Psyllid ID: psy4889

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MNFKEKNLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGKVTGTPGQVPLSGLPDEHRRYQVDLTGGPD
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccccEEEEEccccccccEEEEEEccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccHHHccccccEEcccccHHHccccEEEEEEcccccccccccccHHHccccccccccEEEEEEcccccccccccccccccccEEEEEcccccc
Coil and Loop (DISEMBL)
MNFKEKNLAKEIEEvsftsnkptnlgtwfICKThckklvnpnqkknqsraVVDYAIIDdmkdknaycrcwrskkfplcdgahlhhnnrtgdnvgpllikdgkvtgtpgqvplsglpdehrryqvdltggpd
Flexible Loop (DISEMBL)
mnfkeknlAKEIeevsftsnkptnlgTWFICKTHCKKlvnpnqkknqsraVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHhnnrtgdnvgPLLIKDGKVTGTpgqvplsglpdehrryqvdltggpd
Low Complexity Region (SEG)
MNFKEKNLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGKVTGTPGQVPLSGLPDEHRRYQVDLTGGPD
Disordered region (IsUnstruct)
**********************TNLGTWFICKTHCKKLVNPN****QSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDG******************************
Disordered Region (DISOPRED)
******NLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPL*****************GLPDEHRRYQVDL*****
Disordered Region (DISEMBL)
MNFKEKNLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGKVTGTPGQVPLSGLPDEHRRYQVDLTGGPD
Disordered Region (DISPRO)
MNFKEKNLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGKV**TPGQVPLSGLPDEHRRYQVDLTG***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNFKEKNLAKEIEEVSFTSNKPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGKVTGTPGQVPLSGLPDEHRRYQVDLTGGPD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
Q3ZBU2	106	CDGSH iron-sulfur domain-	yes	N/A	0.534	0.660	0.555	5e-16
B0K020	108	CDGSH iron-sulfur domain-	yes	N/A	0.511	0.620	0.529	1e-15
Q91WS0	108	CDGSH iron-sulfur domain-	yes	N/A	0.480	0.583	0.562	2e-15
Q9NZ45	108	CDGSH iron-sulfur domain-	yes	N/A	0.480	0.583	0.546	8e-15
C3ZWH9	131	CDGSH iron-sulfur domain-	yes	N/A	0.473	0.473	0.587	1e-14
C4A0P0	131	CDGSH iron-sulfur domain-	yes	N/A	0.473	0.473	0.587	1e-14
B4MBU8	133	CDGSH iron-sulfur domain-	N/A	N/A	0.465	0.458	0.516	3e-13
B3M1H7	134	CDGSH iron-sulfur domain-	N/A	N/A	0.442	0.432	0.517	8e-13
Q6PCF8	135	CDGSH iron-sulfur domain-	N/A	N/A	0.503	0.488	0.515	8e-13
Q5I027	135	CDGSH iron-sulfur domain-	no	N/A	0.503	0.488	0.515	8e-13

>sp|Q3ZBU2|CISD1_BOVIN CDGSH iron-sulfur domain-containing protein 1 OS=Bos taurus GN=CISD1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F  K H  K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 32  FYVKDHRNKSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 90

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 91  ETGDNVGPLIIK 102

Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation. May be involved in Fe-S cluster shuttling and/or in redox reactions.
Bos taurus (taxid: 9913)

>sp|B0K020|CISD1_RAT CDGSH iron-sulfur domain-containing protein 1 OS=Rattus norvegicus GN=Cisd1 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 32  KTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGD 91
           ++  K +VN   +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH+ HN  TGD
Sbjct: 38  ESRTKAMVNLQIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHIKHNEETGD 96

Query: 92  NVGPLLIK 99
           NVGPL+IK
Sbjct: 97  NVGPLIIK 104

Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation (By similarity). May be involved in Fe-S cluster shuttling and/or in redox reactions.

Rattus norvegicus (taxid: 10116)

>sp|Q91WS0|CISD1_MOUSE CDGSH iron-sulfur domain-containing protein 1 OS=Mus musculus GN=Cisd1 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 36  KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
           K +VN   +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH+ HN  TGDNVGP
Sbjct: 42  KAMVNLQIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHIKHNEETGDNVGP 100

Query: 96  LLIK 99
           L+IK
Sbjct: 101 LIIK 104

Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation. May be involved in Fe-S cluster shuttling and/or in redox reactions.

Mus musculus (taxid: 10090)

>sp|Q9NZ45|CISD1_HUMAN CDGSH iron-sulfur domain-containing protein 1 OS=Homo sapiens GN=CISD1 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 36  KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
           K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 42  KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 100

Query: 96  LLIK 99
           L+IK
Sbjct: 101 LIIK 104

Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation (By similarity). May be involved in Fe-S cluster shuttling and/or in redox reactions.

Homo sapiens (taxid: 9606)

>sp|C3ZWH9|CID2A_BRAFL CDGSH iron-sulfur domain-containing protein 2 homolog A OS=Branchiostoma floridae GN=BRAFLDRAFT_285975 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)

Query: 37  KLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPL 96
           +LVN   +K  S+ VV+   I+D+ +K  YCRCWRSKKFPLCDG+H  HN  TGDNVGPL
Sbjct: 66  QLVNLRIQKESSK-VVNMVDIEDLGNKVCYCRCWRSKKFPLCDGSHAKHNEDTGDNVGPL 124

Query: 97  LIK 99
           ++K
Sbjct: 125 VLK 127

Branchiostoma floridae (taxid: 7739)

>sp|C4A0P0|CID2B_BRAFL CDGSH iron-sulfur domain-containing protein 2 homolog B OS=Branchiostoma floridae GN=BRAFLDRAFT_274541 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)

Query: 37  KLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPL 96
           +LVN   +K  S+ VV+   I+D+ +K  YCRCWRSKKFPLCDG+H  HN  TGDNVGPL
Sbjct: 66  QLVNLRIQKESSK-VVNMVDIEDLGNKVCYCRCWRSKKFPLCDGSHAKHNEDTGDNVGPL 124

Query: 97  LIK 99
           ++K
Sbjct: 125 VLK 127

Branchiostoma floridae (taxid: 7739)

>sp|B4MBU8|CISD2_DROVI CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila virilis GN=GJ14516 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 38  LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLL 97
           L N N +K++++ VVD   I+++ DK A+CRCW++K +P CDG+H  HN  TGDNVGP++
Sbjct: 71  LCNENVRKHEAK-VVDMIDIENIADKAAFCRCWKTKNWPYCDGSHAAHNKDTGDNVGPIV 129

Query: 98  IK 99
           IK
Sbjct: 130 IK 131

Drosophila virilis (taxid: 7244)

>sp|B3M1H7|CISD2_DROAN CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila ananassae GN=GF16608 PE=3 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 41/58 (70%)

Query: 42  NQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIK 99
           NQ +     VVD   ++D+ DK A+CRCW+SK +P CDG+H  HN  TGDNVGP+++K
Sbjct: 75  NQIRKHEPKVVDTIDVEDIADKAAFCRCWKSKNWPYCDGSHGEHNKLTGDNVGPVVVK 132

Drosophila ananassae (taxid: 7217)

>sp|Q6PCF8|CID2A_XENLA CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis GN=cisd2-a PE=2 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%)

Query: 38  LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLL 97
           L+N   +K   + V +  I D    K AYCRCWRSK FP+CDG+H  HN  TGDNVGPL+
Sbjct: 70  LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 98  IKDGKV 103
           +K  +V
Sbjct: 130 LKKKEV 135

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus laevis (taxid: 8355)

>sp|Q5I027|CISD2_XENTR CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%)

Query: 38  LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLL 97
           L+N   +K   + V +  I D    K AYCRCWRSK FP+CDG+H  HN  TGDNVGPL+
Sbjct: 70  LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 98  IKDGKV 103
           +K  +V
Sbjct: 130 LKKKEV 135

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
449280232	106	CDGSH iron sulfur domain-containing prot	0.488	0.603	0.584	2e-15
308736954	108	CDGSH iron-sulfur domain-containing prot	0.534	0.648	0.569	2e-15
197129947	108	hypothetical protein [Taeniopygia guttat	0.534	0.648	0.569	2e-15
345323376	158	PREDICTED: CDGSH iron-sulfur domain-cont	0.534	0.443	0.555	1e-14
426253273	153	PREDICTED: CDGSH iron-sulfur domain-cont	0.534	0.457	0.555	2e-14
52345526	103	CDGSH iron sulfur domain 1 [Xenopus (Sil	0.488	0.621	0.6	3e-14
77404223	106	CDGSH iron-sulfur domain-containing prot	0.534	0.660	0.555	3e-14
149690259	106	PREDICTED: CDGSH iron-sulfur domain-cont	0.480	0.594	0.578	4e-14
339522215	106	CDGSH iron-sulfur domain-containing prot	0.534	0.660	0.555	4e-14
440906004	100	CDGSH iron-sulfur domain-containing prot	0.534	0.7	0.555	5e-14

>gi|449280232|gb|EMC87571.1| CDGSH iron sulfur domain-containing protein 1, partial [Columba livia]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 35  CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVG 94
           CK +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H+ HN  TGDNVG
Sbjct: 39  CKAMVNPSVQKDNPKVVHAFDV-EDLGDKAVYCRCWRSKKFPLCDGSHIKHNEETGDNVG 97

Query: 95  PLLIK 99
           PL+IK
Sbjct: 98  PLIIK 102

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|308736954|ref|NP_001184185.1| CDGSH iron-sulfur domain-containing protein 1 [Taeniopygia guttata] gi|197129596|gb|ACH46094.1| hypothetical protein [Taeniopygia guttata] gi|197129597|gb|ACH46095.1| hypothetical protein [Taeniopygia guttata]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F+CK   CK +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 34  FLCKDKGCKAMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 92

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 93  ETGDNVGPLIIK 104

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|197129947|gb|ACH46445.1| hypothetical protein [Taeniopygia guttata]

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F+CK   CK +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 34  FLCKDKGCKAMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 92

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 93  ETGDNVGPLIIK 104

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345323376|ref|XP_001507749.2| PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Ornithorhynchus anatinus]

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)

Query: 29  FICK-THCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F+CK  H K +VN + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN+
Sbjct: 84  FLCKDKHKKSVVNLHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHND 142

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 143 ETGDNVGPLIIK 154

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426253273|ref|XP_004020323.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Ovis aries]

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F  K H  K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 79  FYVKDHRNKSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 137

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 138 ETGDNVGPLIIK 149

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|52345526|ref|NP_001004811.1| CDGSH iron sulfur domain 1 [Xenopus (Silurana) tropicalis] gi|49250505|gb|AAH74579.1| MGC69453 protein [Xenopus (Silurana) tropicalis]

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 35 CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVG 94
          CK  VNP+ +K+  + VV    ++D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVG
Sbjct: 36 CKARVNPDLQKDNPK-VVHAFDMEDLGDKAVYCRCWRSKKFPYCDGAHTKHNEETGDNVG 94

Query: 95 PLLIK 99
          PL+IK
Sbjct: 95 PLIIK 99

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|77404223|ref|NP_001029229.1| CDGSH iron-sulfur domain-containing protein 1 [Bos taurus] gi|110825757|sp|Q3ZBU2.1|CISD1_BOVIN RecName: Full=CDGSH iron-sulfur domain-containing protein 1; AltName: Full=MitoNEET gi|73587067|gb|AAI03106.1| CDGSH iron sulfur domain 1 [Bos taurus] gi|296472891|tpg|DAA15006.1| TPA: CDGSH iron sulfur domain-containing protein 1 [Bos taurus]

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F  K H  K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 32  FYVKDHRNKSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 90

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 91  ETGDNVGPLIIK 102

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149690259|ref|XP_001503411.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Equus caballus] gi|335773246|gb|AEH58328.1| CDGSH iron sulfur domain-containing protein-like protein [Equus caballus]

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 36  KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
           K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN  TGDNVGP
Sbjct: 40  KSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98

Query: 96  LLIK 99
           L+IK
Sbjct: 99  LIIK 102

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|339522215|gb|AEJ84272.1| CDGSH iron-sulfur domain-containing protein 1 [Capra hircus]

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 29  FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
           F  K H  K +VNP  +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 32  FYVKDHRNKSMVNPRIQKDTPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 90

Query: 88  RTGDNVGPLLIK 99
            TGDNVGPL+IK
Sbjct: 91  ETGDNVGPLIIK 102

Source: Capra hircus

Species: Capra hircus

Genus: Capra

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440906004|gb|ELR56319.1| CDGSH iron-sulfur domain-containing protein 1, partial [Bos grunniens mutus]

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 29 FICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
          F  K H  K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct: 26 FYVKDHRNKSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 84

Query: 88 RTGDNVGPLLIK 99
           TGDNVGPL+IK
Sbjct: 85 ETGDNVGPLIIK 96

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
UNIPROTKB|Q3ZBU2	106	CISD1 "CDGSH iron-sulfur domai	0.534	0.660	0.555	7.5e-18
UNIPROTKB|F1NG44	106	CISD1 "Uncharacterized protein	0.534	0.660	0.541	1.6e-17
UNIPROTKB|F1PNJ5	103	CISD1 "Uncharacterized protein	0.534	0.679	0.541	6.7e-17
UNIPROTKB|F1RP45	107	CISD1 "Uncharacterized protein	0.534	0.654	0.541	1.4e-16
UNIPROTKB|Q9NZ45	108	CISD1 "CDGSH iron-sulfur domai	0.534	0.648	0.527	1.8e-16
RGD|1309529	108	Cisd1 "CDGSH iron sulfur domai	0.511	0.620	0.529	1.8e-16
ZFIN|ZDB-GENE-040426-1162	107	cisd1 "CDGSH iron sulfur domai	0.534	0.654	0.541	1.8e-16
MGI|MGI:1261855	108	Cisd1 "CDGSH iron sulfur domai	0.480	0.583	0.562	2.3e-16
ZFIN|ZDB-GENE-050327-15	121	zgc:110843 "zgc:110843" [Danio	0.541	0.586	0.5	2.6e-15
TAIR|locus:2165336	108	NEET "NEET group protein" [Ara	0.458	0.555	0.532	3.3e-15

UNIPROTKB|Q3ZBU2 CISD1 "CDGSH iron-sulfur domain-containing protein 1" [Bos taurus (taxid:9913)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 40/72 (55%), Positives = 51/72 (70%)

Query:    29 FICKTHCKK-LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F  K H  K +VNP+ +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN 
Sbjct:    32 FYVKDHRNKSMVNPHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTKHNE 90

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:    91 ETGDNVGPLIIK 102

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NG44 CISD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 39/72 (54%), Positives = 52/72 (72%)

Query:    29 FICKTHC-KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F+ K  C K +VN + +K+  + V  + + +D+ DK  YCRCWRSKKFPLCDG+H  HN+
Sbjct:    32 FLSKDKCCKAMVNLHIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPLCDGSHTQHND 90

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:    91 ETGDNVGPLIIK 102

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

UNIPROTKB|F1PNJ5 CISD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 39/72 (54%), Positives = 49/72 (68%)

Query:    29 FICKTHCKK-LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F  K H  K +VN + +K+  + V  Y + +D+ DK  YCRCWRSKKFP CDG+H  HN 
Sbjct:    29 FYVKDHRNKSMVNLHIQKDNPKIVHAYDM-EDLGDKTVYCRCWRSKKFPFCDGSHTKHNE 87

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:    88 ETGDNVGPLIIK 99

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|F1RP45 CISD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/72 (54%), Positives = 49/72 (68%)

Query:    29 FICKTHCKK-LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F  K H  K +VNP+ +K+ S  VV     +D+ DK  YC CWRSKKFPLC G+H+ HN 
Sbjct:    33 FYVKDHRNKSMVNPHIQKDNS-TVVHAFDREDLGDKAVYCHCWRSKKFPLCAGSHIKHNE 91

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL++K
Sbjct:    92 ETGDNVGPLIVK 103

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

UNIPROTKB|Q9NZ45 CISD1 "CDGSH iron-sulfur domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 38/72 (52%), Positives = 49/72 (68%)

Query:    29 FICKTHCKK-LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F  K H  K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN 
Sbjct:    34 FYVKDHRNKAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNE 92

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:    93 ETGDNVGPLIIK 104

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS

RGD|1309529 Cisd1 "CDGSH iron sulfur domain 1" [Rattus norvegicus (taxid:10116)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 36/68 (52%), Positives = 48/68 (70%)

Query:    32 KTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGD 91
             ++  K +VN   +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH+ HN  TGD
Sbjct:    38 ESRTKAMVNLQIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHIKHNEETGD 96

Query:    92 NVGPLLIK 99
             NVGPL+IK
Sbjct:    97 NVGPLIIK 104

GO:0005739 "mitochondrion" evidence=ISO

GO:0005741 "mitochondrial outer membrane" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1162 cisd1 "CDGSH iron sulfur domain 1" [Danio rerio (taxid:7955)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 39/72 (54%), Positives = 48/72 (66%)

Query:    29 FICKTHC-KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             F   + C K  VN + +K+  + V  + I +D+ DK  YCRCWRSKKFP CDGAH  HN 
Sbjct:    33 FFHNSKCVKPKVNLDLQKDNPKVVHAFDI-EDLGDKAVYCRCWRSKKFPFCDGAHAKHNQ 91

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:    92 ETGDNVGPLIIK 103

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1261855 Cisd1 "CDGSH iron sulfur domain 1" [Mus musculus (taxid:10090)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query:    36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
             K +VN   +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH+ HN  TGDNVGP
Sbjct:    42 KAMVNLQIQKDNPKVVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHIKHNEETGDNVGP 100

Query:    96 LLIK 99
             L+IK
Sbjct:   101 LIIK 104

GO:0005506 "iron ion binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005741 "mitochondrial outer membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

ZFIN|ZDB-GENE-050327-15 zgc:110843 "zgc:110843" [Danio rerio (taxid:7955)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    28 WFICKTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN 87
             +F  ++  K  VN    K+  + V  + + +D+  K  YCRCWRSKKFP CDGAH  HN 
Sbjct:    47 YFSSQSSPKSRVNLTINKDSPKVVHSFDM-EDIGSKAVYCRCWRSKKFPYCDGAHAKHNE 105

Query:    88 RTGDNVGPLLIK 99
              TGDNVGPL+IK
Sbjct:   106 ETGDNVGPLIIK 117

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165336 NEET "NEET group protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 33/62 (53%), Positives = 45/62 (72%)

Query:    39 VNPNQKKNQSRAVVDYAIIDDM-KDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLL 97
             +NP  +KN+ + VVD  ++ ++ K+   YCRCWRS  FPLCDG+H+ HN   GDNVGPLL
Sbjct:    46 INPEIRKNEDK-VVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLL 104

Query:    98 IK 99
             +K
Sbjct:   105 LK 106

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IPI

GO:0055072 "iron ion homeostasis" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
C4A0P0	CID2B_BRAFL	No assigned EC number	0.5873	0.4732	0.4732	yes	N/A
C3ZWH9	CID2A_BRAFL	No assigned EC number	0.5873	0.4732	0.4732	yes	N/A
B0K020	CISD1_RAT	No assigned EC number	0.5294	0.5114	0.6203	yes	N/A
Q91WS0	CISD1_MOUSE	No assigned EC number	0.5625	0.4809	0.5833	yes	N/A
Q3ZBU2	CISD1_BOVIN	No assigned EC number	0.5555	0.5343	0.6603	yes	N/A
Q9NZ45	CISD1_HUMAN	No assigned EC number	0.5468	0.4809	0.5833	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	131
smart00704	38	smart00704, ZnF_CDGSH, CDGSH-type zinc finger	4e-08
pfam09360	34	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGS	3e-07

>gnl|CDD|197836 smart00704, ZnF_CDGSH, CDGSH-type zinc finger

 Score = 45.8 bits (109), Expect = 4e-08
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 59 DMKDKNAYCRCWRSKKFPLCDGAHLHHN 86
          + + K A CRC RSK FP CDG+H  HN
Sbjct: 9  EKRKKYALCRCGRSKNFPYCDGSHKKHN 36

Function unknown. Length = 38

>gnl|CDD|220203 pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 65 AYCRCWRSKKFPLCDGAH 82
          A CRC RSK  P CDG+H
Sbjct: 16 ALCRCGRSKNQPFCDGSH 33

The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm. Length = 34

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
KOG3461|consensus	132		99.97
smart00704	38	ZnF_CDGSH CDGSH-type zinc finger. Function unknown	99.56
PF09360	38	zf-CDGSH: Iron-binding zinc finger CDGSH type; Int	99.53
KOG4605|consensus	129		99.31
COG3369	78	Zinc finger domain containing protein (CDGSH-type)	99.27
KOG4605|consensus	129		97.67

>KOG3461|consensus

Probab=99.97  E-value=7.4e-32  Score=205.14  Aligned_cols=96  Identities=45%  Similarity=0.799  Sum_probs=83.6

Q ss_pred             cchHHHHHHHh---hccCCccCcc---eeeeecccC-CccccccccccCCeeeeeeeeeecCCCceEEEecCCCCCCCCC
Q psy4889           6 KNLAKEIEEVS---FTSNKPTNLG---TWFICKTHC-KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLC   78 (131)
Q Consensus         6 ~~~a~~l~~v~---f~ss~s~~~g---~~f~~k~~~-~~~vN~~I~Kdgpk~VV~~~diEd~~~k~~~CrCg~Skn~PfC   78 (131)
                      .-+-+|+++|.   |+++.-.-++   ..|+.+..+ +.++|..||||+|| |||.|||||++++++|||||+|++||||
T Consensus        29 ~~~~~~~~~v~~p~v~~~ta~~~y~ay~r~~~k~~~n~a~iN~hIqkd~pK-IVd~~d~eDl~~ka~yCrCWrs~kfP~C  107 (132)
T KOG3461|consen   29 LGTVKDIAAVTPPCVAAGTAATAYLAYKRFYVKDHQNKARINLHIQKDNPK-IVDAFDMEDLGDKAAYCRCWRSKKFPLC  107 (132)
T ss_pred             hccccchhhcCCcceecchhhhhhhhheeeeeeecccCccccceeecCCCc-eeEEEehhhhcccceEEEeeccCCcccc
Confidence            34567888885   8877323333   367777766 89999999999999 9999999999999999999999999999


Q ss_pred             CcccccCcCCCCCCcCceeEEecc
Q psy4889          79 DGAHLHHNNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        79 DGSH~~~~~etGdnvgPlii~~k~  102 (131)
                      ||||.+||++||||+|||+|++++
T Consensus       108 DGsh~KhNk~tgdNvgpliikk~~  131 (132)
T KOG3461|consen  108 DGSHGKHNKETGDNVGPLIIKKKE  131 (132)
T ss_pred             cCcccccccccccccccceeeecc
Confidence            999999999999999999999986

>smart00704 ZnF_CDGSH CDGSH-type zinc finger

Probab=99.56  E-value=2.3e-15  Score=93.42  Aligned_cols=33  Identities=48%  Similarity=0.998  Sum_probs=28.3

Q ss_pred             eeeeecCCCceEEEecCCCCCCCCCCcccccCcC
Q psy4889          54 YAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNN   87 (131)
Q Consensus        54 ~~diEd~~~k~~~CrCg~Skn~PfCDGSH~~~~~   87 (131)
                      .|++|. +..++||+||+|+|+|||||||...++
T Consensus         5 ~~~~e~-~~~~~lC~C~~S~~~PfCDGsH~~~~~   37 (38)
T smart00704        5 EVEVEK-REKYALCRCGRSKNFPYCDGSHKKHNE   37 (38)
T ss_pred             EEEecC-CCEEEEeeCCCCCCCCccCCcccCcCc
Confidence            456665 678999999999999999999998765

Function unknown.

>PF09360 zf-CDGSH: Iron-binding zinc finger CDGSH type; InterPro: IPR018967 This entry represents iron-sulphur domain containing proteins that have a CDGSH sequence motif (although the Ser residue can also be an Ala or Thr), and is found in proteins from a wide range of organisms with the exception of fungi

Probab=99.53  E-value=3.4e-15  Score=92.36  Aligned_cols=37  Identities=38%  Similarity=0.592  Sum_probs=23.1

Q ss_pred             ccCCeeeeeeeeeecCCCceEEEecCCCCCCCCCCcccc
Q psy4889          45 KNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHL   83 (131)
Q Consensus        45 Kdgpk~VV~~~diEd~~~k~~~CrCg~Skn~PfCDGSH~   83 (131)
                      +++|. +|+. +.+....+++|||||+|+|+|||||||+
T Consensus         2 ~~~P~-~v~g-~~~~~~~~~~lC~Cg~S~~~PfCDGsH~   38 (38)
T PF09360_consen    2 DNGPY-KVEG-DTELEKGTYALCRCGKSKNKPFCDGSHK   38 (38)
T ss_dssp             TTSSE-EEEE-CGGCSTSEEEE-SSS--TTTTB--SHHH
T ss_pred             CCcCE-EEEe-eEEecCCEEEEecCCCCCCCCccCCcCC
Confidence            35677 5443 3333358899999999999999999995

The CDGSH-type domain binds a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family []. CDGSH-type domains are found in mitoNEET, an iron-containing integral protein of the outer mitochondrian membrane (OMM). MitoNEET forms a dimeric structure with a NEET fold, and contains two domains: a beta-cap region and a cluster-binding domain that coordinated two acid-labile 2Fe-2S clusters (one bound to each protomer) []. The CDGSH iron-sulphur domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, (IPR019610 from INTERPRO) [, ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM. ; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 3TBO_A 3FNV_B 3TBM_B 3TBN_A 3S2R_A 3S2Q_A 3LPQ_A 2QH7_A 3EW0_A 2R13_A ....

>KOG4605|consensus

Probab=99.31  E-value=2.4e-12  Score=98.32  Aligned_cols=88  Identities=17%  Similarity=0.203  Sum_probs=54.7

Q ss_pred             HHHHHHhhccC-CccCcceeeeecccCCccccccccccCCeeeeee--eeeecC-CCceEEEecCCCCCCCCCCcccccC
Q psy4889          10 KEIEEVSFTSN-KPTNLGTWFICKTHCKKLVNPNQKKNQSRAVVDY--AIIDDM-KDKNAYCRCWRSKKFPLCDGAHLHH   85 (131)
Q Consensus        10 ~~l~~v~f~ss-~s~~~g~~f~~k~~~~~~vN~~I~Kdgpk~VV~~--~diEd~-~~k~~~CrCg~Skn~PfCDGSH~~~   85 (131)
                      .|++..+++++ ++...+.. .+.....-.......+..+. |.+.  +.++.. +++|.||.||+|++||||||||+..
T Consensus         2 ~~~a~acls~aak~q~s~~g-kp~~~~~~~~ta~~lp~~g~-v~~k~p~KVhL~a~KtY~WCsCG~S~sQPfCDGsHk~~   79 (129)
T KOG4605|consen    2 RGRAGACLSPAAKGQRSLNG-KPDISSWLAQTAPRLPARGV-VALKTPIKVHLVAGKTYRWCSCGRSKSQPFCDGSHKFQ   79 (129)
T ss_pred             cccchhhhcccccccccccC-CCCchhhccccccccccCce-ecccCceEEEEecCCEEEEEeccccCCCcccccccccc
Confidence            47777888777 33333221 11111112222334455555 5443  334433 5679999999999999999999864


Q ss_pred             cCCCCCCcCceeEEecc
Q psy4889          86 NNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        86 ~~etGdnvgPlii~~k~  102 (131)
                      .   -.++.|+.|+.++
T Consensus        80 ~---~tklrPvrFkvek   93 (129)
T KOG4605|consen   80 G---RTKLRPVRFKVEK   93 (129)
T ss_pred             c---cccccceEeEecc
Confidence            3   4679999999875

>COG3369 Zinc finger domain containing protein (CDGSH-type) [Function unknown]

Probab=99.27  E-value=2.5e-12  Score=91.37  Aligned_cols=28  Identities=36%  Similarity=0.788  Sum_probs=25.4

Q ss_pred             CCceEEEecCCCCCCCCCCcccccCcCC
Q psy4889          61 KDKNAYCRCWRSKKFPLCDGAHLHHNNR   88 (131)
Q Consensus        61 ~~k~~~CrCg~Skn~PfCDGSH~~~~~e   88 (131)
                      ...+++||||.|.|+|||||||++..|+
T Consensus        28 ~~~~~LCrCG~S~NKPfCDGtH~k~gf~   55 (78)
T COG3369          28 DEQAALCRCGHSENKPFCDGTHKKTGFD   55 (78)
T ss_pred             ceEEEEEeccCcCCCCccCCcccccccc
Confidence            4678999999999999999999998775

>KOG4605|consensus

Probab=97.67  E-value=3.4e-05  Score=59.35  Aligned_cols=25  Identities=28%  Similarity=0.691  Sum_probs=22.7

Q ss_pred             CCceEEEecCCCCCCCCCCcccccC
Q psy4889          61 KDKNAYCRCWRSKKFPLCDGAHLHH   85 (131)
Q Consensus        61 ~~k~~~CrCg~Skn~PfCDGSH~~~   85 (131)
                      .+.|++|.|+++.+-|||||+|+..
T Consensus        94 tg~~wlCnCKqT~~rP~CDGtH~~~  118 (129)
T KOG4605|consen   94 TGMVWLCNCKQTQRRPYCDGTHRSE  118 (129)
T ss_pred             cceEEeecccccCCCCccCCccccc
Confidence            5779999999999999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	131
3ree_A	84	Crystal Structure Of Mitoneet Length = 84		1e-15
3ew0_A	80	The Novel 2fe-2s Outer Mitochondrial Protein Mitone		1e-15
2qd0_A	81	Crystal Structure Of Mitoneet Length = 81		2e-15
2r13_A	79	Crystal Structure Of Human Mitoneet Reveals A Novel		3e-15
2qh7_A	76	Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochon		3e-15
4f2c_A	76	The Crystal Structure Of A Human Mitoneet Double Mu		1e-14
4f28_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		1e-14
3s2q_A	83	The Crystal Structure Of At5g51720 (At-Neet) Length		1e-14
4f1e_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-14
4ezf_A	77	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-14
3lpq_A	79	Human Mitoneet With 2fe-2s Coordinating Ligand His		5e-14
3fnv_A	83	Crystal Structure Of Miner1: The Redox-Active 2fe-2		1e-13
3s2r_A	83	Atchloroneet (H87c Mutant) Length = 83		2e-13

>pdb|3REE|A Chain A, Crystal Structure Of Mitoneet Length = 84

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 36  KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
           K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 11  KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 69
Query: 96  LLIKDGKVTGTPGQVP 111
           L+IK  K   + G VP
Sbjct: 70  LIIK--KKETSSGLVP 83

>pdb|3EW0|A Chain A, The Novel 2fe-2s Outer Mitochondrial Protein Mitoneet Displays Conformational Flexibility In Its N-Terminal Cytoplasmic Tethering Domain Length = 80

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 26 GTWFICKTH-CKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLH 84
          G  F  K H  K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  
Sbjct: 3  GMRFYVKDHRNKAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTK 61
Query: 85 HNNRTGDNVGPLLIK 99
          HN  TGDNVGPL+IK
Sbjct: 62 HNEETGDNVGPLIIK 76

>pdb|2QD0|A Chain A, Crystal Structure Of Mitoneet Length = 81

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 13 KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 71
Query: 96 LLIK 99
          L+IK
Sbjct: 72 LIIK 75

>pdb|2R13|A Chain A, Crystal Structure Of Human Mitoneet Reveals A Novel [2fe- 2s] Cluster Coordination Length = 79

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 13 KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 71
Query: 96 LLIK 99
          L+IK
Sbjct: 72 LIIK 75

>pdb|2QH7|A Chain A, Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochondrial Membrane Protein Stabilized By Pioglitazone Length = 76

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 10 KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 68
Query: 96 LLIK 99
          L+IK
Sbjct: 69 LIIK 72

>pdb|4F2C|A Chain A, The Crystal Structure Of A Human Mitoneet Double Mutant In Which Gly 66 Are Asp 67 Are Both Replaced With Ala Residues Length = 76

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+  K  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 10 KAMINLHIQKDNPKIVHAFDM-EDLAAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 68
Query: 96 LLIK 99
          L+IK
Sbjct: 69 LIIK 72

>pdb|4F28|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Met 62 Replaced By A Gly Length = 76

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  +   +D+ DK  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 10 KAMINLHIQKDNPKIVHAFDG-EDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 68
Query: 96 LLIK 99
          L+IK
Sbjct: 69 LIIK 72

>pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) Length = 83

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 39 VNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLI 98
          +NP  +KN+ + V    + +  K+   YCRCWRS  FPLCDG+H+ HN   GDNVGPLL+
Sbjct: 21 INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLL 80
Query: 99 K 99
          K
Sbjct: 81 K 81

>pdb|4F1E|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Asp 67 Replaced By A Gly Length = 76

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+  K  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 10 KAMINLHIQKDNPKIVHAFDM-EDLGGKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 68
Query: 96 LLIK 99
          L+IK
Sbjct: 69 LIIK 72

>pdb|4EZF|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With An Ala Inserted Between Asp 67 And Lys 68 Length = 77

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + D    K  YCRCWRSKKFP CDGAH  HN  TGDNVGP
Sbjct: 10 KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 69
Query: 96 LLIK 99
          L+IK
Sbjct: 70 LIIK 73

>pdb|3LPQ|A Chain A, Human Mitoneet With 2fe-2s Coordinating Ligand His 87 Replaced With Cys Length = 79

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 36 KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGP 95
          K ++N + +K+  + V  + + +D+ DK  YCRCWRSKKFP CDGA   HN  TGDNVGP
Sbjct: 14 KAMINLHIQKDNPKIVHAFDM-EDLGDKAVYCRCWRSKKFPFCDGACTKHNEETGDNVGP 72
Query: 96 LLIK 99
          L+IK
Sbjct: 73 LIIK 76

>pdb|3FNV|A Chain A, Crystal Structure Of Miner1: The Redox-Active 2fe-2s Protein Causative In Wolfram Syndrome 2 Length = 83

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 38  LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLL 97
           L+N   +K   + V +  I D    K AYCRCWRSK FP CDG+H  HN  TGDNVGPL+
Sbjct: 18  LINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLI 77
Query: 98  IKDGKV 103
           +K  +V
Sbjct: 78  LKKKEV 83

>pdb|3S2R|A Chain A, Atchloroneet (H87c Mutant) Length = 83

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 39 VNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLI 98
          +NP  +KN+ + V    + +  K+   YCRCWRS  FPLCDG+ + HN   GDNVGPLL+
Sbjct: 21 INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLL 80
Query: 99 K 99
          K
Sbjct: 81 K 81

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	131
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	1e-20
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	1e-19
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	3e-18
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	4e-05
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	4e-04

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A Length = 80

 Score = 79.0 bits (194), Expect = 1e-20
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%)

Query: 26 GTWFICKTHCKK-LVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLH 84
          G  F  K H  K ++N + +K+  + +V    ++D+ DK  YCRCWRSKKFP CDGAH  
Sbjct: 3  GMRFYVKDHRNKAMINLHIQKDNPK-IVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTK 61

Query: 85 HNNRTGDNVGPLLIK 99
          HN  TGDNVGPL+IK
Sbjct: 62 HNEETGDNVGPLIIK 76

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens} Length = 83

 Score = 76.3 bits (187), Expect = 1e-19
 Identities = 35/72 (48%), Positives = 43/72 (59%)

Query: 32  KTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGD 91
           K     L+N   +K   + V +  I D    K AYCRCWRSK FP CDG+H  HN  TGD
Sbjct: 12  KQQKDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGD 71

Query: 92  NVGPLLIKDGKV 103
           NVGPL++K  +V
Sbjct: 72  NVGPLILKKKEV 83

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A Length = 83

 Score = 72.5 bits (177), Expect = 3e-18
 Identities = 30/68 (44%), Positives = 41/68 (60%)

Query: 32 KTHCKKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGD 91
          +      +NP  +KN+ + V    + +  K+   YCRCWRS  FPLCDG+ + HN   GD
Sbjct: 14 RAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGD 73

Query: 92 NVGPLLIK 99
          NVGPLL+K
Sbjct: 74 NVGPLLLK 81

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum} Length = 69

 Score = 38.3 bits (89), Expect = 4e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 57 IDDMKDKNAYCRCWRSKKFPLCDGAH 82
          +   + +   CRC  S   P CDG+H
Sbjct: 34 LPVEQGQAWLCRCGHSLNKPFCDGSH 59

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis} Length = 60

 Score = 35.3 bits (81), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 10/27 (37%)

Query: 56 IIDDMKDKNAYCRCWRSKKFPLCDGAH 82
           +         CRC  S   P CDG H
Sbjct: 14 EVKIGGRAIYLCRCGHSGSKPHCDGTH 40

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	99.97
4ezf_A	77	Mitoneet, CDGSH iron-sulfur domain-containing prot	99.97
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	99.95
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	99.94
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	99.58
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	99.51
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.38
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	98.85

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens}

Probab=99.97  E-value=5.6e-32  Score=191.93  Aligned_cols=77  Identities=48%  Similarity=0.868  Sum_probs=64.3

Q ss_pred             ceeeeecccC--CccccccccccCCeeeeeeeeeecCC-CceEEEecCCCCCCCCCCcccccCcCCCCCCcCceeEEecc
Q psy4889          26 GTWFICKTHC--KKLVNPNQKKNQSRAVVDYAIIDDMK-DKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        26 g~~f~~k~~~--~~~vN~~I~Kdgpk~VV~~~diEd~~-~k~~~CrCg~Skn~PfCDGSH~~~~~etGdnvgPlii~~k~  102 (131)
                      +++||++.++  +++||..|++++|+ ||+.+|||+++ ++++|||||+|+++|||||||.++++++|||+|||+|++++
T Consensus         4 y~~~~~~~~~~k~~~vN~~I~k~~pK-vVd~~diedl~~~k~~~CrC~~S~~~PfCDGsH~~~n~etGdnvgPli~~~k~   82 (83)
T 3fnv_A            4 MRPFLPKKKQQKDSLINLKIQKENPK-VVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKKE   82 (83)
T ss_dssp             ------------CCCSCSSSCTTSSS-EEEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECCC
T ss_pred             chhhccccccCcccccCcceecCCCc-EeeeechhhccCCCEEEEeCCCCCCCCccCchhhhcccccCCccCCeEEEecc
Confidence            4689998876  58999999999999 99999999999 89999999999999999999999999999999999999987


Q ss_pred             c
Q psy4889         103 V  103 (131)
Q Consensus       103 ~  103 (131)
                      +
T Consensus        83 ~   83 (83)
T 3fnv_A           83 V   83 (83)
T ss_dssp             -
T ss_pred             C
Confidence            4

>4ezf_A Mitoneet, CDGSH iron-sulfur domain-containing protein 1; 2Fe-2S proteins, membrane, mitochondrion, signal-anchor, transmembrane; 1.19A {Homo sapiens} PDB: 2qd0_A 3ree_A 2r13_A 3ew0_A 2qh7_A 4f1e_A 4f2c_A 4f28_A 3lpq_A

Probab=99.97  E-value=9.9e-32  Score=188.47  Aligned_cols=74  Identities=51%  Similarity=0.994  Sum_probs=69.5

Q ss_pred             eeeecccC-CccccccccccCCeeeeeeeeeecCCC-ceEEEecCCCCCCCCCCcccccCcCCCCCCcCceeEEecc
Q psy4889          28 WFICKTHC-KKLVNPNQKKNQSRAVVDYAIIDDMKD-KNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        28 ~f~~k~~~-~~~vN~~I~Kdgpk~VV~~~diEd~~~-k~~~CrCg~Skn~PfCDGSH~~~~~etGdnvgPlii~~k~  102 (131)
                      +||.+.++ +++||..|++++|+ ||+.+|||++++ +++|||||+|+++|||||||.++|+++|+|+|||+|++++
T Consensus         1 ~~~~k~~~~~~~vN~~i~kd~pK-VVd~~diEdl~~~k~~~CrC~~Sk~~PfCDGsH~~hn~etGdnvgPl~~~~k~   76 (77)
T 4ezf_A            1 RFYVKDHRNKAMINLHIQKDNPK-IVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKE   76 (77)
T ss_dssp             -CCSCCCSCTTCSCSSSCTTSSS-EEEEEESBTTSCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEECBC
T ss_pred             CccccccCcccccccceecCCCc-EeeccchhhcCCccEEEEeCCCCCCCCccCCchhhhccccCCCccCeEEEecc
Confidence            36777776 89999999999999 999999999998 9999999999999999999999999999999999999886

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A

Probab=99.95  E-value=3.8e-29  Score=177.34  Aligned_cols=64  Identities=48%  Similarity=1.045  Sum_probs=61.0

Q ss_pred             ccccccccccCCeeeeeeeeeecCC-CceEEEecCCCCCCCCCCcccccCcCCCCCCcCceeEEec
Q psy4889          37 KLVNPNQKKNQSRAVVDYAIIDDMK-DKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDG  101 (131)
Q Consensus        37 ~~vN~~I~Kdgpk~VV~~~diEd~~-~k~~~CrCg~Skn~PfCDGSH~~~~~etGdnvgPlii~~k  101 (131)
                      ++||..|+|+++| |||.+|||+++ ++++|||||+|+++|||||||.++|+++|||+||++|++.
T Consensus        19 ~~vN~~I~K~~~K-VVD~vdiedl~~~~~~~CrC~~Sk~~P~CDGSH~k~n~etGdNvgPlivkk~   83 (83)
T 3s2r_A           19 GGINPEIRKNEDK-VVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLLKKQ   83 (83)
T ss_dssp             -CCCSSTTTTSSS-CCEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHTCCEEEEEEECC
T ss_pred             CccCchhhcCCCc-eecccchhhccCCceEEEecCCCCCCCccCchhHHHhhhcCCCcCCeEEecC
Confidence            6899999999999 99999999998 6899999999999999999999999999999999999863

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A

Probab=99.94  E-value=1.3e-28  Score=173.29  Aligned_cols=76  Identities=51%  Similarity=0.994  Sum_probs=71.2

Q ss_pred             ceeeeecccC-CccccccccccCCeeeeeeeeeecCCCceEEEecCCCCCCCCCCcccccCcCCCCCCcCceeEEecc
Q psy4889          26 GTWFICKTHC-KKLVNPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        26 g~~f~~k~~~-~~~vN~~I~Kdgpk~VV~~~diEd~~~k~~~CrCg~Skn~PfCDGSH~~~~~etGdnvgPlii~~k~  102 (131)
                      |.+||++..+ +.++|+.|.+++|+ +|+.+++|+++++++|||||+|+|+|||||||.++++++|+|+|||+|++++
T Consensus         3 ~~~~~~~~~~~~~~vni~I~k~gP~-~V~~~~led~~~~~~~C~Cg~S~~~PfCDGsH~~~~~etgdnvgPl~~~~~~   79 (80)
T 3ew0_A            3 GMRFYVKDHRNKAMINLHIQKDNPK-IVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKE   79 (80)
T ss_dssp             CCCCCCCCCCCCCCSCSSSCTTSSS-EEEEECGGGCCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCCCCEEEECCC
T ss_pred             CccccccccCCCCccCeEEeCCCCE-EEEeeccccCCCeEEEeeCCCCCCCcccCCccCCcCcccCCCcCCEEEEecc
Confidence            4689988765 78999999999999 9999999998999999999999999999999999999999999999999885

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}

Probab=99.58  E-value=4.7e-16  Score=106.57  Aligned_cols=51  Identities=24%  Similarity=0.302  Sum_probs=42.1

Q ss_pred             cccccccccCCeeeeeeeeeecCC--------CceEEEecCCCCCCCCCCcccccCcCC
Q psy4889          38 LVNPNQKKNQSRAVVDYAIIDDMK--------DKNAYCRCWRSKKFPLCDGAHLHHNNR   88 (131)
Q Consensus        38 ~vN~~I~Kdgpk~VV~~~diEd~~--------~k~~~CrCg~Skn~PfCDGSH~~~~~e   88 (131)
                      .+.+.|.+|||..|.+.+.|++..        ..++|||||+|+|+|||||||+...|+
T Consensus         7 ~~~I~v~~nGPl~V~G~v~i~~~dG~~~~~~~~~~~lC~Cg~S~n~PfCDGsH~~~~f~   65 (69)
T 3tbm_A            7 DVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFD   65 (69)
T ss_dssp             -CEEEECTTSCEEEESSCEEEESSCCEECCBTTEEEECCSSCCSSTTBCCSHHHHTTCC
T ss_pred             ceEEEEeCCCCEEEECCCeEECCCCCEEeeCCCEEEEeeCCCCCCCCccCCCcCCCCcc
Confidence            456889999999777778777543        458999999999999999999987765

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}

Probab=99.51  E-value=3.3e-15  Score=100.40  Aligned_cols=44  Identities=27%  Similarity=0.406  Sum_probs=34.2

Q ss_pred             cccccccCCeeeeeeeeeecCCCceEEEecCCCCCCCCCCcccccCcCCC
Q psy4889          40 NPNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRT   89 (131)
Q Consensus        40 N~~I~Kdgpk~VV~~~diEd~~~k~~~CrCg~Skn~PfCDGSH~~~~~et   89 (131)
                      .+.+..++|. +|.   ++  +++++|||||+|+|+|||||||+..+++.
T Consensus         4 ~I~v~~ngP~-~v~---~e--~~~~~lC~CG~S~n~PFCDGSHk~~~f~~   47 (60)
T 3tbo_A            4 EIRAIENGPY-EVK---IG--GRAIYLCRCGHSGSKPHCDGTHAKVGFKA   47 (60)
T ss_dssp             EEEECTTSCE-EEE---C-----CEEECCSSCCTTTTBCCSHHHHHTCCC
T ss_pred             EEEEeCCCCE-EEE---EC--CcEEEEEECCCCCCCCccCCcCCCCcccc
Confidence            4678889999 554   44  46789999999999999999999877653

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.38  E-value=3e-13  Score=96.42  Aligned_cols=51  Identities=25%  Similarity=0.540  Sum_probs=38.8

Q ss_pred             ccccccCCeeeeeeeeeecCCCceEEEecCCCCCCCCCCcccccCcCCCCCCcCceeEEecc
Q psy4889          41 PNQKKNQSRAVVDYAIIDDMKDKNAYCRCWRSKKFPLCDGAHLHHNNRTGDNVGPLLIKDGK  102 (131)
Q Consensus        41 ~~I~Kdgpk~VV~~~diEd~~~k~~~CrCg~Skn~PfCDGSH~~~~~etGdnvgPlii~~k~  102 (131)
                      ..|...+|. +   +++++ +..|+||+||+|+|+|||||||+..      ++.|+.++.++
T Consensus        12 ~~~~~~~P~-~---v~le~-g~~~~~C~CG~S~~~PfCDGSH~~~------~f~P~~f~~e~   62 (87)
T 3tbn_A           12 PVIAQKAPY-P---VTVEA-GKTYHWCACGRSKAQPFCDGSHKGT------GLAPVAYTPDK   62 (87)
T ss_dssp             CCCSCSSCE-E---EEECT-TCCEEECSSSCCSSTTBCCSTTTTT------TCCCEEECCSS
T ss_pred             cccccCCCE-E---EEeCC-CCEEEEeeCCCCCCCCCcCCccccC------CccceEEEECC
Confidence            446666666 3   23343 5679999999999999999999863      47899998775

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=98.85  E-value=7.2e-10  Score=79.01  Aligned_cols=24  Identities=42%  Similarity=0.834  Sum_probs=22.1

Q ss_pred             CCceEEEecCCCCCCCCCCccccc
Q psy4889          61 KDKNAYCRCWRSKKFPLCDGAHLH   84 (131)
Q Consensus        61 ~~k~~~CrCg~Skn~PfCDGSH~~   84 (131)
                      .++++||+|++|+|.|||||||++
T Consensus        63 ~~~~~lC~CK~T~n~PfCDGsH~~   86 (87)
T 3tbn_A           63 AGTAYFCGCKASKAPPLCDGTHKT   86 (87)
T ss_dssp             CEEEEECSSSCCSSTTBCCSGGGT
T ss_pred             CcEEEEecCCCCCCCCccCCcCCc
Confidence            567999999999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00