH*************
Disordered Region (DISEMBL)
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFP*********NQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDTSGNETNVAHANE**********
Disordered Region (DISPRO)
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDTSGNETNVAHANENWD*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLIHATSLLIVIYLSLCWGKLEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDTSGNETNVAHANENWDSDDKKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	273	2.2.26 [Sep-21-2011]
B4MBU8	133	CDGSH iron-sulfur domain-	N/A	N/A	0.340	0.699	0.398	3e-15
B3M1H7	134	CDGSH iron-sulfur domain-	N/A	N/A	0.344	0.701	0.372	1e-14
C3ZWH9	131	CDGSH iron-sulfur domain-	yes	N/A	0.230	0.480	0.578	4e-14
C4A0P0	131	CDGSH iron-sulfur domain-	yes	N/A	0.230	0.480	0.578	4e-14
Q8N5K1	135	CDGSH iron-sulfur domain-	yes	N/A	0.234	0.474	0.606	8e-14
Q05B71	135	CDGSH iron-sulfur domain-	yes	N/A	0.234	0.474	0.606	8e-14
Q9CQB5	135	CDGSH iron-sulfur domain-	yes	N/A	0.369	0.748	0.374	1e-13
Q3ZBU2	106	CDGSH iron-sulfur domain-	no	N/A	0.190	0.490	0.615	1e-13
B4NFN4	134	CDGSH iron-sulfur domain-	N/A	N/A	0.347	0.708	0.330	1e-13
B4K5X8	131	CDGSH iron-sulfur domain-	N/A	N/A	0.333	0.694	0.381	1e-13

>sp|B4MBU8|CISD2_DROVI CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila virilis GN=GJ14516 PE=3 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 25/118 (21%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P   V+ GI Y  Y+   PK H      KS S                LC 
Sbjct: 32  SFKDWLALIPPTAVVVGIGYVTYRAFYPKAH---RTCKSGS---------------GLC- 72

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
                 N N++K  +KVV++I+IE+IAD  A CRCW++K +P CDGSHA HN+ TGDN
Sbjct: 73  ------NENVRKHEAKVVDMIDIENIADKAAFCRCWKTKNWPYCDGSHAAHNKDTGDN 124

Drosophila virilis (taxid: 7244)

>sp|B3M1H7|CISD2_DROAN CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila ananassae GN=GF16608 PE=3 SV=1

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 24/118 (20%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P  +V+ GI Y  Y    P      +  KS                    R
Sbjct: 32  SFKDWLALIPPTVVVAGIGYTGYLAFCPAAQARCSATKSG-------------------R 72

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           C     N  I+K   KVV+ I++EDIAD  A CRCW+SK +P CDGSH +HN+ TGDN
Sbjct: 73  C-----NNQIRKHEPKVVDTIDVEDIADKAAFCRCWKSKNWPYCDGSHGEHNKLTGDN 125

Drosophila ananassae (taxid: 7217)

>sp|C3ZWH9|CID2A_BRAFL CDGSH iron-sulfur domain-containing protein 2 homolog A OS=Branchiostoma floridae GN=BRAFLDRAFT_285975 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYK 186
           N  IQK +SKVVN+++IED+ + +  CRCWRSK FP CDGSHA+HN+ TGDN V   + K
Sbjct: 69  NLRIQKESSKVVNMVDIEDLGNKVCYCRCWRSKKFPLCDGSHAKHNEDTGDN-VGPLVLK 127

Query: 187 SEDV 190
            +DV
Sbjct: 128 RKDV 131

Branchiostoma floridae (taxid: 7739)

>sp|C4A0P0|CID2B_BRAFL CDGSH iron-sulfur domain-containing protein 2 homolog B OS=Branchiostoma floridae GN=BRAFLDRAFT_274541 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYK 186
           N  IQK +SKVVN+++IED+ + +  CRCWRSK FP CDGSHA+HN+ TGDN V   + K
Sbjct: 69  NLRIQKESSKVVNMVDIEDLGNKVCYCRCWRSKKFPLCDGSHAKHNEDTGDN-VGPLVLK 127

Query: 187 SEDV 190
            +DV
Sbjct: 128 RKDV 131

Branchiostoma floridae (taxid: 7739)

>sp|Q8N5K1|CISD2_HUMAN CDGSH iron-sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 126 FNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHL 184
            N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   +
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLI 129

Query: 185 YKSEDV 190
            K ++V
Sbjct: 130 LKKKEV 135

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Homo sapiens (taxid: 9606)

>sp|Q05B71|CISD2_BOVIN CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 126 FNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHL 184
            N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   +
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLI 129

Query: 185 YKSEDV 190
            K ++V
Sbjct: 130 LKKKEV 135

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Bos taurus (taxid: 9913)

>sp|Q9CQB5|CISD2_MOUSE CDGSH iron-sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 30/131 (22%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           +++D+++ +P+  VL  + Y   +   PK       Q+ +S +                 
Sbjct: 34  TVSDWLRLLPFLGVLALLGYLAVRPFFPKKK-----QQKDSLI----------------- 71

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNR 179
                 N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN 
Sbjct: 72  ------NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN- 124

Query: 180 VNKHLYKSEDV 190
           V   + K ++V
Sbjct: 125 VGPLILKKKEV 135

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Mus musculus (taxid: 10090)

>sp|Q3ZBU2|CISD1_BOVIN CDGSH iron-sulfur domain-containing protein 1 OS=Bos taurus GN=CISD1 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 39/52 (75%)

Query: 127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           NP+IQK N KVV+  ++ED+ D    CRCWRSK FP CDGSH +HN+ TGDN
Sbjct: 44  NPHIQKDNPKVVHAFDMEDLGDKAVYCRCWRSKKFPLCDGSHTKHNEETGDN 95

Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation. May be involved in Fe-S cluster shuttling and/or in redox reactions.

Bos taurus (taxid: 9913)

>sp|B4NFN4|CISD2_DROWI CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila willistoni GN=GK22673 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 23/118 (19%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P  +V+ GI Y  Y    P      + +K++ +  N+I             
Sbjct: 32  SFKDWLALIPPTVVVAGIGYTGYLAFCPAAQDRCSAKKNSGRCNNLI------------- 78

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
                     +K  +KVV++I++EDIA+  A CRCW++K +P CDGSH +HN+ TGDN
Sbjct: 79  ----------RKHEAKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDN 126

Drosophila willistoni (taxid: 7260)

>sp|B4K5X8|CISD2_DROMO CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila mojavensis GN=GI10402 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 27/118 (22%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P   V+ GI Y  Y+ + P        +KS S                  R
Sbjct: 32  SFKDWLALIPPTAVVVGIGYISYQALCPAAQ-----RKSCSG-----------------R 69

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           C     N NI+K  +KVV++I+IE+IAD  A CRCW++K +P CDGSH +HN+ TGDN
Sbjct: 70  C-----NDNIRKHEAKVVDMIDIENIADKAAFCRCWKTKNWPYCDGSHGEHNKNTGDN 122

Drosophila mojavensis (taxid: 7230)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	273
195399990	133	GJ14516 [Drosophila virilis] gi|29046317	0.340	0.699	0.398	2e-13
50746903	134	PREDICTED: CDGSH iron-sulfur domain-cont	0.234	0.477	0.615	3e-13
350405222	132	PREDICTED: CDGSH iron-sulfur domain-cont	0.377	0.780	0.35	4e-13
449265881	115	CDGSH iron sulfur domain-containing prot	0.234	0.556	0.615	6e-13
194744449	134	GF16608 [Drosophila ananassae] gi|290463	0.344	0.701	0.372	6e-13
357608050	132	hypothetical protein KGM_15055 [Danaus p	0.366	0.757	0.340	1e-12
345307124	250	PREDICTED: hypothetical protein LOC10007	0.494	0.54	0.339	1e-12
340726148	132	PREDICTED: CDGSH iron-sulfur domain-cont	0.377	0.780	0.35	2e-12
332216951	240	PREDICTED: CDGSH iron-sulfur domain-cont	0.238	0.270	0.597	2e-12
332819993	263	PREDICTED: CDGSH iron-sulfur domain-cont	0.234	0.243	0.606	2e-12

>gi|195399990|ref|XP_002058601.1| GJ14516 [Drosophila virilis] gi|290463174|sp|B4MBU8.1|CISD2_DROVI RecName: Full=CDGSH iron-sulfur domain-containing protein 2 homolog gi|194142161|gb|EDW58569.1| GJ14516 [Drosophila virilis]

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 25/118 (21%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P   V+ GI Y  Y+   PK H      KS S                LC 
Sbjct: 32  SFKDWLALIPPTAVVVGIGYVTYRAFYPKAH---RTCKSGS---------------GLC- 72

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
                 N N++K  +KVV++I+IE+IAD  A CRCW++K +P CDGSHA HN+ TGDN
Sbjct: 73  ------NENVRKHEAKVVDMIDIENIADKAAFCRCWKTKNWPYCDGSHAAHNKDTGDN 124

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|50746903|ref|XP_420668.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 [Gallus gallus] gi|326919081|ref|XP_003205812.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like [Meleagris gallopavo]

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 126 FNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
            N  IQK N KVVN INIED+  T A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDN-VGPLIL 129

Query: 186 KSEDV 190
           K ++V
Sbjct: 130 KKKEV 134

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350405222|ref|XP_003487364.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 homolog [Bombus impatiens]

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 37/140 (26%)

Query: 39  FTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQK 98
             +P  +   F  GIR         D++  VP   +L GI Y  YK   PK    P    
Sbjct: 19  LPIPDTIGGWFRLGIR---------DWISLVPPTALLAGIGYMSYKAFCPKARGPP---- 65

Query: 99  SNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRS 158
                               C     + NPNI+K  +KVV+ ++IEDI +  A CRCWRS
Sbjct: 66  --------------------CG----FVNPNIKKDVNKVVDTVDIEDITEKAAFCRCWRS 101

Query: 159 KTFPKCDGSHAQHNQCTGDN 178
           K +P CDG+H +HNQ T DN
Sbjct: 102 KNWPYCDGAHGRHNQETNDN 121

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449265881|gb|EMC77011.1| CDGSH iron sulfur domain-containing protein 2, partial [Columba livia]

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 126 FNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
            N  IQK N KVVN INIED+  T A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct: 52  INLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDN-VGPLIL 110

Query: 186 KSEDV 190
           K ++V
Sbjct: 111 KKKEV 115

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194744449|ref|XP_001954707.1| GF16608 [Drosophila ananassae] gi|290463167|sp|B3M1H7.1|CISD2_DROAN RecName: Full=CDGSH iron-sulfur domain-containing protein 2 homolog gi|190627744|gb|EDV43268.1| GF16608 [Drosophila ananassae]

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 24/118 (20%)

Query: 61  SLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCR 120
           S  D++  +P  +V+ GI Y  Y    P      +  KS                    R
Sbjct: 32  SFKDWLALIPPTVVVAGIGYTGYLAFCPAAQARCSATKSG-------------------R 72

Query: 121 CWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           C     N  I+K   KVV+ I++EDIAD  A CRCW+SK +P CDGSH +HN+ TGDN
Sbjct: 73  C-----NNQIRKHEPKVVDTIDVEDIADKAAFCRCWKSKNWPYCDGSHGEHNKLTGDN 125

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608050|gb|EHJ65798.1| hypothetical protein KGM_15055 [Danaus plexippus]

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 38/138 (27%)

Query: 41  LPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQKSN 100
           +P      F  G+R         D++  +P  L +GGISY  Y+ I          +  N
Sbjct: 21  IPDSFGGWFRLGVR---------DWLALLPPTLAIGGISYYSYQTIKKAN------EAGN 65

Query: 101 SKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKT 160
            +V                       NP I+K  +KVV+ I+IEDI + ++LCRCWRSK 
Sbjct: 66  GQV-----------------------NPGIRKDINKVVDFIDIEDITEKVSLCRCWRSKN 102

Query: 161 FPKCDGSHAQHNQCTGDN 178
           +P CDG+H  HN+ TGDN
Sbjct: 103 WPYCDGAHGAHNKATGDN 120

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345307124|ref|XP_001506904.2| PREDICTED: hypothetical protein LOC100075406 [Ornithorhynchus anatinus]

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 36/171 (21%)

Query: 21  LEDYEFQEIDPPVMTKPRFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISY 80
           L D   +  DP     P  +  PG        I  K    +LA +++ +P+  VL  + Y
Sbjct: 115 LIDRWIRPCDPITQDSPEPSTGPGC------NISLKFLTSALAKWLRLLPFLGVLALLGY 168

Query: 81  GVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNV 140
                      + P + K   +  ++IN++                   IQK N KVVN 
Sbjct: 169 LA---------VRPFLPKKKQQKDSLINLK-------------------IQKENPKVVNE 200

Query: 141 INIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDV 190
           INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + K ++V
Sbjct: 201 INIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLILKKKEV 250

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340726148|ref|XP_003401424.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 homolog [Bombus terrestris]

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 62/140 (44%), Gaps = 37/140 (26%)

Query: 39  FTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHINPNIQK 98
             +P  +   F  GIR         D++  VP   +L GI Y  YK   PK         
Sbjct: 19  LPIPDTIGGWFRLGIR---------DWISLVPPTALLAGIGYMSYKAFCPKAR------- 62

Query: 99  SNSKVVNVINIEDIADTLALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRS 158
                              LC       NPNI+K  +KVV+ ++IEDI +  A CRCWRS
Sbjct: 63  -----------------EPLCG----LVNPNIKKDVNKVVDTVDIEDITEKAAFCRCWRS 101

Query: 159 KTFPKCDGSHAQHNQCTGDN 178
           K +P CDG+H  HNQ T DN
Sbjct: 102 KNWPYCDGTHGSHNQETNDN 121

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332216951|ref|XP_003257613.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 [Nomascus leucogenys]

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 2/67 (2%)

Query: 125 YFNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKH 183
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   
Sbjct: 175 LINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPL 233

Query: 184 LYKSEDV 190
           + K ++V
Sbjct: 234 ILKKKEV 240

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332819993|ref|XP_003310469.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 [Pan troglodytes]

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 126 FNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHL 184
            N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   +
Sbjct: 199 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPTCDGSHNKHNELTGDN-VGPLI 257

Query: 185 YKSEDV 190
            K ++V
Sbjct: 258 LKKKEV 263

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	273
UNIPROTKB|F1NBE2	137	CISD2 "Uncharacterized protein	0.230	0.459	0.625	1.1e-16
MGI|MGI:1914256	135	Cisd2 "CDGSH iron sulfur domai	0.230	0.466	0.615	6e-16
UNIPROTKB|Q05B71	135	CISD2 "CDGSH iron-sulfur domai	0.230	0.466	0.615	6e-16
UNIPROTKB|E2R702	135	CISD2 "Uncharacterized protein	0.230	0.466	0.615	6e-16
UNIPROTKB|Q8N5K1	135	CISD2 "CDGSH iron-sulfur domai	0.230	0.466	0.615	6e-16
UNIPROTKB|F1S108	135	CISD2 "Uncharacterized protein	0.230	0.466	0.615	6e-16
UNIPROTKB|D6RCF4	145	CISD2 "CDGSH iron-sulfur domai	0.230	0.434	0.615	6e-16
UNIPROTKB|Q3ZBU2	106	CISD1 "CDGSH iron-sulfur domai	0.227	0.584	0.555	1.3e-15
RGD|1566242	135	Cisd2 "CDGSH iron sulfur domai	0.230	0.466	0.6	2e-15
UNIPROTKB|Q5I027	135	cisd2 "CDGSH iron-sulfur domai	0.230	0.466	0.6	2.6e-15

UNIPROTKB|F1NBE2 CISD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query:   127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYK 186
             N  IQK N KVVN INIED+  T A CRCWRSKTFP CDGSH +HN+ TGDN V   + K
Sbjct:    75 NLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDN-VGPLILK 133

Query:   187 SEDV 190
              ++V
Sbjct:   134 KKEV 137

GO:0000422 "mitochondrion degradation" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

MGI|MGI:1914256 Cisd2 "CDGSH iron sulfur domain 2" [Mus musculus (taxid:10090)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0000422 "mitochondrion degradation" evidence=IMP

GO:0005739 "mitochondrion" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO;IDA

GO:0006914 "autophagy" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IMP

GO:0010506 "regulation of autophagy" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0044444 "cytoplasmic part" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISO

UNIPROTKB|Q05B71 CISD2 "CDGSH iron-sulfur domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043234 "protein complex" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R702 CISD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

UNIPROTKB|Q8N5K1 CISD2 "CDGSH iron-sulfur domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010506 "regulation of autophagy" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0043234 "protein complex" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|F1S108 CISD2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

UNIPROTKB|D6RCF4 CISD2 "CDGSH iron-sulfur domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    82 NLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 140

Query:   186 KSEDV 190
             K ++V
Sbjct:   141 KKKEV 145

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q3ZBU2 CISD1 "CDGSH iron-sulfur domain-containing protein 1" [Bos taurus (taxid:9913)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:   127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYK 186
             NP+IQK N KVV+  ++ED+ D    CRCWRSK FP CDGSH +HN+ TGDN V   + K
Sbjct:    44 NPHIQKDNPKVVHAFDMEDLGDKAVYCRCWRSKKFPLCDGSHTKHNEETGDN-VGPLIIK 102

Query:   187 SED 189
              +D
Sbjct:   103 KKD 105

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1566242 Cisd2 "CDGSH iron sulfur domain 2" [Rattus norvegicus (taxid:10116)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/65 (60%), Positives = 46/65 (70%)

Query:   127 NPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+  T  A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLNLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             + ++V
Sbjct:   131 RKKEV 135

GO:0000422 "mitochondrion degradation" evidence=IEA;ISO

GO:0005741 "mitochondrial outer membrane" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0010259 "multicellular organismal aging" evidence=IEA;ISO

GO:0010506 "regulation of autophagy" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=IEA;ISO

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;ISO

UNIPROTKB|Q5I027 cisd2 "CDGSH iron-sulfur domain-containing protein 2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 39/65 (60%), Positives = 45/65 (69%)

Query:   127 NPNIQKSNSKVVNVINIEDI-ADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLY 185
             N  IQK N KVVN INIED+     A CRCWRSKTFP CDGSH +HN+ TGDN V   + 
Sbjct:    72 NLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDN-VGPLIL 130

Query:   186 KSEDV 190
             K ++V
Sbjct:   131 KKKEV 135

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
C4A0P0	CID2B_BRAFL	No assigned EC number	0.5781	0.2307	0.4809	yes	N/A
C3ZWH9	CID2A_BRAFL	No assigned EC number	0.5781	0.2307	0.4809	yes	N/A
Q8N5K1	CISD2_HUMAN	No assigned EC number	0.6060	0.2344	0.4740	yes	N/A
Q05B71	CISD2_BOVIN	No assigned EC number	0.6060	0.2344	0.4740	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	273
smart00704	38	smart00704, ZnF_CDGSH, CDGSH-type zinc finger	3e-09
smart00704	38	smart00704, ZnF_CDGSH, CDGSH-type zinc finger	2e-08
pfam09360	34	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGS	4e-07
pfam09360	34	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGS	3e-06

>gnl|CDD|197836 smart00704, ZnF_CDGSH, CDGSH-type zinc finger

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 136 KVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHN 172
           K  + + +E      ALCRC RSK FP CDGSH +HN
Sbjct: 1   KRPDEVEVEK-RKKYALCRCGRSKNFPYCDGSHKKHN 36

Function unknown. Length = 38

>gnl|CDD|197836 smart00704, ZnF_CDGSH, CDGSH-type zinc finger

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 15/24 (62%), Positives = 18/24 (75%)

Query: 205 VLCRCWESKKFPLCDGAHRAHNER 228
            LCRC  SK FP CDG+H+ HNE+
Sbjct: 15  ALCRCGRSKNFPYCDGSHKKHNEQ 38

Function unknown. Length = 38

>gnl|CDD|220203 pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 16/29 (55%), Positives = 17/29 (58%)

Query: 141 INIEDIADTLALCRCWRSKTFPKCDGSHA 169
             +E    T ALCRC RSK  P CDGSH 
Sbjct: 6   YKVELEKKTYALCRCGRSKNQPFCDGSHK 34

The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm. Length = 34

>gnl|CDD|220203 pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 206 LCRCWESKKFPLCDGAHR 223
           LCRC  SK  P CDG+H+
Sbjct: 17  LCRCGRSKNQPFCDGSHK 34

The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm. Length = 34

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	273
KOG3461|consensus	132		99.97
KOG4605|consensus	129		99.91
KOG3461|consensus	132		99.57
KOG4605|consensus	129		99.55
smart00704	38	ZnF_CDGSH CDGSH-type zinc finger. Function unknown	99.42
PF09360	38	zf-CDGSH: Iron-binding zinc finger CDGSH type; Int	99.38
smart00704	38	ZnF_CDGSH CDGSH-type zinc finger. Function unknown	99.38
PF09360	38	zf-CDGSH: Iron-binding zinc finger CDGSH type; Int	99.3
PF10660	64	MitoNEET_N: Iron-containing outer mitochondrial me	99.17
COG3369	78	Zinc finger domain containing protein (CDGSH-type)	99.0
COG3369	78	Zinc finger domain containing protein (CDGSH-type)	98.63

>KOG3461|consensus

Probab=99.97  E-value=3.2e-31  Score=221.01  Aligned_cols=112  Identities=40%  Similarity=0.645  Sum_probs=101.9

Q ss_pred             CcCCcchHHHHHHHHhhhhcccchhhhhhhch--hhhhheeeeeeEEEeccCCCCCCCccccCCCcceeeeehhhhHhHh
Q psy4888          39 FTLPPGLAERFAEGIRKKVDAKSLADFVKYVP--YALVLGGISYGVYKVISPKGHINPNIQKSNSKVVNVINIEDIADTL  116 (273)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~y~~~~~~~~k~~~n~~~~~~n~~vv~~~~ie~i~~~~  116 (273)
                      .+-|.+|..++    -     .++++|.+++|  +++++|+++|++|++|+.+...|                       
T Consensus        18 ~~~~~~l~~~~----~-----~~~~~~~~v~~p~v~~~ta~~~y~ay~r~~~k~~~n-----------------------   65 (132)
T KOG3461|consen   18 WTTPMSLSSSS----L-----GTVKDIAAVTPPCVAAGTAATAYLAYKRFYVKDHQN-----------------------   65 (132)
T ss_pred             cCchhhhhhhh----h-----ccccchhhcCCcceecchhhhhhhhheeeeeeeccc-----------------------
Confidence            46678888877    2     67889999998  88889999999999988887753                       


Q ss_pred             hhhhcccccccccccccCceeEEeeecccCCcceEEeecCCCCCCCCCCcccccCccccCCCcccceeeecc
Q psy4888         117 ALCRCWRMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSE  188 (273)
Q Consensus       117 ~~C~cg~~~vnp~I~k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE  188 (273)
                            ++++|+.|++++|++||.+||||.|++..|||||||++||||||||.+||+++|||+|||++++++
T Consensus        66 ------~a~iN~hIqkd~pKIVd~~d~eDl~~ka~yCrCWrs~kfP~CDGsh~KhNk~tgdNvgpliikk~~  131 (132)
T KOG3461|consen   66 ------KARINLHIQKDNPKIVDAFDMEDLGDKAAYCRCWRSKKFPLCDGSHGKHNKETGDNVGPLIIKKKE  131 (132)
T ss_pred             ------CccccceeecCCCceeEEEehhhhcccceEEEeeccCCcccccCcccccccccccccccceeeecc
Confidence                  889999999999999999999999999999999999999999999999999999999999998865

>KOG4605|consensus

Probab=99.91  E-value=1.1e-24  Score=181.13  Aligned_cols=83  Identities=27%  Similarity=0.488  Sum_probs=74.4

Q ss_pred             ccccccccCceeEEeeecccCCcceEEeecCCCCCCCCCCcccccCccccCCCcccceeeeccceeccceeecCCCCcEE
Q psy4888         126 FNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLV  205 (273)
Q Consensus       126 vnp~I~k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE~~V~~~g~v~~~~~~~~  205 (273)
                      -+..|+...|..|+++    .|++|.||.||+|++||||||||...   .-.+..|+.|+.++            +++|+
T Consensus        38 ~~g~v~~k~p~KVhL~----a~KtY~WCsCG~S~sQPfCDGsHk~~---~~tklrPvrFkvek------------tg~~w   98 (129)
T KOG4605|consen   38 ARGVVALKTPIKVHLV----AGKTYRWCSCGRSKSQPFCDGSHKFQ---GRTKLRPVRFKVEK------------TGMVW   98 (129)
T ss_pred             cCceecccCceEEEEe----cCCEEEEEeccccCCCcccccccccc---ccccccceEeEecc------------cceEE
Confidence            4778999999999996    89999999999999999999999852   24678999999887            68999


Q ss_pred             EEecCCCCCCCcccCCCccCcc
Q psy4888         206 LCRCWESKKFPLCDGAHRAHNE  227 (273)
Q Consensus       206 lC~Cg~S~n~PfCDGSH~~~~~  227 (273)
                      ||.|+++.+.|||||+|+....
T Consensus        99 lCnCKqT~~rP~CDGtH~~~~~  120 (129)
T KOG4605|consen   99 LCNCKQTQRRPYCDGTHRSERV  120 (129)
T ss_pred             eecccccCCCCccCCccccccc
Confidence            9999999999999999987644

>KOG3461|consensus

Probab=99.57  E-value=1.5e-15  Score=127.31  Aligned_cols=67  Identities=40%  Similarity=0.825  Sum_probs=62.7

Q ss_pred             CCCcccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCccCccCCCCCccceeEEEec
Q psy4888         176 GDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASN  242 (273)
Q Consensus       176 gDn~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~~ek  242 (273)
                      +..+.+++|+++++++++.+++++.+....+|+||+|+++|||||||.+++++++||+||++++.++
T Consensus        65 n~a~iN~hIqkd~pKIVd~~d~eDl~~ka~yCrCWrs~kfP~CDGsh~KhNk~tgdNvgpliikk~~  131 (132)
T KOG3461|consen   65 NKARINLHIQKDNPKIVDAFDMEDLGDKAAYCRCWRSKKFPLCDGSHGKHNKETGDNVGPLIIKKKE  131 (132)
T ss_pred             cCccccceeecCCCceeEEEehhhhcccceEEEeeccCCcccccCcccccccccccccccceeeecc
Confidence            4567899999999999999999999999999999999999999999999999999999999997664

>KOG4605|consensus

Probab=99.55  E-value=4.3e-15  Score=124.16  Aligned_cols=58  Identities=17%  Similarity=0.433  Sum_probs=51.2

Q ss_pred             cccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCccCccCCCCCccceeEEEeccceEEecCC
Q psy4888         179 RVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMNDT  251 (273)
Q Consensus       179 ~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~~ek~~~v~lC~~  251 (273)
                      ..|.+|..+.            +++|.||-||+|+++|||||||+...   ..+.+|++|++||++.||||||
T Consensus        45 k~p~KVhL~a------------~KtY~WCsCG~S~sQPfCDGsHk~~~---~tklrPvrFkvektg~~wlCnC  102 (129)
T KOG4605|consen   45 KTPIKVHLVA------------GKTYRWCSCGRSKSQPFCDGSHKFQG---RTKLRPVRFKVEKTGMVWLCNC  102 (129)
T ss_pred             cCceEEEEec------------CCEEEEEeccccCCCccccccccccc---cccccceEeEecccceEEeecc
Confidence            3576766555            68999999999999999999998865   5799999999999999999996

>smart00704 ZnF_CDGSH CDGSH-type zinc finger

Probab=99.42  E-value=1.6e-13  Score=93.86  Aligned_cols=36  Identities=56%  Similarity=0.994  Sum_probs=29.4

Q ss_pred             CceeEEeeecccCCcceEEeecCCCCCCCCCCcccccCcc
Q psy4888         134 NSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQ  173 (273)
Q Consensus       134 ~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~~nk  173 (273)
                      .|..+++   | .+++|+||+||+|+++|||||||..+++
T Consensus         2 ~P~~~~~---e-~~~~~~lC~C~~S~~~PfCDGsH~~~~~   37 (38)
T smart00704        2 RPDEVEV---E-KREKYALCRCGRSKNFPYCDGSHKKHNE   37 (38)
T ss_pred             CCEEEEe---c-CCCEEEEeeCCCCCCCCccCCcccCcCc
Confidence            4666655   3 5789999999999999999999986543

Function unknown.

>PF09360 zf-CDGSH: Iron-binding zinc finger CDGSH type; InterPro: IPR018967 This entry represents iron-sulphur domain containing proteins that have a CDGSH sequence motif (although the Ser residue can also be an Ala or Thr), and is found in proteins from a wide range of organisms with the exception of fungi

Probab=99.38  E-value=2.1e-13  Score=93.10  Aligned_cols=37  Identities=43%  Similarity=0.635  Sum_probs=25.5

Q ss_pred             ccCceeEEeeecccCCcceEEeecCCCCCCCCCCcccc
Q psy4888         132 KSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHA  169 (273)
Q Consensus       132 k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~  169 (273)
                      +++|++|+. +.+...++|+|||||+|+++|||||||+
T Consensus         2 ~~~P~~v~g-~~~~~~~~~~lC~Cg~S~~~PfCDGsH~   38 (38)
T PF09360_consen    2 DNGPYKVEG-DTELEKGTYALCRCGKSKNKPFCDGSHK   38 (38)
T ss_dssp             TTSSEEEEE-CGGCSTSEEEE-SSS--TTTTB--SHHH
T ss_pred             CCcCEEEEe-eEEecCCEEEEecCCCCCCCCccCCcCC
Confidence            578999965 3333458999999999999999999994

The CDGSH-type domain binds a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family []. CDGSH-type domains are found in mitoNEET, an iron-containing integral protein of the outer mitochondrian membrane (OMM). MitoNEET forms a dimeric structure with a NEET fold, and contains two domains: a beta-cap region and a cluster-binding domain that coordinated two acid-labile 2Fe-2S clusters (one bound to each protomer) []. The CDGSH iron-sulphur domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, (IPR019610 from INTERPRO) [, ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM. ; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 3TBO_A 3FNV_B 3TBM_B 3TBN_A 3S2R_A 3S2Q_A 3LPQ_A 2QH7_A 3EW0_A 2R13_A ....

>smart00704 ZnF_CDGSH CDGSH-type zinc finger

Probab=99.38  E-value=3.9e-13  Score=91.96  Aligned_cols=27  Identities=56%  Similarity=1.149  Sum_probs=24.3

Q ss_pred             CCcEEEEecCCCCCCCcccCCCccCcc
Q psy4888         201 DPPLVLCRCWESKKFPLCDGAHRAHNE  227 (273)
Q Consensus       201 ~~~~~lC~Cg~S~n~PfCDGSH~~~~~  227 (273)
                      ++.++||+||+|+|+|||||||...+.
T Consensus        11 ~~~~~lC~C~~S~~~PfCDGsH~~~~~   37 (38)
T smart00704       11 REKYALCRCGRSKNFPYCDGSHKKHNE   37 (38)
T ss_pred             CCEEEEeeCCCCCCCCccCCcccCcCc
Confidence            578999999999999999999987643

Function unknown.

>PF09360 zf-CDGSH: Iron-binding zinc finger CDGSH type; InterPro: IPR018967 This entry represents iron-sulphur domain containing proteins that have a CDGSH sequence motif (although the Ser residue can also be an Ala or Thr), and is found in proteins from a wide range of organisms with the exception of fungi

Probab=99.30  E-value=8.5e-13  Score=90.08  Aligned_cols=37  Identities=30%  Similarity=0.562  Sum_probs=24.6

Q ss_pred             CcccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCc
Q psy4888         178 NRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHR  223 (273)
Q Consensus       178 n~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~  223 (273)
                      ..+|+.|+++.         ..+.++++||+||+|+|+|||||||+
T Consensus         2 ~~~P~~v~g~~---------~~~~~~~~lC~Cg~S~~~PfCDGsH~   38 (38)
T PF09360_consen    2 DNGPYKVEGDT---------ELEKGTYALCRCGKSKNKPFCDGSHK   38 (38)
T ss_dssp             TTSSEEEEECG---------GCSTSEEEE-SSS--TTTTB--SHHH
T ss_pred             CCcCEEEEeeE---------EecCCEEEEecCCCCCCCCccCCcCC
Confidence            35788887622         22348999999999999999999995

The CDGSH-type domain binds a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family []. CDGSH-type domains are found in mitoNEET, an iron-containing integral protein of the outer mitochondrian membrane (OMM). MitoNEET forms a dimeric structure with a NEET fold, and contains two domains: a beta-cap region and a cluster-binding domain that coordinated two acid-labile 2Fe-2S clusters (one bound to each protomer) []. The CDGSH iron-sulphur domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, (IPR019610 from INTERPRO) [, ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM. ; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 3TBO_A 3FNV_B 3TBM_B 3TBN_A 3S2R_A 3S2Q_A 3LPQ_A 2QH7_A 3EW0_A 2R13_A ....

>PF10660 MitoNEET_N: Iron-containing outer mitochondrial membrane protein N-terminus ; InterPro: IPR019610 The CDGSH iron sulphur domain are a group of iron-sulphur (Fe-S) clusters and a unique 39 amino acid CDGSH domain [C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H]

Probab=99.17  E-value=4.2e-12  Score=95.90  Aligned_cols=46  Identities=30%  Similarity=0.617  Sum_probs=3.9

Q ss_pred             CCcCCcchHHHHHHHHhhhhcccchhhhhhhchhhhhheeeeeeEEEeccCCCCC
Q psy4888          38 RFTLPPGLAERFAEGIRKKVDAKSLADFVKYVPYALVLGGISYGVYKVISPKGHI   92 (273)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~k~~~   92 (273)
                      ++|||+++++||    +     |+++||++++|+++++|++||++|+.|++|.+.
T Consensus        18 ~lPiP~s~gg~f----~-----Ls~kdWl~Lvp~~~~va~igYlayk~f~pk~~~   63 (64)
T PF10660_consen   18 SLPIPDSFGGFF----K-----LSVKDWLALVPFAAAVAGIGYLAYKPFCPKKKC   63 (64)
T ss_dssp             -----------------------------------------------CC---STT
T ss_pred             cccccccccccc----c-----ccHHHHHHHHhHHHHHHHHHHHhheeecccccC
Confidence            589999999999    7     999999999999999999999999999999864

The CDGSH iron sulphur domain protein (also referred to as mitoNEET) is an integral membrane protein located in the outer mitochondrial membrane and whose function may be to transport iron into the mitochondria []. Iron in turn is essential for the function of several mitochondrial enzymes. This entry represents the N-terminal of the mitoNEET and Miner-type proteins that carry a CDGSH-type cluster-binding domain (IPR018967 from INTERPRO) that coordinate a redox-active 2Fe-2S cluster. In the outer mitochondrian membrane (OMM), the CDGSH 2Fe-2S-containing domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by the N-terminal domain found in higher vertebrates [, , ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM.; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 2R13_A 3REE_A 2QD0_B.

>COG3369 Zinc finger domain containing protein (CDGSH-type) [Function unknown]

Probab=99.00  E-value=2.8e-10  Score=88.92  Aligned_cols=50  Identities=28%  Similarity=0.406  Sum_probs=35.0

Q ss_pred             cccceeeeccceecc-cee---ecCCCCcEEEEecCCCCCCCcccCCCccCccC
Q psy4888         179 RVNKHLYKSEDVVTN-RFT---VFPSDPPLVLCRCWESKKFPLCDGAHRAHNER  228 (273)
Q Consensus       179 ~GPLkVKkEE~~V~~-~g~---v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~  228 (273)
                      .||..+++...+|.. +|-   +.+....++|||||.|.|+|||||||++...+
T Consensus         2 nGPy~v~~~~riv~~~~gh~~~~~~g~~~~~LCrCG~S~NKPfCDGtH~k~gf~   55 (78)
T COG3369           2 NGPYLVRGRLRIVTHTAGHPEEVKDGDEQAALCRCGHSENKPFCDGTHKKTGFD   55 (78)
T ss_pred             CCceeccceEEEeecCCCCcEEEeecceEEEEEeccCcCCCCccCCcccccccc
Confidence            356777665555543 121   11224678999999999999999999987653

>COG3369 Zinc finger domain containing protein (CDGSH-type) [Function unknown]

Probab=98.63  E-value=1.7e-08  Score=79.04  Aligned_cols=27  Identities=41%  Similarity=0.811  Sum_probs=23.6

Q ss_pred             CcceEEeecCCCCCCCCCCcccccCcc
Q psy4888         147 ADTLALCRCWRSKTFPKCDGSHAQHNQ  173 (273)
Q Consensus       147 g~~y~~CrCGrSk~~PfCDGSH~~~nk  173 (273)
                      ...+++||||.|.|.|||||+|.+..+
T Consensus        28 ~~~~~LCrCG~S~NKPfCDGtH~k~gf   54 (78)
T COG3369          28 DEQAALCRCGHSENKPFCDGTHKKTGF   54 (78)
T ss_pred             ceEEEEEeccCcCCCCccCCccccccc
Confidence            367999999999999999999997443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	273
3fnv_A	83	Crystal Structure Of Miner1: The Redox-Active 2fe-2		1e-14
2qd0_A	81	Crystal Structure Of Mitoneet Length = 81		4e-13
2qd0_A	81	Crystal Structure Of Mitoneet Length = 81		8e-11
3ree_A	84	Crystal Structure Of Mitoneet Length = 84		4e-13
3ree_A	84	Crystal Structure Of Mitoneet Length = 84		1e-10
3ew0_A	80	The Novel 2fe-2s Outer Mitochondrial Protein Mitone		5e-13
3ew0_A	80	The Novel 2fe-2s Outer Mitochondrial Protein Mitone		8e-11
2qh7_A	76	Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochon		5e-13
2qh7_A	76	Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochon		9e-11
2r13_A	79	Crystal Structure Of Human Mitoneet Reveals A Novel		5e-13
2r13_A	79	Crystal Structure Of Human Mitoneet Reveals A Novel		9e-11
4f2c_A	76	The Crystal Structure Of A Human Mitoneet Double Mu		1e-12
4f2c_A	76	The Crystal Structure Of A Human Mitoneet Double Mu		9e-11
4f28_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-12
4f28_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-10
4ezf_A	77	The Crystal Structure Of A Human Mitoneet Mutant Wi		3e-12
4ezf_A	77	The Crystal Structure Of A Human Mitoneet Mutant Wi		1e-10
4f1e_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		3e-12
4f1e_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		9e-11
3lpq_A	79	Human Mitoneet With 2fe-2s Coordinating Ligand His		1e-11
3lpq_A	79	Human Mitoneet With 2fe-2s Coordinating Ligand His		2e-09
3s2q_A	83	The Crystal Structure Of At5g51720 (At-Neet) Length		4e-10
3s2q_A	83	The Crystal Structure Of At5g51720 (At-Neet) Length		3e-09
3s2r_A	83	Atchloroneet (H87c Mutant) Length = 83		9e-09
3s2r_A	83	Atchloroneet (H87c Mutant) Length = 83		5e-08

>pdb|3FNV|A Chain A, Crystal Structure Of Miner1: The Redox-Active 2fe-2s Protein Causative In Wolfram Syndrome 2 Length = 83

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 126 FNPNIQKSNSKVVNVINIEDIADT-LALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
            N  IQK N KVVN INIED++ T  A CRCWRSKTFP CDGSH +HN+ TGDN
Sbjct: 19  INLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN 72

>pdb|2QD0|A Chain A, Crystal Structure Of Mitoneet Length = 81

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 13  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 68

>pdb|2QD0|A Chain A, Crystal Structure Of Mitoneet Length = 81

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II
Sbjct: 16  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 74

>pdb|3REE|A Chain A, Crystal Structure Of Mitoneet Length = 84

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 11  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 66

>pdb|3REE|A Chain A, Crystal Structure Of Mitoneet Length = 84

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II
Sbjct: 14  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 72

>pdb|3EW0|A Chain A, The Novel 2fe-2s Outer Mitochondrial Protein Mitoneet Displays Conformational Flexibility In Its N-Terminal Cytoplasmic Tethering Domain Length = 80

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 14  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 69

>pdb|3EW0|A Chain A, The Novel 2fe-2s Outer Mitochondrial Protein Mitoneet Displays Conformational Flexibility In Its N-Terminal Cytoplasmic Tethering Domain Length = 80

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II
Sbjct: 17  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 75

>pdb|2QH7|A Chain A, Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochondrial Membrane Protein Stabilized By Pioglitazone Length = 76

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 65

>pdb|2QH7|A Chain A, Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochondrial Membrane Protein Stabilized By Pioglitazone Length = 76

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIIS 239
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II 
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 72

>pdb|2R13|A Chain A, Crystal Structure Of Human Mitoneet Reveals A Novel [2fe- 2s] Cluster Coordination Length = 79

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 13  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 68

>pdb|2R13|A Chain A, Crystal Structure Of Human Mitoneet Reveals A Novel [2fe- 2s] Cluster Coordination Length = 79

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II
Sbjct: 16  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 74

>pdb|4F2C|A Chain A, The Crystal Structure Of A Human Mitoneet Double Mutant In Which Gly 66 Are Asp 67 Are Both Replaced With Ala Residues Length = 76

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+A     CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLAAKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 65

>pdb|4F2C|A Chain A, The Crystal Structure Of A Human Mitoneet Double Mutant In Which Gly 66 Are Asp 67 Are Both Replaced With Ala Residues Length = 76

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIIS 239
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II 
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLAAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 72

>pdb|4F28|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Met 62 Replaced By A Gly Length = 76

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  + ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 10  KAMINLHIQKDNPKIVHAFDGEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 65

>pdb|4F28|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Met 62 Replaced By A Gly Length = 76

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 33/60 (55%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIIS 239
           +N H+ K    + + F         V CRCW SKKFP CDGAH  HNE   DN+GP II 
Sbjct: 13  INLHIQKDNPKIVHAFDGEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 72

>pdb|4EZF|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With An Ala Inserted Between Asp 67 And Lys 68 Length = 77

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLAL-CRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D  A+ CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 66

>pdb|4EZF|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With An Ala Inserted Between Asp 67 And Lys 68 Length = 77

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 180 VNKHLYKSEDVVTNRFTVFP-SDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +    D   V CRCW SKKFP CDGAH  HNE   DN+GP II
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLII 72
Query: 239 S 239
Sbjct: 73  K 73

>pdb|4F1E|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Asp 67 Replaced By A Gly Length = 76

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+      CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGGKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 65

>pdb|4F1E|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Asp 67 Replaced By A Gly Length = 76

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIIS 239
           +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+GP II 
Sbjct: 13  INLHIQKDNPKIVHAFDMEDLGGKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 72

>pdb|3LPQ|A Chain A, Human Mitoneet With 2fe-2s Coordinating Ligand His 87 Replaced With Cys Length = 79

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           +   N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+  +HN+ TGDN
Sbjct: 14  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGACTKHNEETGDN 69

>pdb|3LPQ|A Chain A, Human Mitoneet With 2fe-2s Coordinating Ligand His 87 Replaced With Cys Length = 79

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 180 VNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII 238
           +N H+ K    + + F +       V CRCW SKKFP CDGA   HNE   DN+GP II
Sbjct: 17  INLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGACTKHNEETGDNVGPLII 75

>pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) Length = 83

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 126 FNPNIQKSNSKVVNVINIEDIADTLA-LCRCWRSKTFPKCDGSHAQHNQCTGDN 178
            NP I+K+  KVV+ + + +++  +   CRCWRS TFP CDGSH +HN+  GDN
Sbjct: 21  INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDN 74

>pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) Length = 83

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 166 GSHAQHNQ------CTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLV-LCRCWESKKFPLC 218
           GSH +  Q        G   +N  + K+ED V +   V      +   CRCW S  FPLC
Sbjct: 1   GSHMRKQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLC 60
Query: 219 DGAHRAHNERNKDNIGPAII 238
           DG+H  HN+ N DN+GP ++
Sbjct: 61  DGSHVKHNKANGDNVGPLLL 80

>pdb|3S2R|A Chain A, Atchloroneet (H87c Mutant) Length = 83

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 126 FNPNIQKSNSKVVNVINIEDIADTLA-LCRCWRSKTFPKCDGSHAQHNQCTGDN 178
            NP I+K+  KVV+ + + +++  +   CRCWRS TFP CDGS  +HN+  GDN
Sbjct: 21  INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDN 74

>pdb|3S2R|A Chain A, Atchloroneet (H87c Mutant) Length = 83

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 166 GSHAQHNQ------CTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLV-LCRCWESKKFPLC 218
           GSH +  Q        G   +N  + K+ED V +   V      +   CRCW S  FPLC
Sbjct: 1   GSHMRKQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLC 60
Query: 219 DGAHRAHNERNKDNIGPAII 238
           DG+   HN+ N DN+GP ++
Sbjct: 61  DGSCVKHNKANGDNVGPLLL 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	273
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	2e-19
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	9e-15
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	2e-17
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	4e-14
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	3e-17
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	4e-13
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	3e-06
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	5e-04
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	9e-06
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	3e-05
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	1e-04
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	9e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A Length = 80

 Score = 79.4 bits (195), Expect = 2e-19
 Identities = 29/52 (55%), Positives = 38/52 (73%)

Query: 127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           N +IQK N K+V+  ++ED+ D    CRCWRSK FP CDG+H +HN+ TGDN
Sbjct: 18  NLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDN 69

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A Length = 80

 Score = 67.1 bits (163), Expect = 9e-15
 Identities = 28/66 (42%), Positives = 34/66 (51%)

Query: 174 CTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNI 233
                 +N H+ K    + + F +       V CRCW SKKFP CDGAH  HNE   DN+
Sbjct: 11  HRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNV 70

Query: 234 GPAIIS 239
           GP II 
Sbjct: 71  GPLIIK 76

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A Length = 83

 Score = 74.4 bits (182), Expect = 2e-17
 Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 127 NPNIQKSNSKVVNVINIEDIADTLA-LCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           NP I+K+  KVV+ + + +++  +   CRCWRS TFP CDGS  +HN+  GDN
Sbjct: 22  NPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDN 74

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A Length = 83

 Score = 65.2 bits (158), Expect = 4e-14
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 173 QCTGDNRVNKHLYKSEDVVTNRFTVFP-SDPPLVLCRCWESKKFPLCDGAHRAHNERNKD 231
           +  G   +N  + K+ED V +   V   S      CRCW S  FPLCDG+   HN+ N D
Sbjct: 14  RAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGD 73

Query: 232 NIGPAII 238
           N+GP ++
Sbjct: 74  NVGPLLL 80

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens} Length = 83

 Score = 73.6 bits (180), Expect = 3e-17
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)

Query: 127 NPNIQKSNSKVVNVINIEDIA-DTLALCRCWRSKTFPKCDGSHAQHNQCTGDN 178
           N  IQK N KVVN INIED++    A CRCWRSKTFP CDGSH +HN+ TGDN
Sbjct: 20  NLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN 72

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens} Length = 83

 Score = 62.8 bits (152), Expect = 4e-13
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 173 QCTGDNRVNKHLYKSEDVVTNRFTVFP-SDPPLVLCRCWESKKFPLCDGAHRAHNERNKD 231
           +   D+ +N  + K    V N   +   S      CRCW SK FP CDG+H  HNE   D
Sbjct: 12  KQQKDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGD 71

Query: 232 NIGPAIIS 239
           N+GP I+ 
Sbjct: 72  NVGPLILK 79

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum} Length = 87

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 18/77 (23%)

Query: 147 ADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVL 206
             T   C C RSK  P CDGSH           +    Y  +   T  F           
Sbjct: 27  GKTYHWCACGRSKAQPFCDGSHKGTG-------LAPVAYTPDKAGTAYF----------- 68

Query: 207 CRCWESKKFPLCDGAHR 223
           C C  SK  PLCDG H+
Sbjct: 69  CGCKASKAPPLCDGTHK 85

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum} Length = 87

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 7/87 (8%)

Query: 90  GHINPNIQKSNSKVVN----VINIEDIADTLALCRCWRMYFNPNIQKSNSKV--VNVINI 143
           G  + +   ++  +       + +E    T   C C R    P    S+       V   
Sbjct: 1   GSSHHHHHHTDPVIAQKAPYPVTVEA-GKTYHWCACGRSKAQPFCDGSHKGTGLAPVAYT 59

Query: 144 EDIADTLALCRCWRSKTFPKCDGSHAQ 170
            D A T   C C  SK  P CDG+H  
Sbjct: 60  PDKAGTAYFCGCKASKAPPLCDGTHKT 86

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum} Length = 69

 Score = 41.8 bits (98), Expect = 9e-06
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 143 IEDIADTLALCRCWRSKTFPKCDGSHAQ 170
           +        LCRC  S   P CDGSH +
Sbjct: 34  LPVEQGQAWLCRCGHSLNKPFCDGSHKR 61

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum} Length = 69

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 196 TVFPSDPPLVLCRCWESKKFPLCDGAHR 223
            +        LCRC  S   P CDG+H+
Sbjct: 33  ELPVEQGQAWLCRCGHSLNKPFCDGSHK 60

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis} Length = 60

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 IEDIADTLALCRCWRSKTFPKCDGSHA 169
           ++     + LCRC  S + P CDG+HA
Sbjct: 15  VKIGGRAIYLCRCGHSGSKPHCDGTHA 41

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis} Length = 60

 Score = 36.1 bits (83), Expect = 9e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 195 FTVFPSDPPLVLCRCWESKKFPLCDGAHR 223
           + V      + LCRC  S   P CDG H 
Sbjct: 13  YEVKIGGRAIYLCRCGHSGSKPHCDGTHA 41

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 47/329 (14%), Positives = 85/329 (25%), Gaps = 130/329 (39%)

Query: 52  GIRKKVDAKSLADFVKYVPYALVLGGISYGVY-----KVISPKG----------HINPNI 96
           G  K   A  +    K      V   + + ++        SP+            I+PN 
Sbjct: 160 GSGKTWVALDVCLSYK------VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 97  QKSNSKVVNV-INIEDIADTLALCRCWRMYFNP-----NIQKSNSKVVNVINIE------ 144
              +    N+ + I  I   L      + Y N      N+Q  N+K  N  N+       
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ--NAKAWNAFNLSCKILLT 271

Query: 145 ----DIAD-----------------------TLALCRCW---RSKTFPK--CDGS----- 167
                + D                         +L   +   R +  P+     +     
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331

Query: 168 ----HAQHNQCTGDN--RVN--------------------KHLYKSEDVVTNRFTVFPSD 201
                 +    T DN   VN                    + ++          +VFP  
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR-------LSVFPPS 384

Query: 202 ---PPLVLCRCWESKKFPLC-DGAHRAHN----ERNKDNIGPAIISASNKHNLYMNDTSG 253
              P ++L   W            ++ H     E+          S  +  ++Y+ +   
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE------STISIPSIYL-ELKV 437

Query: 254 NETNVA--HAN--------ENWDSDDKKK 272
              N    H +        + +DSDD   
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIP 466

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	273
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.95
4ezf_A	77	Mitoneet, CDGSH iron-sulfur domain-containing prot	99.91
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	99.91
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	99.88
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	99.85
4ezf_A	77	Mitoneet, CDGSH iron-sulfur domain-containing prot	99.67
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	99.66
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.63
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	99.62
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	99.56
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	99.42
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	99.36
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	99.18
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	99.06

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.95  E-value=2.9e-28  Score=191.41  Aligned_cols=78  Identities=35%  Similarity=0.577  Sum_probs=71.2

Q ss_pred             ccccccccCceeEEeeecccCCcceEEeecCCCCCCCCCCcccccCccccCCCcccceeeeccceeccceeecCCCCcEE
Q psy4888         126 FNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLV  205 (273)
Q Consensus       126 vnp~I~k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE~~V~~~g~v~~~~~~~~  205 (273)
                      ..|.|+..+|++|++.    .|++|+||+||+|+++|||||||.      +.++.|++|+.++            +++++
T Consensus        10 ~~~~~~~~~P~~v~le----~g~~~~~C~CG~S~~~PfCDGSH~------~~~f~P~~f~~e~------------~~~~~   67 (87)
T 3tbn_A           10 TDPVIAQKAPYPVTVE----AGKTYHWCACGRSKAQPFCDGSHK------GTGLAPVAYTPDK------------AGTAY   67 (87)
T ss_dssp             TSCCCSCSSCEEEEEC----TTCCEEECSSSCCSSTTBCCSTTT------TTTCCCEEECCSS------------CEEEE
T ss_pred             CCcccccCCCEEEEeC----CCCEEEEeeCCCCCCCCCcCCccc------cCCccceEEEECC------------CcEEE
Confidence            5688999999999984    789999999999999999999998      4789999999877            57899


Q ss_pred             EEecCCCCCCCcccCCCccC
Q psy4888         206 LCRCWESKKFPLCDGAHRAH  225 (273)
Q Consensus       206 lC~Cg~S~n~PfCDGSH~~~  225 (273)
                      ||+||+|+|.|||||||+.+
T Consensus        68 lC~CK~T~n~PfCDGsH~~L   87 (87)
T 3tbn_A           68 FCGCKASKAPPLCDGTHKTL   87 (87)
T ss_dssp             ECSSSCCSSTTBCCSGGGTC
T ss_pred             EecCCCCCCCCccCCcCCcC
Confidence            99999999999999999863

>4ezf_A Mitoneet, CDGSH iron-sulfur domain-containing protein 1; 2Fe-2S proteins, membrane, mitochondrion, signal-anchor, transmembrane; 1.19A {Homo sapiens} PDB: 2qd0_A 3ree_A 2r13_A 3ew0_A 2qh7_A 4f1e_A 4f2c_A 4f28_A 3lpq_A

Probab=99.91  E-value=8.4e-26  Score=173.64  Aligned_cols=66  Identities=47%  Similarity=0.862  Sum_probs=63.9

Q ss_pred             cccccccccccCceeEEeeecccCCc-ceEEeecCCCCCCCCCCcccccCccccCCCcccceeeecc
Q psy4888         123 RMYFNPNIQKSNSKVVNVINIEDIAD-TLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSE  188 (273)
Q Consensus       123 ~~~vnp~I~k~~PkvV~~~diEd~g~-~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE  188 (273)
                      ++++|+.|++++|++|+.+||||.|+ +++|||||+|++||||||||.+||+++|+|++||+|+.++
T Consensus        10 ~~~vN~~i~kd~pKVVd~~diEdl~~~k~~~CrC~~Sk~~PfCDGsH~~hn~etGdnvgPl~~~~k~   76 (77)
T 4ezf_A           10 KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKE   76 (77)
T ss_dssp             TTCSCSSSCTTSSSEEEEEESBTTSCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECBC
T ss_pred             ccccccceecCCCcEeeccchhhcCCccEEEEeCCCCCCCCccCCchhhhccccCCCccCeEEEecc
Confidence            88999999999999999999999998 9999999999999999999999999999999999999765

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens}

Probab=99.91  E-value=6.4e-26  Score=176.38  Aligned_cols=66  Identities=59%  Similarity=0.908  Sum_probs=63.4

Q ss_pred             cccccccccccCceeEEeeecccCC-cceEEeecCCCCCCCCCCcccccCccccCCCcccceeeecc
Q psy4888         123 RMYFNPNIQKSNSKVVNVINIEDIA-DTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSE  188 (273)
Q Consensus       123 ~~~vnp~I~k~~PkvV~~~diEd~g-~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE  188 (273)
                      ++++|+.|++++|++|+.+||||.+ ++++|||||+|+++|||||||.+||+++|+|++||+++.++
T Consensus        16 ~~~vN~~I~k~~pKvVd~~diedl~~~k~~~CrC~~S~~~PfCDGsH~~~n~etGdnvgPli~~~k~   82 (83)
T 3fnv_A           16 DSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKKE   82 (83)
T ss_dssp             CCCSCSSSCTTSSSEEEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECCC
T ss_pred             ccccCcceecCCCcEeeeechhhccCCCEEEEeCCCCCCCCccCchhhhcccccCCccCCeEEEecc
Confidence            5899999999999999999999999 89999999999999999999999999999999999998764

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A

Probab=99.88  E-value=2.8e-24  Score=167.03  Aligned_cols=64  Identities=42%  Similarity=0.773  Sum_probs=60.1

Q ss_pred             cccccccccccCceeEEeeecccCC-cceEEeecCCCCCCCCCCcccccCccccCCCcccceeee
Q psy4888         123 RMYFNPNIQKSNSKVVNVINIEDIA-DTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYK  186 (273)
Q Consensus       123 ~~~vnp~I~k~~PkvV~~~diEd~g-~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKk  186 (273)
                      .+++|+.|+++.|++||.+||||.+ ++++|||||+|++||||||||.+||+++|+|++|+++++
T Consensus        18 g~~vN~~I~K~~~KVVD~vdiedl~~~~~~~CrC~~Sk~~P~CDGSH~k~n~etGdNvgPlivkk   82 (83)
T 3s2r_A           18 GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLLKK   82 (83)
T ss_dssp             --CCCSSTTTTSSSCCEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHTCCEEEEEEEC
T ss_pred             cCccCchhhcCCCceecccchhhccCCceEEEecCCCCCCCccCchhHHHhhhcCCCcCCeEEec
Confidence            3689999999999999999999999 699999999999999999999999999999999999975

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A

Probab=99.85  E-value=2e-22  Score=156.25  Aligned_cols=66  Identities=47%  Similarity=0.862  Sum_probs=62.9

Q ss_pred             cccccccccccCceeEEeeecccCCcceEEeecCCCCCCCCCCcccccCccccCCCcccceeeecc
Q psy4888         123 RMYFNPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQHNQCTGDNRVNKHLYKSE  188 (273)
Q Consensus       123 ~~~vnp~I~k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~~nk~TgDn~GPLkVKkEE  188 (273)
                      ++++|..|++++|++|+.+++||.+++|+|||||+|+++|||||||.++++++|+|++||+|+.++
T Consensus        14 ~~~vni~I~k~gP~~V~~~~led~~~~~~~C~Cg~S~~~PfCDGsH~~~~~etgdnvgPl~~~~~~   79 (80)
T 3ew0_A           14 KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKE   79 (80)
T ss_dssp             CCCSCSSSCTTSSSEEEEECGGGCCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCCCCEEEECCC
T ss_pred             CCccCeEEeCCCCEEEEeeccccCCCeEEEeeCCCCCCCcccCCccCCcCcccCCCcCCEEEEecc
Confidence            778999999999999999999999999999999999999999999999999999999999998753

>4ezf_A Mitoneet, CDGSH iron-sulfur domain-containing protein 1; 2Fe-2S proteins, membrane, mitochondrion, signal-anchor, transmembrane; 1.19A {Homo sapiens} PDB: 2qd0_A 3ree_A 2r13_A 3ew0_A 2qh7_A 4f1e_A 4f2c_A 4f28_A 3lpq_A

Probab=99.67  E-value=9.5e-18  Score=129.02  Aligned_cols=66  Identities=42%  Similarity=0.827  Sum_probs=61.1

Q ss_pred             CCcccceeeeccceeccceeecCCCC-cEEEEecCCCCCCCcccCCCccCccCCCCCccceeEEEec
Q psy4888         177 DNRVNKHLYKSEDVVTNRFTVFPSDP-PLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASN  242 (273)
Q Consensus       177 Dn~GPLkVKkEE~~V~~~g~v~~~~~-~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~~ek  242 (273)
                      ....++.|+++.++|.+.+++++.++ .++||+||+|+++|||||||.+++++++++++|++|+..+
T Consensus        10 ~~~vN~~i~kd~pKVVd~~diEdl~~~k~~~CrC~~Sk~~PfCDGsH~~hn~etGdnvgPl~~~~k~   76 (77)
T 4ezf_A           10 KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKE   76 (77)
T ss_dssp             TTCSCSSSCTTSSSEEEEEESBTTSCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECBC
T ss_pred             ccccccceecCCCcEeeccchhhcCCccEEEEeCCCCCCCCccCCchhhhccccCCCccCeEEEecc
Confidence            55788899999999999999999887 9999999999999999999999999999999999997654

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens}

Probab=99.66  E-value=9.2e-18  Score=130.64  Aligned_cols=76  Identities=36%  Similarity=0.650  Sum_probs=60.1

Q ss_pred             CCCCCCcccccCccccCCCcccceeeeccceeccceeecCCC-CcEEEEecCCCCCCCcccCCCccCccCCCCCccceeE
Q psy4888         160 TFPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSD-PPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAII  238 (273)
Q Consensus       160 ~~PfCDGSH~~~nk~TgDn~GPLkVKkEE~~V~~~g~v~~~~-~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~  238 (273)
                      -++||...|..     .+...++.|+++.++|.+++++++.+ +.++||+||+|+++|||||||+++++++++|++|++|
T Consensus         4 y~~~~~~~~~~-----k~~~vN~~I~k~~pKvVd~~diedl~~~k~~~CrC~~S~~~PfCDGsH~~~n~etGdnvgPli~   78 (83)
T 3fnv_A            4 MRPFLPKKKQQ-----KDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL   78 (83)
T ss_dssp             -----------------CCCSCSSSCTTSSSEEEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEE
T ss_pred             chhhccccccC-----cccccCcceecCCCcEeeeechhhccCCCEEEEeCCCCCCCCccCchhhhcccccCCccCCeEE
Confidence            35777766542     35678999999999999999999987 8999999999999999999999999999999999999


Q ss_pred             EE
Q psy4888         239 SA  240 (273)
Q Consensus       239 ~~  240 (273)
                      +.
T Consensus        79 ~~   80 (83)
T 3fnv_A           79 KK   80 (83)
T ss_dssp             EC
T ss_pred             Ee
Confidence            64

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.63  E-value=3.2e-16  Score=123.13  Aligned_cols=63  Identities=19%  Similarity=0.401  Sum_probs=54.0

Q ss_pred             CccccCCCcccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCccCccCCCCCccceeEEEeccceEEecC
Q psy4888         171 HNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISASNKHNLYMND  250 (273)
Q Consensus       171 ~nk~TgDn~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~~ek~~~v~lC~  250 (273)
                      |........+|+.|+.++            +.+|+||+||+|+|+|||||||+..      +..|+.|+++++++||||.
T Consensus         9 ~~~~~~~~~~P~~v~le~------------g~~~~~C~CG~S~~~PfCDGSH~~~------~f~P~~f~~e~~~~~~lC~   70 (87)
T 3tbn_A            9 HTDPVIAQKAPYPVTVEA------------GKTYHWCACGRSKAQPFCDGSHKGT------GLAPVAYTPDKAGTAYFCG   70 (87)
T ss_dssp             TTSCCCSCSSCEEEEECT------------TCCEEECSSSCCSSTTBCCSTTTTT------TCCCEEECCSSCEEEEECS
T ss_pred             cCCcccccCCCEEEEeCC------------CCEEEEeeCCCCCCCCCcCCccccC------CccceEEEECCCcEEEEec
Confidence            334445667898888765            6789999999999999999999984      6789999999999999999


Q ss_pred             C
Q psy4888         251 T  251 (273)
Q Consensus       251 ~  251 (273)
                      |
T Consensus        71 C   71 (87)
T 3tbn_A           71 C   71 (87)
T ss_dssp             S
T ss_pred             C
Confidence            6

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A

Probab=99.62  E-value=6.4e-17  Score=125.41  Aligned_cols=76  Identities=38%  Similarity=0.716  Sum_probs=58.6

Q ss_pred             CCCCCcccccCccccCCCcccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCccCccCCCCCccceeEEE
Q psy4888         161 FPKCDGSHAQHNQCTGDNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIISA  240 (273)
Q Consensus       161 ~PfCDGSH~~~nk~TgDn~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~~  240 (273)
                      .+||...+..      ....++.|..+.+++...+++++.++.++||+||+|+++|||||||+..+.+++++++|++|+.
T Consensus         4 ~~~~~~~~~~------~~~vni~I~k~gP~~V~~~~led~~~~~~~C~Cg~S~~~PfCDGsH~~~~~etgdnvgPl~~~~   77 (80)
T 3ew0_A            4 MRFYVKDHRN------KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKK   77 (80)
T ss_dssp             CCCCCCCCCC------CCCSCSSSCTTSSSEEEEECGGGCCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCCCCEEEEC
T ss_pred             ccccccccCC------CCccCeEEeCCCCEEEEeeccccCCCeEEEeeCCCCCCCcccCCccCCcCcccCCCcCCEEEEe
Confidence            5677665442      2234555555555555556666667899999999999999999999999999999999999987


Q ss_pred             ec
Q psy4888         241 SN  242 (273)
Q Consensus       241 ek  242 (273)
                      .+
T Consensus        78 ~~   79 (80)
T 3ew0_A           78 KE   79 (80)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A

Probab=99.56  E-value=2.5e-16  Score=122.45  Aligned_cols=62  Identities=39%  Similarity=0.761  Sum_probs=57.1

Q ss_pred             CcccceeeeccceeccceeecCCC-CcEEEEecCCCCCCCcccCCCccCccCCCCCccceeEE
Q psy4888         178 NRVNKHLYKSEDVVTNRFTVFPSD-PPLVLCRCWESKKFPLCDGAHRAHNERNKDNIGPAIIS  239 (273)
Q Consensus       178 n~GPLkVKkEE~~V~~~g~v~~~~-~~~~lC~Cg~S~n~PfCDGSH~~~~~~~~d~~~P~~~~  239 (273)
                      ...++.|++++++|.+++++++.+ +.++||+||+|+++|||||||.++++++++|++|++++
T Consensus        19 ~~vN~~I~K~~~KVVD~vdiedl~~~~~~~CrC~~Sk~~P~CDGSH~k~n~etGdNvgPlivk   81 (83)
T 3s2r_A           19 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLLK   81 (83)
T ss_dssp             -CCCSSTTTTSSSCCEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHTCCEEEEEEE
T ss_pred             CccCchhhcCCCceecccchhhccCCceEEEecCCCCCCCccCchhHHHhhhcCCCcCCeEEe
Confidence            467788899999999999999977 79999999999999999999999999999999999986

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}

Probab=99.42  E-value=3.6e-14  Score=107.27  Aligned_cols=53  Identities=30%  Similarity=0.442  Sum_probs=47.0

Q ss_pred             CCCcccceeeeccceeccceeecC-CCCcEEEEecCCCCCCCcccCCCccCccC
Q psy4888         176 GDNRVNKHLYKSEDVVTNRFTVFP-SDPPLVLCRCWESKKFPLCDGAHRAHNER  228 (273)
Q Consensus       176 gDn~GPLkVKkEE~~V~~~g~v~~-~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~  228 (273)
                      ....||+.|+++.++++.+|..+. ++..++||+||+|+|+|||||||+....+
T Consensus        12 v~~nGPl~V~G~v~i~~~dG~~~~~~~~~~~lC~Cg~S~n~PfCDGsH~~~~f~   65 (69)
T 3tbm_A           12 ARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFD   65 (69)
T ss_dssp             ECTTSCEEEESSCEEEESSCCEECCBTTEEEECCSSCCSSTTBCCSHHHHTTCC
T ss_pred             EeCCCCEEEECCCeEECCCCCEEeeCCCEEEEeeCCCCCCCCccCCCcCCCCcc
Confidence            455699999999999999999877 67899999999999999999999876543

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}

Probab=99.36  E-value=1.7e-13  Score=101.22  Aligned_cols=39  Identities=31%  Similarity=0.590  Sum_probs=32.1

Q ss_pred             cccccccCceeEEeeecccCCcceEEeecCCCCCCCCCCccccc
Q psy4888         127 NPNIQKSNSKVVNVINIEDIADTLALCRCWRSKTFPKCDGSHAQ  170 (273)
Q Consensus       127 np~I~k~~PkvV~~~diEd~g~~y~~CrCGrSk~~PfCDGSH~~  170 (273)
                      ...+.+++|+.|++     .+++|+||+||+|+++|||||||..
T Consensus         4 ~I~v~~ngP~~v~~-----e~~~~~lC~CG~S~n~PFCDGSHk~   42 (60)
T 3tbo_A            4 EIRAIENGPYEVKI-----GGRAIYLCRCGHSGSKPHCDGTHAK   42 (60)
T ss_dssp             EEEECTTSCEEEEC--------CEEECCSSCCTTTTBCCSHHHH
T ss_pred             EEEEeCCCCEEEEE-----CCcEEEEEECCCCCCCCccCCcCCC
Confidence            34678999999985     3578899999999999999999985

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}

Probab=99.18  E-value=5.3e-12  Score=93.33  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=29.8

Q ss_pred             CCcccceeeeccceeccceeecCCCCcEEEEecCCCCCCCcccCCCccCccC
Q psy4888         177 DNRVNKHLYKSEDVVTNRFTVFPSDPPLVLCRCWESKKFPLCDGAHRAHNER  228 (273)
Q Consensus       177 Dn~GPLkVKkEE~~V~~~g~v~~~~~~~~lC~Cg~S~n~PfCDGSH~~~~~~  228 (273)
                      ...+|+.|+.+             ++.++||+||+|+|+|||||||+....+
T Consensus         8 ~~ngP~~v~~e-------------~~~~~lC~CG~S~n~PFCDGSHk~~~f~   46 (60)
T 3tbo_A            8 IENGPYEVKIG-------------GRAIYLCRCGHSGSKPHCDGTHAKVGFK   46 (60)
T ss_dssp             CTTSCEEEEC----------------CEEECCSSCCTTTTBCCSHHHHHTCC
T ss_pred             eCCCCEEEEEC-------------CcEEEEEECCCCCCCCccCCcCCCCccc
Confidence            34578888632             3567999999999999999999876543

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}

Probab=99.06  E-value=4.3e-11  Score=90.44  Aligned_cols=44  Identities=27%  Similarity=0.382  Sum_probs=33.3

Q ss_pred             cccccccCceeEEe-eecc--------cCCcceEEeecCCCCCCCCCCccccc
Q psy4888         127 NPNIQKSNSKVVNV-INIE--------DIADTLALCRCWRSKTFPKCDGSHAQ  170 (273)
Q Consensus       127 np~I~k~~PkvV~~-~diE--------d~g~~y~~CrCGrSk~~PfCDGSH~~  170 (273)
                      ...+..++|+.|.. +.|+        ..+.+|+|||||+|+++|||||||..
T Consensus         9 ~I~v~~nGPl~V~G~v~i~~~dG~~~~~~~~~~~lC~Cg~S~n~PfCDGsH~~   61 (69)
T 3tbm_A            9 VITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKR   61 (69)
T ss_dssp             EEEECTTSCEEEESSCEEEESSCCEECCBTTEEEECCSSCCSSTTBCCSHHHH
T ss_pred             EEEEeCCCCEEEECCCeEECCCCCEEeeCCCEEEEeeCCCCCCCCccCCCcCC
Confidence            45667788888874 1121        13467999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00