Psyllid ID: psy4949

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFLRSQRKR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccHHHHHHHHHcccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHcccccHHHHHHHHHHHHccccccEcHHHHHHHHHHHHHHHHHcccHHHHccccccHHHHccccccEEHHHHHHHHHcccccccEEHHHHHHHHHHHHccccccEEcccccccEEEEEEEccHccccHHHHHcEEccccccccccccccEEEcccccccHHHHHHHHHHccccccccEEEEccccccc
Coil and Loop (DISEMBL)
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAipaavlespsfsytdTLAQEIfsgngkvtvNDFMdtmmsepgpacliwlpllhrltavestshpiacdacgranfvgfryrcakcgnfqmcqecfwwgrvsgghnlehevkenhpvnkLVTRYANHFAVFRKklkptiyhgflrsqrkr
Flexible Loop (DISEMBL)
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVfrkklkptiyhgflrsqrkr
Low Complexity Region (SEG)
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVlsglllnwllSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFLRSQRKR
Disordered region (IsUnstruct)
**IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFL******
Disordered Region (DISOPRED)
HTIDIWNVIEAFRENGLN*******VSVARFETLLSSLYHNLNKR******VHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT***EIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVT*********************LRS****
Disordered Region (DISEMBL)
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFLRSQRKR
Disordered Region (DISPRO)
*TIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFLRS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRYANHFAVFRKKLKPTIYHGFLRSQRKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
Q9Y048	590	Dystrobrevin-1 OS=Caenorh	yes	N/A	0.894	0.416	0.512	5e-77
O60941	627	Dystrobrevin beta OS=Homo	yes	N/A	0.890	0.390	0.493	1e-76
O70585	659	Dystrobrevin beta OS=Mus	yes	N/A	0.890	0.371	0.493	3e-76
P84060	654	Dystrobrevin beta OS=Ratt	yes	N/A	0.865	0.363	0.5	9e-76
Q9Y4J8	743	Dystrobrevin alpha OS=Hom	no	N/A	0.952	0.352	0.481	1e-72
Q9D2N4	746	Dystrobrevin alpha OS=Mus	no	N/A	0.952	0.351	0.485	1e-72
Q9VDW6	3598	Dystrophin, isoforms A/C/	no	N/A	0.814	0.062	0.325	1e-32
Q7YU29	1051	Dystrophin, isoform E OS=	no	N/A	0.814	0.213	0.325	1e-32
Q9VDW3	1669	Dystrophin, isoform B OS=	no	N/A	0.814	0.134	0.325	1e-32
Q0KI50	1854	Dystrophin, isoform D OS=	no	N/A	0.814	0.120	0.325	1e-32

>sp|Q9Y048|DTN1_CAEEL Dystrobrevin-1 OS=Caenorhabditis elegans GN=dyb-1 PE=1 SV=1

 Score =  287 bits (735), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 128/250 (51%), Positives = 179/250 (71%), Gaps = 4/250 (1%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWN+IEAFRENGLNA+ L + +  +R E LL++++HNLNKRL  SQ V  +V   L
Sbjct: 72  HLVDIWNMIEAFRENGLNALPLHTVIKTSRAELLLTTVFHNLNKRLVASQHVDTDVSISL 131

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LL +LL AY  ++ GR+ VFSIKVALAT+C+GKL+DKLRYIFSQ+ D NG +   KF ++
Sbjct: 132 LLAFLLGAYDKQNTGRLTVFSIKVALATLCAGKLVDKLRYIFSQIADSNGLMDHIKFTDF 191

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           LQ +L++  AV E+P+F +++    + F  + KV++N F+DT +S+P P C++WLPLLHR
Sbjct: 192 LQQILSLTTAVFEAPTFGFSENAVNQCFHKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHR 251

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
           + +V +  HP+ CDAC   +F GFRY+C +C N+Q+CQ CFW GR S  H+ EHE+KE  
Sbjct: 252 MASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEYS 311

Query: 239 --NHPVNKLV 246
               P  +LV
Sbjct: 312 SYKSPTKQLV 321

Plays a role in cholinergic transmission and as a functional partner of dystrophin (dys-1), necessary for muscle maintenance.
Caenorhabditis elegans (taxid: 6239)

>sp|O60941|DTNB_HUMAN Dystrobrevin beta OS=Homo sapiens GN=DTNB PE=1 SV=1

 Score =  286 bits (732), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 123/249 (49%), Positives = 178/249 (71%), Gaps = 4/249 (1%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SS+Y+ LNKRLP + Q+ VE    L
Sbjct: 51  HLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVISSIYYQLNKRLPSTHQISVEQSISL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLN++++AY  E  G++ VFS+K  LATMC GK++DKLRY+FSQ+ D NG ++  KF+++
Sbjct: 111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VL +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQRKIMLNMFLDTMMADPPPQCLVWLPLMHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN- 239
           L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G   G H+ +H++KE+ 
Sbjct: 231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHS 290

Query: 240 ---HPVNKL 245
               P  KL
Sbjct: 291 SWKSPAKKL 299

Homo sapiens (taxid: 9606)

>sp|O70585|DTNB_MOUSE Dystrobrevin beta OS=Mus musculus GN=Dtnb PE=1 SV=3

 Score =  285 bits (728), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 123/249 (49%), Positives = 177/249 (71%), Gaps = 4/249 (1%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SS+Y+ LNKRLP + Q+ VE    L
Sbjct: 51  HLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVISSIYYQLNKRLPSTHQISVEQSISL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLN++++AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  K +++
Sbjct: 111 LLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYIFSQMSDSNGLMMFGKLDQF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++ L +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEALKLPTAVFEGPSFGYTEHAVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN- 239
           L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+ 
Sbjct: 231 LAHVENVFHPVECSYCHCESMMGFRYRCQQCHNYQLCQNCFWRGHASGAHSNQHQMKEHS 290

Query: 240 ---HPVNKL 245
               P  KL
Sbjct: 291 SWKSPAKKL 299

Mus musculus (taxid: 10090)

>sp|P84060|DTNB_RAT Dystrobrevin beta OS=Rattus norvegicus GN=Dtnb PE=2 SV=2

 Score =  283 bits (724), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 173/238 (72%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SS+Y+ LNKRLP + Q++VE    L
Sbjct: 51  HLVDIWNMIEAFRDNGLNTLDHATEISVSRLETVISSIYYQLNKRLPSTHQINVEQSISL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLN++++AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  K +++
Sbjct: 111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYIFSQMSDSNGLMMFGKLDQF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++ L +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEALKLPTAVFEGPSFGYTEHAVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G   G H+ +H++KE
Sbjct: 231 LAHVENVFHPVECSYCHCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQHQMKE 288

Rattus norvegicus (taxid: 10116)

>sp|Q9Y4J8|DTNA_HUMAN Dystrobrevin alpha OS=Homo sapiens GN=DTNA PE=1 SV=2

 Score =  273 bits (697), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/268 (48%), Positives = 186/268 (69%), Gaps = 6/268 (2%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEA REN LN ++  ++++V+R E +LS++++ LNKR+P + Q+HVE    L
Sbjct: 51  HLVDIWNVIEALRENALNNLDPNTELNVSRLEAVLSTIFYQLNKRMPTTHQIHVEQSISL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLN+LL+A+  E  G+I VF++K+ALAT+C GK+MDKLRYIFS + D +G +V  +++++
Sbjct: 111 LLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VL +P AV E PSF YT+  A+  FS   KVT+N F+DT+MS+P P CL+WLPLLHR
Sbjct: 171 LREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
           L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ+CFW G   G H+ +H++KE  
Sbjct: 231 LANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYT 290

Query: 239 --NHPVNKLVTRYANHF--AVFRKKLKP 262
               P  KL    +     A  R+ L P
Sbjct: 291 SWKSPAKKLTNALSKSLSCASSREPLHP 318

May be involved in the formation and stability of synapses as well as being involved in the clustering of nicotinic acetylcholine receptors.

Homo sapiens (taxid: 9606)

>sp|Q9D2N4|DTNA_MOUSE Dystrobrevin alpha OS=Mus musculus GN=Dtna PE=1 SV=2

 Score =  273 bits (697), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 130/268 (48%), Positives = 185/268 (69%), Gaps = 6/268 (2%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEA REN LN ++   +++VAR E +LS++++ LNKR+P + Q+HVE    L
Sbjct: 51  HLVDIWNVIEALRENALNNLDPNIELNVARLEAVLSTIFYQLNKRMPTTHQIHVEQSISL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLN+LL+A+  E  G+I VF++K+ALAT+C GK+MDKLRYIFS + D +G +V  +++++
Sbjct: 111 LLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VL +P AV E PSF YT+  A+  FS   KVT+N F+DT+MS+P P CL+WLPLLHR
Sbjct: 171 LREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
           L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ+CFW G   G H+ +H++KE  
Sbjct: 231 LANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYT 290

Query: 239 --NHPVNKLVTRYANHF--AVFRKKLKP 262
               P  KL    +     A  R+ L P
Sbjct: 291 SWKSPAKKLTNALSKSLSCASSREPLHP 318

Involved in synapse maturation and required for normal muscle function.

Mus musculus (taxid: 10090)

>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1 SV=3

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)

Query: 3    IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
            I +    E+F  +GL A   Q+D  + +    T+L SLY  ++K       + + ++  L
Sbjct: 2918 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 2967

Query: 61   LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
             +NW+L+ Y  +  G+IRV S KV L  +C G L +K RY+F  + D +      +    
Sbjct: 2968 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 3027

Query: 121  LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
            L D + +P  + E  +F  ++             ++QE   GN  +++    F+  +  E
Sbjct: 3028 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 3087

Query: 167  PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
            P    L+WLP+LHRL A E+  H   C+ C     VGFRYRC KC NF MCQ+CF++GR 
Sbjct: 3088 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 3145

Query: 227  SGGHNLEHEVKE 238
            +  H L H + E
Sbjct: 3146 AKNHKLTHPMHE 3157

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. Both det and Dg are required for maintenance of early dpp signaling in the presumptive crossvein. Isoform A is not required to maintain muscle integrity, but plays a role in neuromuscular homeostasis by regulating neurotransmitter release. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)

Query: 3   IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           I +    E+F  +GL A   Q+D  + +    T+L SLY  ++K       + + ++  L
Sbjct: 472 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 521

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
            +NW+L+ Y  +  G+IRV S KV L  +C G L +K RY+F  + D +      +    
Sbjct: 522 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 581

Query: 121 LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
           L D + +P  + E  +F  ++             ++QE   GN  +++    F+  +  E
Sbjct: 582 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 641

Query: 167 PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
           P    L+WLP+LHRL A E+  H   C+ C     VGFRYRC KC NF MCQ+CF++GR 
Sbjct: 642 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 699

Query: 227 SGGHNLEHEVKE 238
           +  H L H + E
Sbjct: 700 AKNHKLTHPMHE 711

Specifically required for survival and integrity of the larval musculature: the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)

Query: 3    IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
            I +    E+F  +GL A   Q+D  + +    T+L SLY  ++K       + + ++  L
Sbjct: 1090 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 1139

Query: 61   LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
             +NW+L+ Y  +  G+IRV S KV L  +C G L +K RY+F  + D +      +    
Sbjct: 1140 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 1199

Query: 121  LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
            L D + +P  + E  +F  ++             ++QE   GN  +++    F+  +  E
Sbjct: 1200 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 1259

Query: 167  PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
            P    L+WLP+LHRL A E+  H   C+ C     VGFRYRC KC NF MCQ+CF++GR 
Sbjct: 1260 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 1317

Query: 227  SGGHNLEHEVKE 238
            +  H L H + E
Sbjct: 1318 AKNHKLTHPMHE 1329

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)

Query: 3    IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
            I +    E+F  +GL A   Q+D  + +    T+L SLY  ++K       + + ++  L
Sbjct: 1275 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 1324

Query: 61   LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
             +NW+L+ Y  +  G+IRV S KV L  +C G L +K RY+F  + D +      +    
Sbjct: 1325 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 1384

Query: 121  LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
            L D + +P  + E  +F  ++             ++QE   GN  +++    F+  +  E
Sbjct: 1385 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 1444

Query: 167  PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
            P    L+WLP+LHRL A E+  H   C+ C     VGFRYRC KC NF MCQ+CF++GR 
Sbjct: 1445 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 1502

Query: 227  SGGHNLEHEVKE 238
            +  H L H + E
Sbjct: 1503 AKNHKLTHPMHE 1514

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
328723101	686	PREDICTED: dystrobrevin beta-like [Acyrt	0.865	0.346	0.719	1e-106
270006871	787	hypothetical protein TcasGA2_TC013262 [T	0.865	0.302	0.677	1e-98
189237637	641	PREDICTED: similar to dystrobrevin [Trib	0.865	0.371	0.677	1e-98
195119634	788	GI19671 [Drosophila mojavensis] gi|19390	0.865	0.302	0.689	8e-98
195402419	792	GJ15037 [Drosophila virilis] gi|19414066	0.865	0.300	0.684	2e-97
195029327	822	GH21967 [Drosophila grimshawi] gi|193903	0.865	0.289	0.680	4e-97
195436312	795	GK22187 [Drosophila willistoni] gi|19416	0.865	0.299	0.680	6e-97
195582759	741	GD10888 [Drosophila simulans] gi|1941932	0.865	0.321	0.672	2e-96
386767808	702	Dystrobrevin-like, isoform I [Drosophila	0.865	0.339	0.672	2e-96
195485329	735	GE12465 [Drosophila yakuba] gi|194177148	0.865	0.323	0.672	2e-96

>gi|328723101|ref|XP_001948408.2| PREDICTED: dystrobrevin beta-like [Acyrthosiphon pisum]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/239 (71%), Positives = 204/239 (85%), Gaps = 1/239 (0%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H IDIWNVIEAFRENGLN +E   +V+V++FETL++SLY NLNKRLP  Q VH ++L+ +
Sbjct: 48  HMIDIWNVIEAFRENGLNTLESHVEVNVSKFETLITSLYLNLNKRLPTQQHVHDDLLTTI 107

Query: 61  LLNWLLSAYSV-ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNE 119
           LLNW++S YS  +++GRIRV SIKVAL TMCSGKLMDKLRYIFSQ+CD NGH+VAWKF E
Sbjct: 108 LLNWIMSVYSANDTMGRIRVLSIKVALVTMCSGKLMDKLRYIFSQICDQNGHMVAWKFRE 167

Query: 120 YLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLH 179
           YLQ+VL +P+AV ESPSF YTD ++ EIFSGNGKVTVNDFMD+MMS+PGPACL+WLPLLH
Sbjct: 168 YLQEVLVLPSAVYESPSFHYTDQISAEIFSGNGKVTVNDFMDSMMSDPGPACLVWLPLLH 227

Query: 180 RLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           RL  VE+ +HPI+CDAC R NF GFRYRC KC NFQMCQECFW GRV+  H +EH+VKE
Sbjct: 228 RLANVENVTHPISCDACRRDNFTGFRYRCQKCHNFQMCQECFWRGRVASSHTIEHDVKE 286

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270006871|gb|EFA03319.1| hypothetical protein TcasGA2_TC013262 [Tribolium castaneum]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 162/239 (67%), Positives = 201/239 (84%), Gaps = 1/239 (0%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRE GL+A+E  S++SVAR ETLL SLYH+LNKR P +QQ HV+V S L
Sbjct: 50  HAVDIWNVIEAFREQGLHALEPSSELSVARLETLLCSLYHSLNKRAPPTQQAHVDVCSSL 109

Query: 61  LLNWLLSAY-SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNE 119
           LLNWLL+AY +V+++G+IRVFSIKVALAT+C+GKLMDKLRYIFSQ+ D NG L+ W+FNE
Sbjct: 110 LLNWLLAAYATVDNVGKIRVFSIKVALATLCAGKLMDKLRYIFSQISDSNGLLIQWRFNE 169

Query: 120 YLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLH 179
           YLQ+VLA+PAAV ESP+F+YTD+LA  IF+ N K+TVNDF+DT+MS+PGP CL+WLPLLH
Sbjct: 170 YLQEVLALPAAVYESPTFNYTDSLANSIFNPNVKITVNDFLDTLMSDPGPPCLVWLPLLH 229

Query: 180 RLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           R+  VE+  HP  CDAC R NF GFRYRC KC ++ +CQ+CFW GRV+  H L+H+VKE
Sbjct: 230 RIANVENVIHPTQCDACQRENFSGFRYRCQKCPHYTLCQDCFWKGRVTAPHTLDHQVKE 288

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237637|ref|XP_966997.2| PREDICTED: similar to dystrobrevin [Tribolium castaneum]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 162/239 (67%), Positives = 201/239 (84%), Gaps = 1/239 (0%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRE GL+A+E  S++SVAR ETLL SLYH+LNKR P +QQ HV+V S L
Sbjct: 50  HAVDIWNVIEAFREQGLHALEPSSELSVARLETLLCSLYHSLNKRAPPTQQAHVDVCSSL 109

Query: 61  LLNWLLSAY-SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNE 119
           LLNWLL+AY +V+++G+IRVFSIKVALAT+C+GKLMDKLRYIFSQ+ D NG L+ W+FNE
Sbjct: 110 LLNWLLAAYATVDNVGKIRVFSIKVALATLCAGKLMDKLRYIFSQISDSNGLLIQWRFNE 169

Query: 120 YLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLH 179
           YLQ+VLA+PAAV ESP+F+YTD+LA  IF+ N K+TVNDF+DT+MS+PGP CL+WLPLLH
Sbjct: 170 YLQEVLALPAAVYESPTFNYTDSLANSIFNPNVKITVNDFLDTLMSDPGPPCLVWLPLLH 229

Query: 180 RLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           R+  VE+  HP  CDAC R NF GFRYRC KC ++ +CQ+CFW GRV+  H L+H+VKE
Sbjct: 230 RIANVENVIHPTQCDACQRENFSGFRYRCQKCPHYTLCQDCFWKGRVTAPHTLDHQVKE 288

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195119634|ref|XP_002004335.1| GI19671 [Drosophila mojavensis] gi|193909403|gb|EDW08270.1| GI19671 [Drosophila mojavensis]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 164/238 (68%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QSDVSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 42  HLVDIWNVIEAFRENGLNTLEPQSDVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AYS ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 102 LLNWLLAAYSSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 161

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y D L +EIF    KVTVNDFM T+MSEPGP+CL+WLPLLHR
Sbjct: 162 LREVLALPAAVYESPTFHYKDGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLLHR 221

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 222 LATVETIVHPTICSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195402419|ref|XP_002059803.1| GJ15037 [Drosophila virilis] gi|194140669|gb|EDW57140.1| GJ15037 [Drosophila virilis]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QSDVSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 43  HLVDIWNVIEAFRENGLNTLEPQSDVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 102

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 103 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 162

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y D L +EIF    KVTVNDFM T+MSEPGP+CL+WLPLLHR
Sbjct: 163 LREVLALPAAVYESPTFHYKDGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLLHR 222

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 223 LATVETIVHPTICSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 280

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195029327|ref|XP_001987525.1| GH21967 [Drosophila grimshawi] gi|193903525|gb|EDW02392.1| GH21967 [Drosophila grimshawi]

 Score =  360 bits (924), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 162/238 (68%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QSDVSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 42  HLVDIWNVIEAFRENGLNTLEPQSDVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 102 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 161

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y + L +EIF    KVTVNDFM T+MSEPGP+CL+WLPLLHR
Sbjct: 162 LREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLLHR 221

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 222 LATVETIVHPTICSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195436312|ref|XP_002066112.1| GK22187 [Drosophila willistoni] gi|194162197|gb|EDW77098.1| GK22187 [Drosophila willistoni]

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 162/238 (68%), Positives = 193/238 (81%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QS+VSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 42  HLVDIWNVIEAFRENGLNTLEQQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK +E+
Sbjct: 102 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLSEF 161

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y D L +EIF    KVTVNDFM T+MSEPGP+CL+WLPLLHR
Sbjct: 162 LREVLALPAAVYESPTFHYKDGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLLHR 221

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 222 LATVETIVHPTICSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195582759|ref|XP_002081193.1| GD10888 [Drosophila simulans] gi|194193202|gb|EDX06778.1| GD10888 [Drosophila simulans]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QS+VSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 51  HLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 110

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 111 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 170

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y + L +EIF    KVTVNDFM T+MSEPGP+CL+WLPL+HR
Sbjct: 171 LREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHR 230

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 231 LATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 288

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386767808|ref|NP_001027407.2| Dystrobrevin-like, isoform I [Drosophila melanogaster] gi|383302429|gb|AAZ52816.2| Dystrobrevin-like, isoform I [Drosophila melanogaster]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QS+VSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 42  HLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 102 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 161

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y + L +EIF    KVTVNDFM T+MSEPGP+CL+WLPL+HR
Sbjct: 162 LREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHR 221

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 222 LATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195485329|ref|XP_002091047.1| GE12465 [Drosophila yakuba] gi|194177148|gb|EDW90759.1| GE12465 [Drosophila yakuba]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 192/238 (80%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
           H +DIWNVIEAFRENGLN +E QS+VSVAR ETL+SSLYHNLNKRLP +QQV V+  +GL
Sbjct: 42  HLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
           LLNWLL+AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct: 102 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 161

Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
           L++VLA+PAAV ESP+F Y + L +EIF    KVTVNDFM T+MSEPGP+CL+WLPL+HR
Sbjct: 162 LREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHR 221

Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct: 222 LATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
FB|FBgn0033739	816	Dyb "Dystrobrevin-like" [Droso	0.865	0.291	0.638	1.7e-82
UNIPROTKB|E2RS84	825	DTNB "Uncharacterized protein"	0.869	0.289	0.493	2.1e-68
UNIPROTKB|J9PBA2	608	DTNB "Uncharacterized protein"	0.869	0.393	0.493	2.1e-68
WB|WBGene00001115	590	dyb-1 [Caenorhabditis elegans	0.865	0.403	0.504	2.1e-68
UNIPROTKB|Q9Y048	590	dyb-1 "Dystrobrevin-1" [Caenor	0.865	0.403	0.504	2.1e-68
UNIPROTKB|F1NI42	301	DTNB "Uncharacterized protein"	0.869	0.794	0.489	2.7e-68
UNIPROTKB|F1NRY5	520	DTNB "Uncharacterized protein"	0.869	0.459	0.489	2.7e-68
UNIPROTKB|F1NRY6	509	DTNB "Uncharacterized protein"	0.869	0.469	0.489	2.7e-68
UNIPROTKB|F1NRY7	554	DTNB "Uncharacterized protein"	0.869	0.431	0.489	2.7e-68
UNIPROTKB|E1BJB8	627	DTNB "Uncharacterized protein"	0.869	0.381	0.489	3.5e-68

FB|FBgn0033739 Dyb "Dystrobrevin-like" [Drosophila melanogaster (taxid:7227)]

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 152/238 (63%), Positives = 183/238 (76%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWNVIEAFRENGLN +E QS+VSVAR ETL+SSLYHNLNKRLP +QQV V+     
Sbjct:    42 HLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGL 101

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY+ ++ G+IRVFSIKVALATMCSGKL+DKLRYIFSQ+ D  G LVAWK  E+
Sbjct:   102 LLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISDGAGQLVAWKLGEF 161

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VLA+PAAV ESP+F Y + L +EIF    KVTVNDFM T+MSEPGP+CL+WLPL+HR
Sbjct:   162 LREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHR 221

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
             L  VE+  HP  C  C + NF GFRYRC +C  +Q+CQECFW G+ S  H  +HEVKE
Sbjct:   222 LATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKE 279

GO:0008307 "structural constituent of muscle" evidence=ISS

GO:0016010 "dystrophin-associated glycoprotein complex" evidence=ISS

GO:0016014 "dystrobrevin complex" evidence=ISS;NAS

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|E2RS84 DTNB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 118/239 (49%), Positives = 169/239 (70%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SSLY+ LNKRLP + Q+ VE     
Sbjct:   274 HLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVISSLYYQLNKRLPSTHQISVEQSISL 333

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRY+FSQ+ D NG ++  KF+++
Sbjct:   334 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQF 393

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct:   394 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 453

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   454 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 512

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|J9PBA2 DTNB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 118/239 (49%), Positives = 169/239 (70%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SSLY+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVISSLYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRY+FSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00001115 dyb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 120/238 (50%), Positives = 169/238 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFRENGLNA+ L + +  +R E LL++++HNLNKRL  SQ V  +V    
Sbjct:    72 HLVDIWNMIEAFRENGLNALPLHTVIKTSRAELLLTTVFHNLNKRLVASQHVDTDVSISL 131

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                    AY  ++ GR+ VFSIKVALAT+C+GKL+DKLRYIFSQ+ D NG +   KF ++
Sbjct:   132 LLAFLLGAYDKQNTGRLTVFSIKVALATLCAGKLVDKLRYIFSQIADSNGLMDHIKFTDF 191

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             LQ +L++  AV E+P+F +++    + F  + KV++N F+DT +S+P P C++WLPLLHR
Sbjct:   192 LQQILSLTTAVFEAPTFGFSENAVNQCFHKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHR 251

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
             + +V +  HP+ CDAC   +F GFRY+C +C N+Q+CQ CFW GR S  H+ EHE+KE
Sbjct:   252 MASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKE 309

GO:0008270 "zinc ion binding" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

GO:0007626 "locomotory behavior" evidence=IMP

GO:0032224 "positive regulation of synaptic transmission, cholinergic" evidence=IMP

GO:0045214 "sarcomere organization" evidence=IGI

GO:0016014 "dystrobrevin complex" evidence=IPI

GO:0008092 "cytoskeletal protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q9Y048 dyb-1 "Dystrobrevin-1" [Caenorhabditis elegans (taxid:6239)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 120/238 (50%), Positives = 169/238 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFRENGLNA+ L + +  +R E LL++++HNLNKRL  SQ V  +V    
Sbjct:    72 HLVDIWNMIEAFRENGLNALPLHTVIKTSRAELLLTTVFHNLNKRLVASQHVDTDVSISL 131

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                    AY  ++ GR+ VFSIKVALAT+C+GKL+DKLRYIFSQ+ D NG +   KF ++
Sbjct:   132 LLAFLLGAYDKQNTGRLTVFSIKVALATLCAGKLVDKLRYIFSQIADSNGLMDHIKFTDF 191

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             LQ +L++  AV E+P+F +++    + F  + KV++N F+DT +S+P P C++WLPLLHR
Sbjct:   192 LQQILSLTTAVFEAPTFGFSENAVNQCFHKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHR 251

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
             + +V +  HP+ CDAC   +F GFRY+C +C N+Q+CQ CFW GR S  H+ EHE+KE
Sbjct:   252 MASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKE 309

GO:0005515 "protein binding" evidence=IPI

GO:0016010 "dystrophin-associated glycoprotein complex" evidence=IDA

GO:0046716 "muscle cell homeostasis" evidence=IMP

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=TAS

GO:0040017 "positive regulation of locomotion" evidence=IMP

GO:0005277 "acetylcholine transmembrane transporter activity" evidence=IMP

GO:0015870 "acetylcholine transport" evidence=IMP

GO:0007271 "synaptic transmission, cholinergic" evidence=IMP

UNIPROTKB|F1NI42 DTNB "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 117/239 (48%), Positives = 170/239 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  ++++V+R ET++SS+Y+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHNTEINVSRLETIISSIYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGHGKLTVFSVKAMLATMCGGKILDKLRYIFSQISDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+T+N F+DT+M++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKITLNMFLDTLMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NRY5 DTNB "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 117/239 (48%), Positives = 170/239 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  ++++V+R ET++SS+Y+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHNTEINVSRLETIISSIYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGHGKLTVFSVKAMLATMCGGKILDKLRYIFSQISDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+T+N F+DT+M++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKITLNMFLDTLMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NRY6 DTNB "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 117/239 (48%), Positives = 170/239 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  ++++V+R ET++SS+Y+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHNTEINVSRLETIISSIYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGHGKLTVFSVKAMLATMCGGKILDKLRYIFSQISDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+T+N F+DT+M++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKITLNMFLDTLMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NRY7 DTNB "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 117/239 (48%), Positives = 170/239 (71%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  ++++V+R ET++SS+Y+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHNTEINVSRLETIISSIYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRYIFSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGHGKLTVFSVKAMLATMCGGKILDKLRYIFSQISDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+T+N F+DT+M++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKITLNMFLDTLMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0045202 "synapse" evidence=IEA

UNIPROTKB|E1BJB8 DTNB "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 117/239 (48%), Positives = 169/239 (70%)

Query:     1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVXXXX 60
             H +DIWN+IEAFR+NGLN ++  +++SV+R ET++SS+Y+ LNKRLP + Q+ VE     
Sbjct:    51 HLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVISSIYYQLNKRLPSTHQISVEQSISL 110

Query:    61 XXXXXXSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
                   +AY  E  G++ VFS+K  LATMC GK++DKLRY+FSQ+ D NG ++  KF+++
Sbjct:   111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQF 170

Query:   121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
             L++VL +P AV E PSF YT+   +  F    K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct:   171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230

Query:   181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
             L  VE+  HP+ C  C   + +GFRYRC +C N+Q+CQ CFW G  SG H+ +H++KE+
Sbjct:   231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH 289

GO:0045202 "synapse" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Y048	DTN1_CAEEL	No assigned EC number	0.512	0.8945	0.4169	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	275
pfam09068	125	pfam09068, efhand_1, EF hand	1e-31
pfam09069	89	pfam09069, efhand_2, EF-hand	1e-30
cd02334	49	cd02334, ZZ_dystrophin, Zinc finger, ZZ type	2e-19
smart00291	44	smart00291, ZnF_ZZ, Zinc-binding domain, present i	2e-10
pfam00569	46	pfam00569, ZZ, Zinc finger, ZZ type	2e-09
cd02338	49	cd02338, ZZ_PCMF_like, Zinc finger, ZZ type	3e-09
cd02249	46	cd02249, ZZ, Zinc finger, ZZ type	2e-07
cd02339	45	cd02339, ZZ_Mind_bomb, Zinc finger, ZZ type	1e-06
cd02345	49	cd02345, ZZ_dah, Zinc finger, ZZ type	4e-06
cd02343	48	cd02343, ZZ_EF, Zinc finger, ZZ type	3e-05
cd02341	48	cd02341, ZZ_ZZZ3, Zinc finger, ZZ type	3e-04
cd02335	49	cd02335, ZZ_ADA2, Zinc finger, ZZ type	4e-04
cd02340	43	cd02340, ZZ_NBR1_like, Zinc finger, ZZ type	7e-04
cd02344	45	cd02344, ZZ_HERC2, Zinc finger, ZZ type	0.004

>gnl|CDD|149945 pfam09068, efhand_1, EF hand

 Score =  113 bits (285), Expect = 1e-31
 Identities = 42/90 (46%), Positives = 57/90 (63%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
             +D+WNVIE FR +GLN ++  + +SVA+  TLL++LY  L KRLP    V  E+   L
Sbjct: 36  DLVDLWNVIEIFRRHGLNQLDSTASLSVAQLITLLTTLYDFLEKRLPTLVNVPAELAVDL 95

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMC 90
           LLNWLL+ Y     G+IRV S K+ L  +C
Sbjct: 96  LLNWLLNVYDPGRTGKIRVLSFKIGLILLC 125

Members of this family adopt a helix-loop-helix motif, as per other EF hand domains. However, since they do not contain the canonical pattern of calcium binding residues found in many EF hand domains, they do not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (pfam00397), enhancing dystroglycan binding. Length = 125

>gnl|CDD|149946 pfam09069, efhand_2, EF-hand

 Score =  109 bits (275), Expect = 1e-30
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 94  LMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGK 153
           L DK RY+FSQ+ D NG +   K    L + L +P  V E  SF   +   +  F   GK
Sbjct: 1   LEDKYRYLFSQISDSNGLMDQRKLGLLLHEALQLPRQVGEGASFGGIEPSVRSCFPQVGK 60

Query: 154 --VTVNDFMDTMMSEPGPACLIWLPLLHRLT 182
             + +N F+D +M E  P  L+WLP+LHRL 
Sbjct: 61  PKIELNHFLDWLMLE--PQSLVWLPVLHRLA 89

Members of this family adopt a helix-loop-helix motif, as per other EF hand domains. However, since they do not contain the canonical pattern of calcium binding residues found in many EF hand domains, they do not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (pfam00397), enhancing dystroglycan binding. Length = 89

>gnl|CDD|239074 cd02334, ZZ_dystrophin, Zinc finger, ZZ type

 Score = 78.9 bits (195), Expect = 2e-19
 Identities = 22/46 (47%), Positives = 27/46 (58%)

Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           C+ C      GFRYRC KC N+ +CQ CF+ GR S  H   H +KE
Sbjct: 3   CNICKEFPITGFRYRCLKCFNYDLCQSCFFSGRTSKSHKNSHPMKE 48

Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane glycoprotein complex in muscle cells. The ZZ domain in dystrophin has been shown to be essential for binding to the membrane protein beta-dystroglycan. Length = 49

>gnl|CDD|197633 smart00291, ZnF_ZZ, Zinc-binding domain, present in Dystrophin, CREB-binding protein

 Score = 54.4 bits (131), Expect = 2e-10
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 188 SHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHN 231
            H  +CD CG    VG RY C  C ++ +CQ CF  G   G H+
Sbjct: 2   HHSYSCDTCG-KPIVGVRYHCLVCPDYDLCQSCFAKGSAGGEHS 44

Putative zinc-binding domain present in dystrophin-like proteins, and CREB-binding protein/p300 homologues. The ZZ in dystrophin appears to bind calmodulin. A missense mutation of one of the conserved cysteines in dystrophin results in a patient with Duchenne muscular dystrophy. Length = 44

>gnl|CDD|144236 pfam00569, ZZ, Zinc finger, ZZ type

 Score = 51.7 bits (124), Expect = 2e-09
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 187 TSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGH 230
             H   C+ C     +GFRY C +C ++ +CQ CF+ GR +GGH
Sbjct: 1   IHHVYTCNICKECPIIGFRYHCLRCFDYDLCQSCFFTGRKAGGH 44

Zinc finger present in dystrophin, CBP/p300. ZZ in dystrophin binds calmodulin. Putative zinc finger; binding not yet shown. Four to six cysteine residues in its sequence are responsible for coordinating zinc ions, to reinforce the structure. Length = 46

>gnl|CDD|239078 cd02338, ZZ_PCMF_like, Zinc finger, ZZ type

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
           ++CD CG++NF G RY+C  C ++ +C +C+  G  +  H  +H
Sbjct: 1   VSCDGCGKSNFTGRRYKCLICYDYDLCADCYDSGVTTERHLFDH 44

Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel modulatory factor 1 or FIGC has been shown to possess intrinsic E3 ubiquitin ligase activity and to promote ubiquitination. Length = 49

>gnl|CDD|239069 cd02249, ZZ, Zinc finger, ZZ type

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
            +CD C     VG RY C  C +F +C  C+   +   GH  +H   E
Sbjct: 1   YSCDGCL-KPIVGVRYHCLVCEDFDLCSSCY--AKGKKGHPPDHSFTE 45

Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have other zinc-binding motifs as well, and the majority serve as scaffolds in pathways involving acetyltransferase, protein kinase, or ubiqitin-related activity. ZZ proteins can be grouped into the following functional classes: chromatin modifying, cytoskeletal scaffolding, ubiquitin binding or conjugating, and membrane receptor or ion-channel modifying proteins. Length = 46

>gnl|CDD|239079 cd02339, ZZ_Mind_bomb, Zinc finger, ZZ type

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHE 235
           I CD C +   +G R++CA+C N+ +C  C+        H+LEH 
Sbjct: 1   IICDTCRKQGIIGIRWKCAECPNYDLCTTCY----HGDKHDLEHR 41

Zinc finger present in Drosophila Mind bomb (D-mib) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Mind bomb is an E3 ubiqitin ligase that has been shown to regulate signaling by the Notch ligand Delta in Drosophila melanogaster. Length = 45

>gnl|CDD|239085 cd02345, ZZ_dah, Zinc finger, ZZ type

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
           ++C AC + +  G R+ C  C ++ +C  C+  GR +  HN  H
Sbjct: 1   LSCSACRKQDISGIRFPCQVCRDYSLCLGCYTKGRETKRHNSLH 44

Zinc finger present in Drosophila dah and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dah (discontinuous actin hexagon) is a membrane associated protein essential for cortical furrow formation in Drosophila. . Length = 49

>gnl|CDD|239083 cd02343, ZZ_EF, Zinc finger, ZZ type

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEV 236
           I+CD C        RYRC +C +  +C+ CF  G    GH  +HE+
Sbjct: 1   ISCDGCDEIA-PWHRYRCLQCTDMDLCKTCFLGGVKPEGHEDDHEM 45

Zinc finger present in proteins with an EF_hand motif. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Length = 48

>gnl|CDD|239081 cd02341, ZZ_ZZZ3, Zinc finger, ZZ type

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 191 IACDACGRANFVGFRYRCAKC--GNFQMCQECF 221
             CD+CG     G RY C++C  G+F +CQ+C 
Sbjct: 1   FKCDSCGIEPIPGTRYHCSECDDGDFDLCQDCV 33

Zinc finger present in ZZZ3 (ZZ finger containing 3) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Length = 48

>gnl|CDD|239075 cd02335, ZZ_ADA2, Zinc finger, ZZ type

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
           CD C +      R +CA+C +F +C ECF  G   G H  +H
Sbjct: 3   CDYCSKDITGTIRIKCAECPDFDLCLECFSAGAEIGKHRNDH 44

Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Length = 49

>gnl|CDD|239080 cd02340, ZZ_NBR1_like, Zinc finger, ZZ type

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQEC 220
           + CD C     VG RY+C  C ++ +C+ C
Sbjct: 1   VICDGCQGPI-VGVRYKCLVCPDYDLCESC 29

Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears to control the multiplication of sigma rhabdovirus. NBR1 (Next to BRCA1 gene 1 protein) interacts with fasciculation and elongation protein zeta-1 (FEZ1) and calcium and integrin binding protein (CIB), and may function in cell signalling pathways. Sequestosome 1 is a phosphotyrosine independent ligand for the Lck SH2 domain and binds noncovalently to ubiquitin via its UBA domain. Length = 43

>gnl|CDD|239084 cd02344, ZZ_HERC2, Zinc finger, ZZ type

 Score = 34.1 bits (78), Expect = 0.004
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
           + CD C      G R++C  C +F  C+ CF     +  HN  H
Sbjct: 1   VTCDGCQMFPINGPRFKCRNCDDFDFCENCFK----TRKHNTRH 40

Zinc finger present in HERC2 and related proteins. HERC2 is a potential E3 ubiquitin protein ligase and/or guanine nucleotide exchange factor. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Length = 45

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
KOG4301|consensus	434		100.0
KOG4286|consensus	966		100.0
PF09069	90	EF-hand_3: EF-hand; InterPro: IPR015154 Like other	99.96
KOG0044|consensus	193		99.94
PF09068	127	EF-hand_2: EF hand; InterPro: IPR015153 Like other	99.89
cd02334	49	ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr	99.82
cd02345	49	ZZ_dah Zinc finger, ZZ type. Zinc finger present i	99.69
cd02343	48	ZZ_EF Zinc finger, ZZ type. Zinc finger present in	99.68
cd02338	49	ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre	99.67
cd02339	45	ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre	99.63
cd02344	45	ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present	99.61
cd02341	48	ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present	99.58
cd02340	43	ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre	99.55
cd02335	49	ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present	99.54
PF00569	46	ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc	99.49
cd02249	46	ZZ Zinc finger, ZZ type. Zinc finger present in dy	99.44
cd02342	43	ZZ_UBA_plant Zinc finger, ZZ type. Zinc finger pre	99.43
smart00291	44	ZnF_ZZ Zinc-binding domain, present in Dystrophin,	99.39
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.35
KOG1280|consensus	381		99.3
KOG0034|consensus	187		99.28
KOG4582|consensus	278		99.18
cd02337	41	ZZ_CBP Zinc finger, ZZ type. Zinc finger present i	98.79
PTZ00184	149	calmodulin; Provisional	98.75
PTZ00183	158	centrin; Provisional	98.74
KOG0027|consensus	151		98.68
cd02336	45	ZZ_RSC8 Zinc finger, ZZ type. Zinc finger present	98.51
KOG0457|consensus	438		98.43
PTZ00183	158	centrin; Provisional	98.19
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.18
PLN02964	644	phosphatidylserine decarboxylase	98.08
PTZ00184	149	calmodulin; Provisional	98.07
KOG0027|consensus	151		98.04
KOG4666|consensus	412		98.04
COG5114	432	Histone acetyltransferase complex SAGA/ADA, subuni	97.94
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	97.92
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	97.86
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	97.79
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	97.75
KOG0038|consensus	189		97.74
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	97.71
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	97.64
KOG0037|consensus	221		97.63
KOG0028|consensus	172		97.57
KOG0034|consensus	187		97.57
cd00052	67	EH Eps15 homology domain; found in proteins implic	97.55
KOG0037|consensus	221		97.5
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	97.44
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	97.41
cd00213	88	S-100 S-100: S-100 domain, which represents the la	97.34
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	97.32
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	97.25
KOG4347|consensus	671		97.24
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	97.2
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	97.16
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	97.1
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	97.08
cd00213	88	S-100 S-100: S-100 domain, which represents the la	96.8
KOG0036|consensus	463		96.79
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	96.78
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	96.78
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	96.77
PLN02964	644	phosphatidylserine decarboxylase	96.77
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	96.68
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	96.67
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	96.62
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	96.58
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	96.56
cd00052	67	EH Eps15 homology domain; found in proteins implic	96.52
PF14658	66	EF-hand_9: EF-hand domain	96.52
KOG0044|consensus	193		96.52
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	96.43
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	96.41
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	96.35
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	96.12
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	96.05
KOG0036|consensus	463		96.03
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	95.91
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	95.9
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	95.88
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	95.85
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	95.83
KOG2562|consensus	493		95.56
PF07649	30	C1_3: C1-like domain; InterPro: IPR011424 This sho	95.38
KOG2643|consensus	489		95.28
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	95.21
KOG0031|consensus	171		95.11
KOG0028|consensus	172		94.87
KOG4223|consensus	325		94.79
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	94.74
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	94.62
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	94.49
KOG0377|consensus	631		94.24
KOG0041|consensus	244		94.12
KOG0751|consensus	694		93.95
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	93.72
KOG0030|consensus	152		92.99
KOG0031|consensus	171		92.62
PF03107	30	C1_2: C1 domain; InterPro: IPR004146 This short do	92.58
KOG0038|consensus	189		92.08
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	91.98
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	91.2
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	91.05
KOG2643|consensus	489		90.96
KOG0030|consensus	152		90.26
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	89.37
KOG2562|consensus	493		87.36
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	84.43
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	83.32
KOG4223|consensus	325		81.58
KOG0377|consensus	631		81.1

>KOG4301|consensus

Probab=100.00  E-value=1.3e-68  Score=487.17  Aligned_cols=254  Identities=46%  Similarity=0.916  Sum_probs=249.9

Q ss_pred             CcchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehH
Q psy4949           1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVF   80 (275)
Q Consensus         1 hlvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~   80 (275)
                      ||||||||||||||||||.++++++|++++|+++++.+|+++||++|++++||++..+.+++++++.+||+.+.|++.++
T Consensus        51 hlvdiwnmieafren~ln~l~~~tei~~srlea~lstif~qlnkrL~ss~~id~e~sislllaflLaA~ds~~~g~~~vf  130 (434)
T KOG4301|consen   51 HLVDIWNMIEAFRENGLNNLDPNTEINVSRLEAVLSTIFYQLNKRLPSSHQIDVEQSISLLLAFLLAAEDSEGQGKQQVF  130 (434)
T ss_pred             hhHHHHHHHHHHHhccccCCCCcchhhhhHHHHHHHHHHHhhhccCcccccccHHHHHHHHHHHHHhhcCccCCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcCCCcccHHHHH
Q psy4949          81 SIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFM  160 (275)
Q Consensus        81 ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~d~~Is~~eFl  160 (275)
                      +.+++|+++|+|++.||+||+|++.+|++|-+...++..+|++++++|.++.|.++||++|.+++.||.++.+++++.|+
T Consensus       131 avkialatlc~gk~~dklryIfs~isds~gim~~i~~~~fl~evlslpT~v~e~psfg~te~~a~~cf~qqrKv~Ln~fl  210 (434)
T KOG4301|consen  131 AVKIALATLCGGKIKDKLRYIFSLISDSRGIMQEIQRDQFLHEVLSLPTAVFEGPSFGYTELSARLCFLQQRKVELNQFL  210 (434)
T ss_pred             cchhhhhhhccchHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHcCCchhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccchhhhhhcccccCCCCcCcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeec
Q psy4949         161 DTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENH  240 (275)
Q Consensus       161 ~~~~~d~~Pq~lvWL~~~~r~~~~~~~~h~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~  240 (275)
                      +.+++||+|+|++|||++||++.++++.|++.|+.|...+|.|+||+|..|.||.+|+.|||+|..++.|++.|.|+||+
T Consensus       211 dtl~sdp~p~cl~wlpLmhrla~v~nv~hpv~cs~c~srs~~gfry~cq~C~nyqlcq~cfwrG~~g~~hsnqh~mke~S  290 (434)
T KOG4301|consen  211 DTLMSDPPPQCLVWLPLMHRLATVENVFHPVECSYCRSRSMMGFRYRCQQCHNYQLCQQCFWRGHAGGSHSNQHQMKEYS  290 (434)
T ss_pred             HHHhcCCCchhHHHHHHHHHHHhhcccCCCccCcceecccccchhhhHhhcCCccccchhhccccCCCCcchHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhhHH
Q psy4949         241 PVNKLVTRYANHFA  254 (275)
Q Consensus       241 ~~~~~~~~~~~~~~  254 (275)
                      +|++|.+.+...-.
T Consensus       291 s~ksp~k~Lv~ais  304 (434)
T KOG4301|consen  291 SWKSPAKKLVHAIS  304 (434)
T ss_pred             cccChHHHHHHHhh
Confidence            99999999865443

>KOG4286|consensus

Probab=100.00  E-value=2.7e-60  Score=464.96  Aligned_cols=265  Identities=27%  Similarity=0.542  Sum_probs=248.4

Q ss_pred             cchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHH
Q psy4949           2 TIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFS   81 (275)
Q Consensus         2 lvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~e   81 (275)
                      ||++..+.+||.+|.|++.  +..|++.++.++|..+|+++..+.|.  +++++.++++++||++|+||+.|+|+|+++|
T Consensus       416 lv~ltl~l~if~~h~l~~~--~e~m~~~~~i~~L~~~y~~l~e~~g~--~v~v~l~vD~~lN~llNvyD~~R~g~irvls  491 (966)
T KOG4286|consen  416 LLSLSLALDALDQHNLKQN--DQPMDILQIINCLTTIYDRLEQEHGN--LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLS  491 (966)
T ss_pred             cccHHHHHHHHHHhccccc--CcCCCHHHHHHHHHHHHHHHHHHccc--ccccchHHHHHHHHHHHhcccCCCcceEEee
Confidence            7899999999999999986  67899999999999999999999875  8889999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc--hHHHhhhhcCC---CcccH
Q psy4949          82 IKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT--DTLAQEIFSGN---GKVTV  156 (275)
Q Consensus        82 f~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~--e~~v~~cF~~d---~~Is~  156 (275)
                      ||+|+++||++.++|||+|+|++.+|+.-.+++..++.+|.++++||+.+||.++||++  |++|++||+..   +.|+.
T Consensus       492 ~ki~~i~lck~~leek~~ylF~~vA~~~sq~~q~~l~lLL~dliqipr~lGE~aAfGgsNvepsvrsCF~~v~~~pei~~  571 (966)
T KOG4286|consen  492 FKIGIISLCKAHLEDKYRYLFKQVASSTSQCDQRRLGLLLHDLIQIPRQLGEVAAFGGSNIEPSVRSCFQFVNNKPEIEA  571 (966)
T ss_pred             ehhhHHHHhcchhHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHHHHhHHHhhcCCCCChHHHHHHHhcCCCCcchH
Confidence            99999999999999999999999987777777999999999999999999999999997  89999999984   68999


Q ss_pred             HHHHHHHhcCCCCcccchhhhhhcccccCCCCcCcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCce
Q psy4949         157 NDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEV  236 (275)
Q Consensus       157 ~eFl~~~~~d~~Pq~lvWL~~~~r~~~~~~~~h~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m  236 (275)
                      .+|++|+  ..+||+|||||++||+..+|.++|..+|.+|+++||+|+||||++|+|||+|+.||..|+++++|+.+|||
T Consensus       572 ~~f~dw~--~~epqsmVwL~vlhRv~~aE~~kH~~kCniCk~~pIvG~RyR~l~~fn~dlCq~CF~sgraak~hk~~~pM  649 (966)
T KOG4286|consen  572 ALFLDWM--RLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRAAKGHKMHYPM  649 (966)
T ss_pred             HHHHHHh--ccCcchhhHHHHHHHHHHHHHHHhhhhcchhhhCccceeeeeehhhcChhHHhhHhhhcccccCCCCCCCc
Confidence            9999999  45699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCCCChhhhhhhhHHHHHhhhcc------cceeceeecc
Q psy4949         237 KENHPVNKLVTRYANHFAVFRKKLKP------TIYHGFLRSQ  272 (275)
Q Consensus       237 ~e~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  272 (275)
                      .|||++..+..+..+|-++++||...      .-..||+.-|
T Consensus       650 ~Ey~~~tts~~d~rdfak~L~nkfr~~~~~a~~~rrGylpvq  691 (966)
T KOG4286|consen  650 VEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRRGYLPVQ  691 (966)
T ss_pred             eeeeCCCCChhhHHHHHHHHHhhhccchhhhcccccCCccch
Confidence            99999999999998888899887774      3456777655

>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions

Probab=99.96  E-value=1e-29  Score=195.24  Aligned_cols=87  Identities=47%  Similarity=0.797  Sum_probs=73.9

Q ss_pred             hhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---CCcccHHHHHHHHhcCCCCc
Q psy4949          94 LMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---NGKVTVNDFMDTMMSEPGPA  170 (275)
Q Consensus        94 l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---d~~Is~~eFl~~~~~d~~Pq  170 (275)
                      |+|||||+|++++|+||+|++++|+.+|+++++||+++||.++||+.|++|++||++   ..+|++++|++|+++|  ||
T Consensus         1 L~dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~~~~~I~~~~Fl~wl~~e--Pq   78 (90)
T PF09069_consen    1 LEDKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQLSPKITENQFLDWLMSE--PQ   78 (90)
T ss_dssp             HHHHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTTT-S-B-HHHHHHHHHT----T
T ss_pred             ChHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccCCCCccCHHHHHHHHHhC--CC
Confidence            689999999999999999999999999999999999999999999999999999998   6899999999999987  89


Q ss_pred             ccchhhhhhccc
Q psy4949         171 CLIWLPLLHRLT  182 (275)
Q Consensus       171 ~lvWL~~~~r~~  182 (275)
                      ++||||++||++
T Consensus        79 ~lVWLP~lhRlA   90 (90)
T PF09069_consen   79 SLVWLPTLHRLA   90 (90)
T ss_dssp             TTTHHHHHHHHH
T ss_pred             eeeHHHHHhhcC
Confidence            999999999985

The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.

>KOG0044|consensus

Probab=99.94  E-value=2.3e-26  Score=199.94  Aligned_cols=138  Identities=17%  Similarity=0.328  Sum_probs=117.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHH------------HHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcC
Q psy4949          24 SDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLS------------GLLLNWLLSAYSVESLGRIRVFSIKVALATMCS   91 (275)
Q Consensus        24 ~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~------------~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~   91 (275)
                      +..+..+    |+.||++|.++||+ |.++.+++.            +.++.+||++||.|++|.|+|.||++|||++++
T Consensus        21 t~f~~~e----i~~~Yr~Fk~~cP~-G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r   95 (193)
T KOG0044|consen   21 TKFSKKE----IQQWYRGFKNECPS-GRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR   95 (193)
T ss_pred             cCCCHHH----HHHHHHHhcccCCC-CccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC
Confidence            3455556    99999999999998 677766544            456777999999999999999999999999999


Q ss_pred             CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          92 GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        92 G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      |++++|++|+|+|| .|+||+|||.||..+++++++|.....-...-..+++.|+.+|.+     ||.||++||++++.+
T Consensus        96 Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~  175 (193)
T KOG0044|consen   96 GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA  175 (193)
T ss_pred             CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence            99999999999999 799999999999999999999976422111223348899999997     799999999999998


Q ss_pred             C
Q psy4949         166 E  166 (275)
Q Consensus       166 d  166 (275)
                      |
T Consensus       176 d  176 (193)
T KOG0044|consen  176 D  176 (193)
T ss_pred             C
Confidence            8

>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions

Probab=99.89  E-value=2.9e-23  Score=169.89  Aligned_cols=89  Identities=55%  Similarity=0.863  Sum_probs=72.2

Q ss_pred             CcchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccC---hHHHHHHHHHHHHHhhcCCCCCee
Q psy4949           1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVH---VEVLSGLLLNWLLSAYSVESLGRI   77 (275)
Q Consensus         1 hlvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~---~~~~~~l~~~~lf~~fD~~~~G~I   77 (275)
                      |+||+|+|+|+|++|||++. ++..|+++|++++|++||++++++.|+..+++   ++.|+++++|||+++||++|+|+|
T Consensus        36 ~lv~l~~v~~~f~~~~l~~~-~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I  114 (127)
T PF09068_consen   36 DLVDLSNVIEAFREHGLNQS-NDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKI  114 (127)
T ss_dssp             GG--HHHHHHHHHHTT---T--TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEE
T ss_pred             eeeeHHHHHHHHHHcCCCcc-cCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCee
Confidence            79999999999999999998 35569999999999999999999999865555   679999999999999999999999


Q ss_pred             ehHHHHHHHHHhc
Q psy4949          78 RVFSIKVALATMC   90 (275)
Q Consensus        78 ~~~ef~~aLs~Lc   90 (275)
                      +|+|||+||++||
T Consensus       115 ~vls~KvaL~~Lc  127 (127)
T PF09068_consen  115 RVLSFKVALITLC  127 (127)
T ss_dssp             EHHHHHHHHHHTS
T ss_pred             ehhHHHHHHHHhC
Confidence            9999999999998

The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.

>cd02334 ZZ_dystrophin Zinc finger, ZZ type

Probab=99.82  E-value=6.3e-21  Score=130.84  Aligned_cols=49  Identities=45%  Similarity=0.992  Sum_probs=47.8

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN  239 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~  239 (275)
                      +.||+|++.||.|.||||++|.|||||+.||+.|.+++.|+.+|||+||
T Consensus         1 ~~Cd~C~~~pi~g~RykC~~C~d~DLC~~Cf~~g~~~~~H~~~Hp~~e~   49 (49)
T cd02334           1 AKCNICKEFPITGFRYRCLKCFNYDLCQSCFFSGRTSKSHKNSHPMKEY   49 (49)
T ss_pred             CCCCCCCCCCceeeeEECCCCCCcCchHHHHhCCCcCCCCCCCCCeecC
Confidence            5899999999999999999999999999999999999999999999997

Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane glycoprotein complex in muscle cells. The ZZ domain in dystrophin has been shown to be essential for binding to the membrane protein beta-dystroglycan.

>cd02345 ZZ_dah Zinc finger, ZZ type

Probab=99.69  E-value=1.7e-17  Score=114.05  Aligned_cols=49  Identities=31%  Similarity=0.790  Sum_probs=46.6

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN  239 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~  239 (275)
                      +.|++|+..||.|.||+|++|.|||||++||+.|.+++.|+.+|||+|.
T Consensus         1 ~~C~~C~~~~i~g~R~~C~~C~dydLC~~Cf~~~~~~~~H~~~H~~~~~   49 (49)
T cd02345           1 LSCSACRKQDISGIRFPCQVCRDYSLCLGCYTKGRETKRHNSLHIMYEL   49 (49)
T ss_pred             CcCCCCCCCCceEeeEECCCCCCcCchHHHHhCCCcCCCCCCCCCcccC
Confidence            4799999999999999999999999999999999999999999999873

Zinc finger present in Drosophila dah and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dah (discontinuous actin hexagon) is a membrane associated protein essential for cortical furrow formation in Drosophila.

>cd02343 ZZ_EF Zinc finger, ZZ type

Probab=99.68  E-value=2.2e-17  Score=112.17  Aligned_cols=47  Identities=36%  Similarity=0.861  Sum_probs=44.3

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      +.||+|.. .+.|.||||++|+|||||++||+.|.+++.|+.+|||+-
T Consensus         1 i~CdgC~~-~~~~~RykCl~C~d~DlC~~Cf~~g~~~~~H~~~Hpm~~   47 (48)
T cd02343           1 ISCDGCDE-IAPWHRYRCLQCTDMDLCKTCFLGGVKPEGHEDDHEMVN   47 (48)
T ss_pred             CCCCCCCC-cCCCceEECCCCCCchhHHHHHhCCccCCCCCCCCCccc
Confidence            57999998 689999999999999999999999999999999999974

Zinc finger present in proteins with an EF_hand motif. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.

>cd02338 ZZ_PCMF_like Zinc finger, ZZ type

Probab=99.67  E-value=4.7e-17  Score=111.89  Aligned_cols=48  Identities=33%  Similarity=0.962  Sum_probs=45.9

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      +.||+|++.||.|.||+|++|.|||||++||+.|.+++.|+.+|||+.
T Consensus         1 i~C~~C~~~~i~g~R~~C~~C~d~dlC~~Cf~~~~~~~~H~~~H~~~~   48 (49)
T cd02338           1 VSCDGCGKSNFTGRRYKCLICYDYDLCADCYDSGVTTERHLFDHPMQC   48 (49)
T ss_pred             CCCCCCcCCCcEEeeEEeCCCCCCccchhHHhCCCcCCCCCCCCCEEE
Confidence            579999988999999999999999999999999999999999999975

Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel modulatory factor 1 or FIGC has been shown to possess intrinsic E3 ubiquitin ligase activity and to promote ubiquitination.

>cd02339 ZZ_Mind_bomb Zinc finger, ZZ type

Probab=99.63  E-value=2.1e-16  Score=106.59  Aligned_cols=45  Identities=36%  Similarity=1.036  Sum_probs=41.8

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN  239 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~  239 (275)
                      +.||+|+..||.|.||||++|.|||||++||.    .+.|+.+|||.+|
T Consensus         1 i~Cd~C~~~~i~G~RykC~~C~dyDLC~~C~~----~~~H~~~H~f~r~   45 (45)
T cd02339           1 IICDTCRKQGIIGIRWKCAECPNYDLCTTCYH----GDKHDLEHRFYRY   45 (45)
T ss_pred             CCCCCCCCCCcccCeEECCCCCCccchHHHhC----CCCCCCCCCEEeC
Confidence            57999999899999999999999999999996    4679999999986

Zinc finger present in Drosophila Mind bomb (D-mib) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Mind bomb is an E3 ubiqitin ligase that has been shown to regulate signaling by the Notch ligand Delta in Drosophila melanogaster.

>cd02344 ZZ_HERC2 Zinc finger, ZZ type

Probab=99.61  E-value=5e-16  Score=104.54  Aligned_cols=44  Identities=32%  Similarity=0.854  Sum_probs=40.2

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      |.||+|++.||.|.||||++|.|||||+.||..    +.|+..|++.+
T Consensus         1 V~Cd~C~~~pI~G~RykC~~C~dyDLC~~Cf~~----~~H~~~H~F~r   44 (45)
T cd02344           1 VTCDGCQMFPINGPRFKCRNCDDFDFCENCFKT----RKHNTRHTFGR   44 (45)
T ss_pred             CCCCCCCCCCCccCeEECCCCCCccchHHhhCC----CCcCCCCceee
Confidence            689999999999999999999999999999965    57889998865

Zinc finger present in HERC2 and related proteins. HERC2 is a potential E3 ubiquitin protein ligase and/or guanine nucleotide exchange factor. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.

>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type

Probab=99.58  E-value=1.4e-15  Score=103.99  Aligned_cols=45  Identities=36%  Similarity=0.941  Sum_probs=42.0

Q ss_pred             cccCcCCCCccccceeeeccCC--CCccchhhhhCCcccCCCCCCCceee
Q psy4949         191 IACDACGRANFVGFRYRCAKCG--NFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~--~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      ..||+|++.||.|.||+|++|.  |||||+.||++|.   .|+.+|+|..
T Consensus         1 y~Cd~C~~~pI~G~R~~C~~C~~~d~DlC~~C~~~~~---~H~~~H~~~~   47 (48)
T cd02341           1 FKCDSCGIEPIPGTRYHCSECDDGDFDLCQDCVVKGE---SHQEDHWLVK   47 (48)
T ss_pred             CCCCCCCCCccccceEECCCCCCCCCccCHHHHhCcC---CCCCCCceee
Confidence            4799999999999999999999  9999999999876   8999999975

Zinc finger present in ZZZ3 (ZZ finger containing 3) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.

>cd02340 ZZ_NBR1_like Zinc finger, ZZ type

Probab=99.55  E-value=2.9e-15  Score=100.23  Aligned_cols=42  Identities=36%  Similarity=0.909  Sum_probs=38.8

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      +.||+|+. ||.|.||+|++|+|||||+.||..+    .| ..|||..
T Consensus         1 v~Cd~C~~-~i~G~ry~C~~C~d~dLC~~C~~~~----~H-~~H~f~~   42 (43)
T cd02340           1 VICDGCQG-PIVGVRYKCLVCPDYDLCESCEAKG----VH-PEHAMLK   42 (43)
T ss_pred             CCCCCCCC-cCcCCeEECCCCCCccchHHhhCcC----CC-CCCCEEe
Confidence            58999998 9999999999999999999999765    78 9999975

Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears to control the multiplication of sigma rhabdovirus. NBR1 (Next to BRCA1 gene 1 protein) interacts with fasciculation and elongation protein zeta-1 (FEZ1) and calcium and integrin binding protein (CIB), and may function in cell signalling pathways. Sequestosome 1 is a phosphotyrosine independent ligand for the Lck SH2 domain and binds noncovalently to ubiquitin via its UBA domain.

>cd02335 ZZ_ADA2 Zinc finger, ZZ type

Probab=99.54  E-value=5.6e-15  Score=101.58  Aligned_cols=47  Identities=34%  Similarity=0.774  Sum_probs=44.8

Q ss_pred             ccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceee
Q psy4949         192 ACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE  238 (275)
Q Consensus       192 ~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e  238 (275)
                      .||+|...++.|.||+|++|.|||||++||+.|.+++.|+.+|+|+-
T Consensus         2 ~Cd~C~~~~~~g~r~~C~~C~d~dLC~~Cf~~g~~~~~H~~~H~~~~   48 (49)
T cd02335           2 HCDYCSKDITGTIRIKCAECPDFDLCLECFSAGAEIGKHRNDHNYRV   48 (49)
T ss_pred             CCCCcCCCCCCCcEEECCCCCCcchhHHhhhCcCCCCCCCCCCCeEe
Confidence            69999998999999999999999999999999999999999999874

Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.

>PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.49  E-value=8.1e-15  Score=99.47  Aligned_cols=44  Identities=39%  Similarity=1.028  Sum_probs=34.4

Q ss_pred             CcCcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCC
Q psy4949         188 SHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHN  231 (275)
Q Consensus       188 ~h~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~  231 (275)
                      ++++.||+|+..||.|.||+|++|+|||||+.||..|+.+..|+
T Consensus         2 h~~~~C~~C~~~~i~g~Ry~C~~C~d~dLC~~C~~~g~~~~~H~   45 (46)
T PF00569_consen    2 HHGYTCDGCGTDPIIGVRYHCLVCPDYDLCEDCFSKGRHSHNHK   45 (46)
T ss_dssp             CSSCE-SSS-SSSEESSEEEESSSSS-EEEHHHHHH--H-SSSS
T ss_pred             CCCeECcCCCCCcCcCCeEECCCCCCCchhhHHHhCcCCCCCcC
Confidence            34899999999999999999999999999999999887766664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents ZZ-type zinc finger domains, named because of their ability to bind two zinc ions []. These domains contain 4-6 Cys residues that participate in zinc binding (plus additional Ser/His residues), including a Cys-X2-Cys motif found in other zinc finger domains. These zinc fingers are thought to be involved in protein-protein interactions. The structure of the ZZ domain shows that it belongs to the family of cross-brace zinc finger motifs that include the PHD, RING, and FYVE domains []. ZZ-type zinc finger domains are found in: Transcription factors P300 and CBP. Plant proteins involved in light responses, such as Hrb1. E3 ubiquitin ligases MEX and MIB2 (6.3.2 from EC). Dystrophin and its homologues. Single copies of the ZZ zinc finger occur in the transcriptional adaptor/coactivator proteins P300, in cAMP response element-binding protein (CREB)-binding protein (CBP) and ADA2. CBP provides several binding sites for transcriptional coactivators. The site of interaction with the tumour suppressor protein p53 and the oncoprotein E1A with CBP/P300 is a Cys-rich region that incorporates two zinc-binding motifs: ZZ-type and TAZ2-type. The ZZ-type zinc finger of CBP contains two twisted anti-parallel beta-sheets and a short alpha-helix, and binds two zinc ions []. One zinc ion is coordinated by four cysteine residues via 2 Cys-X2-Cys motifs, and the third zinc ion via a third Cys-X-Cys motif and a His-X-His motif. The first zinc cluster is strictly conserved, whereas the second zinc cluster displays variability in the position of the two His residues. In Arabidopsis thaliana (Mouse-ear cress), the hypersensitive to red and blue 1 (Hrb1) protein, which regulating both red and blue light responses, contains a ZZ-type zinc finger domain []. ZZ-type zinc finger domains have also been identified in the testis-specific E3 ubiquitin ligase MEX that promotes death receptor-induced apoptosis []. MEX has four putative zinc finger domains: one ZZ-type, one SWIM-type and two RING-type. The region containing the ZZ-type and RING-type zinc fingers is required for interaction with UbcH5a and MEX self-association, whereas the SWIM domain was critical for MEX ubiquitination. In addition, the Cys-rich domains of dystrophin, utrophin and an 87kDa post-synaptic protein contain a ZZ-type zinc finger with high sequence identity to P300/CBP ZZ-type zinc fingers. In dystrophin and utrophin, the ZZ-type zinc finger lies between a WW domain (flanked by and EF hand) and the C-terminal coiled-coil domain. Dystrophin is thought to act as a link between the actin cytoskeleton and the extracellular matrix, and perturbations of the dystrophin-associated complex, for example, between dystrophin and the transmembrane glycoprotein beta-dystroglycan, may lead to muscular dystrophy. Dystrophin and its autosomal homologue utrophin interact with beta-dystroglycan via their C-terminal regions, which are comprised of a WW domain, an EF hand domain and a ZZ-type zinc finger domain []. The WW domain is the primary site of interaction between dystrophin or utrophin and dystroglycan, while the EF hand and ZZ-type zinc finger domains stabilise and strengthen this interaction. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1TOT_A 2DIP_A 2FC7_A 2E5R_A.

>cd02249 ZZ Zinc finger, ZZ type

Probab=99.44  E-value=8.1e-14  Score=94.53  Aligned_cols=46  Identities=37%  Similarity=0.951  Sum_probs=42.2

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeee
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN  239 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~  239 (275)
                      ..||+|+. ||.|.||+|.+|.|||||+.||+.+.  +.|+.+|+|.++
T Consensus         1 ~~C~~C~~-~i~g~r~~C~~C~d~dLC~~Cf~~~~--~~H~~~H~~~~~   46 (46)
T cd02249           1 YSCDGCLK-PIVGVRYHCLVCEDFDLCSSCYAKGK--KGHPPDHSFTEI   46 (46)
T ss_pred             CCCcCCCC-CCcCCEEECCCCCCCcCHHHHHCcCc--CCCCCCCCEeEC
Confidence            36999999 99999999999999999999999876  789999999763

Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have other zinc-binding motifs as well, and the majority serve as scaffolds in pathways involving acetyltransferase, protein kinase, or ubiqitin-related activity. ZZ proteins can be grouped into the following functional classes: chromatin modifying, cytoskeletal scaffolding, ubiquitin binding or conjugating, and membrane receptor or ion-channel modifying proteins.

>cd02342 ZZ_UBA_plant Zinc finger, ZZ type

Probab=99.43  E-value=5.2e-14  Score=92.90  Aligned_cols=33  Identities=33%  Similarity=0.821  Sum_probs=31.5

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhC
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWW  223 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~  223 (275)
                      +.||+|++.||.|.||||++|.|||||+.||.+
T Consensus         1 I~CDgCg~~PI~G~RykC~~C~dyDLC~~C~~~   33 (43)
T cd02342           1 IQCDGCGVLPITGPRYKSKVKEDYDLCTICFSR   33 (43)
T ss_pred             CCCCCCCCCcccccceEeCCCCCCccHHHHhhh
Confidence            579999999999999999999999999999975

Zinc finger present in plant ubiquitin-associated (UBA) proteins. The ZZ motif coordinates a zinc ion and most likely participates in ligand binding or molecular scaffolding.

>smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein

Probab=99.39  E-value=2.4e-13  Score=91.35  Aligned_cols=43  Identities=42%  Similarity=1.103  Sum_probs=39.3

Q ss_pred             CcCcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCC
Q psy4949         188 SHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHN  231 (275)
Q Consensus       188 ~h~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~  231 (275)
                      .|.+.|++|+. ||.|.||+|+.|.|||||++||+.|++++.|.
T Consensus         2 ~~~~~C~~C~~-~i~g~ry~C~~C~d~dlC~~Cf~~~~~~~~h~   44 (44)
T smart00291        2 HHSYSCDTCGK-PIVGVRYHCLVCPDYDLCQSCFAKGSAGGEHE   44 (44)
T ss_pred             CCCcCCCCCCC-CCcCCEEECCCCCCccchHHHHhCcCcCCCCC
Confidence            46899999999 99999999999999999999999988777663

Putative zinc-binding domain present in dystrophin-like proteins, and CREB-binding protein/p300 homologues. The ZZ in dystrophin appears to bind calmodulin. A missense mutation of one of the conserved cysteines in dystrophin results in a patient with Duchenne muscular dystrophy [3].

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.35  E-value=1.8e-11  Score=103.73  Aligned_cols=128  Identities=13%  Similarity=0.197  Sum_probs=102.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCC-CCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPV-SQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATMC   90 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~-~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc   90 (275)
                      ...++..|    ++.||++|....|+ +|.|+..+..++           .++-|++++|. ++|.|+|.+|..+++...
T Consensus        11 ~~~~t~~q----i~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~   85 (160)
T COG5126          11 FTQLTEEQ----IQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL   85 (160)
T ss_pred             cccCCHHH----HHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence            45677778    88888888887772 356666655554           46679999999 999999999999999988


Q ss_pred             -CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHH
Q psy4949          91 -SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTM  163 (275)
Q Consensus        91 -~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~  163 (275)
                       ++..++|++|+|++| .|++|.|+..+|..+|+.       +||..    +++.|+..+.     ++|.|+.++|.+.+
T Consensus        86 ~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~-------lge~~----~deev~~ll~~~d~d~dG~i~~~eF~~~~  154 (160)
T COG5126          86 KRGDKEEELREAFKLFDKDHDGYISIGELRRVLKS-------LGERL----SDEEVEKLLKEYDEDGDGEIDYEEFKKLI  154 (160)
T ss_pred             ccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHh-------hcccC----CHHHHHHHHHhcCCCCCceEeHHHHHHHH
Confidence             888999999999999 799999999999887773       45532    3555655544     37999999999988


Q ss_pred             hcC
Q psy4949         164 MSE  166 (275)
Q Consensus       164 ~~d  166 (275)
                      +.+
T Consensus       155 ~~~  157 (160)
T COG5126         155 KDS  157 (160)
T ss_pred             hcc
Confidence            765

>KOG1280|consensus

Probab=99.30  E-value=1e-12  Score=121.41  Aligned_cols=56  Identities=27%  Similarity=0.716  Sum_probs=53.2

Q ss_pred             Cc-CcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCCC
Q psy4949         188 SH-PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVN  243 (275)
Q Consensus       188 ~h-~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~~  243 (275)
                      .| +|.||||.+..+.|.||||+.|.|||||..||..|.+..-|..+|||+.+++..
T Consensus         5 rHe~v~CdgC~k~~~t~rrYkCL~C~DyDlC~sCyen~~tt~~H~~dHPmqcil~~~   61 (381)
T KOG1280|consen    5 RHEGVSCDGCGKTAFTFRRYKCLRCSDYDLCFSCYENGATTPIHDEDHPMQCILSRV   61 (381)
T ss_pred             CcCCceeccccccceeeeeeEeeeecchhHHHHHhhcCCCCcccCCCCceeEEeecc
Confidence            47 899999999999999999999999999999999999999999999999998764

>KOG0034|consensus

Probab=99.28  E-value=5e-11  Score=103.72  Aligned_cols=133  Identities=16%  Similarity=0.292  Sum_probs=99.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHhhcCC--CCCccChHHHH-------HHHHHHHHHhhcCCCCCe-eehHHHHHHHHHhcCC-
Q psy4949          24 SDVSVARFETLLSSLYHNLNKRLP--VSQQVHVEVLS-------GLLLNWLLSAYSVESLGR-IRVFSIKVALATMCSG-   92 (275)
Q Consensus        24 ~~l~~~~l~~~L~~lY~~~~k~~P--~~~~v~~~~~~-------~l~~~~lf~~fD~~~~G~-I~~~ef~~aLs~Lc~G-   92 (275)
                      +.++.+|    +..||..|.|-.+  ..+.++.++..       ..+...++..||++++|. |+|.+|+-+|++.... 
T Consensus        25 ~~fs~~E----I~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~  100 (187)
T KOG0034|consen   25 TQFSANE----IERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA  100 (187)
T ss_pred             cccCHHH----HHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence            4578778    5555555555322  33566655544       446778999999999999 9999999999999955 


Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCC--CCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f--~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ...+|++++|++| .|++|+|+|+++..++..+      +++...-  ..-+..++..|..     ||.||.+||...+.
T Consensus       101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~------~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~  174 (187)
T KOG0034|consen  101 SKREKLRFAFRVYDLDGDGFISREELKQILRMM------VGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE  174 (187)
T ss_pred             cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH------HccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            5555999999999 6999999999999888765      3332221  1114567777775     79999999999886


Q ss_pred             cC
Q psy4949         165 SE  166 (275)
Q Consensus       165 ~d  166 (275)
                      +.
T Consensus       175 ~~  176 (187)
T KOG0034|consen  175 KQ  176 (187)
T ss_pred             cC
Confidence            65

>KOG4582|consensus

Probab=99.18  E-value=1.4e-11  Score=113.34  Aligned_cols=47  Identities=32%  Similarity=0.911  Sum_probs=42.3

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecC
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHP  241 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~  241 (275)
                      +.||.|...+|+|.||||+.|.|||||+.|+.    ...|+..|.|.+..+
T Consensus       153 v~CD~C~~~~IvG~RyKC~~C~dYDLCe~Ce~----~~~~h~~H~~lR~~t  199 (278)
T KOG4582|consen  153 VPCDNCGKPGIVGARYKCTVCPDYDLCERCEA----GNEHHAAHAMLRLHT  199 (278)
T ss_pred             ccCCCccCCccccceeeecCCCccchhHHhhc----CCCCCcccceeeccc
Confidence            89999999999999999999999999999993    225999999999544

>cd02337 ZZ_CBP Zinc finger, ZZ type

Probab=98.79  E-value=2.6e-09  Score=70.65  Aligned_cols=30  Identities=27%  Similarity=0.956  Sum_probs=27.3

Q ss_pred             ccCcCCCCccccceeeeccCCCCccchhhhhC
Q psy4949         192 ACDACGRANFVGFRYRCAKCGNFQMCQECFWW  223 (275)
Q Consensus       192 ~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~  223 (275)
                      .||+|..  +.|.||+|..|.|||||..||.+
T Consensus         2 ~C~~C~~--~~~~r~~C~~C~dfDLC~~C~~~   31 (41)
T cd02337           2 TCNECKH--HVETRWHCTVCEDYDLCITCYNT   31 (41)
T ss_pred             cCCCCCC--cCCCceECCCCcchhhHHHHhCC
Confidence            6999976  67899999999999999999965

Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that provides binding sites for transcriptional coactivators, the role of the ZZ domain in CBP/p300 is unclear.

>PTZ00184 calmodulin; Provisional

Probab=98.75  E-value=3.4e-07  Score=74.31  Aligned_cols=93  Identities=18%  Similarity=0.293  Sum_probs=72.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      +..+++.+|.+++|.|++.+|+.++..... ....++++.+|+.| .|++|.|++.++..+++.+       +    +..
T Consensus        49 ~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-------~----~~~  117 (149)
T PTZ00184         49 LQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNL-------G----EKL  117 (149)
T ss_pred             HHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH-------C----CCC
Confidence            467899999999999999999999987653 45667889999999 6899999999998888753       1    112


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|..     ++.|+.+||+..+..
T Consensus       118 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  148 (149)
T PTZ00184        118 TDEEVDEMIREADVDGDGQINYEEFVKMMMS  148 (149)
T ss_pred             CHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence            34445555543     689999999987753

>PTZ00183 centrin; Provisional

Probab=98.74  E-value=3.9e-07  Score=75.07  Aligned_cols=131  Identities=15%  Similarity=0.225  Sum_probs=89.9

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+...-+   .+..|+..++..+|+.+    .      ...+.+     .+.-+++.+|.+++|.|++.+|+.++
T Consensus        18 ~~~~~F~~~D~~---~~G~i~~~e~~~~l~~~----g------~~~~~~-----~~~~l~~~~d~~~~g~i~~~eF~~~~   79 (158)
T PTZ00183         18 EIREAFDLFDTD---GSGTIDPKELKVAMRSL----G------FEPKKE-----EIKQMIADVDKDGSGKIDFEEFLDIM   79 (158)
T ss_pred             HHHHHHHHhCCC---CCCcccHHHHHHHHHHh----C------CCCCHH-----HHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            344555554433   34567777755555433    0      011111     25578899999999999999999998


Q ss_pred             HHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHH
Q psy4949          87 ATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDF  159 (275)
Q Consensus        87 s~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eF  159 (275)
                      .... .....+.++.+|+.+ .|++|.|++.+|..+++.+       |+.    -++..++..|.     ++|.|+.++|
T Consensus        80 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-------~~~----l~~~~~~~~~~~~d~~~~g~i~~~ef  148 (158)
T PTZ00183         80 TKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKEL-------GET----ITDEELQEMIDEADRNGDGEISEEEF  148 (158)
T ss_pred             HHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------CCC----CCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            8764 445667899999999 5889999999998888753       211    13444555553     2688999999


Q ss_pred             HHHHhcC
Q psy4949         160 MDTMMSE  166 (275)
Q Consensus       160 l~~~~~d  166 (275)
                      +..+..+
T Consensus       149 ~~~~~~~  155 (158)
T PTZ00183        149 YRIMKKT  155 (158)
T ss_pred             HHHHhcc
Confidence            9988665

>KOG0027|consensus

Probab=98.68  E-value=1.8e-07  Score=78.14  Aligned_cols=120  Identities=23%  Similarity=0.314  Sum_probs=85.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChh-----hH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLM-----DK   97 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~-----dK   97 (275)
                      +..++..+|..+++.+-..     |+     ..+     +.-+++-+|.+++|.|++.+|+..+.........     +.
T Consensus        22 ~G~i~~~el~~~lr~lg~~-----~t-----~~e-----l~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e   86 (151)
T KOG0027|consen   22 DGKISVEELGAVLRSLGQN-----PT-----EEE-----LRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE   86 (151)
T ss_pred             CCcccHHHHHHHHHHcCCC-----CC-----HHH-----HHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence            3668888977777665533     32     122     3567889999999999999999999877765443     38


Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh-cCCCcccHHHHHHHHh
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF-SGNGKVTVNDFMDTMM  164 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF-~~d~~Is~~eFl~~~~  164 (275)
                      ++-+|++| .|++|+||..+|..+|+.+       |+..+....+..++..- .+||.|+.++|+..+.
T Consensus        87 l~eaF~~fD~d~~G~Is~~el~~~l~~l-------g~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~  148 (151)
T KOG0027|consen   87 LKEAFRVFDKDGDGFISASELKKVLTSL-------GEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMS  148 (151)
T ss_pred             HHHHHHHHccCCCCcCcHHHHHHHHHHh-------CCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence            99999999 7999999999999888764       55433111122333321 2479999999999764

>cd02336 ZZ_RSC8 Zinc finger, ZZ type

Probab=98.51  E-value=1e-07  Score=64.28  Aligned_cols=42  Identities=24%  Similarity=0.633  Sum_probs=37.9

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCC
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLE  233 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~  233 (275)
                      ..|+.|+. ..+..||+|+++.+||||..||..|+.+.+|...
T Consensus         1 y~C~~Cg~-D~t~vryh~~~~~~~dLC~~CF~~G~f~~~~~s~   42 (45)
T cd02336           1 YHCFTCGN-DCTRVRYHNLKAKKYDLCPSCYQEGRFPSNFQSS   42 (45)
T ss_pred             CcccCCCC-ccCceEEEecCCCccccChHHHhCcCCCCCCccc
Confidence            36999998 7788999999999999999999999999888754

Zinc finger present in RSC8 and related proteins. RSC8 is a component of the RSC complex, which is closely related to the SWI/SNF complex and is involved in remodeling chromatin structure. The ZZ motif coordinates a zinc ion and most likely participates in ligand binding or molecular scaffolding.

>KOG0457|consensus

Probab=98.43  E-value=1.2e-07  Score=90.59  Aligned_cols=51  Identities=29%  Similarity=0.757  Sum_probs=46.5

Q ss_pred             CcccCcCCCCccccce-eeeccCCCCccchhhhhCCcccCCCCCCCceeeecC
Q psy4949         190 PIACDACGRANFVGFR-YRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHP  241 (275)
Q Consensus       190 ~~~Cd~C~~~pI~G~R-ykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~  241 (275)
                      ...|++|.. .|.|.. .||..|+|||||..||+.|.+.+.|+.+||+.-..+
T Consensus        14 ky~C~~C~~-dit~~i~ikCaeCp~fdLCl~CFs~GaE~~~H~~~H~Yrim~~   65 (438)
T KOG0457|consen   14 KYNCDYCSL-DITGLIRIKCAECPDFDLCLQCFSVGAETGKHQNDHPYRIMDT   65 (438)
T ss_pred             CCCCccHhH-HhccceEEEeecCCCcchhHHHHhcccccCCCCCCCCceeecC
Confidence            478999998 888885 999999999999999999999999999999876655

>PTZ00183 centrin; Provisional

Probab=98.19  E-value=2.4e-05  Score=64.31  Aligned_cols=109  Identities=13%  Similarity=0.187  Sum_probs=77.7

Q ss_pred             cCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          45 RLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        45 ~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +-|....++.++-..+  .-+|..||++++|+|+..+|..+|..+-.....+.+..+|+.+ .|++|.|+..++..++..
T Consensus         4 ~~~~~~~~~~~~~~~~--~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   81 (158)
T PTZ00183          4 RRSERPGLTEDQKKEI--REAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTK   81 (158)
T ss_pred             cccccCCCCHHHHHHH--HHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            3344334554444333  3568999999999999999999999774444556678899988 689999999999876654


Q ss_pred             HHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         124 VLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       124 i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..  +    .    ...+..++.+|..     +|.|+.+||..++..
T Consensus        82 ~~--~----~----~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~  118 (158)
T PTZ00183         82 KL--G----E----RDPREEILKAFRLFDDDKTGKISLKNLKRVAKE  118 (158)
T ss_pred             Hh--c----C----CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            31  0    0    1134556666664     589999999999864

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.18  E-value=3.7e-06  Score=59.96  Aligned_cols=59  Identities=17%  Similarity=0.262  Sum_probs=50.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC----CChhhHHHHhchhh-ccCCCceeHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEY  120 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~  120 (275)
                      +..+|+.||.+++|.|+..|++.++..+-.    ..+.+.++.+|+.+ .|+||.|+..||..+
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   65 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF   65 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence            357899999999999999999999998874    34556667889999 799999999999764

...

>PLN02964 phosphatidylserine decarboxylase

Probab=98.08  E-value=1.2e-05  Score=81.62  Aligned_cols=71  Identities=8%  Similarity=0.043  Sum_probs=61.8

Q ss_pred             ChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          53 HVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        53 ~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ++.+....++.-+|+.||.+++|.|++.||+..+..+..+..+++++++|+.+ .|++|.|+.+||..+|+.
T Consensus       172 ~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        172 DPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            33344344578899999999999999999999999887778899999999999 699999999999998887

>PTZ00184 calmodulin; Provisional

Probab=98.07  E-value=1.8e-05  Score=64.12  Aligned_cols=92  Identities=14%  Similarity=0.216  Sum_probs=72.2

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT  142 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~  142 (275)
                      -.|..+|++++|.|+..+|..+|..+......+..+.+|+.+ .|++|.|+.+++..++...+..          ...+.
T Consensus        15 ~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~----------~~~~~   84 (149)
T PTZ00184         15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD----------TDSEE   84 (149)
T ss_pred             HHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC----------CcHHH
Confidence            577899999999999999999999887666677889999998 6889999999998776643211          11244


Q ss_pred             HHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         143 LAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       143 ~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+..+|..     +|.|+.++|..++..
T Consensus        85 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~  112 (149)
T PTZ00184         85 EIKEAFKVFDRDGNGFISAAELRHVMTN  112 (149)
T ss_pred             HHHHHHHhhCCCCCCeEeHHHHHHHHHH
Confidence            56666654     588999999998854

>KOG0027|consensus

Probab=98.04  E-value=2.6e-05  Score=65.11  Aligned_cols=98  Identities=13%  Similarity=0.218  Sum_probs=77.1

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|+|+..++..++..|.....++.++-+++.+ .|++|.|+..+|..++.........      .....
T Consensus        11 ~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~------~~~~~   84 (151)
T KOG0027|consen   11 KEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTD------EEASS   84 (151)
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccc------ccccH
Confidence            4689999999999999999999999999999999999999999 6999999999999888754332210      00123


Q ss_pred             HHHhhhhc---C--CCcccHHHHHHHHhcC
Q psy4949         142 TLAQEIFS---G--NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       142 ~~v~~cF~---~--d~~Is~~eFl~~~~~d  166 (275)
                      ..+...|.   .  +|.||.+|+...++.-
T Consensus        85 ~el~eaF~~fD~d~~G~Is~~el~~~l~~l  114 (151)
T KOG0027|consen   85 EELKEAFRVFDKDGDGFISASELKKVLTSL  114 (151)
T ss_pred             HHHHHHHHHHccCCCCcCcHHHHHHHHHHh
Confidence            34444444   3  6899999999987753

>KOG4666|consensus

Probab=98.04  E-value=1.1e-05  Score=75.08  Aligned_cols=144  Identities=19%  Similarity=0.170  Sum_probs=97.8

Q ss_pred             HHHHHHHHHhhcCCCCCc----cC--hHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-
Q psy4949          34 LLSSLYHNLNKRLPVSQQ----VH--VEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-  105 (275)
Q Consensus        34 ~L~~lY~~~~k~~P~~~~----v~--~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-  105 (275)
                      +..-.|.+=++..|.-+.    ++  ++.+ +.+ .-+|..||.+.+|.+|+++.+++|++||+- ...+=++++|++| 
T Consensus       229 ld~y~~var~~kg~~igi~efa~~l~vpvs-d~l-~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~  306 (412)
T KOG4666|consen  229 LDGYVYVAREAKGPDIGIVEFAVNLRVPVS-DKL-APTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFS  306 (412)
T ss_pred             HhhHHHHHHhccCCCcceeEeeeeeecchh-hhh-hhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcc
Confidence            444566666666665332    22  3333 443 478999999999999999999999999986 6778889999999 


Q ss_pred             ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-CCcccHHHHHHHHhcCCCCcc-cchhhhhhcccc
Q psy4949         106 CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-NGKVTVNDFMDTMMSEPGPAC-LIWLPLLHRLTA  183 (275)
Q Consensus       106 ~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-d~~Is~~eFl~~~~~d~~Pq~-lvWL~~~~r~~~  183 (275)
                      ++-||.+.-.+|..||+.++-++.    . +.   .-.-.++=++ +++|+.++|...+...  |.. +..+.++..   
T Consensus       307 v~eDg~~ge~~ls~ilq~~lgv~~----l-~v---~~lf~~i~q~d~~ki~~~~f~~fa~~~--p~~a~~~~~yld~---  373 (412)
T KOG4666|consen  307 VAEDGISGEHILSLILQVVLGVEV----L-RV---PVLFPSIEQKDDPKIYASNFRKFAATE--PNLALSELGYLDK---  373 (412)
T ss_pred             cccccccchHHHHHHHHHhcCcce----e-ec---cccchhhhcccCcceeHHHHHHHHHhC--chhhhhhhccccc---
Confidence            799999999999999987755531    1 00   0111222333 5899999999988665  653 334444332   


Q ss_pred             cCCCCcCcccC
Q psy4949         184 VESTSHPIACD  194 (275)
Q Consensus       184 ~~~~~h~~~Cd  194 (275)
                        .+.|-..|.
T Consensus       374 --~~~H~~s~~  382 (412)
T KOG4666|consen  374 --RIYHATSNG  382 (412)
T ss_pred             --hheeeeecc
Confidence              345545554

>COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]

Probab=97.94  E-value=4.1e-06  Score=77.42  Aligned_cols=53  Identities=25%  Similarity=0.402  Sum_probs=46.2

Q ss_pred             CcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCC
Q psy4949         190 PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV  242 (275)
Q Consensus       190 ~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~  242 (275)
                      .+.||+|...-..-.+.+|..|++||||..||..|...+.|+..|++.-+.+-
T Consensus         5 k~hCdvC~~d~T~~~~i~C~eC~~~DLC~pCF~~g~~tg~H~pyH~YRiietn   57 (432)
T COG5114           5 KIHCDVCFLDMTDLTFIKCNECPAVDLCLPCFVNGIETGVHSPYHGYRIIETN   57 (432)
T ss_pred             eeeehHHHHhhhcceeeeeecccccceehhhhhccccccccCCCCCeeEeecc
Confidence            36799999866666799999999999999999999999999999998766543

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=97.92  E-value=0.00012  Score=62.28  Aligned_cols=73  Identities=11%  Similarity=0.204  Sum_probs=60.4

Q ss_pred             CccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+-+++...+            +.|.|++||.|+||+|++.++.-.|..+---..++-..-+++.+ .|++|.|+.++
T Consensus        70 ~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~e  149 (160)
T COG5126          70 ETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEE  149 (160)
T ss_pred             CccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHH
Confidence            456666655443            34789999999999999999999999777777888889999999 59999999999


Q ss_pred             HHHHHH
Q psy4949         117 FNEYLQ  122 (275)
Q Consensus       117 l~~~L~  122 (275)
                      |..++.
T Consensus       150 F~~~~~  155 (160)
T COG5126         150 FKKLIK  155 (160)
T ss_pred             HHHHHh
Confidence            977654

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=97.86  E-value=1.1e-05  Score=57.57  Aligned_cols=60  Identities=18%  Similarity=0.381  Sum_probs=44.5

Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      |++.+|+.| .|++|.|+++||..+++.+..-..       ....++.++.+|..     +|.|+.+||+.++
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMS-------DEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST-------HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhccccc-------HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            789999999 799999999999988886522110       01124566666764     7999999999864

...

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=97.79  E-value=9.2e-05  Score=50.02  Aligned_cols=59  Identities=17%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                      ..+|+.||.+++|.|++.+|..++..+......+.++.+|..+ .+++|.|+.+++..++
T Consensus         3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           3 REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            4679999999999999999999999998888888899999999 6889999999987654

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=97.75  E-value=4.8e-05  Score=46.47  Aligned_cols=27  Identities=11%  Similarity=0.204  Sum_probs=23.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      ..+|+.||+|+||+|++.||+.++.-|
T Consensus         3 ~~~F~~~D~d~dG~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    3 KEAFREFDKDGDGKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence            578999999999999999999988754

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>KOG0038|consensus

Probab=97.74  E-value=0.00016  Score=60.51  Aligned_cols=103  Identities=13%  Similarity=0.243  Sum_probs=76.2

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCC
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS  138 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~  138 (275)
                      +-..+-.+|-.+|.|.++|..|.-++|++|. ...+=|..|+|++| -|+++.|-...|...|+.+   .+  +|... .
T Consensus        72 fk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l---Tr--~eLs~-e  145 (189)
T KOG0038|consen   72 FKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL---TR--DELSD-E  145 (189)
T ss_pred             HHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH---hh--ccCCH-H
Confidence            3445779999999999999999999999995 57777999999999 6999999999999888765   21  22100 0


Q ss_pred             CchHHHhhhhc-----CCCcccHHHHHHHHhcCCCCcc
Q psy4949         139 YTDTLAQEIFS-----GNGKVTVNDFMDTMMSEPGPAC  171 (275)
Q Consensus       139 ~~e~~v~~cF~-----~d~~Is~~eFl~~~~~d~~Pq~  171 (275)
                      -.+...+.+-+     +||+++..||-..+.+-  |..
T Consensus       146 Ev~~i~ekvieEAD~DgDgkl~~~eFe~~i~ra--PDF  181 (189)
T KOG0038|consen  146 EVELICEKVIEEADLDGDGKLSFAEFEHVILRA--PDF  181 (189)
T ss_pred             HHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhC--cch
Confidence            01122333322     37899999999987654  543

>smart00027 EH Eps15 homology domain

Probab=97.71  E-value=0.00015  Score=55.99  Aligned_cols=65  Identities=15%  Similarity=0.098  Sum_probs=55.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhch
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIP  128 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~  128 (275)
                      +.-+|.+||.+++|.|++.+++.++..+  |-..+..+.+|+.+ .|++|.|+.++|..++..+.++-
T Consensus        12 l~~~F~~~D~d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~   77 (96)
T smart00027       12 YEQIFRSLDKNQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKL   77 (96)
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999873  66677789999998 57899999999999998876663

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=97.64  E-value=8.2e-05  Score=60.08  Aligned_cols=57  Identities=14%  Similarity=0.395  Sum_probs=42.6

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      -.++++|+|..+ .|+||.|+++||..+.     +          +..+..++.+|..     ||.||++||...+.+
T Consensus        46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-----l----------~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~  108 (116)
T cd00252          46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR-----L----------DPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK  108 (116)
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHH-----c----------cchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence            347789999999 6999999999997654     1          1124455555553     799999999998855

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>KOG0037|consensus

Probab=97.63  E-value=0.00079  Score=59.65  Aligned_cols=75  Identities=13%  Similarity=0.170  Sum_probs=53.8

Q ss_pred             CCCCccChHHHHHHHHH---H--HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccC-CCceeHHHHHHH
Q psy4949          47 PVSQQVHVEVLSGLLLN---W--LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDC-NGHLVAWKFNEY  120 (275)
Q Consensus        47 P~~~~v~~~~~~~l~~~---~--lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~-nG~i~~~el~~~  120 (275)
                      +..+.|+..++..|...   |  +|+.||+|++|+|+..|+..||..+----..+=+.-+++.|++. +|.|.-.++.+.
T Consensus       106 ~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~c  185 (221)
T KOG0037|consen  106 DNSGTIGFKEFKALWKYINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQC  185 (221)
T ss_pred             CCCCccCHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHH
Confidence            34567888888887543   4  88888888888888888888888665544555567788888766 787776665443


Q ss_pred             H
Q psy4949         121 L  121 (275)
Q Consensus       121 L  121 (275)
                      +
T Consensus       186 c  186 (221)
T KOG0037|consen  186 C  186 (221)
T ss_pred             H
Confidence            3

>KOG0028|consensus

Probab=97.57  E-value=0.00038  Score=58.96  Aligned_cols=133  Identities=15%  Similarity=0.215  Sum_probs=85.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhcCCC-CCccChHHH-HHHH-H---------HHHHHhhcCCCCCeeehHHHHHHHHH
Q psy4949          21 ELQSDVSVARFETLLSSLYHNLNKRLPV-SQQVHVEVL-SGLL-L---------NWLLSAYSVESLGRIRVFSIKVALAT   88 (275)
Q Consensus        21 ~~~~~l~~~~l~~~L~~lY~~~~k~~P~-~~~v~~~~~-~~l~-~---------~~lf~~fD~~~~G~I~~~ef~~aLs~   88 (275)
                      ++...+...+    =+.|..+|.=-.|. .+.+++++. +.+. +         +-|+.=+|++++|.|+|.+|+..++.
T Consensus        22 ~~~~~l~~~q----~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~   97 (172)
T KOG0028|consen   22 SPKSELTEEQ----KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTV   97 (172)
T ss_pred             CCCccccHHH----HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHH
Confidence            3455555555    33344433322232 246777765 3332 2         23788999999999999999876443


Q ss_pred             -hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC--CCcccHHHHHHHHh
Q psy4949          89 -MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG--NGKVTVNDFMDTMM  164 (275)
Q Consensus        89 -Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~--d~~Is~~eFl~~~~  164 (275)
                       +.-+...+-++.+|++. .|.+|.|+...|..+.+.       +||..+-.--++.++. +..  |+.|+++||+..++
T Consensus        98 k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvake-------LgenltD~El~eMIeE-Ad~d~dgevneeEF~~imk  169 (172)
T KOG0028|consen   98 KLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKE-------LGENLTDEELMEMIEE-ADRDGDGEVNEEEFIRIMK  169 (172)
T ss_pred             HHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHH-------hCccccHHHHHHHHHH-hcccccccccHHHHHHHHh
Confidence             33344778899999999 799999999998665554       4554321111233444 343  68999999999775


Q ss_pred             c
Q psy4949         165 S  165 (275)
Q Consensus       165 ~  165 (275)
                      +
T Consensus       170 ~  170 (172)
T KOG0028|consen  170 K  170 (172)
T ss_pred             c
Confidence            4

>KOG0034|consensus

Probab=97.57  E-value=0.0016  Score=56.77  Aligned_cols=115  Identities=18%  Similarity=0.235  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHH--------HHHHHHHhhcCCCCCccChHHHHHHH------------HHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLL--------SSLYHNLNKRLPVSQQVHVEVLSGLL------------LNW   64 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L--------~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~   64 (275)
                      |.-+.+.|..-..+.  .+..|+..|+..+.        ..|+..|-... ++..|+.++++..+            +.+
T Consensus        32 I~~L~~rF~kl~~~~--~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~-~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~f  108 (187)
T KOG0034|consen   32 IERLYERFKKLDRNN--GDGYLTKEEFLSIPELALNPLADRIIDRFDTDG-NGDPVDFEEFVRLLSVFSPKASKREKLRF  108 (187)
T ss_pred             HHHHHHHHHHhcccc--ccCccCHHHHHHHHHHhcCcHHHHHHHHHhccC-CCCccCHHHHHHHHhhhcCCccHHHHHHH
Confidence            344455555555553  46778888865543        23444443321 21227777776664            346


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChh-------hHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLM-------DKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~-------dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .|++||.+++|.|+..+++..+..+.++...       +....+|.-+ .|++|.|+.+|+..++.
T Consensus       109 aF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~  174 (187)
T KOG0034|consen  109 AFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE  174 (187)
T ss_pred             HHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            9999999999999999999999999985333       4456788888 69999999999987664

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=97.55  E-value=0.00027  Score=49.91  Aligned_cols=59  Identities=17%  Similarity=0.126  Sum_probs=49.7

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      -+|..||++++|.|+..+++.++.-+  |-..+..+.+|+.+ .|++|.|+.+++..++..+
T Consensus         3 ~~F~~~D~~~~G~i~~~el~~~l~~~--g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           3 QIFRSLDPDGDGLISGDEARPFLGKS--GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            47899999999999999999998765  55667788899988 5789999999998777654

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0037|consensus

Probab=97.50  E-value=0.00077  Score=59.73  Aligned_cols=84  Identities=15%  Similarity=0.318  Sum_probs=63.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc-
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT-  140 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~-  140 (275)
                      ..|.++||++.+|+|.|.||+.--..      ..+.|-+|..| .|++|.|+..||..-|..+       |    |.-+ 
T Consensus        97 rlmI~mfd~~~~G~i~f~EF~~Lw~~------i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~-------G----y~Lsp  159 (221)
T KOG0037|consen   97 RLMISMFDRDNSGTIGFKEFKALWKY------INQWRNVFRTYDRDRSGTIDSSELRQALTQL-------G----YRLSP  159 (221)
T ss_pred             HHHHHHhcCCCCCccCHHHHHHHHHH------HHHHHHHHHhcccCCCCcccHHHHHHHHHHc-------C----cCCCH
Confidence            57789999999999999999876553      35678899999 6999999999998766642       1    2222 


Q ss_pred             ---hHHHhhhhcC-CCcccHHHHHHHH
Q psy4949         141 ---DTLAQEIFSG-NGKVTVNDFMDTM  163 (275)
Q Consensus       141 ---e~~v~~cF~~-d~~Is~~eFl~~~  163 (275)
                         +..|++.=.. .+.|..++|++.|
T Consensus       160 q~~~~lv~kyd~~~~g~i~FD~FI~cc  186 (221)
T KOG0037|consen  160 QFYNLLVRKYDRFGGGRIDFDDFIQCC  186 (221)
T ss_pred             HHHHHHHHHhccccCCceeHHHHHHHH
Confidence               3455553223 6899999999966

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=97.44  E-value=0.00052  Score=52.96  Aligned_cols=71  Identities=17%  Similarity=0.116  Sum_probs=54.7

Q ss_pred             ChHHHHHHHHHHHHHhhc-CCCCC-eeehHHHHHHHHHhc-----CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          53 HVEVLSGLLLNWLLSAYS-VESLG-RIRVFSIKVALATMC-----SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        53 ~~~~~~~l~~~~lf~~fD-~~~~G-~I~~~ef~~aLs~Lc-----~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      ..+.|+.-+. -+|..|| .+++| +|+..|++.+|.-..     .-.-.+.+.-+++.+ .|+||.|+-.||..++..+
T Consensus         4 ~le~a~~~~~-~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026           4 QLEGAMDTLI-RIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHH-HHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            3455655544 6799999 78998 699999999996532     222445678899988 6999999999998888765

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=97.41  E-value=0.00033  Score=56.54  Aligned_cols=58  Identities=9%  Similarity=0.122  Sum_probs=49.0

Q ss_pred             HHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          60 LLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        60 l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                      .-+.|.|..+|.|+||.|+..|+....    -+..+....-.|..+ .|++|.||..|+...+
T Consensus        48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          48 DPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            346799999999999999999999755    455567778888888 7999999999997766

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=97.34  E-value=0.00089  Score=50.54  Aligned_cols=69  Identities=14%  Similarity=0.081  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHhhcC--CCCCeeehHHHHHHHHHhcCCC-----hhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYSV--ESLGRIRVFSIKVALATMCSGK-----LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD~--~~~G~I~~~ef~~aLs~Lc~G~-----l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      ++..+- +.-+|..||+  +++|.|+..+++.++....+..     ..+.++.+|+.+ .|++|.|+-++|..++..+
T Consensus         4 ~~~~~~-l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           4 EKAIET-IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHH-HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            444444 3368999999  8999999999999987544333     367788899988 6888999999998888765

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=97.32  E-value=0.0012  Score=50.90  Aligned_cols=69  Identities=16%  Similarity=0.100  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHhhcC-CCCCeeehHHHHHHHHHhcCCChh--hHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYSV-ESLGRIRVFSIKVALATMCSGKLM--DKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD~-~~~G~I~~~ef~~aLs~Lc~G~l~--dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.++.-+. -+|++||+ +++|+|+..|++..|..-.+..+.  +-++.+++.+ .|+||.|+-+||..++..+
T Consensus         4 E~ai~~l~-~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           4 EKAIETLV-SNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHH-HHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            34444444 68999999 999999999999999873333343  3578899888 6999999999998777654

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=97.25  E-value=0.00094  Score=64.53  Aligned_cols=56  Identities=14%  Similarity=0.141  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhc
Q psy4949          59 GLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAI  127 (275)
Q Consensus        59 ~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i  127 (275)
                      .-.+..+|++||.++||.|+..||..             ...+|..+ .|+||.|+.+||..++.+.+++
T Consensus       333 ~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~~  389 (391)
T PRK12309        333 THAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAALRL  389 (391)
T ss_pred             hHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHHh
Confidence            34467899999999999999999942             46789999 6999999999999999988776

>KOG4347|consensus

Probab=97.24  E-value=0.0011  Score=66.63  Aligned_cols=60  Identities=15%  Similarity=0.226  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhc-cCCCceeHHHH
Q psy4949          57 LSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKF  117 (275)
Q Consensus        57 ~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~-D~nG~i~~~el  117 (275)
                      -+..++..+|+.+|.+.+|-|+|.+++.||+.||.|.+.+|++.+|+||. +++ ..++++.
T Consensus       552 ~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~  612 (671)
T KOG4347|consen  552 VSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV  612 (671)
T ss_pred             HHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence            34556778999999999999999999999999999999999999999993 555 6777665

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=97.20  E-value=0.002  Score=49.43  Aligned_cols=61  Identities=13%  Similarity=0.088  Sum_probs=48.7

Q ss_pred             HHHHHhhcC-CC-CCeeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSV-ES-LGRIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~-~~-~G~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ..+|.+||. ++ +|+|+..+++.+|....+     ...++-++.+|+.+ .|++|.|+..+|..++..
T Consensus        11 ~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~   79 (94)
T cd05031          11 ILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG   79 (94)
T ss_pred             HHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            468999997 97 799999999999975332     23445578889888 688999999999877764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=97.16  E-value=0.0025  Score=48.67  Aligned_cols=69  Identities=20%  Similarity=0.170  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHhhc-CCCCC-eeehHHHHHHHHH-h----cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYS-VESLG-RIRVFSIKVALAT-M----CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD-~~~~G-~I~~~ef~~aLs~-L----c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.+.+-+. -+|.+|| .+++| +|+..+++.+|.. +    ......+..+.+|+.+ .|++|.|+-++|..++..+
T Consensus         5 e~~~~~l~-~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           5 ETAMETLI-NVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHH-HHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            44444443 6899997 99999 5999999999964 3    1123456789999998 6889999999998887754

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=97.10  E-value=0.002  Score=44.03  Aligned_cols=51  Identities=18%  Similarity=0.231  Sum_probs=42.6

Q ss_pred             CCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          73 SLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        73 ~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .+|.|+..+|+.+|..+--. --++.++.+|+.+ .|++|.|+..||..+++.
T Consensus         1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            47999999999999777545 5566689999999 799999999999887764

...

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=97.08  E-value=0.0035  Score=47.97  Aligned_cols=62  Identities=15%  Similarity=0.165  Sum_probs=50.7

Q ss_pred             HHHHHhhc-CCCCC-eeehHHHHHHHHH----hcCCChh-hHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYS-VESLG-RIRVFSIKVALAT----MCSGKLM-DKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD-~~~~G-~I~~~ef~~aLs~----Lc~G~l~-dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|++|| ++++| .|+..+++..|..    +.+..+. +.+.-+++.+ .|++|.|+-++|..++..+
T Consensus        11 ~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~   80 (88)
T cd05027          11 IDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV   80 (88)
T ss_pred             HHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            46899998 89999 6999999999997    3444444 4489999988 6889999999998777654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=96.80  E-value=0.003  Score=47.58  Aligned_cols=63  Identities=16%  Similarity=0.213  Sum_probs=45.5

Q ss_pred             hHHHHhchhh-c--cCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQL-C--DCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly-~--D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++-+|..| .  |++|.|+..++..+++..+      |+..+...+++.++.+|..     +|.|+.++|+.++.
T Consensus         8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~------g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~   78 (88)
T cd00213           8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETEL------PNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIG   78 (88)
T ss_pred             HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHh------hhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            4578899999 6  6999999999998887521      2222223355666666643     68999999999875

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>KOG0036|consensus

Probab=96.79  E-value=0.01  Score=57.14  Aligned_cols=93  Identities=17%  Similarity=0.208  Sum_probs=68.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|++-|.|++|++|+.||+--+.     .-+.++.-+|+-+ .++||.|+-.|+-..|+++       |-..++...
T Consensus        53 ~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~-------gi~l~de~~  120 (463)
T KOG0036|consen   53 AKMLFSAMDANRDGRVDYSEFKRYLD-----NKELELYRIFQSIDLEHDGKIDPNEIWRYLKDL-------GIQLSDEKA  120 (463)
T ss_pred             HHHHHHhcccCcCCcccHHHHHHHHH-----HhHHHHHHHHhhhccccCCccCHHHHHHHHHHh-------CCccCHHHH
Confidence            45688999999999999999998887     4577888899988 6999999999999888875       111111111


Q ss_pred             hHHHhhhhcC-CCcccHHHHHHHHhcC
Q psy4949         141 DTLAQEIFSG-NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       141 e~~v~~cF~~-d~~Is~~eFl~~~~~d  166 (275)
                      +..++..|+. .+.|.++||-+.++--
T Consensus       121 ~k~~e~~d~~g~~~I~~~e~rd~~ll~  147 (463)
T KOG0036|consen  121 AKFFEHMDKDGKATIDLEEWRDHLLLY  147 (463)
T ss_pred             HHHHHHhccCCCeeeccHHHHhhhhcC
Confidence            2234444443 4789999999988654

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=96.78  E-value=0.012  Score=45.48  Aligned_cols=74  Identities=12%  Similarity=0.160  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.++|++|...-   .+ ...|+..|+..+|+.=+-.+.+.     +-|++ +    +.-++...|.|+||.|+|.||..
T Consensus         7 i~~lI~~FhkYa---G~-~~tLsk~Elk~Ll~~Elp~~l~~-----~~d~~-~----vd~im~~LD~n~Dg~vdF~EF~~   72 (91)
T cd05024           7 MEKMMLTFHKFA---GE-KNYLNRDDLQKLMEKEFSEFLKN-----QNDPM-A----VDKIMKDLDDCRDGKVGFQSFFS   72 (91)
T ss_pred             HHHHHHHHHHHc---CC-CCcCCHHHHHHHHHHHhHHHHcC-----CCCHH-H----HHHHHHHhCCCCCCcCcHHHHHH
Confidence            567888997765   22 34899999888887766666543     22333 3    45667788999999999999965


Q ss_pred             H---HHHhcCC
Q psy4949          85 A---LATMCSG   92 (275)
Q Consensus        85 a---Ls~Lc~G   92 (275)
                      -   |++.|..
T Consensus        73 Lv~~l~~ac~~   83 (91)
T cd05024          73 LIAGLLIACND   83 (91)
T ss_pred             HHHHHHHHHHH
Confidence            4   4444443

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=96.78  E-value=0.0095  Score=45.58  Aligned_cols=70  Identities=14%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             hHHHHHHHHHHHHHhhcC-CC-CCeeehHHHHHHHHH-hcCC--ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSAYSV-ES-LGRIRVFSIKVALAT-MCSG--KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~fD~-~~-~G~I~~~ef~~aLs~-Lc~G--~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .+.+..-+. -+|..||. ++ +|+|+..||+.+|.- ++-|  ...+-+..+|+.+ .|++|.|+.++|..++..+
T Consensus         5 ~e~~~~~~i-~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l   80 (88)
T cd05029           5 LDQAIGLLV-AIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL   80 (88)
T ss_pred             HHHHHHHHH-HHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            455555544 57999997 77 999999999999963 2223  2455678889888 6899999999998887765

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=96.77  E-value=0.0024  Score=39.02  Aligned_cols=25  Identities=12%  Similarity=0.147  Sum_probs=19.8

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      .-+|+.||.+++|+|++.||..+|.
T Consensus         3 ~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    3 REAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4578888888888888888888887

...

>PLN02964 phosphatidylserine decarboxylase

Probab=96.77  E-value=0.008  Score=61.49  Aligned_cols=87  Identities=14%  Similarity=0.248  Sum_probs=60.9

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhH----HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCC
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDK----LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS  138 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dK----lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~  138 (275)
                      -.|..||+|++|+|    +..++-.+-...+.+.    ++.+|+.+ .|++|.|+.+||..++..+       ++.    
T Consensus       147 eaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~l-------g~~----  211 (644)
T PLN02964        147 ESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAF-------GNL----  211 (644)
T ss_pred             HHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-------ccC----
Confidence            46899999999997    4444443331123333    68899999 5899999999998887642       221    


Q ss_pred             CchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         139 YTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       139 ~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+++.++..|..     +|.|+.+||.+.+..
T Consensus       212 ~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        212 VAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            245556666653     689999999997754

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=96.68  E-value=0.0052  Score=47.28  Aligned_cols=71  Identities=11%  Similarity=0.169  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.+++++|+...-.  +.+..|+.++|..+|++-.       |.  .++...    -+.-+++..|.|+||+|+|.||..
T Consensus         7 i~~l~~~F~~fd~~--~~~g~i~~~ELk~ll~~el-------g~--~ls~~~----~v~~mi~~~D~d~DG~I~F~EF~~   71 (89)
T cd05022           7 IETLVSNFHKASVK--GGKESLTASEFQELLTQQL-------PH--LLKDVE----GLEEKMKNLDVNQDSKLSFEEFWE   71 (89)
T ss_pred             HHHHHHHHHHHhCC--CCCCeECHHHHHHHHHHHh-------hh--hccCHH----HHHHHHHHhCCCCCCCCcHHHHHH
Confidence            56788899888753  4567899999777776522       21  122111    246778999999999999999977


Q ss_pred             HHHHhc
Q psy4949          85 ALATMC   90 (275)
Q Consensus        85 aLs~Lc   90 (275)
                      .+.-|+
T Consensus        72 l~~~l~   77 (89)
T cd05022          72 LIGELA   77 (89)
T ss_pred             HHHHHH
Confidence            766554

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=96.67  E-value=0.0019  Score=39.37  Aligned_cols=26  Identities=23%  Similarity=0.431  Sum_probs=23.3

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ++++|+.| .|+||.|+.+||..+++.
T Consensus         2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~   28 (29)
T PF00036_consen    2 LKEAFREFDKDGDGKIDFEEFKEMMKK   28 (29)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence            57899999 799999999999988875

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=96.62  E-value=0.014  Score=44.98  Aligned_cols=74  Identities=12%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCC-CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQS-DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~-~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      |..++++|+..--.-  .+. .|+..+|..++.........     ...+.+ .    ++-+++.+|.|++|.|++.||.
T Consensus         9 ~~~~~~~F~~~dd~d--gdg~~Is~~EL~~ll~~~~~~~~~-----~~~~~~-~----v~~i~~elD~n~dG~Idf~EF~   76 (93)
T cd05026           9 MDTLIRIFHNYSGKE--GDRYKLSKGELKELLQRELTDFLS-----SQKDPM-L----VDKIMNDLDSNKDNEVDFNEFV   76 (93)
T ss_pred             HHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHhHHhcc-----cccCHH-H----HHHHHHHhCCCCCCCCCHHHHH
Confidence            556778887766321  244 49999977777663322111     122222 2    4567788999999999999998


Q ss_pred             HHHHHhc
Q psy4949          84 VALATMC   90 (275)
Q Consensus        84 ~aLs~Lc   90 (275)
                      ..+..|+
T Consensus        77 ~l~~~l~   83 (93)
T cd05026          77 VLVAALT   83 (93)
T ss_pred             HHHHHHH
Confidence            8776654

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=96.58  E-value=0.016  Score=44.46  Aligned_cols=73  Identities=16%  Similarity=0.276  Sum_probs=49.2

Q ss_pred             HHHHHHHHHH-cCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRE-NGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~-~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      |.+++.+|+. .+-..  ....|+..|+..++..-+..+.+.     .++..+.     .-+++.+|.|++|.|+|.||.
T Consensus         8 i~~l~~~F~~y~~~dg--~~~~Ls~~Elk~ll~~e~~~~~~~-----~~~~~~~-----~~ll~~~D~d~DG~I~f~EF~   75 (89)
T cd05023           8 IESLIAVFQKYAGKDG--DSYQLSKTEFLSFMNTELASFTKN-----QKDPGVL-----DRMMKKLDLNSDGQLDFQEFL   75 (89)
T ss_pred             HHHHHHHHHHHhccCC--CcCeECHHHHHHHHHHhhhHhhcC-----CCCHHHH-----HHHHHHcCCCCCCcCcHHHHH
Confidence            5567888887 54332  123799999887777766555431     2333333     447789999999999999997


Q ss_pred             HHHHHh
Q psy4949          84 VALATM   89 (275)
Q Consensus        84 ~aLs~L   89 (275)
                      ..+.-|
T Consensus        76 ~l~~~l   81 (89)
T cd05023          76 NLIGGL   81 (89)
T ss_pred             HHHHHH
Confidence            655443

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=96.56  E-value=0.0026  Score=38.90  Aligned_cols=26  Identities=23%  Similarity=0.337  Sum_probs=23.9

Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +++.+|+.| .|+||.|+.+||..+|+
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            578999999 79999999999999887

...

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=96.52  E-value=0.005  Score=43.22  Aligned_cols=54  Identities=20%  Similarity=0.294  Sum_probs=40.0

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      |+.+|+.+ .|++|.|+..++..+++..       |      .+++.++.+|..     +|.|+.+||+.++.
T Consensus         1 ~~~~F~~~D~~~~G~i~~~el~~~l~~~-------g------~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~   60 (67)
T cd00052           1 YDQIFRSLDPDGDGLISGDEARPFLGKS-------G------LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH   60 (67)
T ss_pred             ChHHHHHhCCCCCCcCcHHHHHHHHHHc-------C------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            46789998 6889999999998887642       1      134445555543     68999999999774

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>PF14658 EF-hand_9: EF-hand domain

Probab=96.52  E-value=0.0099  Score=43.30  Aligned_cols=59  Identities=17%  Similarity=0.267  Sum_probs=51.4

Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhhc-cCC-CceeHHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQLC-DCN-GHLVAWKFNEYLQD  123 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly~-D~n-G~i~~~el~~~L~~  123 (275)
                      .|.+||++++|+|.+..++.-|-.+-. +..+..|.-+-+.+. ++. |.|+.+.|..+++.
T Consensus         3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            589999999999999999999998887 899999999999883 444 88999999877764

>KOG0044|consensus

Probab=96.52  E-value=0.011  Score=51.77  Aligned_cols=62  Identities=23%  Similarity=0.338  Sum_probs=47.6

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHH---HHHHhcCC--------ChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKV---ALATMCSG--------KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~---aLs~Lc~G--------~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      -++|.|+.||.|++|.|+-.|+.-   ++..+.+.        ++++.-..+|+.. .|++|.+|.++|....+
T Consensus       101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~  174 (193)
T KOG0044|consen  101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK  174 (193)
T ss_pred             HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence            467999999999999999887643   33334332        3666668899999 79999999999865443

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=96.43  E-value=0.0058  Score=46.89  Aligned_cols=64  Identities=16%  Similarity=0.320  Sum_probs=45.5

Q ss_pred             hhHHHHhchhhc--cC-CCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DC-NGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~-nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .+.++.+|+.|+  |+ +|.|+..+|..+|+..  ++..+|.    ..+++.++.+|..     +|.|+.+||+..+.
T Consensus         7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~--~g~~lg~----~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~   78 (94)
T cd05031           7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKE--LSEFLKN----QKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA   78 (94)
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHH--hHHHhhc----cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            456889999994  66 6999999999988752  1322332    2245566666643     68999999998764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=96.41  E-value=0.029  Score=42.70  Aligned_cols=75  Identities=11%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.++++.|++.--+-. ....|+..+|..++...+-...    + ...+ +.    -++-+|+.+|.+++|.|++.+|..
T Consensus         7 i~~~~~~f~~y~~~~~-~~~~Is~~El~~ll~~~~g~~~----t-~~~~-~~----~v~~i~~~~D~d~dG~I~f~eF~~   75 (88)
T cd05030           7 IETIINVFHQYSVRKG-HPDTLYKKEFKQLVEKELPNFL----K-KEKN-QK----AIDKIFEDLDTNQDGQLSFEEFLV   75 (88)
T ss_pred             HHHHHHHHHHHhccCC-CcccCCHHHHHHHHHHHhhHhh----c-cCCC-HH----HHHHHHHHcCCCCCCcCcHHHHHH
Confidence            5667888877664432 3567999997777765432211    1 1112 22    246788999999999999999998


Q ss_pred             HHHHhc
Q psy4949          85 ALATMC   90 (275)
Q Consensus        85 aLs~Lc   90 (275)
                      .+..+.
T Consensus        76 ~~~~~~   81 (88)
T cd05030          76 LVIKVG   81 (88)
T ss_pred             HHHHHH
Confidence            877553

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=96.35  E-value=0.0076  Score=40.30  Aligned_cols=56  Identities=21%  Similarity=0.385  Sum_probs=40.1

Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      +++.+|+.| .|++|.|+.+++..+++..       +    ...+++.+...|..     ++.|+.++|+.++
T Consensus         1 ~~~~~f~~~d~~~~g~l~~~e~~~~l~~~-------~----~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           1 ELREAFRLFDKDGDGTISADELKAALKSL-------G----EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             CHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------C----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            367889999 6889999999998888753       1    11234444444443     5799999999865

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=96.12  E-value=0.024  Score=43.18  Aligned_cols=69  Identities=19%  Similarity=0.184  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHhhcCC--CCCeeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYSVE--SLGRIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD~~--~~G~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.++.-+. .+|+-|+..  .+|.|+..|++..|...-+     +..++.+..+|+.+ .|++|.|+-++|..++..+
T Consensus         4 e~~i~~~~-~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~   80 (88)
T cd05030           4 EKAIETII-NVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV   80 (88)
T ss_pred             HHHHHHHH-HHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            44544444 788999966  4899999999999963322     23367789999999 6889999999998887765

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=96.05  E-value=0.052  Score=41.49  Aligned_cols=72  Identities=10%  Similarity=0.201  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHcC-CCCcCCCC-CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           5 IWNVIEAFRENG-LNAIELQS-DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         5 ~~~~~e~f~~~~-l~~~~~~~-~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      |.+++++|+... -+   .+. .|+..+|..+|+.=+..+....|     +.++     ++-+++..|.|++|+|+|.+|
T Consensus         7 ~~~l~~aF~~fD~~d---gdG~~I~~~eL~~ll~~~~~~~lg~~~-----~~~~-----v~~~i~~~D~n~dG~v~f~eF   73 (88)
T cd05027           7 MVALIDVFHQYSGRE---GDKHKLKKSELKELINNELSHFLEEIK-----EQEV-----VDKVMETLDSDGDGECDFQEF   73 (88)
T ss_pred             HHHHHHHHHHhcccC---CCcCEECHHHHHHHHHHHhHHHhcCCC-----CHHH-----HHHHHHHhCCCCCCcCcHHHH
Confidence            456777887764 23   245 59999988888764444433222     2222     345567789999999999999


Q ss_pred             HHHHHHh
Q psy4949          83 KVALATM   89 (275)
Q Consensus        83 ~~aLs~L   89 (275)
                      ...+.-+
T Consensus        74 ~~li~~~   80 (88)
T cd05027          74 MAFVAMV   80 (88)
T ss_pred             HHHHHHH
Confidence            7666544

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>KOG0036|consensus

Probab=96.03  E-value=0.031  Score=53.99  Aligned_cols=62  Identities=16%  Similarity=0.321  Sum_probs=54.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHH-HHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKL-RYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKl-r~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ..-+|.-||.+++|.|++.++.-||..|...++..++ +-+|+-. +|.+|.++-++|..++.+
T Consensus        16 ~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~   79 (463)
T KOG0036|consen   16 IRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN   79 (463)
T ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH
Confidence            3468999999999999999999999999999777777 5678877 799999999999998864

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=95.91  E-value=0.062  Score=40.89  Aligned_cols=72  Identities=11%  Similarity=0.190  Sum_probs=43.7

Q ss_pred             HHHHHHHHHcC-CCCcCCCC-CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           6 WNVIEAFRENG-LNAIELQS-DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         6 ~~~~e~f~~~~-l~~~~~~~-~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .+++++|.... -+   .+. .|+..++..+|+.-.-......|     +.++     ++-+++.+|.+++|.|++.+|+
T Consensus         9 ~~l~~~F~~fDd~d---g~G~~Is~~El~~~l~~~lg~~~~~~~-----s~~~-----v~~i~~~~D~d~~G~I~f~eF~   75 (92)
T cd05025           9 ETLINVFHAHSGKE---GDKYKLSKKELKDLLQTELSDFLDAQK-----DADA-----VDKIMKELDENGDGEVDFQEFV   75 (92)
T ss_pred             HHHHHHHHHHhccc---CCCCeECHHHHHHHHHHHHHHHccCCC-----CHHH-----HHHHHHHHCCCCCCcCcHHHHH
Confidence            45566776653 33   244 49999977776542211111112     2222     4567788999999999999997


Q ss_pred             HHHHHhc
Q psy4949          84 VALATMC   90 (275)
Q Consensus        84 ~aLs~Lc   90 (275)
                      ..+..++
T Consensus        76 ~l~~~~~   82 (92)
T cd05025          76 VLVAALT   82 (92)
T ss_pred             HHHHHHH
Confidence            7665543

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=95.90  E-value=0.056  Score=41.30  Aligned_cols=69  Identities=9%  Similarity=0.061  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.++|++|+..--+.. +...|+.++|..+++..+. +      +..++.++.     .-+++..|.|++|+|++.+|..
T Consensus         9 ~~~~i~~F~~y~~~~~-~~g~Is~~EL~~~l~~~~~-l------g~k~t~~ev-----~~m~~~~D~d~dG~Idf~EFv~   75 (88)
T cd05029           9 IGLLVAIFHKYSGREG-DKNTLSKKELKELIQKELT-I------GSKLQDAEI-----AKLMEDLDRNKDQEVNFQEYVT   75 (88)
T ss_pred             HHHHHHHHHHHHccCC-CCCEECHHHHHHHHHHHHh-c------CCCCCHHHH-----HHHHHHhcCCCCCCCcHHHHHH
Confidence            5667888876655322 4568999997777765221 1      112333333     4567888999999999999954


Q ss_pred             HH
Q psy4949          85 AL   86 (275)
Q Consensus        85 aL   86 (275)
                      -+
T Consensus        76 lm   77 (88)
T cd05029          76 FL   77 (88)
T ss_pred             HH
Confidence            43

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>smart00027 EH Eps15 homology domain

Probab=95.88  E-value=0.024  Score=43.57  Aligned_cols=58  Identities=21%  Similarity=0.293  Sum_probs=43.7

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .++++-+|..+ .|++|.|+.+++..+++.. .            .+++.++.+|..     ++.|+.+||+..+..
T Consensus         9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~-~------------~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027        9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS-G------------LPQTLLAKIWNLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc-C------------CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            45789999999 5899999999999888751 1            134455555543     689999999987743

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=95.85  E-value=0.071  Score=40.84  Aligned_cols=70  Identities=11%  Similarity=0.097  Sum_probs=51.9

Q ss_pred             hHHHHHHHHHHHHHh-hcCCCCC-eeehHHHHHHHHHhc----CCCh-hhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSA-YSVESLG-RIRVFSIKVALATMC----SGKL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~-fD~~~~G-~I~~~ef~~aLs~Lc----~G~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .+.++..+. -+|.. +|.+++| +|+..||+..+.--.    +... ..-+.-+++.+ .|+||.|+-+||..++..+
T Consensus         4 le~~i~~l~-~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023           4 TERCIESLI-AVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHH-HHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            455555554 46666 7788876 999999999998764    2222 34567788888 7999999999998887765

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=95.83  E-value=0.016  Score=33.94  Aligned_cols=21  Identities=10%  Similarity=0.166  Sum_probs=16.8

Q ss_pred             HHHHhhcCCCCCeeehHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      -+|+.+|.|+||+|++.||..
T Consensus         3 ~~F~~~D~d~DG~is~~E~~~   23 (25)
T PF13202_consen    3 DAFQQFDTDGDGKISFEEFQR   23 (25)
T ss_dssp             HHHHHHTTTSSSEEEHHHHHH
T ss_pred             HHHHHHcCCCCCcCCHHHHHH
Confidence            367888888888888888876

...

>KOG2562|consensus

Probab=95.56  E-value=0.039  Score=53.98  Aligned_cols=88  Identities=19%  Similarity=0.207  Sum_probs=69.5

Q ss_pred             CCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhcc-CCCCCCCchHHHhhhh
Q psy4949          71 VESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVL-ESPSFSYTDTLAQEIF  148 (275)
Q Consensus        71 ~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~g-E~~~f~~~e~~v~~cF  148 (275)
                      ...+|+|++.+|+-.+..+-.-+-..-+.|.|+.+ .|++|.++..+|..+-.++++-...++ |...|   |....++|
T Consensus       326 ~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~f---ed~l~qi~  402 (493)
T KOG2562|consen  326 VKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPF---EDALCQIR  402 (493)
T ss_pred             eeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccH---HHHHHHHH
Confidence            45799999999999888888888888899999999 799999999999999998887654333 33333   55666666


Q ss_pred             cC-----CCcccHHHHHH
Q psy4949         149 SG-----NGKVTVNDFMD  161 (275)
Q Consensus       149 ~~-----d~~Is~~eFl~  161 (275)
                      .-     .++||+.+|+.
T Consensus       403 DMvkP~~~~kItLqDlk~  420 (493)
T KOG2562|consen  403 DMVKPEDENKITLQDLKG  420 (493)
T ss_pred             HHhCccCCCceeHHHHhh
Confidence            53     46888888776

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines

Probab=95.38  E-value=0.009  Score=36.48  Aligned_cols=27  Identities=48%  Similarity=1.346  Sum_probs=12.9

Q ss_pred             ccCcCCCCcccc-ceeeeccCCCCccchhh
Q psy4949         192 ACDACGRANFVG-FRYRCAKCGNFQMCQEC  220 (275)
Q Consensus       192 ~Cd~C~~~pI~G-~RykC~~C~~~dLC~~C  220 (275)
                      .|+.|+. ++.| .-|.|..| ||+|...|
T Consensus         2 ~C~~C~~-~~~~~~~Y~C~~C-df~lH~~C   29 (30)
T PF07649_consen    2 RCDACGK-PIDGGWFYRCSEC-DFDLHEEC   29 (30)
T ss_dssp             --TTTS-----S--EEE-TTT------HHH
T ss_pred             cCCcCCC-cCCCCceEECccC-CCccChhc
Confidence            6999997 8887 99999998 89998887

The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.

>KOG2643|consensus

Probab=95.28  E-value=0.038  Score=53.70  Aligned_cols=52  Identities=21%  Similarity=0.253  Sum_probs=44.3

Q ss_pred             hcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          69 YSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        69 fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ||-+.+|-|++.+|+--+.+|+.  ++.-.+-+|+++ .|+||.|+++||...-+
T Consensus       208 ~~lg~~GLIsfSdYiFLlTlLS~--p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~  260 (489)
T KOG2643|consen  208 YKLGESGLISFSDYIFLLTLLSI--PERNFRIAFKMFDLDGNGEIDKEEFETVQQ  260 (489)
T ss_pred             EEcCCCCeeeHHHHHHHHHHHcc--CcccceeeeeeeecCCCCcccHHHHHHHHH
Confidence            66778999999999999988874  556688999999 79999999999976544

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=95.21  E-value=0.026  Score=38.34  Aligned_cols=26  Identities=12%  Similarity=0.221  Sum_probs=23.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      ++.||+.||.+++|.|++.||+..+.
T Consensus        27 ~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen   27 VDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             HHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            47899999999999999999998875

...

>KOG0031|consensus

Probab=95.11  E-value=1  Score=38.25  Aligned_cols=113  Identities=13%  Similarity=0.186  Sum_probs=82.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHH-hcCCChhhHHHH
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALAT-MCSGKLMDKLRY  100 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~-Lc~G~l~dKlr~  100 (275)
                      .+.-|+..+    |+++|-.+.|. ++      ++..+-+.        ....|.|.|-.|...+.- |++-.+++=..-
T Consensus        45 rDG~IdkeD----L~d~~aSlGk~-~~------d~elDaM~--------~Ea~gPINft~FLTmfGekL~gtdpe~~I~~  105 (171)
T KOG0031|consen   45 RDGFIDKED----LRDMLASLGKI-AS------DEELDAMM--------KEAPGPINFTVFLTMFGEKLNGTDPEEVILN  105 (171)
T ss_pred             CCCcccHHH----HHHHHHHcCCC-CC------HHHHHHHH--------HhCCCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence            477899999    77777776654 22      33322222        357999999999998865 556689999999


Q ss_pred             hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         101 IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       101 ~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +|+.+ .++.|.|..+.|..+|...       |+    ..+++.|+..|..     .|.+....|...+.
T Consensus       106 AF~~FD~~~~G~I~~d~lre~Ltt~-------gD----r~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it  164 (171)
T KOG0031|consen  106 AFKTFDDEGSGKIDEDYLRELLTTM-------GD----RFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT  164 (171)
T ss_pred             HHHhcCccCCCccCHHHHHHHHHHh-------cc----cCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence            99999 4667999999999888752       32    1246677777765     47888888888665

>KOG0028|consensus

Probab=94.87  E-value=0.21  Score=42.54  Aligned_cols=93  Identities=18%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh----ccCCCceeHHHHHHHHHHHHhchhhccCCCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL----CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS  138 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly----~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~  138 (275)
                      .=-|..||++++|+|++.|+++|+-.+-=..-.   .-+-+++    .++.|.|+-.+|...++..      ++|..   
T Consensus        36 ~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k---~ei~kll~d~dk~~~g~i~fe~f~~~mt~k------~~e~d---  103 (172)
T KOG0028|consen   36 KEAFELFDPDMAGKIDVEELKVAMRALGFEPKK---EEILKLLADVDKEGSGKITFEDFRRVMTVK------LGERD---  103 (172)
T ss_pred             HHHHHhhccCCCCcccHHHHHHHHHHcCCCcch---HHHHHHHHhhhhccCceechHHHHHHHHHH------HhccC---
Confidence            356788999999999999999987655422112   2223344    3567999999987766643      34432   


Q ss_pred             CchHHHhhhhc---C--CCcccHHHHHHHHhcCCCC
Q psy4949         139 YTDTLAQEIFS---G--NGKVTVNDFMDTMMSEPGP  169 (275)
Q Consensus       139 ~~e~~v~~cF~---~--d~~Is~~eFl~~~~~d~~P  169 (275)
                       +...+..-|.   .  +|+||..+|..-+. +..|
T Consensus       104 -t~eEi~~afrl~D~D~~Gkis~~~lkrvak-eLge  137 (172)
T KOG0028|consen  104 -TKEEIKKAFRLFDDDKTGKISQRNLKRVAK-ELGE  137 (172)
T ss_pred             -cHHHHHHHHHcccccCCCCcCHHHHHHHHH-HhCc
Confidence             3334444455   2  58999999888554 4455

>KOG4223|consensus

Probab=94.79  E-value=0.17  Score=47.41  Aligned_cols=92  Identities=20%  Similarity=0.280  Sum_probs=63.7

Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhc----------CCChhhHH----HHhchhh-ccCCCceeHHHHHHHHHHHHhchh
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMC----------SGKLMDKL----RYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPA  129 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc----------~G~l~dKl----r~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~  129 (275)
                      -+..||.|.+|.|++.++.....-.-          .+.-..|+    +.-|+.- .|+||.+|++||..+|+     |.
T Consensus       118 ~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLH-----PE  192 (325)
T KOG4223|consen  118 RWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLH-----PE  192 (325)
T ss_pred             HHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccC-----hh
Confidence            46789999999999999999887421          11112222    4578877 69999999999999987     32


Q ss_pred             hccCCCCCCCc-----hHHHhhhhc-CCCcccHHHHHHHHhcCC
Q psy4949         130 AVLESPSFSYT-----DTLAQEIFS-GNGKVTVNDFMDTMMSEP  167 (275)
Q Consensus       130 ~~gE~~~f~~~-----e~~v~~cF~-~d~~Is~~eFl~~~~~d~  167 (275)
                         |   ++..     .+.++.+=. +||.|+++||+--+.+..
T Consensus       193 ---e---~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~  230 (325)
T KOG4223|consen  193 ---E---HPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHE  230 (325)
T ss_pred             ---h---cchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence               1   2221     233333322 379999999999887654

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=94.74  E-value=0.037  Score=32.37  Aligned_cols=24  Identities=25%  Similarity=0.458  Sum_probs=20.2

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                      ++.+|+.+ .|+||.|+..||..++
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence            45689999 7999999999998754

...

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=94.62  E-value=0.071  Score=39.70  Aligned_cols=61  Identities=23%  Similarity=0.415  Sum_probs=44.5

Q ss_pred             HHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---------CCcccHHHHHHHHhcCC
Q psy4949          98 LRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---------NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus        98 lr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---------d~~Is~~eFl~~~~~d~  167 (275)
                      ++.+|+-|+++.+.||.++|..+|++...-+..         +...+..++.+         .+.+|++.|..+++++.
T Consensus         2 i~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~---------~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~   71 (83)
T PF09279_consen    2 IEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRL---------TDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE   71 (83)
T ss_dssp             HHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTS---------SHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred             HHHHHHHHhCCCCcCCHHHHHHHHHHHhccccC---------cHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence            457899998788999999999999975433321         34444444433         58999999999999853

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>smart00054 EFh EF-hand, calcium binding motif

Probab=94.49  E-value=0.064  Score=29.96  Aligned_cols=26  Identities=15%  Similarity=0.164  Sum_probs=20.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALAT   88 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~   88 (275)
                      ..+|..+|.+++|.|++.+|..++..
T Consensus         3 ~~~f~~~d~~~~g~i~~~e~~~~~~~   28 (29)
T smart00054        3 KEAFRLFDKDGDGKIDFEEFKDLLKA   28 (29)
T ss_pred             HHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            45788889988899999888887753

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG0377|consensus

Probab=94.24  E-value=0.11  Score=50.80  Aligned_cols=63  Identities=16%  Similarity=0.357  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTL  143 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~  143 (275)
                      -+||+.|.|.+|.|++.||..|.-+++               +--||.|+..++.++-                      
T Consensus       551 tiF~~iD~D~SG~isldEF~~a~~l~~---------------sh~~~~i~~~~i~~la----------------------  593 (631)
T KOG0377|consen  551 TIFNIIDADNSGEISLDEFRTAWKLLS---------------SHMNGAISDDEILELA----------------------  593 (631)
T ss_pred             HHHHHhccCCCCceeHHHHHHHHHHHH---------------hhcCCCcCHHHHHHHH----------------------
Confidence            466667777777777766666554322               1225556666543222                      


Q ss_pred             Hhhh-hcCCCcccHHHHHHHHh
Q psy4949         144 AQEI-FSGNGKVTVNDFMDTMM  164 (275)
Q Consensus       144 v~~c-F~~d~~Is~~eFl~~~~  164 (275)
                       +++ |.+||.|.++||++.+.
T Consensus       594 -~~mD~NkDG~IDlNEfLeAFr  614 (631)
T KOG0377|consen  594 -RSMDLNKDGKIDLNEFLEAFR  614 (631)
T ss_pred             -HhhccCCCCcccHHHHHHHHh
Confidence             222 78899999999999885

>KOG0041|consensus

Probab=94.12  E-value=0.15  Score=45.02  Aligned_cols=63  Identities=14%  Similarity=0.238  Sum_probs=47.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.-+|+.||.++||.||+.|+|-.+--|-...-.=-++-+-+-. -|.+|.||..++..|.+-+
T Consensus       101 ~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrka  164 (244)
T KOG0041|consen  101 AESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA  164 (244)
T ss_pred             HHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence            34589999999999999999999877664443333334454444 3889999999999888765

>KOG0751|consensus

Probab=93.95  E-value=0.58  Score=46.49  Aligned_cols=59  Identities=14%  Similarity=0.114  Sum_probs=51.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .++-++=|..+||-|++.||.+-=++||.-  +-++.-+|+++ ..++|.+|-+++..+...
T Consensus        77 ~Lla~iaD~tKDglisf~eF~afe~~lC~p--Dal~~~aFqlFDr~~~~~vs~~~~~~if~~  136 (694)
T KOG0751|consen   77 RLLASIADQTKDGLISFQEFRAFESVLCAP--DALFEVAFQLFDRLGNGEVSFEDVADIFGQ  136 (694)
T ss_pred             HHHHhhhhhcccccccHHHHHHHHhhccCc--hHHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence            346678899999999999999999999975  77899999999 477999999999887764

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=93.72  E-value=0.14  Score=39.58  Aligned_cols=59  Identities=12%  Similarity=0.227  Sum_probs=45.2

Q ss_pred             HHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          99 RYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        99 r~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      --+|.-|+..+|.++|.||..+|+.  .+|..+..    ...+..++.+|..     |++|+..||+.-+
T Consensus        11 I~~FhkYaG~~~tLsk~Elk~Ll~~--Elp~~l~~----~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv   74 (91)
T cd05024          11 MLTFHKFAGEKNYLNRDDLQKLMEK--EFSEFLKN----QNDPMAVDKIMKDLDDCRDGKVGFQSFFSLI   74 (91)
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHH--HhHHHHcC----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3478889866789999999999974  56655553    1246788888875     7999999998854

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0030|consensus

Probab=92.99  E-value=0.68  Score=38.69  Aligned_cols=102  Identities=23%  Similarity=0.247  Sum_probs=65.4

Q ss_pred             hHHHHHHHHHHcCCCCcCC----------CCCCCHHHHH-HHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCC
Q psy4949           4 DIWNVIEAFRENGLNAIEL----------QSDVSVARFE-TLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVE   72 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~----------~~~l~~~~l~-~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~   72 (275)
                      +..-+=+.+|..|+|+-+.          ...++++++. ...--||+++.|.-   .+...+.++     --+++||++
T Consensus        29 ~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk---~q~t~edfv-----egLrvFDke  100 (152)
T KOG0030|consen   29 SGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK---DQGTYEDFV-----EGLRVFDKE  100 (152)
T ss_pred             cHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc---ccCcHHHHH-----HHHHhhccc
Confidence            4455566778888876531          1233444431 12335777776651   244555443     246999999


Q ss_pred             CCCeeehHHHHHHHHHhcCCChhhHH--HHhchhhc---cCCCceeHHHHH
Q psy4949          73 SLGRIRVFSIKVALATMCSGKLMDKL--RYIFSQLC---DCNGHLVAWKFN  118 (275)
Q Consensus        73 ~~G~I~~~ef~~aLs~Lc~G~l~dKl--r~~F~ly~---D~nG~i~~~el~  118 (275)
                      ++|.|.--++.-.|..|     .+|+  .-+-.|++   |+||+|.-+.|-
T Consensus       101 g~G~i~~aeLRhvLttl-----Gekl~eeEVe~Llag~eD~nG~i~YE~fV  146 (152)
T KOG0030|consen  101 GNGTIMGAELRHVLTTL-----GEKLTEEEVEELLAGQEDSNGCINYEAFV  146 (152)
T ss_pred             CCcceeHHHHHHHHHHH-----HhhccHHHHHHHHccccccCCcCcHHHHH
Confidence            99999999999999854     4555  23555653   999999988763

>KOG0031|consensus

Probab=92.62  E-value=0.49  Score=40.22  Aligned_cols=89  Identities=12%  Similarity=0.102  Sum_probs=63.4

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTL  143 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~  143 (275)
                      -.|+..|.|+||.|+=..++..|+.|-+--.++-+..+++   -.+|.|.---|.   +       +.||...-..+|+.
T Consensus        36 EAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~---Ea~gPINft~FL---T-------mfGekL~gtdpe~~  102 (171)
T KOG0031|consen   36 EAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMK---EAPGPINFTVFL---T-------MFGEKLNGTDPEEV  102 (171)
T ss_pred             HHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHH---hCCCCeeHHHHH---H-------HHHHHhcCCCHHHH
Confidence            4689999999999999999999998877755665565555   457777755443   2       34554433445665


Q ss_pred             Hh---hhhcC--CCcccHHHHHHHHhc
Q psy4949         144 AQ---EIFSG--NGKVTVNDFMDTMMS  165 (275)
Q Consensus       144 v~---~cF~~--d~~Is~~eFl~~~~~  165 (275)
                      +.   +||..  .|.|..+.+.+|++.
T Consensus       103 I~~AF~~FD~~~~G~I~~d~lre~Ltt  129 (171)
T KOG0031|consen  103 ILNAFKTFDDEGSGKIDEDYLRELLTT  129 (171)
T ss_pred             HHHHHHhcCccCCCccCHHHHHHHHHH
Confidence            54   45665  489999999999986

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines

Probab=92.58  E-value=0.086  Score=32.18  Aligned_cols=27  Identities=41%  Similarity=1.083  Sum_probs=23.3

Q ss_pred             ccCcCCCCccccc-eeeeccCCCCccchhh
Q psy4949         192 ACDACGRANFVGF-RYRCAKCGNFQMCQEC  220 (275)
Q Consensus       192 ~Cd~C~~~pI~G~-RykC~~C~~~dLC~~C  220 (275)
                      .|++|.. .+.|. .|+|..|. |++-..|
T Consensus         2 ~C~~C~~-~~~~~~~Y~C~~c~-f~lh~~C   29 (30)
T PF03107_consen    2 WCDVCRR-KIDGFYFYHCSECC-FTLHVRC   29 (30)
T ss_pred             CCCCCCC-CcCCCEeEEeCCCC-CeEcCcc
Confidence            6999987 89999 99999987 8877666

The pattern of conservation is similar to that found in DAG_PE-bind (IPR002219 from INTERPRO), therefore we have termed this domain DC1 for divergent C1 domain. This domain probably also binds to two zinc ions. The function of proteins with this domain is uncertain, however this domain may bind to molecules such as diacylglycerol. This family are found in plant proteins.

>KOG0038|consensus

Probab=92.08  E-value=0.69  Score=39.08  Aligned_cols=62  Identities=16%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             HHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHH-HH-hchhh----ccCCCceeHHHHHHHH
Q psy4949          60 LLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKL-RY-IFSQL----CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        60 l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKl-r~-~F~ly----~D~nG~i~~~el~~~L  121 (275)
                      +=+++.|++||-|+++.|---.+...|..|.++.|.+-- .. .=+.+    .||+|.++-.+++.++
T Consensus       108 lK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i  175 (189)
T KOG0038|consen  108 LKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVI  175 (189)
T ss_pred             hhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence            346788999999999999999999999999999776543 22 22233    3889999999987654

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=91.98  E-value=0.23  Score=39.80  Aligned_cols=57  Identities=11%  Similarity=0.125  Sum_probs=39.8

Q ss_pred             HHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHH
Q psy4949          60 LLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFN  118 (275)
Q Consensus        60 l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~  118 (275)
                      -.+.|.|.-.|.|+||.++-.|++.....|  -+++.=.+..|+-. .|+||.||..|..
T Consensus        54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~  111 (113)
T PF10591_consen   54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWC  111 (113)
T ss_dssp             HHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred             hhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence            357899999999999999999998877766  34444456666655 5889999999863

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=91.20  E-value=0.6  Score=36.91  Aligned_cols=59  Identities=20%  Similarity=0.154  Sum_probs=43.3

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      -+|+..|+ ++|.|+-...+-.|  .-.|=..+-|.-++.+- .|++|.+++.||.-.++-|.
T Consensus        14 ~~F~~l~~-~~g~isg~~a~~~f--~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~   73 (104)
T PF12763_consen   14 QIFQSLDP-QDGKISGDQAREFF--MKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLIN   73 (104)
T ss_dssp             HHHHCTSS-STTEEEHHHHHHHH--HHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHH
T ss_pred             HHHHhcCC-CCCeEeHHHHHHHH--HHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHH
Confidence            46677775 57888888877533  34566668889999888 58889999999877666443

...

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=91.05  E-value=0.53  Score=45.70  Aligned_cols=41  Identities=15%  Similarity=0.177  Sum_probs=34.2

Q ss_pred             CCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcC
Q psy4949          49 SQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCS   91 (275)
Q Consensus        49 ~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~   91 (275)
                      .|.|+.++...  .+.+|..+|.|+||+|++.||+.++....+
T Consensus       348 dG~Is~~E~~~--~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~  388 (391)
T PRK12309        348 DGFITREEWLG--SDAVFDALDLNHDGKITPEEMRAGLGAALR  388 (391)
T ss_pred             CCcCcHHHHHH--HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence            36788877643  578999999999999999999999987643

>KOG2643|consensus

Probab=90.96  E-value=0.52  Score=46.07  Aligned_cols=58  Identities=16%  Similarity=0.279  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhH-------------------HHHhchhhccCCCceeHHHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMC-SGKLMDK-------------------LRYIFSQLCDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dK-------------------lr~~F~ly~D~nG~i~~~el~~~L~~i  124 (275)
                      .|..||.|+||-|+-.||.....++. .+++...                   .-|.|.  .|+||.++-+||..+.+.+
T Consensus       238 AFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG--~rg~~kLs~deF~~F~e~L  315 (489)
T KOG2643|consen  238 AFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFG--KRGNGKLSIDEFLKFQENL  315 (489)
T ss_pred             eeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhc--cCCCccccHHHHHHHHHHH
Confidence            58899999999999999998886554 3333331                   123333  4899999999998888754

>KOG0030|consensus

Probab=90.26  E-value=5.1  Score=33.59  Aligned_cols=116  Identities=16%  Similarity=0.232  Sum_probs=74.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCC--CCCeeehHHHHHHHHHhcCC----Chhh
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVE--SLGRIRVFSIKVALATMCSG----KLMD   96 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~--~~G~I~~~ef~~aLs~Lc~G----~l~d   96 (275)
                      +.-|+..++-.+|+.+=.     -|+      +.-    +.-.+.-++++  ..-+|+|..|+-.+..+..-    +.+|
T Consensus        25 D~ki~~~q~gdvlRalG~-----nPT------~ae----V~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~ed   89 (152)
T KOG0030|consen   25 DGKISGSQVGDVLRALGQ-----NPT------NAE----VLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYED   89 (152)
T ss_pred             cccccHHHHHHHHHHhcC-----CCc------HHH----HHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHH
Confidence            455777776555554421     143      111    12344556655  44799999999999999864    3333


Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC----CCcccHHHHHHHHhc
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~----d~~Is~~eFl~~~~~  165 (275)
                      =++ -.+.+ .++||.|.-.||+.+|..       +||-.    +++.|+..-.+    +|.|..++|+..+++
T Consensus        90 fve-gLrvFDkeg~G~i~~aeLRhvLtt-------lGekl----~eeEVe~Llag~eD~nG~i~YE~fVk~i~~  151 (152)
T KOG0030|consen   90 FVE-GLRVFDKEGNGTIMGAELRHVLTT-------LGEKL----TEEEVEELLAGQEDSNGCINYEAFVKHIMS  151 (152)
T ss_pred             HHH-HHHhhcccCCcceeHHHHHHHHHH-------HHhhc----cHHHHHHHHccccccCCcCcHHHHHHHHhc
Confidence            222 23334 588999999999988874       46643    35666666665    589999999988764

>smart00054 EFh EF-hand, calcium binding motif

Probab=89.37  E-value=0.41  Score=26.43  Aligned_cols=26  Identities=23%  Similarity=0.385  Sum_probs=21.8

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ++.+|+.+ .|++|.|+..++..+++.
T Consensus         2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~   28 (29)
T smart00054        2 LKEAFRLFDKDGDGKIDFEEFKDLLKA   28 (29)
T ss_pred             HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            56789998 688899999999888764

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG2562|consensus

Probab=87.36  E-value=5.6  Score=39.31  Aligned_cols=138  Identities=23%  Similarity=0.365  Sum_probs=85.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHH----HHHHhhcCCCCCeeehHHHHH-----HHHHhcCC-
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLN----WLLSAYSVESLGRIRVFSIKV-----ALATMCSG-   92 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~----~lf~~fD~~~~G~I~~~ef~~-----aLs~Lc~G-   92 (275)
                      ...+...+.+..|+++-.    .+|-+.....+++.++|+.    -+|-.-|+.++|+|.+.+++.     +|.-++-. 
T Consensus       188 ~~yl~q~df~~~Lqeli~----Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEe  263 (493)
T KOG2562|consen  188 CSYLRQDDFKPYLQELIA----THPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEE  263 (493)
T ss_pred             ccceeccccHHHHHHHHh----cCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHh
Confidence            445666666666666553    3442233456666666554    467788999999999988755     45555544 


Q ss_pred             ChhhHHHH--------h---chhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---------C
Q psy4949          93 KLMDKLRY--------I---FSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---------N  151 (275)
Q Consensus        93 ~l~dKlr~--------~---F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---------d  151 (275)
                      .+.++.+|        +   |--+ .|+||.|++++|..+=..              ..++..|+++|+.         +
T Consensus       264 d~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~--------------tlt~~ivdRIFs~v~r~~~~~~e  329 (493)
T KOG2562|consen  264 DINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDH--------------TLTERIVDRIFSQVPRGFTVKVE  329 (493)
T ss_pred             hhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhcc--------------chhhHHHHHHHhhccccceeeec
Confidence            34444454        1   1111 388999999998532221              1136789999992         6


Q ss_pred             CcccHHHHHHHHhcCC---CCccc-chhhhh
Q psy4949         152 GKVTVNDFMDTMMSEP---GPACL-IWLPLL  178 (275)
Q Consensus       152 ~~Is~~eFl~~~~~d~---~Pq~l-vWL~~~  178 (275)
                      |.++.++|+..+.+..   +|+++ =|.-++
T Consensus       330 GrmdykdFv~FilA~e~k~t~~SleYwFrcl  360 (493)
T KOG2562|consen  330 GRMDYKDFVDFILAEEDKDTPASLEYWFRCL  360 (493)
T ss_pred             CcccHHHHHHHHHHhccCCCccchhhheeee
Confidence            8999999888776532   45554 354443

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=84.43  E-value=4.1  Score=32.12  Aligned_cols=51  Identities=8%  Similarity=0.266  Sum_probs=38.5

Q ss_pred             HHHHHHHhhcCCCCCccChHHHHHHHH---------HHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          36 SSLYHNLNKRLPVSQQVHVEVLSGLLL---------NWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        36 ~~lY~~~~k~~P~~~~v~~~~~~~l~~---------~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      ..+|..+   .|.++.++.+.+..++.         .-+++.=|.+++|++++.||.+|+-++
T Consensus        13 ~~~F~~l---~~~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li   72 (104)
T PF12763_consen   13 DQIFQSL---DPQDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI   72 (104)
T ss_dssp             HHHHHCT---SSSTTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHhc---CCCCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence            3445443   35567888888877754         358999999999999999999999865

...

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=83.32  E-value=0.23  Score=39.71  Aligned_cols=60  Identities=13%  Similarity=0.267  Sum_probs=34.6

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-CCCcccHHHHHH
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-GNGKVTVNDFMD  161 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-~d~~Is~~eFl~  161 (275)
                      .-..=+.|.|..+ .|+||.+++.|+..|.+.+  +|       .-....+..+.|=. +|+.||+.|+..
T Consensus        51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~-------~e~C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MP-------PEHCARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             GGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--ST-------TGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hh-------hHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence            3444459999999 6999999999986544321  11       00111334445522 379999999764

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG4223|consensus

Probab=81.58  E-value=3.8  Score=38.62  Aligned_cols=113  Identities=12%  Similarity=0.127  Sum_probs=71.8

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      =+..++-..|.+++|.|+..|++.=+.-...-.+.+.-.--|..| .|.+|.|+.+++..-.-.....|... .....+.
T Consensus        78 rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~-~d~e~~~  156 (325)
T KOG4223|consen   78 RLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEF-PDEEDNE  156 (325)
T ss_pred             HHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcccc-ccchhcH
Confidence            345789999999999999999999998777777777777777778 68899999999753332211111100 0000010


Q ss_pred             ch----HHHhhhhcC-----CCcccHHHHHHHHhcCCCCcccch
Q psy4949         140 TD----TLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACLIW  174 (275)
Q Consensus       140 ~e----~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~lvW  174 (275)
                      ..    ..=+.-|..     ||.+|++||...+==+..|+..-|
T Consensus       157 ~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~i  200 (325)
T KOG4223|consen  157 EYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDI  200 (325)
T ss_pred             HHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHH
Confidence            10    122334553     789999999997722224444444

>KOG0377|consensus

Probab=81.10  E-value=4.2  Score=40.16  Aligned_cols=29  Identities=14%  Similarity=0.061  Sum_probs=24.4

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS   91 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~   91 (275)
                      +-+-+..|-|+||.||+.||.-|+-+.=+
T Consensus       590 ~~la~~mD~NkDG~IDlNEfLeAFrlvdr  618 (631)
T KOG0377|consen  590 LELARSMDLNKDGKIDLNEFLEAFRLVDR  618 (631)
T ss_pred             HHHHHhhccCCCCcccHHHHHHHHhhhcc
Confidence            35678999999999999999999876544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	275
1eg3_A	261	Structure Of A Dystrophin Ww Domain Fragment In Com		5e-11
2e5r_A	63	Solution Structure Of The Zz Domain Of Dystrobrevin		5e-11

>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex With A Beta-Dystroglycan Peptide Length = 261

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 67  SAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLA 126
           + Y     GRIRV S K  + ++C   L DK RY+F Q+    G     +    L D + 
Sbjct: 139 NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ 198
Query: 127 IPAAVLESPSF--SYTDTLAQEIFS-GNGKVTVND--FMDTMMSEPGPACLIWLPLLHRL 181
           IP  + E  SF  S  +   +  F   N K  +    F+D M  E  P  ++WLP+LHR+
Sbjct: 199 IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLE--PQSMVWLPVLHRV 256
Query: 182 TAVES 186
            A E+
Sbjct: 257 AAAET 261

>pdb|2E5R|A Chain A, Solution Structure Of The Zz Domain Of Dystrobrevin Alpha (Dystrobrevin-Alpha) Length = 63

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 189 HPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           HP+ C  C   + +GFRYRC +C N+Q+CQ+CFW G   G H+ +H++KE
Sbjct: 10  HPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKE 59

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	275
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	4e-60
2e5r_A	63	Dystrobrevin alpha; ZZ domain, structural genomics	7e-18
2fc7_A	82	ZZZ3 protein; structure genomics, ZZ domain, struc	1e-13
2dip_A	98	Zinc finger SWIM domain-containing protein 2; ZZ d	7e-11
1tot_A	52	CREB-binding protein; zinc binding, CBP, TAZ2, tra	2e-06

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Length = 261

 Score =  190 bits (484), Expect = 4e-60
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 11/191 (5%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
             + +    +A  ++ L   +    + + +    L+++Y  L +       V+V +   +
Sbjct: 77  DLLSLSAACDALDQHNLKQND--QPMDILQIINCLTTIYDRLEQEHN--NLVNVPLCVDM 132

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
            LNWLL+ Y     GRIRV S K  + ++C   L DK RY+F Q+    G     +    
Sbjct: 133 CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLL 192

Query: 121 LQDVLAIPAAVLESPSFSYTD--TLAQEIF---SGNGKVTVNDFMDTMMSEPGPACLIWL 175
           L D + IP  + E  SF  ++     +  F   +   ++    F+D M  E  P  ++WL
Sbjct: 193 LHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLE--PQSMVWL 250

Query: 176 PLLHRLTAVES 186
           P+LHR+ A E+
Sbjct: 251 PVLHRVAAAET 261

>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 63

 Score = 74.9 bits (184), Expect = 7e-18
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 182 TAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
           +      HP+ C  C   + +GFRYRC +C N+Q+CQ+CFW G   G H+ +H++KE
Sbjct: 3   SGSSGVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKE 59

>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6 Length = 82

 Score = 63.9 bits (155), Expect = 1e-13
 Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 182 TAVESTSHP-IACDACGRANFVGFRYRCAKC---GNFQMCQECFWWGRVSGGHNLEHEVK 237
                  H    CD CG     G R+ C  C    +   C  C      +  H  +H+++
Sbjct: 12  AESGFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLE 71

>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6 Length = 98

 Score = 57.0 bits (137), Expect = 7e-11
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 10/65 (15%)

Query: 189 HP-IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHE----VKENHPVN 243
           H  I C+ C +    G  Y+C +C  + +CQECF         +L H      K N    
Sbjct: 29  HLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECF-----DSYCHLSHTFTFREKRNQKWR 83

Query: 244 KLVTR 248
            L  R
Sbjct: 84  SLEKR 88

>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6 Length = 52

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECF 221
           C+ C     V  R+ C  C ++ +C  C+
Sbjct: 9   CNECKH--HVETRWHCTVCEDYDLCINCY 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	275
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	100.0
2e5r_A	63	Dystrobrevin alpha; ZZ domain, structural genomics	99.86
2fc7_A	82	ZZZ3 protein; structure genomics, ZZ domain, struc	99.74
2dip_A	98	Zinc finger SWIM domain-containing protein 2; ZZ d	99.55
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.51
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.45
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.45
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.42
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.41
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.4
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.38
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.35
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.35
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.34
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.33
1tot_A	52	CREB-binding protein; zinc binding, CBP, TAZ2, tra	99.32
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.31
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	99.3
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.29
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.24
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.22
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.2
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.17
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.16
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.15
3fwb_A	161	Cell division control protein 31; gene gating, com	99.15
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.15
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.13
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.11
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.1
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.1
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.09
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.07
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.05
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.05
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.04
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.04
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.04
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.03
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.03
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.02
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.02
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.0
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.0
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.99
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.99
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.98
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.97
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.96
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	98.96
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.96
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.95
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.95
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.95
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.94
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.93
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.93
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.93
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.92
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.92
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.92
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.88
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.87
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	98.86
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.86
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.86
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.86
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.84
1y1x_A	191	Leishmania major homolog of programmed cell death	98.84
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.84
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.84
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.84
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.84
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.84
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.83
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.82
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.82
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.81
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.81
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.8
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.79
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.79
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.78
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.77
1y1x_A	191	Leishmania major homolog of programmed cell death	98.76
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.76
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.75
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.75
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.75
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.73
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	98.73
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.73
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.72
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	98.72
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.72
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.72
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	98.71
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	98.71
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.69
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	98.67
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	98.65
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	98.64
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	98.62
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.6
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	98.59
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.58
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	98.58
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.58
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.58
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	98.57
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.57
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.54
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.53
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	98.51
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.5
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	98.5
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	98.49
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.49
3fwb_A	161	Cell division control protein 31; gene gating, com	98.47
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.47
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	98.46
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.46
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	98.46
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.45
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	98.45
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.44
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.43
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.43
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.42
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.42
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	98.42
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.41
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.4
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	98.39
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	98.39
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.38
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.37
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.37
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.37
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.37
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.37
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	98.37
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	98.37
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	98.36
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.36
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.36
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	98.36
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.35
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.34
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.34
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.33
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.33
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.33
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.33
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.33
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.31
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.3
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	98.29
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.29
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.29
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.28
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.28
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.27
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.27
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	98.26
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.26
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.25
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.25
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.25
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.24
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.24
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.24
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.24
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	98.23
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	98.23
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.22
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	98.21
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.2
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.19
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	98.19
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.18
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.18
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.17
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	98.17
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.17
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.16
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.16
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.15
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	98.14
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.14
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.13
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.13
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	98.12
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.11
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.08
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.07
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	98.07
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.06
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	98.05
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.04
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	98.04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.04
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.03
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	98.03
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.03
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.03
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.03
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.03
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.0
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	97.99
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.97
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	97.96
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	97.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.95
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	97.94
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	97.92
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	97.91
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	97.88
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	97.87
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	97.86
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	97.84
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	97.83
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	97.79
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	97.76
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.74
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	97.73
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	97.72
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	97.7
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	97.67
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	97.66
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	97.64
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	97.63
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	97.58
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	97.58
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	97.56
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	97.56
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	97.55
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	97.54
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	97.52
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	97.52
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	97.52
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	97.51
2jq6_A	139	EH domain-containing protein 1; metal binding prot	97.5
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	97.5
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	97.49
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	97.49
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	97.48
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	97.48
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	97.48
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	97.47
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	97.47
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	97.46
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	97.45
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	97.44
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	97.44
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	97.42
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	97.42
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	97.41
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	97.41
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	97.4
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	97.38
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	97.38
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	97.38
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	97.37
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	97.36
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	97.36
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	97.35
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	97.3
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	97.25
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	97.2
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	97.19
3li6_A	66	Calcium-binding protein; calcium signaling protein	97.19
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	97.17
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	97.17
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	97.11
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	97.1
1c07_A	95	Protein (epidermal growth factor receptor pathway	97.09
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	97.06
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	97.05
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	97.02
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	97.01
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	96.99
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	96.98
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	96.95
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	96.88
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	96.83
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	96.83
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	96.82
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	96.81
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	96.78
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	96.76
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	96.74
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	96.74
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	96.73
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	96.73
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	96.72
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	96.71
2jq6_A	139	EH domain-containing protein 1; metal binding prot	96.66
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	96.56
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	96.51
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	96.49
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	96.41
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	96.33
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	96.31
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	96.3
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	95.94
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	95.85
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	95.14
1nub_A	229	Basement membrane protein BM-40; extracellular mod	94.93
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	94.82
1nub_A	229	Basement membrane protein BM-40; extracellular mod	94.78
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	93.83
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	93.72
1v5n_A	89	PDI-like hypothetical protein AT1G60420; DC1 domai	91.8
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	87.07
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	85.44

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=100.00  E-value=2e-52  Score=378.16  Aligned_cols=180  Identities=28%  Similarity=0.528  Sum_probs=172.1

Q ss_pred             CcchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehH
Q psy4949           1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVF   80 (275)
Q Consensus         1 hlvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~   80 (275)
                      |+||+|+|+|+|++|||++  ++..|+++|++++|++||++++|++|+  +||++.+++++++|||++||+|++|+|+|+
T Consensus        77 ~lv~l~~~~~~f~~~~l~~--~~~~l~~~~l~~~L~~lY~~l~~~~p~--~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~  152 (261)
T 1eg3_A           77 DLLSLSAACDALDQHNLKQ--NDQPMDILQIINCLTTIYDRLEQEHNN--LVNVPLCVDMCLNWLLNVYDTGRTGRIRVL  152 (261)
T ss_dssp             GGCCHHHHHHHHHHTTCCC--TTSEEEHHHHHHHHHHHHHHHHHHSTT--TCCHHHHHHHHHHHHHHHHCTTCCSEEEHH
T ss_pred             ceeeHHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHHHHHHHhhCcC--cCCchhhHHHHHHHHHHHccCCCCceEeHH
Confidence            6899999999999999994  678899999999999999999999997  899999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc--hHHHhhhhcC---CCccc
Q psy4949          81 SIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT--DTLAQEIFSG---NGKVT  155 (275)
Q Consensus        81 ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~--e~~v~~cF~~---d~~Is  155 (275)
                      ||++||++||+|+++|||||+|++|+|+||+|+++||..||+++++||+++||.++|+.+  |++|++||++   |++||
T Consensus       153 ef~~aLs~l~rG~leeKL~w~F~lyDD~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d~dg~It  232 (261)
T 1eg3_A          153 SFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE  232 (261)
T ss_dssp             HHHHHHHHTSSSCHHHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHheeeCCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCCCCCcCC
Confidence            999999999999999999999999999999999999999999999999999999888764  8999999985   68999


Q ss_pred             HHHHHHHHhcCCCCcccchhhhhhcccccCC
Q psy4949         156 VNDFMDTMMSEPGPACLIWLPLLHRLTAVES  186 (275)
Q Consensus       156 ~~eFl~~~~~d~~Pq~lvWL~~~~r~~~~~~  186 (275)
                      ++||++|+++|  |++++|||++||++++|+
T Consensus       233 ~~EFl~~~~~d--p~il~wL~~lhR~~~~E~  261 (261)
T 1eg3_A          233 AALFLDWMRLE--PQSMVWLPVLHRVAAAET  261 (261)
T ss_dssp             HHHHHHHHHTC--CTTTTHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhC--cHHHHHHHHHHHHHhccC
Confidence            99999999987  899999999999999884

>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=3.6e-22  Score=143.28  Aligned_cols=61  Identities=39%  Similarity=1.026  Sum_probs=58.9

Q ss_pred             cccCCCCcCcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCC
Q psy4949         182 TAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV  242 (275)
Q Consensus       182 ~~~~~~~h~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~  242 (275)
                      +++++++|++.||+|++.||.|.||||++|+|||||+.||+.|++++.|+.+|||++|.+|
T Consensus         3 s~~~~v~H~~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~~~~~H~~~H~~~~~~t~   63 (63)
T 2e5r_A            3 SGSSGVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSW   63 (63)
T ss_dssp             CCSSSCCSCSCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCCCCSSSCTTCCEEEECCC
T ss_pred             CCcCCceeCCCCcCCCCcceecceEEecCCCCchhHHHHHhCCCcCCCCCCCCCEEEEeCC
Confidence            5788999999999999999999999999999999999999999999999999999999987

>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6

Probab=99.74  E-value=1.2e-18  Score=131.09  Aligned_cols=64  Identities=20%  Similarity=0.445  Sum_probs=59.3

Q ss_pred             ccCCCCc-CcccCcCCCCccccceeeeccCCC---CccchhhhhCCcccCCCCCCCceeeecCCCChh
Q psy4949         183 AVESTSH-PIACDACGRANFVGFRYRCAKCGN---FQMCQECFWWGRVSGGHNLEHEVKENHPVNKLV  246 (275)
Q Consensus       183 ~~~~~~h-~~~Cd~C~~~pI~G~RykC~~C~~---~dLC~~C~~~g~~~~~H~~~H~m~e~~~~~~~~  246 (275)
                      +.+.++| ++.||+|.+.||.|.||||++|+|   ||||+.||+.|..++.|+.+|+|+++..+..|.
T Consensus        13 ~~~~~~H~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~~~H~~~H~~~~i~~~~~p~   80 (82)
T 2fc7_A           13 ESGFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSSGPS   80 (82)
T ss_dssp             STTSCEESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSCCSSSCEEEECSCCCCC
T ss_pred             cccCCeeCcCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccccCCCCCCCCEEEeeCCCCCC
Confidence            4557788 999999999999999999999999   999999999999999999999999999888774

>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6

Probab=99.55  E-value=8.1e-16  Score=119.32  Aligned_cols=54  Identities=30%  Similarity=0.630  Sum_probs=46.5

Q ss_pred             ccCCCCc-CcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecC
Q psy4949         183 AVESTSH-PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHP  241 (275)
Q Consensus       183 ~~~~~~h-~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~  241 (275)
                      ....+.| ++.||+|++.||.|.||||++|+|||||+.||+.|.    | ..|+|..+..
T Consensus        23 ~~~~~~H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~----H-~~H~f~~i~~   77 (98)
T 2dip_A           23 KERLDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC----H-LSHTFTFREK   77 (98)
T ss_dssp             SSCCSSCCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS----G-GGSCEEECCS
T ss_pred             cccccccCCCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC----C-CCCCeeEecC
Confidence            3446788 699999999999999999999999999999998763    6 7898887643

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.51  E-value=7.3e-14  Score=121.85  Aligned_cols=138  Identities=14%  Similarity=0.308  Sum_probs=105.0

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHHH------------HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLLL------------NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~~------------~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..||..|.+..|+ +.|+.++...++.            ..+|+.||.|++|.|++.||..+++.++.+..+++++++|
T Consensus        66 i~~l~~~F~~~d~~-G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F  144 (229)
T 3dd4_A           66 LQILYRGFKNECPS-GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAF  144 (229)
T ss_dssp             HHHHHHHHHTTCCS-CCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-CCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHH
Confidence            56788888776666 6788777766644            3699999999999999999999999999999999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhcc-CCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcccchh
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVL-ESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACLIWL  175 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~g-E~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~lvWL  175 (275)
                      +.| .|++|.|+++||..+++.+..+..... .......++..++.+|..     ||.||.+||+.++.++  |..+..+
T Consensus       145 ~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~--~~~~~~~  222 (229)
T 3dd4_A          145 NLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD--ENIMRSM  222 (229)
T ss_dssp             HHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTC--HHHHHHH
T ss_pred             HHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC--HHHHHHH
Confidence            999 699999999999999998765432110 000111234566666653     6899999999999875  6544443

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.45  E-value=1.6e-12  Score=108.34  Aligned_cols=139  Identities=18%  Similarity=0.332  Sum_probs=102.4

Q ss_pred             HHHHHHhhcCCCCCccChHHHHHHHH------------HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchh
Q psy4949          37 SLYHNLNKRLPVSQQVHVEVLSGLLL------------NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQ  104 (275)
Q Consensus        37 ~lY~~~~k~~P~~~~v~~~~~~~l~~------------~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~l  104 (275)
                      .+|..+-+.+++ +.|+.++...++.            .-+|+.||.+++|.|++.||+.++..+..+...++++++|+.
T Consensus        29 ~~f~~~D~~~~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~  107 (190)
T 2l2e_A           29 QWYKGFFKDCPS-GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQL  107 (190)
T ss_dssp             HHHHHHHHHSCC-CEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhH
Confidence            356666554333 5666666555543            348999999999999999999999999888899999999999


Q ss_pred             h-ccCCCceeHHHHHHHHHHHHhchhhccCCCC-CCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcccchhhh
Q psy4949         105 L-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS-FSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACLIWLPL  177 (275)
Q Consensus       105 y-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~-f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~lvWL~~  177 (275)
                      + .|++|.|+..||..+++.++.+.......+. ...+++.++.+|..     +|.|+.+||+.++.+.  |..+.|+..
T Consensus       108 ~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~--~~~~~~l~~  185 (190)
T 2l2e_A          108 YDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD--PTIVSALSL  185 (190)
T ss_dssp             HCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC--THHHHHHHT
T ss_pred             ccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC--cHHHHHHHH
Confidence            9 6999999999999999887554321111111 12235667777764     6899999999999765  666666654


Q ss_pred             h
Q psy4949         178 L  178 (275)
Q Consensus       178 ~  178 (275)
                      .
T Consensus       186 ~  186 (190)
T 2l2e_A          186 Y  186 (190)
T ss_dssp             T
T ss_pred             H
Confidence            4

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.45  E-value=2.5e-13  Score=120.22  Aligned_cols=138  Identities=18%  Similarity=0.379  Sum_probs=108.9

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..+|..|.+..++ +.|+.++...++            +..+|+.||.|++|.|++.||+.++..+..+...++++++|
T Consensus        93 i~~l~~~fd~~~~~-G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F  171 (256)
T 2jul_A           93 LQSLYRGFKNECPT-GLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAF  171 (256)
T ss_dssp             HHHHHHHHHHHCTT-SSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-CcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHH
Confidence            66788888776665 678877776654            34589999999999999999999999999999999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCC--CCC--CCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCccc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLES--PSF--SYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACL  172 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~--~~f--~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~l  172 (275)
                      +.+ .|++|.|+.+||..+++.+...   +|..  +..  ..++..++.+|..     +|.|+.+||+.++.++  |..+
T Consensus       172 ~~~D~d~dG~I~~~Ef~~~l~~~~~~---~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~--~~l~  246 (256)
T 2jul_A          172 NLYDINKDGCITKEEMLAIMKSIYDM---MGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKD--ENIM  246 (256)
T ss_dssp             HHTCCSSSSCBCHHHHHHHHHHHHHH---CCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHC--SSHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHHHHHH---hCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhC--HHHH
Confidence            999 6999999999999999887543   2311  111  1246677777764     6899999999999876  6666


Q ss_pred             chhhhh
Q psy4949         173 IWLPLL  178 (275)
Q Consensus       173 vWL~~~  178 (275)
                      -++..+
T Consensus       247 ~~l~~~  252 (256)
T 2jul_A          247 NSMQLF  252 (256)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            666544

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.42  E-value=1.4e-12  Score=108.53  Aligned_cols=138  Identities=20%  Similarity=0.347  Sum_probs=99.2

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..+|..|-+..++ +.|+.++...++            +..+|+.||.+++|.|++.||..++..+..+...++++.+|
T Consensus        27 i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 1g8i_A           27 VQQWYKGFIKDCPS-GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAF  105 (190)
T ss_dssp             HHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC-CcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            34445544443222 455555444443            34589999999999999999999999999899999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC----CCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCccc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS----FSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACL  172 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~----f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~l  172 (275)
                      +.+ .|++|.|+..||..+++.++.+   +|+...    ...+++.++.+|..     +|.|+.+||+.++.+.  |..+
T Consensus       106 ~~~D~d~~G~i~~~e~~~~l~~~~~~---~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~--~~~~  180 (190)
T 1g8i_A          106 KLYDLDNDGYITRNEMLDIVDAIYQM---VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD--PSIV  180 (190)
T ss_dssp             HHHCTTCSSEEEHHHHHHHHHHHHHH---C-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC--HHHH
T ss_pred             HhhcCCCCCeECHHHHHHHHHHHHHH---hCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC--hHHH
Confidence            999 6999999999999999887543   232111    11235667777764     6899999999999875  6655


Q ss_pred             chhhhh
Q psy4949         173 IWLPLL  178 (275)
Q Consensus       173 vWL~~~  178 (275)
                      .|+...
T Consensus       181 ~~~~~~  186 (190)
T 1g8i_A          181 QALSLY  186 (190)
T ss_dssp             HHHCCB
T ss_pred             HHHhhh
Confidence            565543

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.41  E-value=4.5e-12  Score=105.39  Aligned_cols=138  Identities=17%  Similarity=0.258  Sum_probs=101.6

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..+|..|.+..++ +.|+.++...++            +.-+|+.||.+++|.|++.||+.++..+..+...++++++|
T Consensus        27 i~~~~~~fd~~~~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 1fpw_A           27 IQQWHKGFLRDCPS-GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAF  105 (190)
T ss_dssp             HHHHHHHHHHHCTT-CCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHH
T ss_pred             HHHHHHHHHHHCCC-CcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHHHHHH
Confidence            44555555444222 456655555543            34589999999999999999999999999888999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC----CCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCccc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS----FSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACL  172 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~----f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~l  172 (275)
                      +.+ .|++|.|+..||..++..++.+   +|....    -..++..++.+|..     +|.|+.+||+.++.+.  |..+
T Consensus       106 ~~~D~d~~G~i~~~ef~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~--~~~~  180 (190)
T 1fpw_A          106 ELYDLNHDGYITFDEMLTIVASVYKM---MGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD--PSII  180 (190)
T ss_dssp             HHHCSSCSSEEEHHHHHHHHHHHHTT---SCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS--TTHH
T ss_pred             HHhcCCCCCcCcHHHHHHHHHHHHHH---hccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC--hHHH
Confidence            999 6999999999999999887554   232111    11235667777764     6899999999999775  6656


Q ss_pred             chhhhh
Q psy4949         173 IWLPLL  178 (275)
Q Consensus       173 vWL~~~  178 (275)
                      .|+...
T Consensus       181 ~~~~~~  186 (190)
T 1fpw_A          181 GALNLY  186 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHhhc
Confidence            565543

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.40  E-value=2e-12  Score=112.39  Aligned_cols=133  Identities=17%  Similarity=0.342  Sum_probs=102.8

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHHH------------HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLLL------------NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~~------------~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..+|..|.+..++ +.|+.++...++.            ..+|+.||.|++|.|++.||+.++..+..+...++++++|
T Consensus        53 i~~l~~~Fd~~d~~-G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F  131 (224)
T 1s1e_A           53 LQVLYRGFKNECPS-GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF  131 (224)
T ss_dssp             HHHHHHHHHHHCTT-SCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHH
Confidence            56677777765454 6777777665543            4689999999999999999999999999999999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCC----CCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCccc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLES----PSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACL  172 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~----~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~l  172 (275)
                      +.+ .|++|.|+..||..+++.+..+   +|+.    .+-..++..++.+|..     +|.|+.+||+.++.++  |..+
T Consensus       132 ~~~D~d~dG~Is~~E~~~~l~~~~~~---~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~--~~l~  206 (224)
T 1s1e_A          132 NLYDINKDGYINKEEMMDIVKAIYDM---MGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED--DNIM  206 (224)
T ss_dssp             HHHCTTCCSEECHHHHHHHHHHHHHH---HTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC--HHHH
T ss_pred             HHHcCCCCCeECHHHHHHHHHHHHHH---hcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC--HHHH
Confidence            999 6999999999999999877543   2321    1111234667777764     6899999999999876  5443


Q ss_pred             c
Q psy4949         173 I  173 (275)
Q Consensus       173 v  173 (275)
                      .
T Consensus       207 ~  207 (224)
T 1s1e_A          207 R  207 (224)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.38  E-value=4.1e-12  Score=105.21  Aligned_cols=112  Identities=16%  Similarity=0.342  Sum_probs=87.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC--C-
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS--F-  137 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~--f-  137 (275)
                      +.-+|+.||.+++|.|++.||..++..+..+...++++.+|+.+ .|++|.|+..||..+++.+..+   +|+.+.  . 
T Consensus        58 ~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~---~g~~~~~~~~  134 (183)
T 1s6c_A           58 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDM---MGKYTYPVLK  134 (183)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHH---TC--------
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHH---hccccCcCcc
Confidence            34689999999999999999999999999999999999999999 6999999999999999876433   232211  1 


Q ss_pred             -CCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcccchhhhh
Q psy4949         138 -SYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACLIWLPLL  178 (275)
Q Consensus       138 -~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~lvWL~~~  178 (275)
                       ...+..++.+|..     +|.|+.+||+.++.+.  |..+.|+..+
T Consensus       135 ~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~--~~~~~~l~~~  179 (183)
T 1s6c_A          135 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED--DNIMRSLQLF  179 (183)
T ss_dssp             ---CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC--CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcC--hHHHHHHHHh
Confidence             1124666666663     6899999999998664  6666666544

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.35  E-value=1.1e-11  Score=103.22  Aligned_cols=128  Identities=20%  Similarity=0.387  Sum_probs=98.0

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHH------------HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGL------------LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l------------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..+|..|-+.+++ +.|+.++...+            .+.-+|+.||.+++|.|++.||..++..+..+...++++.+|
T Consensus        27 i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f  105 (193)
T 1bjf_A           27 IQEWYKGFLRDCPS-GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAF  105 (193)
T ss_dssp             HHHHHHHHHHHSTT-SEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCC-CCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            45566666655444 56666665544            246799999999999999999999999999999999999999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCC----CchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS----YTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~----~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +.+ .|++|.|+..||..++..++..   +|+.....    ..+..++.+|..     +|.|+.+||+.++.++
T Consensus       106 ~~~D~d~~G~I~~~E~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  176 (193)
T 1bjf_A          106 SMYDLDGNGYISKAEMLEIVQAIYKM---VSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD  176 (193)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHHTT---CCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred             hhcCCCCCCeECHHHHHHHHHHHHHH---hccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcC
Confidence            999 7999999999999999876443   23211111    124567777764     6899999999999875

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.35  E-value=1e-11  Score=105.07  Aligned_cols=139  Identities=17%  Similarity=0.294  Sum_probs=99.1

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhch
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFS  103 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~  103 (275)
                      +..+|..+-+.+++ +.|+.++...+           .+..+|+.||.+++|.|++.||+.++..+..+...++++.+|+
T Consensus        24 l~~~f~~~D~~~~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~  102 (204)
T 1jba_A           24 LQEWYKKFLEECPS-GTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK  102 (204)
T ss_dssp             HHHHHHHHHSSSTT-CCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-CCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHH
Confidence            44555555444223 45555544433           2457899999999999999999999999999999999999999


Q ss_pred             hh-ccCCCceeHHHHHHHHHHHHhchhhcc-CC--CCC---CCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcc
Q psy4949         104 QL-CDCNGHLVAWKFNEYLQDVLAIPAAVL-ES--PSF---SYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPAC  171 (275)
Q Consensus       104 ly-~D~nG~i~~~el~~~L~~i~~i~~~~g-E~--~~f---~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~  171 (275)
                      .+ .|++|.|+..||..+++.+..+.+... +.  ...   ..++..++.+|..     +|.|+.+||+.++.++  |..
T Consensus       103 ~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~--~~~  180 (204)
T 1jba_A          103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD--KWV  180 (204)
T ss_dssp             HHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT--TTH
T ss_pred             HhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC--hHH
Confidence            99 699999999999999988754322110 00  000   1235567777663     6899999999999765  555


Q ss_pred             cchhh
Q psy4949         172 LIWLP  176 (275)
Q Consensus       172 lvWL~  176 (275)
                      ..++.
T Consensus       181 ~~~~~  185 (204)
T 1jba_A          181 MKMLQ  185 (204)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.34  E-value=2.2e-12  Score=111.61  Aligned_cols=128  Identities=16%  Similarity=0.212  Sum_probs=94.9

Q ss_pred             HHHHHHHHhhcCC-----C--C--CccChHHHHH-------HHHHHHHHhhcCCCCCe-eehHHHHHHHHHhcCC-Chhh
Q psy4949          35 LSSLYHNLNKRLP-----V--S--QQVHVEVLSG-------LLLNWLLSAYSVESLGR-IRVFSIKVALATMCSG-KLMD   96 (275)
Q Consensus        35 L~~lY~~~~k~~P-----~--~--~~v~~~~~~~-------l~~~~lf~~fD~~~~G~-I~~~ef~~aLs~Lc~G-~l~d   96 (275)
                      +..||..|.+..+     .  .  +.|+.++...       .....||+.||.+++|. |+|.||+.+++.+..+ ..++
T Consensus        50 i~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~l~~lg~~~~~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~  129 (214)
T 2l4h_A           50 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDI  129 (214)
T ss_dssp             HHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTTCHHHHTSTTHHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHH
T ss_pred             HHHHHHHHHHhCcccccccccccCCcCCHHHHHHhhccCCChHHHHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHH
Confidence            5667888877665     2  2  6777666544       12345899999999999 9999999999999877 4577


Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc--hHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT--DTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~--e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +++++|++| .|++|.|++.||..+|+.+....    ........  +..++.+|..     +|.|+.+||+.++.+.
T Consensus       130 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~----~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~  203 (214)
T 2l4h_A          130 KSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEG----EDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS  203 (214)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSS----SCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHTC
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccc----cCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhC
Confidence            999999999 69999999999999998764310    00111111  3345556653     6899999999999765

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.33  E-value=1.6e-11  Score=103.89  Aligned_cols=135  Identities=17%  Similarity=0.293  Sum_probs=100.8

Q ss_pred             HHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhch
Q psy4949          36 SSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFS  103 (275)
Q Consensus        36 ~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~  103 (275)
                      ..+|..+-+..++ +.|+.++...++            +.-+|+.||.+++|.|++.||+.++..+..+...++++.+|+
T Consensus        36 ~~~f~~~d~~~~~-G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~  114 (207)
T 2d8n_A           36 CSWYQSFLKDCPT-GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFS  114 (207)
T ss_dssp             HHHHHHHHHHCTT-SEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHH
T ss_pred             HHHHHHHHhhCCC-CCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            3466666554333 567766665553            345899999999999999999999999988888999999999


Q ss_pred             hh-ccCCCceeHHHHHHHHHHHHhchhhcc----CCCCC--CCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcc
Q psy4949         104 QL-CDCNGHLVAWKFNEYLQDVLAIPAAVL----ESPSF--SYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPAC  171 (275)
Q Consensus       104 ly-~D~nG~i~~~el~~~L~~i~~i~~~~g----E~~~f--~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~  171 (275)
                      .+ .|++|.|+..||..+++.+..+   +|    +..+-  ...+..++.+|..     +|.|+.+||+.++.+.  |..
T Consensus       115 ~~D~d~~G~I~~~E~~~~l~~~~~~---~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~--~~~  189 (207)
T 2d8n_A          115 LYDVDGNGTISKNEVLEIVMAIFKM---ITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN--KEI  189 (207)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHHHHH---SCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC--HHH
T ss_pred             HhcCCCCCeEcHHHHHHHHHHHHHH---hccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC--hHH
Confidence            99 6999999999999999886443   22    11111  1234567777764     6899999999999875  655


Q ss_pred             cchhh
Q psy4949         172 LIWLP  176 (275)
Q Consensus       172 lvWL~  176 (275)
                      +.++.
T Consensus       190 ~~~~~  194 (207)
T 2d8n_A          190 LRLIQ  194 (207)
T ss_dssp             HHHHS
T ss_pred             HHHHh
Confidence            55554

>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6

Probab=99.32  E-value=4.2e-13  Score=92.36  Aligned_cols=45  Identities=20%  Similarity=0.619  Sum_probs=39.1

Q ss_pred             CcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCC
Q psy4949         190 PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV  242 (275)
Q Consensus       190 ~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~  242 (275)
                      ++.||+|+.. | |.||+|++|+|||||+.||..+    .|  .|+|.++..+
T Consensus         6 ~~~Cd~C~~~-i-g~R~~C~~C~dyDLC~~C~~~~----~H--~H~m~~~~~~   50 (52)
T 1tot_A            6 VYTCNECKHH-V-ETRWHCTVCEDYDLCINCYNTK----SH--THKMVKWGLG   50 (52)
T ss_dssp             CEEETTTTEE-E-SSEEEESSSSSCEECHHHHHHH----CC--CSSEEEECSS
T ss_pred             EEECCCCCCC-C-cceEEcCCCCCchhHHHHHhCC----CC--CCceEEecCC
Confidence            6899999984 5 9999999999999999999765    35  7999998654

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.31  E-value=2.8e-11  Score=102.44  Aligned_cols=122  Identities=16%  Similarity=0.259  Sum_probs=90.5

Q ss_pred             CccChHHHHHHH----------HHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHH
Q psy4949          50 QQVHVEVLSGLL----------LNWLLSAYSVESLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKF  117 (275)
Q Consensus        50 ~~v~~~~~~~l~----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el  117 (275)
                      |.|+.++....+          +..+|+.||.+++|.|++.||..++..+. .+...++++.+|+.+ .|++|.|+..||
T Consensus        54 G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~  133 (207)
T 2ehb_A           54 GLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL  133 (207)
T ss_dssp             SCEEHHHHHHHHHSCTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHH
T ss_pred             CccCHHHHHHHHhccccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            566666665543          35599999999999999999999999877 457889999999999 699999999999


Q ss_pred             HHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcccchhh
Q psy4949         118 NEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPACLIWLP  176 (275)
Q Consensus       118 ~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~lvWL~  176 (275)
                      ..+++.++.   ..|+..+-...+..++.+|..     +|.|+.+||+.++.+.  |..+.++.
T Consensus       134 ~~~l~~~~~---~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~--~~~~~~~~  192 (207)
T 2ehb_A          134 KEMVVALLH---ESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN--PSLIKNMT  192 (207)
T ss_dssp             HHHHHHHHH---HHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--GGGGGGGC
T ss_pred             HHHHHHHHH---HcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC--hHHHHHhc
Confidence            999886532   223221100012345555553     6899999999999876  65555553

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=99.30  E-value=1.2e-12  Score=104.78  Aligned_cols=67  Identities=13%  Similarity=0.169  Sum_probs=58.4

Q ss_pred             HHHHHHHHH-----hhcCCCCCccChHHHHHH-------------HHHHHHHhhcCCC--------CCeeehHHHHHHHH
Q psy4949          34 LLSSLYHNL-----NKRLPVSQQVHVEVLSGL-------------LLNWLLSAYSVES--------LGRIRVFSIKVALA   87 (275)
Q Consensus        34 ~L~~lY~~~-----~k~~P~~~~v~~~~~~~l-------------~~~~lf~~fD~~~--------~G~I~~~ef~~aLs   87 (275)
                      -|++||+.|     .+.||+ +.|+.+++..+             ++.+||++||.++        +|+|+|.||+++||
T Consensus        26 elk~~y~~F~~g~~~k~cp~-G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LS  104 (118)
T 1tuz_A           26 KVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFS  104 (118)
T ss_dssp             CHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHccccccccCCC-CCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHH
Confidence            378899999     589998 68887776655             4567999999975        89999999999999


Q ss_pred             HhcCCChhhHHHHh
Q psy4949          88 TMCSGKLMDKLRYI  101 (275)
Q Consensus        88 ~Lc~G~l~dKlr~~  101 (275)
                      +|++|+++|||+|+
T Consensus       105 ll~rG~~edKLewa  118 (118)
T 1tuz_A          105 LLEGGRPEDKLEWS  118 (118)
T ss_dssp             HHHSCCCSCCCCCC
T ss_pred             HhcCCCHHHhhccC
Confidence            99999999999995

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.29  E-value=4.4e-11  Score=103.48  Aligned_cols=140  Identities=14%  Similarity=0.249  Sum_probs=98.9

Q ss_pred             CCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH----------HHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCCh
Q psy4949          26 VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL----------LNWLLSAYSVESLGRIRVFSIKVALATMC-SGKL   94 (275)
Q Consensus        26 l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l   94 (275)
                      ++..++.. +..+|..+-++.+..|.|+.++....+          +.-+|+.+|.+++|.|++.||..++..+. .+..
T Consensus        42 ls~~ei~~-l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~  120 (226)
T 2zfd_A           42 FSVSEIEA-LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI  120 (226)
T ss_dssp             CCHHHHHH-HHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCH
T ss_pred             CCHHHHHH-HHHHHHHhCcccCCCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCH
Confidence            45555322 445555554432234677877766554          34599999999999999999999999887 5688


Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCC
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPG  168 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~  168 (275)
                      .++++.+|+.+ .|++|.|++.||..+++.++.   ..|+..+-...+..++.+|..     +|.|+.+||+.++.+.  
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~---~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~--  195 (226)
T 2zfd_A          121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA---ESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH--  195 (226)
T ss_dssp             HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHH---HTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHH---HcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC--
Confidence            89999999999 699999999999999886532   223321100113345655543     6899999999999876  


Q ss_pred             Ccc
Q psy4949         169 PAC  171 (275)
Q Consensus       169 Pq~  171 (275)
                      |..
T Consensus       196 ~~~  198 (226)
T 2zfd_A          196 PSL  198 (226)
T ss_dssp             GGG
T ss_pred             hHH
Confidence            544

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.24  E-value=8.9e-11  Score=98.78  Aligned_cols=100  Identities=19%  Similarity=0.382  Sum_probs=81.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC-
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY-  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~-  139 (275)
                      +.-+|+.||.+++|+|++.||+.++..+..+...++++++|+.+ .|++|.|+..||..++..+..+..   .  .... 
T Consensus        54 ~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~---~--~~~~~  128 (198)
T 2r2i_A           54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINR---C--NEAMT  128 (198)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGG---S--SSCCC
T ss_pred             HHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcC---C--Cchhh
Confidence            56789999999999999999999999999999999999999999 699999999999999887644321   0  0111 


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      .++.++.+|..     +|.|+.+||+.++.++
T Consensus       129 ~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  160 (198)
T 2r2i_A          129 AEEFTNMVFDKIDINGDGELSLEEFMEGVQKD  160 (198)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence            24456666653     6899999999998764

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.22  E-value=1.9e-10  Score=92.51  Aligned_cols=133  Identities=20%  Similarity=0.242  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHcC-CCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENG-LNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~-l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      +..+.++|+... .+   .+..|+..++..+|..+    ..      .++.++     +..+|+.+|.+++|.|++.+|.
T Consensus        12 ~~~l~~~F~~~D~~~---~~G~i~~~e~~~~l~~~----~~------~~~~~~-----~~~l~~~~D~~~~g~i~~~eF~   73 (158)
T 2jnf_A           12 VKLLETAFRDFETPE---GSGRVSTDQIGIILEVL----GI------QQTKST-----IRQLIDEFDPFGNGDIDFDSFK   73 (158)
T ss_dssp             HHHHHHHHHHSBCSS---SCSSEEHHHHHHHHHHT----TC------SCSHHH-----HHHHHHHHCTTCCSEECHHHHH
T ss_pred             HHHHHHHHHHhCCCC---CCCcCcHHHHHHHHHHh----CC------CCCHHH-----HHHHHHHhCCCCCCcCcHHHHH
Confidence            344556666655 33   35567777755555442    11      112121     4578899999999999999999


Q ss_pred             HHHHHhcCC-----ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CC
Q psy4949          84 VALATMCSG-----KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NG  152 (275)
Q Consensus        84 ~aLs~Lc~G-----~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~  152 (275)
                      .++......     ...++++.+|+.+ .|++|.|++.+|..+|+.+       |+.    .++..++.+|..     +|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~D~d~dg  142 (158)
T 2jnf_A           74 IIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-------DET----LSSEDLDAMIDEIDADGSG  142 (158)
T ss_dssp             HHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH-------CTT----CCHHHHHHHHHHHCSSCCS
T ss_pred             HHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-------CCc----CCHHHHHHHHHHhCCCCCC
Confidence            999988766     6788999999999 6999999999999988764       221    234555555543     68


Q ss_pred             cccHHHHHHHHhcC
Q psy4949         153 KVTVNDFMDTMMSE  166 (275)
Q Consensus       153 ~Is~~eFl~~~~~d  166 (275)
                      .|+.+||+.++.+.
T Consensus       143 ~i~~~eF~~~~~~~  156 (158)
T 2jnf_A          143 TVDFEEFMGVMTGG  156 (158)
T ss_dssp             EECSHHHHHHTSSC
T ss_pred             cEeHHHHHHHHhcc
Confidence            99999999988654

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.20  E-value=4.2e-11  Score=102.41  Aligned_cols=100  Identities=16%  Similarity=0.351  Sum_probs=81.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.+|.+++|+|++.||..++..+..+...++++.+|+.+ .|++|.|+..||..++..+..+...  +   -...
T Consensus        59 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~--~---~~~~  133 (211)
T 2ggz_A           59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ--Q---TLSP  133 (211)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCC--C---SCTH
T ss_pred             HHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCC--c---cccH
Confidence            56789999999999999999999999999999999999999999 6999999999999988876432100  0   0112


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      ++.++.+|..     +|.|+.+||+.++.++
T Consensus       134 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  164 (211)
T 2ggz_A          134 EEFINLVFHKIDINNDGELTLEEFINGMAKD  164 (211)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC
Confidence            4456666653     6899999999999875

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.17  E-value=3.9e-10  Score=89.48  Aligned_cols=92  Identities=15%  Similarity=0.228  Sum_probs=73.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCCh-----hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKL-----MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS  136 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l-----~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~  136 (275)
                      ..+++.||.+++|.|++.+|..++........     .++++.+|+.+ .|++|.|+++||..+|+.++      |..  
T Consensus        50 ~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~------~~~--  121 (153)
T 3ox6_A           50 IELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALL------GHQ--  121 (153)
T ss_dssp             HHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH------SSC--
T ss_pred             HHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh------cCC--
Confidence            46889999999999999999999987766554     57889999999 69999999999999988742      221  


Q ss_pred             CCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         137 FSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       137 f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                        .++..++.+|..     +|.|+.+||+.++.
T Consensus       122 --~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A          122 --VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             --CCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             --CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence              134455555543     68999999999863

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.16  E-value=4.8e-10  Score=91.34  Aligned_cols=139  Identities=15%  Similarity=0.193  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH------HHHHHHHhhcCCCCCeee
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL------LLNWLLSAYSVESLGRIR   78 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l------~~~~lf~~fD~~~~G~I~   78 (275)
                      +..+-++|+....+   .+..|+..++...+..+...+...      .+.++..++      ....+|+.+|.+++|.|+
T Consensus         6 ~~~l~~~F~~~D~d---~~G~i~~~el~~~~~~~l~~~g~~------~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~   76 (176)
T 1nya_A            6 SDRLKKRFDRWDFD---GNGALERADFEKEAQHIAEAFGKD------AGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLT   76 (176)
T ss_dssp             HHHHHHHHHHCCSS---CCSSBCSHHHHHHHHHHHHHTSSC------SSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBC
T ss_pred             HHHHHHHHHHHcCC---CCCcccHHHHHHHHHHHHHHcCCC------CCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEc
Confidence            45667788877654   367899999888777666654322      222333222      234789999999999999


Q ss_pred             hHHHHHHHHHhcCCCh--------hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc
Q psy4949          79 VFSIKVALATMCSGKL--------MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS  149 (275)
Q Consensus        79 ~~ef~~aLs~Lc~G~l--------~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~  149 (275)
                      +.||+.++..+..+..        .+.++.+|+.+ .|++|.|+..||..+++.+       |      .++..++.+|.
T Consensus        77 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-------g------~~~~~~~~~~~  143 (176)
T 1nya_A           77 EEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL-------G------MSKAEAAEAFN  143 (176)
T ss_dssp             HHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT-------T------CCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHh-------C------CCHHHHHHHHH
Confidence            9999999998876654        36789999999 6999999999999888753       2      24555666665


Q ss_pred             C-----CCcccHHHHHHHHhc
Q psy4949         150 G-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       150 ~-----d~~Is~~eFl~~~~~  165 (275)
                      .     +|.|+.+||+.++..
T Consensus       144 ~~D~d~dg~i~~~ef~~~~~~  164 (176)
T 1nya_A          144 QVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHCTTCSSEEEHHHHHHHHSC
T ss_pred             HhCCCCCCCCcHHHHHHHHHH
Confidence            3     689999999998853

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.15  E-value=3.5e-10  Score=91.18  Aligned_cols=140  Identities=12%  Similarity=0.074  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH------HHHHHHHhhcCCCCCee
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL------LLNWLLSAYSVESLGRI   77 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l------~~~~lf~~fD~~~~G~I   77 (275)
                      .+..+-++|+....+   .+..|+..++..++..++..+... |+     .++...+      ....+|+.+|.+++|+|
T Consensus         2 ~~~~l~~~F~~~D~d---~dG~i~~~E~~~~l~~~~~~~g~~-~~-----~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i   72 (166)
T 3akb_A            2 YERRIAARFTTFDQD---GNGHIDRSDFSGAAKAMLAEFGVA-AR-----SDRGQALYGGAEALWQGLAGIADRDGDQRI   72 (166)
T ss_dssp             HHHHHHHHHHHHCTT---CSSEECHHHHHHHHHHHHHHHTCC-TT-----SHHHHHHHHHHHHHHHHHHHHHCTTSSSCE
T ss_pred             HHHHHHHHHhHHcCC---CCCCcCHHHHHHHHHHHHHHcCCC-CC-----CHHHHHHHHHHHHHHHHHHHHhCCCCCCcC
Confidence            455667788777654   367899999999888887765432 22     2222222      34567999999999999


Q ss_pred             ehHHHHHHHHHhcCCC-------hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc
Q psy4949          78 RVFSIKVALATMCSGK-------LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS  149 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~-------l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~  149 (275)
                      ++.||..++..+....       ..++++.+|+.+ .|++|.|+..||..+++.+       |      .++..++.+|.
T Consensus        73 ~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~-------~------~~~~~~~~~~~  139 (166)
T 3akb_A           73 TREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF-------G------VPEDLARQAAA  139 (166)
T ss_dssp             EHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHT-------T------CCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------C------CCHHHHHHHHH
Confidence            9999999888775443       145589999999 6999999999999888753       2      24455666655


Q ss_pred             C-----CCcccHHHHHHHHhc
Q psy4949         150 G-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       150 ~-----d~~Is~~eFl~~~~~  165 (275)
                      .     +|.|+.+||+..+.+
T Consensus       140 ~~D~d~dg~i~~~ef~~~~~~  160 (166)
T 3akb_A          140 ALDTDGDGKVGETEIVPAFAR  160 (166)
T ss_dssp             HHCTTCSSBCCHHHHHHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHHHH
Confidence            3     689999999998753

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.15  E-value=1.1e-09  Score=87.97  Aligned_cols=128  Identities=12%  Similarity=0.206  Sum_probs=90.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHH-hc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALAT-MC   90 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~-Lc   90 (275)
                      ...++..++. -|..+|..+-+.  ..|.|+.++...++           +..+++.||.+++|.|++.+|+.++.. +.
T Consensus        14 ~~~l~~~~~~-~l~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~   90 (161)
T 3fwb_A           14 NSELLEEQKQ-EIYEAFSLFDMN--NDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKIL   90 (161)
T ss_dssp             TTTSCHHHHH-HHHHHHHHHCTT--SSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHH-HHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHh
Confidence            3445554432 244455544333  12455554443332           346899999999999999999999875 45


Q ss_pred             CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .....++++.+|+.+ .|++|.|++.||..+|+.+       |+    ..+++.++.+|..     +|.|+.+||+.++.
T Consensus        91 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------~~----~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A           91 KRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL-------GE----TLTDEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             TCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TC----CCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            677789999999999 6999999999999888753       22    2245556666653     68999999999875

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.15  E-value=4.6e-10  Score=90.23  Aligned_cols=95  Identities=16%  Similarity=0.177  Sum_probs=75.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC--CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS--GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~--G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      ..+ +.+|.+++|.|++.+|+.++.....  ....++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .
T Consensus        50 ~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~  117 (156)
T 1wdc_C           50 FAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL-------GER----L  117 (156)
T ss_dssp             HHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-------SSC----C
T ss_pred             HHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------CCC----C
Confidence            456 8999999999999999999998876  67789999999999 6999999999999888752       322    1


Q ss_pred             chHHHhhhhc-------CCCcccHHHHHHHHhcCCCC
Q psy4949         140 TDTLAQEIFS-------GNGKVTVNDFMDTMMSEPGP  169 (275)
Q Consensus       140 ~e~~v~~cF~-------~d~~Is~~eFl~~~~~d~~P  169 (275)
                      ++..++.+|.       ++|.|+.+||+.++.+.+.|
T Consensus       118 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  154 (156)
T 1wdc_C          118 SDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP  154 (156)
T ss_dssp             CHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCSCC
T ss_pred             CHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCCCC
Confidence            3333443333       26899999999999887654

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.13  E-value=3.3e-10  Score=93.91  Aligned_cols=98  Identities=11%  Similarity=0.167  Sum_probs=74.8

Q ss_pred             HHHHHhhcCCCCCe-eehHHHHHHHHHhcCCCh-hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSVESLGR-IRVFSIKVALATMCSGKL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~~~G~-I~~~ef~~aLs~Lc~G~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+++.+|.+++|. |++.||+.++..+..+.. +++++.+|+.| .|++|.|++.||..+|+.+....      .....
T Consensus        63 ~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~------~~~~~  136 (183)
T 1dgu_A           63 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEG------EDTRL  136 (183)
T ss_dssp             HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSS------CCCHH
T ss_pred             HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccc------ccCCC
Confidence            35889999999999 999999999999887744 66999999999 69999999999999988753210      00001


Q ss_pred             chHH----HhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         140 TDTL----AQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       140 ~e~~----v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +++.    ++.+|..     +|.|+.+||+.++.+.
T Consensus       137 ~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  172 (183)
T 1dgu_A          137 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS  172 (183)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCSS
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhC
Confidence            2222    2335543     6899999999998654

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.11  E-value=1.3e-09  Score=86.06  Aligned_cols=130  Identities=16%  Similarity=0.226  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+....+   .+..|+..++..+|..+    ..      .++.++     +..+++.+|.+++|.|++.+|+.
T Consensus         5 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~----~~------~~~~~~-----~~~l~~~~d~~~~g~i~~~eF~~   66 (142)
T 2bl0_C            5 VSEFKEAFELFDSE---RTGFITKEGLQTVLKQF----GV------RVEPAA-----FNEMFNEADATGNGKIQFPEFLS   66 (142)
T ss_dssp             HHHHHHHHHHHCTT---CSSEEEHHHHHHHHHHH----TC------CCCHHH-----HHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCCcCcHHHHHHHHHHh----CC------CCCHHH-----HHHHHHHhCcCCCCeeeHHHHHH
Confidence            44566777766544   35679999977666554    11      122222     45788999999999999999999


Q ss_pred             HHHH-hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHHH
Q psy4949          85 ALAT-MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVND  158 (275)
Q Consensus        85 aLs~-Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~e  158 (275)
                      ++.. +......++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .++..++.+|    .++|.|+.+|
T Consensus        67 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~d~~dg~i~~~e  135 (142)
T 2bl0_C           67 MMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNL-------GDR----LKPHEFAEFLGITETEKGQIRYDN  135 (142)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHS-------SSC----CCHHHHHHHHHHHCCSSSEECSHH
T ss_pred             HHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCcEeHHH
Confidence            9987 55667889999999999 6999999999999888752       321    2344444444    3479999999


Q ss_pred             HHHHH
Q psy4949         159 FMDTM  163 (275)
Q Consensus       159 Fl~~~  163 (275)
                      |+..+
T Consensus       136 F~~~~  140 (142)
T 2bl0_C          136 FINTM  140 (142)
T ss_dssp             HHTTT
T ss_pred             HHHHH
Confidence            99876

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.10  E-value=2.1e-10  Score=95.09  Aligned_cols=140  Identities=12%  Similarity=0.159  Sum_probs=97.5

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+.++|+....+   .+..|+..|+..++..++.......+   ..... ...-.+..+|+.||.+++|.|++.||+.+
T Consensus        40 ~~l~~~F~~~D~d---~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~D~d~~g~i~~~ef~~~  112 (191)
T 3khe_A           40 KELTQIFRQLDNN---GDGQLDRKELIEGYRKLMQWKGDTVS---DLDSS-QIEAEVDHILQSVDFDRNGYIEYSEFVTV  112 (191)
T ss_dssp             HHHHHHHHHHCTT---CSSEECHHHHHHHHHHHHC-----CC---HHHHH-HHHHHHHHHHHHTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHcCC---CCCCCcHHHHHHHHHHHHhhcccccc---cccch-hhHHHHHHHHHHhCCCCCCcCCHHHHHHH
Confidence            3455566665433   35678888877777777533221110   11111 22334567999999999999999999999


Q ss_pred             HHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHH
Q psy4949          86 LATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDF  159 (275)
Q Consensus        86 Ls~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eF  159 (275)
                      +.........++++.+|+.+ .|++|.|+.+||..+++         ++    ..+++.++.+|..     +|.|+.+||
T Consensus       113 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---------~~----~~~~~~~~~~~~~~D~~~dg~i~~~eF  179 (191)
T 3khe_A          113 CMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG---------VT----EVDDETWHQVLQECDKNNDGEVDFEEF  179 (191)
T ss_dssp             HSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT---------SS----CCCHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred             HHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---------cC----CCCHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            87777777789999999999 69999999999987665         11    2245556666553     689999999


Q ss_pred             HHHHhc
Q psy4949         160 MDTMMS  165 (275)
Q Consensus       160 l~~~~~  165 (275)
                      +..+.+
T Consensus       180 ~~~~~~  185 (191)
T 3khe_A          180 VEMMQK  185 (191)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998854

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.10  E-value=1.6e-09  Score=87.49  Aligned_cols=92  Identities=16%  Similarity=0.236  Sum_probs=73.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      +..+++.+|.+++|.|++.+|...++..... ..+++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .
T Consensus        48 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-------g~~----~  116 (148)
T 2lmt_A           48 LQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINL-------GEK----V  116 (148)
T ss_dssp             HHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHH-------TCC----C
T ss_pred             HHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-------Ccc----c
Confidence            3467889999999999999999998877654 5678899999999 7999999999998888753       332    2


Q ss_pred             chHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949         140 TDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       140 ~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      ++..++.+|.     ++|.|+.+||+..+.
T Consensus       117 ~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A          117 TDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             CHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            3445555554     379999999999764

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.09  E-value=1.1e-10  Score=99.13  Aligned_cols=96  Identities=15%  Similarity=0.167  Sum_probs=68.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +..+|+.+|.+++|.|++.||+.++..+..+..+++++.+|+.+ .|++|.|+++||..++.....     +    ...+
T Consensus        95 ~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~-----~----~~~~  165 (197)
T 3pm8_A           95 IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDI-----E----NPLI  165 (197)
T ss_dssp             HHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC---------C----CHHH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc-----C----CCCC
Confidence            35689999999999999999999988887778899999999999 699999999999888875310     1    1112


Q ss_pred             hHHHhhhhc-----CCCcccHHHHHHHHhcC
Q psy4949         141 DTLAQEIFS-----GNGKVTVNDFMDTMMSE  166 (275)
Q Consensus       141 e~~v~~cF~-----~d~~Is~~eFl~~~~~d  166 (275)
                      ++.++.+|.     ++|.|+.+||+..+.++
T Consensus       166 ~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  196 (197)
T 3pm8_A          166 DKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK  196 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence            445555555     37999999999988653

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.07  E-value=1.2e-09  Score=88.81  Aligned_cols=94  Identities=13%  Similarity=0.226  Sum_probs=73.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      +..+|+.+|.+++|.|++.+|+.++.... .....++++.+|+.+ .|++|.|+++||..+|+.+       |+    .-
T Consensus        66 ~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~----~~  134 (169)
T 3qrx_A           66 IKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL-------GE----NL  134 (169)
T ss_dssp             HHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-------TC----CC
T ss_pred             HHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------CC----CC
Confidence            45689999999999999999999988654 334577899999999 6999999999999888753       22    12


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +++.++.+|..     +|.|+.+||+.++.+.
T Consensus       135 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  166 (169)
T 3qrx_A          135 TEEELQEMIAEADRNDDNEIDEDEFIRIMKKT  166 (169)
T ss_dssp             CHHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred             CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence            35556666653     6899999999988653

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.05  E-value=1.4e-09  Score=92.09  Aligned_cols=137  Identities=10%  Similarity=0.079  Sum_probs=89.7

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+....+   .+..|+..|+..+|..+....   .|+  .-.++.....+ .++|+.+|.+++|.|++.||..++
T Consensus        37 ~l~~~F~~~D~d---~~G~i~~~El~~~l~~~~~~~---~~~--~~~~~~l~~~~-~~lf~~~D~d~dg~i~~~EF~~~~  107 (208)
T 2hpk_A           37 RLYKRFDTFDLD---SDGKMEMDEVLYWPDRMRQLV---NAT--DEQVEKMRDAV-RVFFLHKGVEPVNGLLREDWVEAN  107 (208)
T ss_dssp             HHHHHHHHHCTT---CSSEECHHHHTHHHHHHHHHS---CCC--HHHHHHHHHHH-HHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred             HHHHHHHHhCCC---CCCCCCHHHHHHHHHHHHhhc---CCC--HHHHHHHHHHH-HHHHHHhCCCCCCeEcHHHHHHHH
Confidence            344555554433   245677777666666654311   122  00112222222 567799999999999999999998


Q ss_pred             H---------Hhc-C-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----
Q psy4949          87 A---------TMC-S-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----  149 (275)
Q Consensus        87 s---------~Lc-~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----  149 (275)
                      .         .+. . ...+++++.+|+.+ .|++|.|++.||..+++.+       |      .+++.++.+|.     
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-------g------~~~~~~~~~~~~~D~d  174 (208)
T 2hpk_A          108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF-------D------VPQEAAYTFFEKADTD  174 (208)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-------T------SCTTHHHHHHHHHCTT
T ss_pred             HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------C------cCHHHHHHHHHHhCCC
Confidence            6         332 2 33455589999999 6999999999999888753       2      12334455554     


Q ss_pred             CCCcccHHHHHHHHhc
Q psy4949         150 GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       150 ~d~~Is~~eFl~~~~~  165 (275)
                      ++|.|+.+||+.++..
T Consensus       175 ~dG~I~~~EF~~~~~~  190 (208)
T 2hpk_A          175 KSGKLERTELVHLFRK  190 (208)
T ss_dssp             CCSSBCHHHHHHHHHH
T ss_pred             CCCcCcHHHHHHHHHH
Confidence            3789999999998753

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.05  E-value=6.7e-10  Score=88.29  Aligned_cols=117  Identities=14%  Similarity=0.248  Sum_probs=86.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhh-cCCCCCeeehHHHHHHHHHh------cCCChh
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAY-SVESLGRIRVFSIKVALATM------CSGKLM   95 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~f-D~~~~G~I~~~ef~~aLs~L------c~G~l~   95 (275)
                      +..|+..++..+|..+    ..      .++.++     +..+++.+ |.+++|.|++.+|+.++...      ......
T Consensus        18 ~G~i~~~el~~~l~~~----g~------~~~~~~-----~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   82 (148)
T 1m45_A           18 QGAIAKDSLGDYLRAI----GY------NPTNQL-----VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT   82 (148)
T ss_dssp             CSEEEGGGHHHHHHHT----TC------CCCHHH-----HHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred             CCCCCHHHHHHHHHHh----CC------CCCHHH-----HHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccH
Confidence            5678899966666543    11      122222     45778999 99999999999999999987      677888


Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++++.+|+.+ .|++|.|++.+|..+|+.+       |+.    .++..++.+|..     +|.|+.+||+.++.+
T Consensus        83 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGL-------GEK----LTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-------TTC----CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            9999999999 6999999999999888752       321    245566666664     689999999998753

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.05  E-value=6.2e-10  Score=94.58  Aligned_cols=135  Identities=16%  Similarity=0.206  Sum_probs=92.4

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH-------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCC---------------
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL-------LNWLLSAYSVESLGRIRVFSIKVALATMCSG---------------   92 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~-------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G---------------   92 (275)
                      |..+|..+-++  ..|.|+.++...+.       ..-+++.||.+++|.|++.||..++......               
T Consensus        31 l~~~F~~~D~d--~dG~Is~~El~~~~~lg~~~~~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~  108 (208)
T 2ct9_A           31 LYSRFTSLDKG--ENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPL  108 (208)
T ss_dssp             HHHHHHHHCTT--CSSEECTGGGGGCHHHHTSTTHHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCT
T ss_pred             HHHHHHHHCCC--CCCcCcHHHHHHHHHcCCCCcHHHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhccccccccc
Confidence            45556555443  23567766554431       3458999999999999999999999877632               


Q ss_pred             -ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHh----hhhc-----CCCcccHHHHHH
Q psy4949          93 -KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ----EIFS-----GNGKVTVNDFMD  161 (275)
Q Consensus        93 -~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~----~cF~-----~d~~Is~~eFl~  161 (275)
                       ...++++.+|+.+ .|++|.|++.||..+|+.+      +|+.    .++..++    .+|.     +||.|+.+||+.
T Consensus       109 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~------~g~~----~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~  178 (208)
T 2ct9_A          109 NSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM------VGVN----ISDEQLGSIADRTIQEADQDGDSAISFTEFVK  178 (208)
T ss_dssp             TSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH------SCTT----CCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHH
T ss_pred             ccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH------hCCC----CCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence             2788999999999 6999999999999988864      1322    1233333    3354     368999999999


Q ss_pred             HHhcCCCCcccchhhhhhccc
Q psy4949         162 TMMSEPGPACLIWLPLLHRLT  182 (275)
Q Consensus       162 ~~~~d~~Pq~lvWL~~~~r~~  182 (275)
                      ++.+.+.+ ...-++.+...+
T Consensus       179 ~~~~~~~~-~~~~~~~~~~~~  198 (208)
T 2ct9_A          179 VLEKVDVE-QKMSIRFLHKLA  198 (208)
T ss_dssp             TTTTSCGG-GSHHHHHHHHHH
T ss_pred             HHhccChH-HHhhHHHHHHHH
Confidence            98764322 233344444433

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.04  E-value=1.5e-09  Score=86.85  Aligned_cols=130  Identities=17%  Similarity=0.225  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+-++|+...-+   .+..|+..++..+|..+-    .      ..+.++     +.-+++.+|.+++|.|++.+|+.
T Consensus         5 ~~~l~~~F~~~D~d---~~G~I~~~el~~~l~~~g----~------~~~~~~-----~~~~~~~~d~~~~g~i~~~eF~~   66 (143)
T 2obh_A            5 KQEIREAFDLFDAD---GTGTIDVKELKVAMRALG----F------EPKKEE-----IKKMISEIDKEGTGKMNFGDFLT   66 (143)
T ss_dssp             HHHHHHHHHTTCTT---CCSEEEGGGHHHHHHHTT----C------CCCHHH-----HHHHHHHHTTTCCSEEEHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCCcCcHHHHHHHHHHcC----C------CCCHHH-----HHHHHHHhCCCCCCeeeHHHHHH
Confidence            44566777766544   467799999776665431    1      122222     34577899999999999999998


Q ss_pred             HHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHH
Q psy4949          85 ALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVN  157 (275)
Q Consensus        85 aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~  157 (275)
                      .+..... ....+.++.+|+.+ .|++|.|+..+|..+++.       +|+.    .++..++.+|..     +|.|+.+
T Consensus        67 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-------~g~~----~~~~~~~~~~~~~D~d~dG~I~~~  135 (143)
T 2obh_A           67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKE-------LGEN----LTDEELQEMIDEADRDGDGEVSEQ  135 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------TTCC----CCHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-------hCCC----CCHHHHHHHHHHhCCCCCCcEeHH
Confidence            8765432 34567899999999 699999999999888764       2432    235556666553     6899999


Q ss_pred             HHHHHH
Q psy4949         158 DFMDTM  163 (275)
Q Consensus       158 eFl~~~  163 (275)
                      ||+..+
T Consensus       136 eF~~~~  141 (143)
T 2obh_A          136 EFLRIM  141 (143)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999976

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.04  E-value=9.3e-10  Score=88.52  Aligned_cols=92  Identities=17%  Similarity=0.304  Sum_probs=72.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc----CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC----SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS  136 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc----~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~  136 (275)
                      +..+|+.+|.+++|.|++.||+.++....    .+...++++.+|+.+ .|++|.|+..||..+++.       +|+   
T Consensus        57 ~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~-------~g~---  126 (161)
T 1dtl_A           57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA-------TGE---  126 (161)
T ss_dssp             HHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTT-------C-----
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-------hCC---
Confidence            35688999999999999999999998876    467889999999999 699999999998765542       232   


Q ss_pred             CCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         137 FSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       137 f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                       ..++..++.+|..     +|.|+.+||+.++.
T Consensus       127 -~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  158 (161)
T 1dtl_A          127 -TITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  158 (161)
T ss_dssp             -CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence             1235556666653     68999999999875

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.04  E-value=3.8e-10  Score=95.15  Aligned_cols=129  Identities=14%  Similarity=0.188  Sum_probs=92.7

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+....+   .+..|+..++..+|..+    .      ..++.++     +..+|+.+|.+++|.|++.||..++
T Consensus        11 ~l~~~F~~~D~d---~dG~I~~~E~~~~l~~~----g------~~~~~~~-----~~~l~~~~D~d~dG~I~~~EF~~~~   72 (188)
T 1s6i_A           11 GLKELFKMIDTD---NSGTITFDELKDGLKRV----G------SELMESE-----IKDLMDAADIDKSGTIDYGEFIAAT   72 (188)
T ss_dssp             SHHHHHHTTSSS---SSSCEEHHHHHHHHTTT----T------CCCCHHH-----HHHHHHHTCTTCSSEECHHHHHHHH
T ss_pred             HHHHHHHHHCCC---CCCcCCHHHHHHHHHHc----C------CCCCHHH-----HHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            455667665533   35678888865555432    1      1122222     4578999999999999999999998


Q ss_pred             HHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHH
Q psy4949          87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFM  160 (275)
Q Consensus        87 s~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl  160 (275)
                      ..+......++++.+|+.+ .|++|.|++.||..+|+.+       |      .++..++.+|.     ++|.|+.+||+
T Consensus        73 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~-------g------~~~~~~~~~~~~~D~d~dG~Is~~EF~  139 (188)
T 1s6i_A           73 VHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF-------G------LDDIHIDDMIKEIDQDNDGQIDYGEFA  139 (188)
T ss_dssp             TTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT-------T------CCTTHHHHHHHHHCSSSSSEEETTHHH
T ss_pred             HHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-------C------CCHHHHHHHHHHHCCCCCCcEeHHHHH
Confidence            8777667778999999999 7999999999998776531       2      12334455554     26899999999


Q ss_pred             HHHhcC
Q psy4949         161 DTMMSE  166 (275)
Q Consensus       161 ~~~~~d  166 (275)
                      .++.+.
T Consensus       140 ~~~~~~  145 (188)
T 1s6i_A          140 AMMRKR  145 (188)
T ss_dssp             HTTSCC
T ss_pred             HHHHHc
Confidence            998754

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.03  E-value=1.2e-09  Score=89.49  Aligned_cols=144  Identities=7%  Similarity=0.055  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCcc-ChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           5 IWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQV-HVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         5 ~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v-~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      +..+-++|+.. ..+   .+..|+..|+..++..+....... |+...+ ....+..-+...+|+.+|.+++|+|++.||
T Consensus         7 ~~~l~~~F~~~~D~d---~dG~i~~~E~~~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef   82 (185)
T 2sas_A            7 KQKIKFTFDFFLDMN---HDGSIQDNDFEDMMTRYKEVNKGS-LSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEY   82 (185)
T ss_dssp             HHHHHHHHHHHTCTT---CSSEECHHHHHHHHHHHHHHHGGG-SCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             HHHHHHHHHHheeCC---CCCeEcHHHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHH
Confidence            34556677766 544   367899999888887765331111 220011 011111222346799999999999999999


Q ss_pred             HHHHHHhcCC---------ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC--
Q psy4949          83 KVALATMCSG---------KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG--  150 (275)
Q Consensus        83 ~~aLs~Lc~G---------~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~--  150 (275)
                      +.++..+...         ...+.++.+|+.+ .|++|.|+..||..+++.       +|      .++..++.+|..  
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~-------~g------~~~~~~~~~~~~~D  149 (185)
T 2sas_A           83 LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN-------FQ------LQCADVPAVYNVIT  149 (185)
T ss_dssp             HHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS-------SC------CCCSSHHHHHHHHH
T ss_pred             HHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH-------hC------CCHHHHHHHHHHhc
Confidence            9999877543         3568889999999 799999999999877653       12      123344444443  


Q ss_pred             ---CCcccHHHHHHHHhc
Q psy4949         151 ---NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 ---d~~Is~~eFl~~~~~  165 (275)
                         +|.|+.+||+.++..
T Consensus       150 ~d~dG~i~~~ef~~~~~~  167 (185)
T 2sas_A          150 DGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             TTTTSCCSHHHHHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHH
Confidence               799999999998753

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.03  E-value=1.1e-09  Score=86.37  Aligned_cols=130  Identities=15%  Similarity=0.218  Sum_probs=89.1

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +-++|+....+   .+..|+..++..+|..+    ..      ..+.++..     .+++.   +++|+|++.+|+.++.
T Consensus         7 l~~~F~~~D~d---~~G~i~~~e~~~~l~~~----~~------~~~~~~~~-----~~~~~---~~~g~i~~~eF~~~~~   65 (145)
T 2bl0_B            7 IQECFQIFDKD---NDGKVSIEELGSALRSL----GK------NPTNAELN-----TIKGQ---LNAKEFDLATFKTVYR   65 (145)
T ss_dssp             HHHHHHHHCTT---CSSCEEGGGHHHHHHHT----TC------CCCHHHHH-----HHHHH---HTSSEECHHHHHHHHT
T ss_pred             HHHHHHHhCCC---CcCccCHHHHHHHHHHh----CC------CCCHHHHH-----HHHHh---cCCCeEcHHHHHHHHH
Confidence            44555555433   35567777755555442    11      12223222     23333   8999999999999988


Q ss_pred             Hh--cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHH
Q psy4949          88 TM--CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDF  159 (275)
Q Consensus        88 ~L--c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eF  159 (275)
                      ..  ......++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .++..++.+|..     +|.|+.+||
T Consensus        66 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-------g~~----~~~~~~~~~~~~~d~~~dg~i~~~eF  134 (145)
T 2bl0_B           66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNL-------GDA----LTSSEVEELMKEVSVSGDGAINYESF  134 (145)
T ss_dssp             SCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHS-------SSC----CCHHHHHHHHTTCCCCTTSEEEHHHH
T ss_pred             HHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc-------CCC----CCHHHHHHHHHHcCCCCCCcEeHHHH
Confidence            66  3456678999999999 6999999999999888752       321    245667777764     689999999


Q ss_pred             HHHHhcCCCC
Q psy4949         160 MDTMMSEPGP  169 (275)
Q Consensus       160 l~~~~~d~~P  169 (275)
                      +..+.+..+|
T Consensus       135 ~~~~~~~~~~  144 (145)
T 2bl0_B          135 VDMLVTGYPL  144 (145)
T ss_dssp             HHHHHHSSCC
T ss_pred             HHHHHhcCCC
Confidence            9999876544

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.02  E-value=3.2e-10  Score=95.66  Aligned_cols=123  Identities=16%  Similarity=0.240  Sum_probs=85.1

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHH-------HHHHHHHhhcCCCCCeeehHHHHHHHHHhc-----------------
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGL-------LLNWLLSAYSVESLGRIRVFSIKVALATMC-----------------   90 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l-------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-----------------   90 (275)
                      |..+|..+-++  ..|.|+.++....       .+..+|+.+|.+++|.|++.||+.++....                 
T Consensus        31 l~~~F~~~D~d--~dG~I~~~El~~~~~lg~~~~~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~  108 (202)
T 2bec_A           31 LHHRFRALDRN--KKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEP  108 (202)
T ss_dssp             HHHHHHHHCSS--CSSCCCHHHHHTCHHHHHSTTHHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCC
T ss_pred             HHHHHHHHCCC--CCCCcCHHHHHHHHhcCCCccHHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccc
Confidence            44445444333  1245665554332       145789999999999999999999998887                 


Q ss_pred             CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .....++++.+|+.+ .|++|.|++.||..+|+.+      .|+..+-...+..++.+|.     ++|.|+.+||+.++.
T Consensus       109 ~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~------~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  182 (202)
T 2bec_A          109 LNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM------VGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLE  182 (202)
T ss_dssp             TTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS------CCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTT
T ss_pred             cccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh------cCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence            467789999999999 6999999999999888753      1321110001223344322     268999999999885


Q ss_pred             c
Q psy4949         165 S  165 (275)
Q Consensus       165 ~  165 (275)
                      +
T Consensus       183 ~  183 (202)
T 2bec_A          183 K  183 (202)
T ss_dssp             T
T ss_pred             H
Confidence            4

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.02  E-value=2.8e-09  Score=88.59  Aligned_cols=137  Identities=9%  Similarity=0.023  Sum_probs=97.5

Q ss_pred             HHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH------HHHHHHHhhcCCCCCeee
Q psy4949           6 WNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL------LLNWLLSAYSVESLGRIR   78 (275)
Q Consensus         6 ~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l------~~~~lf~~fD~~~~G~I~   78 (275)
                      ..+-++|+.. ..+   .+..|+..|+..++..+......      ..+.++...+      +...+++.+|.|++|+|+
T Consensus        12 ~~l~~~F~~~~D~d---~dG~i~~~E~~~~l~~~~~~~g~------~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A           12 NKILRVFNTFYDCN---HDGVIEWDDFELAIKKICNLHSW------PTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             HHHHHHHHHHTCTT---CSSEECHHHHHHHHHHHHHHHTC------CTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             HHHHHhccccccCC---CCCeeeHHHHHHHHHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            3455677766 544   36789999988888777644221      1122222222      234567999999999999


Q ss_pred             hHHHHHHHHHhcC---------CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh
Q psy4949          79 VFSIKVALATMCS---------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF  148 (275)
Q Consensus        79 ~~ef~~aLs~Lc~---------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF  148 (275)
                      +.||+.++..+..         ....+.++.+|+.+ .|++|.|+..||..+++.+       |      .++..++.+|
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~-------g------~~~~~~~~~~  149 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY-------G------IPKSDCDAAF  149 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTT-------T------CCHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------C------CCHHHHHHHH
Confidence            9999999887642         34567889999999 7999999999998887642       2      2345566666


Q ss_pred             cC-----CCcccHHHHHHHHh
Q psy4949         149 SG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       149 ~~-----d~~Is~~eFl~~~~  164 (275)
                      ..     +|.|+.+||+..+.
T Consensus       150 ~~~D~d~dG~i~~~Ef~~~~~  170 (191)
T 2ccm_A          150 DTLSDGGKTMVTREIFARLWT  170 (191)
T ss_dssp             HHHTTTTTSCCBHHHHHHHHH
T ss_pred             HHhCCCCCCCcCHHHHHHHHH
Confidence            53     68999999998775

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.00  E-value=5e-09  Score=83.77  Aligned_cols=132  Identities=20%  Similarity=0.276  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+...-+   .+..|+..++..+|+.+-    .. |     +.++     +..+++.+|.+++|.|++.+|..
T Consensus         9 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~g----~~-~-----~~~~-----~~~l~~~~d~~~~g~i~~~eF~~   70 (148)
T 1exr_A            9 IAEFKEAFALFDKD---GDGTITTKELGTVMRSLG----QN-P-----TEAE-----LQDMINEVDADGNGTIDFPEFLS   70 (148)
T ss_dssp             HHHHHHHHHHHCTT---CSSEECHHHHHHHHHHHT----CC-C-----CHHH-----HHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcCcHHHHHHHHHHcC----CC-C-----CHHH-----HHHHHHHHCCCCCCcCcHHHHHH
Confidence            34455677665543   356788889766665431    11 2     2222     35678999999999999999998


Q ss_pred             HHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHH
Q psy4949          85 ALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVN  157 (275)
Q Consensus        85 aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~  157 (275)
                      .+.... .....++++.+|+.+ .|++|.|++.+|..+|+.+       |+.    -++..++.+|.     ++|.|+.+
T Consensus        71 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~d~d~dg~i~~~  139 (148)
T 1exr_A           71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-------GEK----LTDDEVDEMIREADIDGDGHINYE  139 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-------TCC----CCHHHHHHHHHHHCSSSSSSBCHH
T ss_pred             HHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------CCC----CCHHHHHHHHHHhCCCCCCcEeHH
Confidence            876543 345567899999999 6999999999998888752       321    23455555554     36899999


Q ss_pred             HHHHHHhc
Q psy4949         158 DFMDTMMS  165 (275)
Q Consensus       158 eFl~~~~~  165 (275)
                      ||+..+.+
T Consensus       140 eF~~~~~~  147 (148)
T 1exr_A          140 EFVRMMVS  147 (148)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHcc
Confidence            99998753

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.00  E-value=6.6e-09  Score=86.25  Aligned_cols=141  Identities=11%  Similarity=0.105  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHH-HHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSS-LYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~-lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      +..+-++|+....+   .+..|+..|+...+.. +...+.      ...+..+.....+..+|+.+|.+++|.|++.||+
T Consensus        19 ~~~l~~~F~~~D~d---~~G~i~~~El~~~~~~~~l~~~g------~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~   89 (195)
T 1qv0_A           19 IKRHKHMFDFLDIN---GNGKITLDEIVSKASDDICAKLE------ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFL   89 (195)
T ss_dssp             HHHHHHHHHHHCTT---CSSCBCHHHHHHHHHHTHHHHTT------CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHH
T ss_pred             HHHHHHHHhHcCCC---CCCcCcHHHHHHHHHHHHHHHcC------CCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHH
Confidence            34455666655433   3566888886543332 332221      1112222223346789999999999999999999


Q ss_pred             HHHHHhcCC-------ChhhHHH----Hhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-
Q psy4949          84 VALATMCSG-------KLMDKLR----YIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-  150 (275)
Q Consensus        84 ~aLs~Lc~G-------~l~dKlr----~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-  150 (275)
                      .++..+..+       .-.+.++    .+|+.+ .|++|.|++.||..+++.+       |+.    .++..++.+|.. 
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~~----~~~~~~~~~~~~~  158 (195)
T 1qv0_A           90 DGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-------GIS----PSQEDCEATFRHC  158 (195)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH-------SSC----CCHHHHHHHHHHS
T ss_pred             HHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh-------CCC----CCHHHHHHHHHHh
Confidence            988876542       2223454    999999 6999999999999988753       322    235556666653 


Q ss_pred             ----CCcccHHHHHHHHhc
Q psy4949         151 ----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 ----d~~Is~~eFl~~~~~  165 (275)
                          +|.|+.+||+..+..
T Consensus       159 D~d~dg~i~~~eF~~~~~~  177 (195)
T 1qv0_A          159 DLDNAGDLDVDEMTRQHLG  177 (195)
T ss_dssp             CCCTTSCEEHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHH
Confidence                689999999987753

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.99  E-value=2.6e-09  Score=85.17  Aligned_cols=133  Identities=15%  Similarity=0.275  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+-++|+....+   .+..|+..++ .       .+....     .++      .+.-+|+.+|.+++|+|++.+|+.
T Consensus         5 ~~~l~~~F~~~D~d---~~G~i~~~el-~-------~l~~~~-----~~~------~~~~~~~~~D~~~~g~i~~~ef~~   62 (155)
T 3ll8_B            5 IKRLGKRFKKLDLD---NSGSLSVEEF-M-------SLPELQ-----QNP------LVQRVIDIFDTDGNGEVDFKEFIE   62 (155)
T ss_dssp             HHHHHHHHHHHCTT---CSSSBCHHHH-T-------TSGGGT-----TCT------THHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHHHHHHHhCcC---CCCeEcHHHH-H-------Hhhccc-----cch------HHHHHHHHHCCCCCCcCcHHHHHH
Confidence            44556667666543   3567888885 1       111111     111      245688999999999999999999


Q ss_pred             HHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHH
Q psy4949          85 ALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVN  157 (275)
Q Consensus        85 aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~  157 (275)
                      ++..+. .+...++++.+|+.+ .|++|.|++.||..+++.+...+      .+-...+..++.+|.     ++|.|+.+
T Consensus        63 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~D~~~dg~i~~~  136 (155)
T 3ll8_B           63 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN------LKDTQLQQIVDKTIINADKDGDGRISFE  136 (155)
T ss_dssp             HHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGG------SCHHHHHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccC------CCHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            998765 568889999999999 79999999999999988743221      110001334555432     26899999


Q ss_pred             HHHHHHhc
Q psy4949         158 DFMDTMMS  165 (275)
Q Consensus       158 eFl~~~~~  165 (275)
                      ||+.++.+
T Consensus       137 eF~~~~~~  144 (155)
T 3ll8_B          137 EFCAVVGG  144 (155)
T ss_dssp             HHHHHHGG
T ss_pred             HHHHHHhc
Confidence            99999865

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.98  E-value=2.4e-09  Score=102.32  Aligned_cols=140  Identities=11%  Similarity=0.124  Sum_probs=99.5

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+....+   .+..|+..|+...+..+...+-.. |+  ..+ ....+-.+..+|+.||.|++|.|++.||+.+
T Consensus       335 ~~l~~~F~~~D~d---~dG~I~~~El~~~l~~~~~~~g~~-~~--~~~-~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~  407 (484)
T 3nyv_A          335 KELTAIFHKMDKN---GDGQLDRAELIEGYKELMRMKGQD-AS--MLD-ASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV  407 (484)
T ss_dssp             HHHHHHHHHHCTT---CSSEEEHHHHHHHHHHHHC----C-GG--GCS-HHHHHHHHHHHHHHHTCCTTSEEEHHHHHHH
T ss_pred             HHHHHHHHHhCcC---CCceEeHHHHHHHHHHHhhhcccc-cc--ccc-ccccHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            3455666666544   356788888766666655443221 11  112 1223344568999999999999999999999


Q ss_pred             HHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHH
Q psy4949          86 LATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDF  159 (275)
Q Consensus        86 Ls~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eF  159 (275)
                      +........+++++.+|+.+ .|+||.|+.+||..+|..             .+.+++.++.+|..     ||.|+.+||
T Consensus       408 ~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-------------~~~~~~~~~~~~~~~D~d~dG~i~~~Ef  474 (484)
T 3nyv_A          408 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV-------------SDVDSETWKSVLSEVDKNNDGEVDFDEF  474 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH-------------TTCCHHHHHHHHHHHCTTCCSEEEHHHH
T ss_pred             HHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------------cCCCHHHHHHHHHHhcCCCCCcCCHHHH
Confidence            98876667778999999999 699999999999888764             11245566666653     789999999


Q ss_pred             HHHHhc
Q psy4949         160 MDTMMS  165 (275)
Q Consensus       160 l~~~~~  165 (275)
                      +..+.+
T Consensus       475 ~~~~~~  480 (484)
T 3nyv_A          475 QQMLLK  480 (484)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998864

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.97  E-value=4e-09  Score=83.13  Aligned_cols=131  Identities=18%  Similarity=0.229  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+-++|+....+   .+..|+..++..+|..    +..      ..+.++     +..+++.+|.+++|.|++.+|+.
T Consensus        10 ~~~l~~~F~~~D~~---~~G~i~~~e~~~~l~~----~~~------~~~~~~-----~~~l~~~~d~~~~g~i~~~ef~~   71 (147)
T 4ds7_A           10 IAEFKEAFALFDKD---NSGSISASELATVMRS----LGL------SPSEAE-----VADLMNEIDVDGNHAIEFSEFLA   71 (147)
T ss_dssp             HHHHHHHHHHHCTT---CSSEEEHHHHHHHHHH----TTC------CCCHHH-----HHHHHHHHCTTSSSEEEHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCCcCHHHHHHHHHH----hCC------CCCHHH-----HHHHHHHhccCCCCcCcHHHHHH
Confidence            34455666665533   3456777775554433    111      112222     45788999999999999999999


Q ss_pred             HHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHHH
Q psy4949          85 ALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVND  158 (275)
Q Consensus        85 aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~e  158 (275)
                      ++..+.. ....++++.+|+.+ .|++|.|++++|..+++.+       |..    .+++.++.+|    .++|.|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------~~~----~~~~~~~~~~~~~d~~dg~i~~~e  140 (147)
T 4ds7_A           72 LMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-------GEK----LTDAEVDEMLREVSDGSGEINIKQ  140 (147)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TCC----CCHHHHHHHHHHHSSSCSSEEHHH
T ss_pred             HHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhcCCCCcCcHHH
Confidence            9976543 45668899999999 7999999999999888753       221    1333333333    3479999999


Q ss_pred             HHHHHh
Q psy4949         159 FMDTMM  164 (275)
Q Consensus       159 Fl~~~~  164 (275)
                      |+.++.
T Consensus       141 F~~~l~  146 (147)
T 4ds7_A          141 FAALLS  146 (147)
T ss_dssp             HHHHTT
T ss_pred             HHHHHh
Confidence            999874

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.96  E-value=5.7e-09  Score=86.17  Aligned_cols=141  Identities=12%  Similarity=0.085  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHH-HHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSS-LYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~-lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      +..+.++|+....+   .+..|+..|+...+.. +...+    .  ...+..+.....+..+++.+|.+++|+|++.||+
T Consensus        15 ~~~l~~~F~~~D~d---~~G~i~~~El~~~~~~~~l~~~----g--~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~   85 (191)
T 1uhk_A           15 IGRHKHMFNFLDVN---HNGKISLDEMVYKASDIVINNL----G--ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYI   85 (191)
T ss_dssp             HHHHHHHHHHHCTT---CCSEEEHHHHHHHHHHHHHHTS----C--CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHH
T ss_pred             HHHHHHHHhhccCC---CCCcCcHHHHHHHHHHHHHHHc----C--CCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHH
Confidence            34455677666543   3567888886643332 22211    1  1112222222246789999999999999999999


Q ss_pred             HHHHHhcC-------CChhhHHH----Hhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-
Q psy4949          84 VALATMCS-------GKLMDKLR----YIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-  150 (275)
Q Consensus        84 ~aLs~Lc~-------G~l~dKlr----~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-  150 (275)
                      ..+..+..       ....+.++    .+|+.+ .|++|.|++.||..+++.+       |+.    .+++.++.+|.. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-------g~~----~~~~~~~~~~~~~  154 (191)
T 1uhk_A           86 EGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA-------GII----QSSEDCEETFRVC  154 (191)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------TSC----CSHHHHHHHHHHS
T ss_pred             HHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh-------CCC----CCHHHHHHHHHHh
Confidence            98887654       23334455    899999 7999999999999888753       321    234556666653 


Q ss_pred             ----CCcccHHHHHHHHhc
Q psy4949         151 ----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 ----d~~Is~~eFl~~~~~  165 (275)
                          +|.|+.+||+..+..
T Consensus       155 D~d~dG~i~~~eF~~~~~~  173 (191)
T 1uhk_A          155 DIDESGQLDVDEMTRQHLG  173 (191)
T ss_dssp             CCCTTSCEEHHHHHHHHHH
T ss_pred             CCCCCCcCcHHHHHHHHHH
Confidence                689999999998754

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=98.96  E-value=3.9e-09  Score=100.98  Aligned_cols=92  Identities=18%  Similarity=0.300  Sum_probs=70.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      .-+|+.+|.|++|.|++.||+.+++..... ..+++++.+|+.+ .|++|.|+++||..+|+.+       |+.    -+
T Consensus       341 ~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-------Ge~----LS  409 (440)
T 3u0k_A          341 QDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-------GEK----LT  409 (440)
T ss_dssp             HHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------TCC----CC
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-------CCC----CC
Confidence            457899999999999999999988765543 4678999999999 6999999999999888764       332    23


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++.++.+|..     ||.|+.+||++.+++
T Consensus       410 deEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          410 DEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence            4555555543     689999999998754

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.96  E-value=5.9e-09  Score=84.82  Aligned_cols=139  Identities=10%  Similarity=0.161  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccC-hHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVH-VEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~-~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      +..+-++|+....+   .+..|+..|+..+|..+...+.. -|+  .-. +.+...-....+++.+|  ++|+|++.||+
T Consensus         5 ~~~l~~~F~~~D~d---~~G~i~~~El~~~l~~~~~~~g~-~~~--~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~   76 (174)
T 1q80_A            5 VQKMKTYFNRIDFD---KDGAITRMDFESMAERFAKESEM-KAE--HAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFI   76 (174)
T ss_dssp             HHHHHHHHHHHCTT---CSSEESHHHHHHHHHHHHHHSSC-CTT--HHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHH
T ss_pred             HHHHHHHHHhcCCC---CCCcEeHHHHHHHHHHHHHHhCC-CCC--cHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHH
Confidence            44566777776544   36789999977777765422111 121  000 11111222345788999  99999999999


Q ss_pred             HHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCC
Q psy4949          84 VALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNG  152 (275)
Q Consensus        84 ~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~  152 (275)
                      .++..+..     +...++++.+|+.+ .|++|.|++.||..+++.+ .+            ++..++.+|.     ++|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g~------------~~~~~~~~~~~~D~d~dg  143 (174)
T 1q80_A           77 NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-GL------------DKTMAPASFDAIDTNNDG  143 (174)
T ss_dssp             HHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-TC------------CGGGHHHHHHHHCTTCSS
T ss_pred             HHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-CC------------CHHHHHHHHHHhCCCCCc
Confidence            99998876     23568899999999 7999999999999998875 11            2334555554     368


Q ss_pred             cccHHHHHHHHh
Q psy4949         153 KVTVNDFMDTMM  164 (275)
Q Consensus       153 ~Is~~eFl~~~~  164 (275)
                      .|+.+||+..+.
T Consensus       144 ~i~~~ef~~~~~  155 (174)
T 1q80_A          144 LLSLEEFVIAGS  155 (174)
T ss_dssp             SBCHHHHHHHHH
T ss_pred             eEeHHHHHHHHH
Confidence            999999999874

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.96  E-value=4.2e-09  Score=86.45  Aligned_cols=133  Identities=19%  Similarity=0.260  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+....+   .+..|+..++..+|..+    ..      ..+.++     +..+|+.||.+++|.|++.||..
T Consensus        10 ~~~l~~~F~~~D~d---~~G~i~~~e~~~~l~~~----~~------~~~~~~-----~~~l~~~~D~~~~g~i~~~EF~~   71 (179)
T 2f2o_A           10 IAEFKEAFSLFDKD---GDGTITTKELGTVMRSL----GQ------NPTEAE-----LQDMINEVDADGNGTIDFPEFLT   71 (179)
T ss_dssp             HHHHHHHHHHHCTT---CSSCBCHHHHHHHHHHT----TC------CCCHHH-----HHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcCcHHHHHHHHHHc----CC------CCCHHH-----HHHHHHHhccCCCCCCcHHHHHH
Confidence            44556667666544   35678888866665542    11      112222     45788999999999999999999


Q ss_pred             HHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHH
Q psy4949          85 ALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVN  157 (275)
Q Consensus        85 aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~  157 (275)
                      ++..... ....++++.+|+.+ .|++|.|++.||..+++.+       |+    ..++..++.+|..     +|.|+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~-------g~----~~~~~~~~~~~~~~D~~~dg~i~~~  140 (179)
T 2f2o_A           72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-------GE----KLTDEEVDEMIREADIDGDGQVNYE  140 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC-------------CCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHcCCCCCCcCcHH
Confidence            9876643 34667899999999 7999999999999888753       22    1234555666553     6899999


Q ss_pred             HHHHHHhcC
Q psy4949         158 DFMDTMMSE  166 (275)
Q Consensus       158 eFl~~~~~d  166 (275)
                      ||+.++...
T Consensus       141 eF~~~~~~~  149 (179)
T 2f2o_A          141 EFVQMMTAK  149 (179)
T ss_dssp             HHHHHSCC-
T ss_pred             HHHHHHHHc
Confidence            999998654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.95  E-value=6.4e-10  Score=106.65  Aligned_cols=146  Identities=12%  Similarity=0.095  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+-++|+....+   .+..|+..|+...+..++..+... |+...-+.....+-.+..+|+.||.|++|.|++.||+.
T Consensus       330 ~~~l~~~F~~~D~d---~dG~I~~~El~~~l~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~  405 (486)
T 3mwu_A          330 TKQLTEIFRKLDTN---NDGMLDRDELVRGYHEFMRLKGVD-SNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIA  405 (486)
T ss_dssp             HHHHHHHHHHHCTT---CSSSBCHHHHHHHHHHHHHHHTCC-GGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCceeeHHHHHHHHHHhhhhhccc-chhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence            34556677766654   367788889888887777654322 11000000011233457889999999999999999999


Q ss_pred             HHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHH
Q psy4949          85 ALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVND  158 (275)
Q Consensus        85 aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~e  158 (275)
                      ++.........++++.+|+.+ .|++|.|+++||..+++.+       |+.    .+++.++.+|..     ||.|+.+|
T Consensus       406 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-------g~~----~~~~~~~~~~~~~D~d~dG~I~~~E  474 (486)
T 3mwu_A          406 SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA-------DSS----IQMEELESIIEQVDNNKDGEVDFNE  474 (486)
T ss_dssp             HHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC-------------------------------CCCCSSCSSSBCHHH
T ss_pred             HHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            887777777889999999999 6999999999998877643       221    124456666654     68999999


Q ss_pred             HHHHHhc
Q psy4949         159 FMDTMMS  165 (275)
Q Consensus       159 Fl~~~~~  165 (275)
                      |+..+.+
T Consensus       475 F~~~~~~  481 (486)
T 3mwu_A          475 FVEMLQN  481 (486)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998753

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.95  E-value=9.5e-10  Score=92.21  Aligned_cols=99  Identities=16%  Similarity=0.160  Sum_probs=74.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchh-hccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPA-AVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~-~~gE~~~f~~  139 (275)
                      +..+|+.||.+++|.|++.||..++.........+.++.+|+.+ .|++|.|+..||..+++.+ ..|. ..|+    ..
T Consensus        75 ~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~~~~~~~~~----~~  149 (204)
T 3e3r_A           75 AEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGR-AHPKVRSGE----WT  149 (204)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCT-TCHHHHTTS----SC
T ss_pred             HHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccc-cCCccccCC----CC
Confidence            45789999999999999999999988777777788999999999 7999999999998776532 1111 1222    11


Q ss_pred             chHHHhhhh------cCCCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIF------SGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF------~~d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|      .++|.|+.+||+.++..
T Consensus       150 ~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~  181 (204)
T 3e3r_A          150 EDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG  181 (204)
T ss_dssp             HHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence            244455544      34689999999998854

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.95  E-value=2.8e-08  Score=78.39  Aligned_cols=131  Identities=15%  Similarity=0.162  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhh---cCCCCCeeehHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAY---SVESLGRIRVFS   81 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~f---D~~~~G~I~~~e   81 (275)
                      +..+-++|+...-+   .+..|+..++..+|..+-    .      .++.++     +..+++.+   |.++ |.|++.+
T Consensus         7 ~~~l~~~F~~~D~~---~~G~i~~~el~~~l~~~~----~------~~~~~~-----~~~l~~~~~~~d~~~-g~i~~~e   67 (149)
T 2mys_C            7 ADDFKEAFLLFDRT---GDAKITASQVGDIARALG----Q------NPTNAE-----INKILGNPSKEEMNA-AAITFEE   67 (149)
T ss_pred             HHHHHHHHHHhCCC---CCCcCcHHHHHHHHHHhC----C------CCCHHH-----HHHHHHHhhhccccC-CcCcHHH
Confidence            34455677665543   356799999777665541    1      112222     34677888   9999 9999999


Q ss_pred             HHHHHHHh---cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc----CCCc
Q psy4949          82 IKVALATM---CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS----GNGK  153 (275)
Q Consensus        82 f~~aLs~L---c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~----~d~~  153 (275)
                      |+..+...   ......++++.+|+.+ .|++|.|+..+|..+|+.+       |+.    .+++.++.+|.    ++|.
T Consensus        68 F~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~~----~~~~~~~~~~~~d~~~dg~  136 (149)
T 2mys_C           68 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-------GEK----MTEEEVEELMKGQEDSNGC  136 (149)
T ss_pred             HHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh-------CCC----CCHHHHHHHHhhCCCCCCc
Confidence            99999875   4567788999999999 6999999999999888753       321    23444555554    3689


Q ss_pred             ccHHHHHHHHhc
Q psy4949         154 VTVNDFMDTMMS  165 (275)
Q Consensus       154 Is~~eFl~~~~~  165 (275)
                      |+.+||+.++.+
T Consensus       137 i~~~eF~~~~~~  148 (149)
T 2mys_C          137 INYEAFVKHIMS  148 (149)
T ss_pred             EeHHHHHHHHhc
Confidence            999999998753

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.94  E-value=3.4e-09  Score=92.41  Aligned_cols=143  Identities=13%  Similarity=0.250  Sum_probs=96.2

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +.++|+....+   .+..|+..++..++..++....      ..++.++. .-++.-+|+.+|.+++|.|++.||+..+.
T Consensus       106 l~~~F~~~D~d---~~G~i~~~e~~~~l~~~~~~~g------~~~~~~~~-~~~~~~~~~~~D~~~dg~i~~~ef~~~~~  175 (272)
T 2be4_A          106 FMKIWRKYDAD---SSGYISAAELKNFLKDLFLQHK------KKIPPNKL-DEYTDAMMKIFDKNKDGRLDLNDLARILA  175 (272)
T ss_dssp             HHHHHHHHCTT---CCSEEEGGGHHHHHHHHHHHTT------CCCCHHHH-HHHHHHHHHHHCSSCSSEEEHHHHGGGSC
T ss_pred             HHHHHHHhCCC---CCCccCHHHHHHHHHHHHHhcC------CCCCHHHH-HHHHHHHHHHhccCCCCcCcHHHHHHHHh
Confidence            44566655433   3567888887777777654321      12233333 33455699999999999999999988765


Q ss_pred             H-----hcCC-------ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHH----HhhhhcC
Q psy4949          88 T-----MCSG-------KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTL----AQEIFSG  150 (275)
Q Consensus        88 ~-----Lc~G-------~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~----v~~cF~~  150 (275)
                      .     ++.+       ...++++.+|+.+ .|++|.|++.||..+|+.+....   +  +.  .++..    ++.+|..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~---~--~~--~~~~~~~~~~~~l~~~  248 (272)
T 2be4_A          176 LQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELV---R--PS--ISGGDLDKFRECLLTH  248 (272)
T ss_dssp             CSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHH---S--SS--CCHHHHHHHHHHHHHH
T ss_pred             hhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHc---C--CC--CCHHHHHHHHHHHHHH
Confidence            3     2221       3457789999999 69999999999999998764311   1  11  12222    3336653


Q ss_pred             -----CCcccHHHHHHHHhcCC
Q psy4949         151 -----NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus       151 -----d~~Is~~eFl~~~~~d~  167 (275)
                           ||.|+.+||+.++...|
T Consensus       249 ~D~d~dG~is~~EF~~~~~~~p  270 (272)
T 2be4_A          249 CDMNKDGKIQKSELALCLGLKH  270 (272)
T ss_dssp             HCCSTTCEEEHHHHHHHTTCCC
T ss_pred             hCCCCCCcCcHHHHHHHHccCC
Confidence                 68999999999987654

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.93  E-value=8.1e-09  Score=86.99  Aligned_cols=94  Identities=14%  Similarity=0.211  Sum_probs=71.0

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +..+|+.+|.+++|.|++.||+.++.... ....++++.+|+.+ .|++|.|+++||..+++..     ..++.  ....
T Consensus        89 ~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-----~~~~~--l~~~  160 (191)
T 3k21_A           89 FDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNG-----NKKGN--ITQR  160 (191)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHS-----SSCSC--CCHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc-----CCCCC--CCHh
Confidence            35689999999999999999999875444 35678999999999 6999999999999888641     11111  1111


Q ss_pred             -hHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949         141 -DTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus       141 -e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                       .+.++.+|..     ||.|+.+||+..+
T Consensus       161 ~~~~~~~~~~~~D~d~dG~Is~~EF~~~~  189 (191)
T 3k21_A          161 DVNRVKRMIRDVDKNNDGKIDFHEFSEMM  189 (191)
T ss_dssp             HHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCeECHHHHHHHH
Confidence             1346666653     7899999999976

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.93  E-value=1.1e-09  Score=88.80  Aligned_cols=91  Identities=19%  Similarity=0.235  Sum_probs=69.0

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +..+|+.+|.+++|.|++.+|..++..+......++++.+|+.+ .|++|.|+..+|..+++.+       |      .+
T Consensus        65 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------~------~~  131 (166)
T 2aao_A           65 ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF-------G------VE  131 (166)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-----------------
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------C------CC
Confidence            45789999999999999999999987666556678899999999 6999999999998877642       1      11


Q ss_pred             hHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      +..++.+|.     ++|.|+.+||+.++.+
T Consensus       132 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A          132 DVRIEELMRDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             ----CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            223333443     3689999999998854

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.93  E-value=2.6e-09  Score=93.10  Aligned_cols=151  Identities=12%  Similarity=0.208  Sum_probs=105.4

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      ++..+-++|+....+   .+..|+..|+..+|..++..+...    ..++.++ +..+..-+|+.+|.+++|.|++.||.
T Consensus         9 ~~~~l~~~F~~~D~d---~~G~i~~~El~~~l~~~~~~lg~~----~~~~~~~-~~~~~~~~f~~~D~d~~g~i~~~Ef~   80 (272)
T 2be4_A            9 DAAGFLQIWQHFDAD---DNGYIEGKELDDFFRHMLKKLQPK----DKITDER-VQQIKKSFMSAYDATFDGRLQIEELA   80 (272)
T ss_dssp             CHHHHHHHHHHHCTT---CCSEEEGGGHHHHHHHHHHHHSTT----SCCCHHH-HHHHHHHHSCHHHHTCCSEEEHHHHH
T ss_pred             CHHHHHHHHHHhcCC---CCCCcCHHHHHHHHHHHHHhcCCC----CCCCHHH-HHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence            456677888877644   467899999888888766655431    0123333 34445567899999999999999999


Q ss_pred             HH-----------HHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-
Q psy4949          84 VA-----------LATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-  150 (275)
Q Consensus        84 ~a-----------Ls~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-  150 (275)
                      .+           +..+......++++.+|+.+ .|++|.|++.||..+|+.+...   .|...+....+..++.+|.. 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~---~g~~~~~~~~~~~~~~~~~~~  157 (272)
T 2be4_A           81 NMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQ---HKKKIPPNKLDEYTDAMMKIF  157 (272)
T ss_dssp             HHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHh
Confidence            98           55566677788999999999 6999999999999999876421   12211100001223445542 


Q ss_pred             ----CCcccHHHHHHHHhc
Q psy4949         151 ----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 ----d~~Is~~eFl~~~~~  165 (275)
                          +|.|+.+||+.++..
T Consensus       158 D~~~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          158 DKNKDGRLDLNDLARILAL  176 (272)
T ss_dssp             CSSCSSEEEHHHHGGGSCC
T ss_pred             ccCCCCcCcHHHHHHHHhh
Confidence                689999999998744

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.92  E-value=4.6e-09  Score=88.29  Aligned_cols=123  Identities=12%  Similarity=0.145  Sum_probs=85.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHH
Q psy4949          21 ELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRY  100 (275)
Q Consensus        21 ~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~  100 (275)
                      +.+..|+..||..+|+.+..+-   .+ +...+.++     +.-+++.+|.+++|+|+|.||+..+..+      ++++.
T Consensus        16 ~~dG~I~~~EL~~~l~~l~~~~---~~-g~~~~~~~-----~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~   80 (174)
T 2i7a_A           16 PRGSDIDATQLQGLLNQELLTG---PP-GDMFSLDE-----CRSLVALMELKVNGRLDQEEFARLWKRL------VHYQH   80 (174)
T ss_dssp             C-CCCEEHHHHHHHHHHHHC---------CCCCHHH-----HHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHH
T ss_pred             CCCCcCCHHHHHHHHHHHHhcc---CC-CCCCCHHH-----HHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHH
Confidence            4578899999888887765321   01 11233333     3467889999999999999999887754      78999


Q ss_pred             hchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHHHHHHHHhc
Q psy4949         101 IFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       101 ~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~eFl~~~~~  165 (275)
                      +|+++.|++|.|+..||..+|+.+..+   .|..    .+++.++.++    .++|.|+.+||+..+..
T Consensus        81 aF~~fDd~~G~I~~~El~~~l~~l~~~---~G~~----~~~~~~~~l~~~~dd~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           81 VFQKVQTSPGVLLSSDLWKAIENTDFL---RGIF----ISRELLHLVTLRYSDSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             HHHHHCSBTTBEEGGGHHHHHHTCGGG---TTCC----CCHHHHHHHHHHHSCTTSEECHHHHHHHHHH
T ss_pred             HHHHhcCCCCcCCHHHHHHHHHHhHhc---cCCC----CCHHHHHHHHHHHcCCCCeEcHHHHHHHHHH
Confidence            999998888999999998888753221   1322    2333333333    34789999999998754

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.92  E-value=6.1e-09  Score=86.54  Aligned_cols=90  Identities=18%  Similarity=0.258  Sum_probs=69.5

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +..+|+.+|.+++|.|++.||+.++..+... ..++++.+|+.+ .|++|.|++.||..+++.         +    +-+
T Consensus        75 ~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~---------~----~~~  140 (180)
T 3mse_B           75 INRILQALDINDRGNITYTEFMAGCYRWKNI-ESTFLKAAFNKIDKDEDGYISKSDIVSLVHD---------K----VLD  140 (180)
T ss_dssp             HHHHHHHHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTTT---------S----SCC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHhcccC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHcC---------C----CCC
Confidence            4578999999999999999999888765543 358999999999 699999999999877651         1    223


Q ss_pred             hHHHhhhhcC-----C--------CcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----N--------GKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d--------~~Is~~eFl~~~~~  165 (275)
                      +..++.+|..     +        |.|+.+||+.++.+
T Consensus       141 ~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          141 NNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             HHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            4555555553     4        89999999998853

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.92  E-value=6.9e-09  Score=83.25  Aligned_cols=131  Identities=17%  Similarity=0.250  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+....+   .+..|+..++..+|..+    ..      .++.++     +..+|+.+|.+++|.|++.+|+.
T Consensus        19 ~~~l~~~F~~~D~d---~~G~i~~~e~~~~l~~~----~~------~~~~~~-----~~~~~~~~d~~~~g~i~~~ef~~   80 (162)
T 1top_A           19 IAEFKAAFDMFDAD---GGGDISTKELGTVMRML----GQ------NPTKEE-----LDAIIEEVDEDGSGTIDFEEFLV   80 (162)
T ss_dssp             HHHHHHHHHTTTCS---CSSEEEGGGHHHHHHHT----TC------CCCHHH-----HHHHHHHHCTTSCCEEEHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcCCHHHHHHHHHHc----CC------CCCHHH-----HHHHHHHHcCCCCCcEeHHHHHH
Confidence            34455666655433   35567777755555432    11      112222     35688999999999999999999


Q ss_pred             HHHHhcCCC----hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcc
Q psy4949          85 ALATMCSGK----LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKV  154 (275)
Q Consensus        85 aLs~Lc~G~----l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~I  154 (275)
                      ++.......    ..++++.+|+.+ .|++|.|++.+|..+|+.+       |+    ..++..++.+|..     +|.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-------g~----~~~~~~~~~~~~~~d~~~dg~i  149 (162)
T 1top_A           81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-------GE----HVTEEDIEDLMKDSDKNNDGRI  149 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-------TC----CCCHHHHHHHHHHHCTTCSSSB
T ss_pred             HHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCcC
Confidence            988765332    578899999999 6999999999998887642       22    1234555555543     6899


Q ss_pred             cHHHHHHHHh
Q psy4949         155 TVNDFMDTMM  164 (275)
Q Consensus       155 s~~eFl~~~~  164 (275)
                      +.+||+..+.
T Consensus       150 ~~~eF~~~~~  159 (162)
T 1top_A          150 DFDEFLKMME  159 (162)
T ss_dssp             CHHHHHHHHH
T ss_pred             cHHHHHHHHh
Confidence            9999999875

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.91  E-value=1.4e-08  Score=83.86  Aligned_cols=90  Identities=20%  Similarity=0.279  Sum_probs=70.4

Q ss_pred             hcCCCCCeeehHHHHHHHHHhcC---CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHH
Q psy4949          69 YSVESLGRIRVFSIKVALATMCS---GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLA  144 (275)
Q Consensus        69 fD~~~~G~I~~~ef~~aLs~Lc~---G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v  144 (275)
                      .|.+++|.|+|.+|+..+.-+..   +...+.++.+|+.+ .|++|.|+..+|..+|+.       +|+..    +++.+
T Consensus        55 ~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~-------~g~~l----s~~e~  123 (159)
T 3i5g_C           55 TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKM-------LGERI----TEDQC  123 (159)
T ss_dssp             CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHH-------SSSCC----CHHHH
T ss_pred             ccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHH-------hCCCC----CHHHH
Confidence            47888999999999998877664   45678899999999 799999999999888764       34322    34444


Q ss_pred             hhhhc-------CCCcccHHHHHHHHhcCCCC
Q psy4949         145 QEIFS-------GNGKVTVNDFMDTMMSEPGP  169 (275)
Q Consensus       145 ~~cF~-------~d~~Is~~eFl~~~~~d~~P  169 (275)
                      +.++.       ++|.|+.+||+..+++.|-|
T Consensus       124 ~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p~p  155 (159)
T 3i5g_C          124 NDIFTFCDIREDIDGNIKYEDLMKKVMAGPFP  155 (159)
T ss_dssp             HHHHHHTTCCCCSSCCEEHHHHHHHHHHCSCC
T ss_pred             HHHHHHhCcCCCCCCeEeHHHHHHHHHCCCCC
Confidence            44442       36899999999999987655

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.88  E-value=8.3e-09  Score=99.41  Aligned_cols=137  Identities=13%  Similarity=0.139  Sum_probs=95.1

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+...-+   .+..|+..|+..++..+...... .+  +.-..+    -.+..+|+.+|.|++|.|++.||+.+
T Consensus       355 ~~l~~~F~~~D~d---~dG~I~~~El~~~l~~~~~~~~~-~~--~~~~~~----~~~~~~~~~~D~d~dG~I~~~EF~~~  424 (504)
T 3q5i_A          355 KELTDIFKKLDKN---GDGQLDKKELIEGYNVLRNFKNE-LG--ELKNVE----EEVDNILKEVDFDKNGYIEYSEFISV  424 (504)
T ss_dssp             HHHHHHHHHHCTT---CSSEECHHHHHHHHHHHHHHC---CC--SCCCHH----HHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHeeCCC---CCCeEcHHHHHHHHHHhhhcccc-cc--cccccH----HHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            3445566555533   35667777766666655432111 00  111111    22467899999999999999999998


Q ss_pred             HHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHH
Q psy4949          86 LATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDF  159 (275)
Q Consensus        86 Ls~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eF  159 (275)
                      +........++.++.+|+.+ .|++|.|+.+||..++..             .+.+++.++.+|..     ||.|+.+||
T Consensus       425 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~-------------~~~~~~~~~~~~~~~D~d~dG~I~~~EF  491 (504)
T 3q5i_A          425 CMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL-------------TSISEKTWNDVLGEADQNKDNMIDFDEF  491 (504)
T ss_dssp             HSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC-------------SCCCHHHHHHHHHTTCSSCSSSEEHHHH
T ss_pred             HHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh-------------CCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            87666666788999999999 699999999999766542             12346667777764     689999999


Q ss_pred             HHHHhc
Q psy4949         160 MDTMMS  165 (275)
Q Consensus       160 l~~~~~  165 (275)
                      +..+.+
T Consensus       492 ~~~~~~  497 (504)
T 3q5i_A          492 VSMMHK  497 (504)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998864

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.87  E-value=2.4e-08  Score=81.99  Aligned_cols=131  Identities=12%  Similarity=0.229  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCC--CccChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVS--QQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~--~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      +..+.++|+... +   .+..|+..|+..+|..++- .   .|..  ..++.++     +..+++.+|.+++|+|++.||
T Consensus         3 ~~~l~~~F~~~D-d---~~G~i~~~el~~~l~~~~g-~---~~~~~~~~~~~~~-----~~~l~~~~D~~~~g~i~~~eF   69 (173)
T 1alv_A            3 VRQFRRLFAQLA-G---DDMEVSATELMNILNKVVT-R---HPDLKTDGFGIDT-----CRSMVAVMDSDTTGKLGFEEF   69 (173)
T ss_dssp             HHHHHHHHHHHH-G---GGTSBCHHHHHHHHHHHHH-T---CSTTCCSCCCHHH-----HHHHHHHHCTTCSSSBCHHHH
T ss_pred             hhHHHHHHHHHh-C---CCCCcCHHHHHHHHHHhhh-c---ccccccCCCCHHH-----HHHHHHHHcCCCCCccCHHHH
Confidence            445666776664 3   3668999998888877651 1   1210  1122222     456788999999999999999


Q ss_pred             HHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHH
Q psy4949          83 KVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVN  157 (275)
Q Consensus        83 ~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~  157 (275)
                      ...+..      .++++.+|+.+ .|++|.|++.|+..+|+.+       |..    .++..++.+|    .++|.|+.+
T Consensus        70 ~~~~~~------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~dd~dg~i~~~  132 (173)
T 1alv_A           70 KYLWNN------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAA-------GFH----LNEHLYSMIIRRYSDEGGNMDFD  132 (173)
T ss_dssp             HHHHHH------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-------TCC----CCHHHHHHHHHHHTCSSSCBCHH
T ss_pred             HHHHHH------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhcCCCCcCcHH
Confidence            988874      37899999999 6999999999999888754       221    1333444443    347899999


Q ss_pred             HHHHHHhc
Q psy4949         158 DFMDTMMS  165 (275)
Q Consensus       158 eFl~~~~~  165 (275)
                      ||+..+..
T Consensus       133 eF~~~~~~  140 (173)
T 1alv_A          133 NFISCLVR  140 (173)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998753

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=98.86  E-value=1.3e-08  Score=85.17  Aligned_cols=132  Identities=17%  Similarity=0.240  Sum_probs=93.3

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+..--+   .+..|+..|+..+|..+-    .. |     +..+     +.-+++.+|.+++|.|++.+|...
T Consensus        11 ~elk~~F~~~D~d---~dG~I~~~El~~~l~~lg----~~-~-----~~~~-----~~~~~~~~d~d~~~~i~~~ef~~~   72 (176)
T 2lhi_A           11 AEFKEAFALFDKD---NNGSISSSELATVMRSLG----LS-P-----SEAE-----VNDLMNEIDVDGNHQIEFSEFLAL   72 (176)
T ss_dssp             GHHHHHHHTTCSS---CSSCBCHHHHHHHHHHHT----CC-C-----CHHH-----HHHHHTTTCSSCSSSBCTTHHHHH
T ss_pred             HHHHHHHHHHCCC---CCCCCCHHHHHHHHHHcC----CC-h-----hHHH-----HHHHHHHhCcCCCccchHHHHHHH
Confidence            3455677666543   356788889666665542    11 2     2222     356789999999999999999988


Q ss_pred             HHHhcCCC-hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHHHH
Q psy4949          86 LATMCSGK-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVNDF  159 (275)
Q Consensus        86 Ls~Lc~G~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~eF  159 (275)
                      +....... .+++++.+|++| .|++|.|+..||..+|+.       +|+.    .+++.++.+|    .+||.|+.+||
T Consensus        73 ~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~-------~g~~----~~~~ei~~l~~~~dd~dG~I~~~EF  141 (176)
T 2lhi_A           73 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS-------IGEK----LTDAEVDDMLREVSDGSGEINIQQF  141 (176)
T ss_dssp             HTSSCCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHT-------TTCC----CCHHHHHHHHHHHHTTSSCBCTTHH
T ss_pred             HHHhcccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-------cCcc----cchHHHHHHHHhhcCCCCeEeHHHH
Confidence            87666553 577899999999 799999999999887764       2332    1333444444    35799999999


Q ss_pred             HHHHhcC
Q psy4949         160 MDTMMSE  166 (275)
Q Consensus       160 l~~~~~d  166 (275)
                      +..+++.
T Consensus       142 ~~~m~k~  148 (176)
T 2lhi_A          142 AALLSKG  148 (176)
T ss_dssp             HHHHTCC
T ss_pred             HHHHHhc
Confidence            9988654

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.86  E-value=1.1e-08  Score=83.28  Aligned_cols=119  Identities=13%  Similarity=0.178  Sum_probs=82.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..|+..|+..+|..+-    .. |....++.++     +.-+++.+|.+++|.|++.||...+..+      +.++.+|
T Consensus        13 ~G~i~~~el~~~l~~lg----~~-~~~~~~~~~~-----~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   76 (165)
T 1k94_A           13 DGEVDAEELQRCLTQSG----IN-GTYSPFSLET-----CRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF   76 (165)
T ss_dssp             GTSBCHHHHHHHHHHHT----TT-TTSCCCCHHH-----HHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             CCcCCHHHHHHHHHHhc----cc-cCCCCCCHHH-----HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            56799999777766543    11 1111223333     3567889999999999999999988754      7899999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcCCCcccHHHHHHHHhc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~d~~Is~~eFl~~~~~  165 (275)
                      +.+ .|++|.|++.|+..+|+.+       |...+-...+..+..+ .++|.|+.+||+.++..
T Consensus        77 ~~~D~d~~G~i~~~el~~~l~~~-------g~~~~~~~~~~~~~~~-d~dg~i~~~eF~~~~~~  132 (165)
T 1k94_A           77 MTVDQDGSGTVEHHELRQAIGLM-------GYRLSPQTLTTIVKRY-SKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHCTTCCSBCCHHHHHHHHHHT-------TCCCCHHHHHHHHHHH-CBTTBCBHHHHHHHHHH
T ss_pred             HHhCCCCCceECHHHHHHHHHHh-------CCCCCHHHHHHHHHHh-CCCCeEcHHHHHHHHHH
Confidence            999 6999999999998888753       3221100012334444 56899999999998854

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.86  E-value=6.2e-08  Score=83.91  Aligned_cols=144  Identities=15%  Similarity=0.211  Sum_probs=98.7

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+....+   .+..|+..++..+|..++.....      .++.++. .-+..-+++.+|.+++|.|++.+|...+
T Consensus       104 ~l~~~F~~~D~d---~~G~i~~~el~~~l~~~~~~~g~------~~~~~~~-~~~~~~~~~~~d~~~dg~i~~~ef~~~~  173 (263)
T 2f33_A          104 EFMKTWRKYDTD---HSGFIETEELKNFLKDLLEKANK------TVDDTKL-AEYTDLMLKLFDSNNDGKLELTEMARLL  173 (263)
T ss_dssp             HHHHHHTTSSTT---TCSSBCHHHHHHHHHHHHHHHTS------CCCHHHH-HHHHHHHHHHTCSSSSSCBCHHHHHHHS
T ss_pred             HHHHHHHHHCCC---CCCCcCHHHHHHHHHHHHhhcCC------CCCHHHH-HHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence            345666555433   46789999988888887654221      2233333 3334568999999999999999998876


Q ss_pred             HH--------hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc--hHHHhhhhcC--CCc
Q psy4949          87 AT--------MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT--DTLAQEIFSG--NGK  153 (275)
Q Consensus        87 s~--------Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~--e~~v~~cF~~--d~~  153 (275)
                      ..        .......+.++.+|+.+ .|++|.|++.||..+++.+....   +  +.....  +..++.++..  +|.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~---~--~~~~~~e~~~~~~~~~D~d~dG~  248 (263)
T 2f33_A          174 PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKN---K--QELDINNISTYKKNIMALSDGGK  248 (263)
T ss_dssp             CTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHC---T--TTCCTTTHHHHHHHHHTTSBTTE
T ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhc---C--CCCCHHHHHHHHHHhhccCCCCe
Confidence            53        12446678899999999 69999999999999998764311   1  111111  2333333443  689


Q ss_pred             ccHHHHHHHHhc
Q psy4949         154 VTVNDFMDTMMS  165 (275)
Q Consensus       154 Is~~eFl~~~~~  165 (275)
                      |+.+||+.++.+
T Consensus       249 i~~~EF~~~~~~  260 (263)
T 2f33_A          249 LYRTDLALILSA  260 (263)
T ss_dssp             ECGGGTHHHHCC
T ss_pred             EcHHHHHHHHhc
Confidence            999999999854

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.86  E-value=9.6e-09  Score=83.90  Aligned_cols=120  Identities=14%  Similarity=0.189  Sum_probs=82.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHh
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYI  101 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~  101 (275)
                      .+..|+..|+..++..+-    .. |.....+.++     +..+++.+|.+++|.|++.||..++..+      ++++.+
T Consensus        14 ~~G~i~~~el~~~l~~lg----~~-~~~~~~~~~~-----~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~   77 (167)
T 1gjy_A           14 QDGQIDADELQRCLTQSG----IA-GGYKPFNLET-----CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQH   77 (167)
T ss_dssp             TTSCBCHHHHHHHHHHHT----CS-TTSCCCCHHH-----HHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHH
T ss_pred             CCCcCCHHHHHHHHHhhc----cc-CCCCCcCHHH-----HHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence            467899999777666542    11 1101123232     3567899999999999999999988764      789999


Q ss_pred             chhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcCCCcccHHHHHHHHhc
Q psy4949         102 FSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       102 F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~d~~Is~~eFl~~~~~  165 (275)
                      |+.+ .|++|.|++.|+..+|+.+       |...+-...+.....+ .++|.|+.+||+.++..
T Consensus        78 F~~~D~d~~G~i~~~el~~~l~~~-------g~~~~~~~~~~~~~~~-d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           78 FISFDSDRSGTVDPQELQKALTTM-------GFRLNPQTVNSIAKRY-STSGKITFDDYIACCVK  134 (167)
T ss_dssp             HHHHCTTCCSEECHHHHHHHHHTT-------TCCCCHHHHHHHHHHT-CBTTBEEHHHHHHHHHH
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHHc-------CCCCCHHHHHHHHHHh-CcCCcCcHHHHHHHHHH
Confidence            9999 6999999999998877642       3221100012333343 56899999999998754

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.84  E-value=3.5e-08  Score=85.31  Aligned_cols=88  Identities=11%  Similarity=0.082  Sum_probs=69.0

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .+..+++.||.+++|.|++.||...+..+      ++++.+|+.+ .|++|.|+++||..+|+.+       |+.    -
T Consensus        88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~~----~  150 (220)
T 3sjs_A           88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQL-------GFY----I  150 (220)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHH-------TCC----C
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHh-------CCC----C
Confidence            35678999999999999999999988865      8899999999 6999999999999888853       321    1


Q ss_pred             chHHHhhhhc----CCCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFS----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~----~d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|.    ++|.|+.+||+..+..
T Consensus       151 ~~~~~~~l~~~~dd~dg~I~~~eF~~~~~~  180 (220)
T 3sjs_A          151 NQRTSLLLHRLFARGMAFCDLNCWIAICAF  180 (220)
T ss_dssp             CHHHHHHHHHHHC--CCSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCCcCcHHHHHHHHHH
Confidence            2333333333    4789999999997754

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.84  E-value=2.6e-08  Score=83.58  Aligned_cols=124  Identities=17%  Similarity=0.196  Sum_probs=85.3

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+....+   .+..|+..|+..+|.    .+      +..++.++     +..+|+.+|.+++|.|++.||+..+
T Consensus        28 ~l~~~F~~~D~d---~~G~I~~~El~~~l~----~~------~~~~~~~~-----~~~l~~~~D~d~dG~I~~~EF~~~~   89 (191)
T 1y1x_A           28 ELMEWFRAVDTD---GSGAISVPELNAALS----SA------GVPFSLAT-----TEKLLHMYDKNHSGEITFDEFKDLH   89 (191)
T ss_dssp             CHHHHHHHHCTT---CSSSBCHHHHHHHHC----BT------TBCCCHHH-----HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHcCC---CCCcCcHHHHHHHHH----Hc------CCCCCHHH-----HHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            344556555433   355677777555441    10      01122222     3567899999999999999999988


Q ss_pred             HHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHH
Q psy4949          87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFM  160 (275)
Q Consensus        87 s~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl  160 (275)
                      ..+      ++++.+|+.+ .|++|.|++.||..+++.+       |+    ..+++.++.+|..     +|.|+.+||+
T Consensus        90 ~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------g~----~~~~~~~~~~~~~~D~d~dg~i~~~eF~  152 (191)
T 1y1x_A           90 HFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSS-------GY----QVSEQTFQALMRKFDRQRRGSLGFDDYV  152 (191)
T ss_dssp             HHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTT-------SC----CCCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            753      7899999999 6999999999998887642       32    2245556665543     6899999999


Q ss_pred             HHHhc
Q psy4949         161 DTMMS  165 (275)
Q Consensus       161 ~~~~~  165 (275)
                      ..+..
T Consensus       153 ~~~~~  157 (191)
T 1y1x_A          153 ELSIF  157 (191)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98864

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.84  E-value=4.4e-08  Score=80.36  Aligned_cols=138  Identities=12%  Similarity=0.119  Sum_probs=100.2

Q ss_pred             chHHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCe
Q psy4949           3 IDIWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGR   76 (275)
Q Consensus         3 vd~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~   76 (275)
                      |+...+..+++.. |.++.-+...++..+    +..++..+-..  ..+.|+.+++..++.     ..+|+.||.+++|.
T Consensus        20 i~~~el~~~l~~~~g~~~~~~~~~~~~~~----~~~l~~~~D~~--~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~   93 (173)
T 1alv_A           20 VSATELMNILNKVVTRHPDLKTDGFGIDT----CRSMVAVMDSD--TTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGT   93 (173)
T ss_dssp             BCHHHHHHHHHHHHHTCSTTCCSCCCHHH----HHHHHHHHCTT--CSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSS
T ss_pred             cCHHHHHHHHHHhhhcccccccCCCCHHH----HHHHHHHHcCC--CCCccCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence            5666677777775 644321223456666    55666666544  236899999887764     35899999999999


Q ss_pred             eehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          77 IRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      |+..||+.+|..+-.....+.++.+|+.+.|++|.|+..||..++...                 +.+...|..     +
T Consensus        94 i~~~el~~~l~~~g~~~~~~~~~~~~~~~dd~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~~  156 (173)
T 1alv_A           94 IGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRL-----------------DAMFRAFKSLDKDGT  156 (173)
T ss_dssp             BCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHHH-----------------HHHHHHHHHHSSSCC
T ss_pred             CCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCcCcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCC
Confidence            999999999998755556678899999998899999999998877653                 233444543     6


Q ss_pred             CcccHHHHHHHHh
Q psy4949         152 GKVTVNDFMDTMM  164 (275)
Q Consensus       152 ~~Is~~eFl~~~~  164 (275)
                      |.||.+ |.+|+.
T Consensus       157 G~i~~~-~~~~l~  168 (173)
T 1alv_A          157 GQIQVN-IQEWLQ  168 (173)
T ss_dssp             SEEEEE-HHHHHH
T ss_pred             CeecHh-HHHHHH
Confidence            889887 777763

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.84  E-value=5.1e-10  Score=91.04  Aligned_cols=100  Identities=10%  Similarity=0.022  Sum_probs=42.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchh-hccCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPA-AVLES  134 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~-~~gE~  134 (275)
                      ...+|+.+|.|++|+|++.||+.++..+..     ...+++++.+|++| .|++|.|++.||..+++.+..... ..++ 
T Consensus        29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~-  107 (143)
T 3a4u_B           29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP-  107 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred             CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCC-
Confidence            457999999999999999999999987643     36778999999999 699999999999887776532210 0011 


Q ss_pred             CCCCCc--hHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949         135 PSFSYT--DTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus       135 ~~f~~~--e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                       .....  +..++.+|..     ||.|+.+||+..+
T Consensus       108 -~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          108 -LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             --CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             -CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence             01111  2234455543     6899999998754

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.84  E-value=2.6e-08  Score=83.64  Aligned_cols=100  Identities=13%  Similarity=0.156  Sum_probs=74.4

Q ss_pred             HHHHHHhhc---CCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH-HHHhc-hhhccCCC
Q psy4949          62 LNWLLSAYS---VESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ-DVLAI-PAAVLESP  135 (275)
Q Consensus        62 ~~~lf~~fD---~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~-~i~~i-~~~~gE~~  135 (275)
                      +.-+++.+|   .+++|.|++.+|+..+..+..+...++++++|++| .|++|.|++.||..+|+ .+-.- +....   
T Consensus        61 ~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~---  137 (179)
T 3a8r_A           61 AVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIK---  137 (179)
T ss_dssp             HHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHH---
T ss_pred             HHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccc---
Confidence            456777887   57789999999998888888888999999999999 69999999999998887 43110 00000   


Q ss_pred             CCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         136 SFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       136 ~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                        ..+++.++.+|..     +|.|+.+||+.++...
T Consensus       138 --~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  171 (179)
T 3a8r_A          138 --ERADEYTALIMEELDPTNLGYIEMEDLEALLLQS  171 (179)
T ss_dssp             --HHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred             --cchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence              0034556666653     6899999999988654

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.84  E-value=6.3e-09  Score=82.88  Aligned_cols=129  Identities=12%  Similarity=0.165  Sum_probs=88.2

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCC--CCCeeehHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVE--SLGRIRVFSIKV   84 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~--~~G~I~~~ef~~   84 (275)
                      .+-++|+....+   .+..|+..++..+|..+    ..      .++.+     -+..+++.+|.+  ++|.|++.+|..
T Consensus        11 ~l~~~F~~~D~d---~~G~i~~~el~~~l~~~----g~------~~~~~-----~~~~l~~~~d~~~~~~g~i~~~eF~~   72 (151)
T 1w7j_B           11 EFKEAFELFDRV---GDGKILYSQCGDVMRAL----GQ------NPTNA-----EVLKVLGNPKSDELKSRRVDFETFLP   72 (151)
T ss_dssp             CHHHHHHHHCCS---SSSEEESTTHHHHHHHT----TC------CCCHH-----HHHHHTTCCCHHHHTTCEEEHHHHHH
T ss_pred             HHHHHHHHHCCC---CCCcCcHHHHHHHHHHc----CC------CCCHH-----HHHHHHHHhCcCcCCCCcCcHHHHHH
Confidence            345566555433   24567777865555432    11      11222     245788999999  999999999999


Q ss_pred             HHHHhcCC---ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc----CCCcccH
Q psy4949          85 ALATMCSG---KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS----GNGKVTV  156 (275)
Q Consensus        85 aLs~Lc~G---~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~----~d~~Is~  156 (275)
                      ++......   ...++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .+++.++.+|.    ++|.|+.
T Consensus        73 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~d~~dg~i~~  141 (151)
T 1w7j_B           73 MLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL-------GEK----MTEEEVETVLAGHEDSNGCINY  141 (151)
T ss_dssp             HHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHS-------SSC----CCHHHHHHHHTTCCCTTSEEEH
T ss_pred             HHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------CCC----CCHHHHHHHHHhccCCCCeEeH
Confidence            99987653   3467788999999 6999999999999888752       322    23555666654    3689999


Q ss_pred             HHHHHHHh
Q psy4949         157 NDFMDTMM  164 (275)
Q Consensus       157 ~eFl~~~~  164 (275)
                      +||+.++.
T Consensus       142 ~eF~~~~~  149 (151)
T 1w7j_B          142 EAFLKHIL  149 (151)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHHh
Confidence            99999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.84  E-value=6.5e-09  Score=99.90  Aligned_cols=92  Identities=20%  Similarity=0.200  Sum_probs=73.4

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .+..+|+.||.|++|.|++.||..++........+++++.+|+.+ .|+||.|+.+||..+|..             ...
T Consensus       391 ~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-------------~~~  457 (494)
T 3lij_A          391 EVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL-------------DHL  457 (494)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-------------CSC
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------------cCC
Confidence            356789999999999999999999987665566788999999999 699999999999876542             122


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|..     ||.|+.+||+..+.+
T Consensus       458 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  488 (494)
T 3lij_A          458 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQK  488 (494)
T ss_dssp             CCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            34555666553     689999999998864

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.83  E-value=6.9e-09  Score=81.88  Aligned_cols=129  Identities=19%  Similarity=0.229  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+-++|+....+   .+..|+..++..+|..+    ..      .++.++.        ...++. ++|.|++.+|+.
T Consensus         6 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~----g~------~~~~~~~--------~~~~~~-~~g~i~~~eF~~   63 (143)
T 3j04_B            6 IQEFKEAFNMIDQN---RDGFIDKEDLHDMLASM----GK------NPTDEYL--------EGMMSE-APGPINFTMFLT   63 (143)
T ss_dssp             HHHHHHHHTTTCSS---CTTCCCHHHHHHHHHHT----SC------CCCHHHH--------HTTTTT-SSSCCCHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCCCcCHHHHHHHHHHh----CC------CCCHHHH--------HHHHHh-CCCCcCHHHHHH
Confidence            44556677665533   36678888866666543    11      1222222        222333 899999999999


Q ss_pred             HHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHH
Q psy4949          85 ALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVN  157 (275)
Q Consensus        85 aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~  157 (275)
                      ++.... .....++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .++..++.+|..     +|.|+.+
T Consensus        64 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~~----~~~~~~~~~~~~~D~d~dg~i~~~  132 (143)
T 3j04_B           64 MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM-------GDR----FTDEEVDEMYREAPIDKKGNFNYV  132 (143)
T ss_dssp             HHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTS-------SSC----CCHHHHHHHHHHTTCCSSSCCCST
T ss_pred             HHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-------CCC----CCHHHHHHHHHHcCCCCCCcCcHH
Confidence            999654 456788999999999 6999999999998888742       321    234555555543     6899999


Q ss_pred             HHHHHHhcC
Q psy4949         158 DFMDTMMSE  166 (275)
Q Consensus       158 eFl~~~~~d  166 (275)
                      ||+..+.+.
T Consensus       133 eF~~~~~~~  141 (143)
T 3j04_B          133 EFTRILKHG  141 (143)
T ss_dssp             HHHHHHHSS
T ss_pred             HHHHHHhcc
Confidence            999998765

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.82  E-value=1e-07  Score=77.46  Aligned_cols=136  Identities=13%  Similarity=0.175  Sum_probs=101.3

Q ss_pred             cchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCe
Q psy4949           2 TIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGR   76 (275)
Q Consensus         2 lvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~   76 (275)
                      .|+...+..+++..|++..  ...++..+    +..++..+-...  .+.|+.+++..++.     ..+|+.||.+++|.
T Consensus        15 ~i~~~el~~~l~~lg~~~~--~~~~~~~~----~~~l~~~~D~~~--~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~   86 (165)
T 1k94_A           15 EVDAEELQRCLTQSGINGT--YSPFSLET----CRIMIAMLDRDH--TGKMGFNAFKELWAALNAWKENFMTVDQDGSGT   86 (165)
T ss_dssp             SBCHHHHHHHHHHHTTTTT--SCCCCHHH----HHHHHHHHCTTC--SSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSB
T ss_pred             cCCHHHHHHHHHHhccccC--CCCCCHHH----HHHHHHHhCCCC--CCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence            3677788888888887542  23456666    556666665442  36889888877643     35899999999999


Q ss_pred             eehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          77 IRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      |+..||+.+|..+-..-..+.++.+|+.+ |++|.|+..|+..++...                 +.+...|..     +
T Consensus        87 i~~~el~~~l~~~g~~~~~~~~~~~~~~~-d~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~~  148 (165)
T 1k94_A           87 VEHHELRQAIGLMGYRLSPQTLTTIVKRY-SKNGRIFFDDYVACCVKL-----------------RALTDFFRKRDHLQQ  148 (165)
T ss_dssp             CCHHHHHHHHHHTTCCCCHHHHHHHHHHH-CBTTBCBHHHHHHHHHHH-----------------HHHHHHHHTTCTTCC
T ss_pred             ECHHHHHHHHHHhCCCCCHHHHHHHHHHh-CCCCeEcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCC
Confidence            99999999999875555677889999999 999999999998888754                 234444553     5


Q ss_pred             CcccHHHHHHHHh
Q psy4949         152 GKVTVNDFMDTMM  164 (275)
Q Consensus       152 ~~Is~~eFl~~~~  164 (275)
                      |.||.+ |.+|+.
T Consensus       149 G~i~~~-~~~~l~  160 (165)
T 1k94_A          149 GSANFI-YDDFLQ  160 (165)
T ss_dssp             SEEEEE-HHHHHH
T ss_pred             CeEeee-HHHHHH
Confidence            788877 777763

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.82  E-value=3.4e-08  Score=95.32  Aligned_cols=91  Identities=20%  Similarity=0.316  Sum_probs=70.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      ..+++.+|.+++|+|++.||+..+..+. .....++++.+|+.+ .|++|.|+++||..+|+.+       |+    .-+
T Consensus       351 ~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~l-------G~----~ls  419 (450)
T 3sg6_A          351 QDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-------GE----KLT  419 (450)
T ss_dssp             HHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------TC----CCC
T ss_pred             HHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHh-------CC----CCC
Confidence            4688999999999999999999887544 456678899999999 6999999999999998864       22    123


Q ss_pred             hHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      ++.++.+|.     +++.|+.+||+.++.
T Consensus       420 ~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          420 DEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             HHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            455555554     368999999999874

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.81  E-value=1.9e-08  Score=84.68  Aligned_cols=119  Identities=16%  Similarity=0.204  Sum_probs=81.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..|+..|+..+|..+-.    . |....++.++     +..+++.+|.+++|.|++.||...+..+      ++++.+|
T Consensus        46 ~G~i~~~el~~~l~~lg~----~-~~~~~~~~~~-----~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F  109 (198)
T 1juo_A           46 DGQIDADELQRCLTQSGI----A-GGYKPFNLET-----CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF  109 (198)
T ss_dssp             TTEECHHHHHHHHHHHTT----T-CSSCCCCHHH-----HHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHH
T ss_pred             CCcCCHHHHHHHHHHhcc----c-CCCCCCCHHH-----HHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHH
Confidence            566888886666655431    1 0101122222     3568899999999999999999988754      7899999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcCCCcccHHHHHHHHhc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~d~~Is~~eFl~~~~~  165 (275)
                      +.+ .|++|.|+++||..+|+.+       |+..+-...+...+.+ .++|.|+.+||+.++..
T Consensus       110 ~~~D~d~~G~I~~~el~~~l~~~-------g~~~~~~~~~~l~~~~-d~dg~i~~~eF~~~~~~  165 (198)
T 1juo_A          110 ISFDTDRSGTVDPQELQKALTTM-------GFRLSPQAVNSIAKRY-STNGKITFDDYIACCVK  165 (198)
T ss_dssp             HTTCTTCCSEECHHHHHHHHHHT-------TCCCCHHHHHHHHHHT-CSSSSEEHHHHHHHHHH
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHh-------CCCCCHHHHHHHHHHh-CCCCeEcHHHHHHHHHH
Confidence            999 6999999999998888753       3211100012333444 56899999999998754

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.81  E-value=1e-07  Score=77.67  Aligned_cols=134  Identities=13%  Similarity=0.168  Sum_probs=99.1

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I   77 (275)
                      |+...+..+++..|++..  ...++..+    +..++..+-...  .+.|+.+++..++.     ..+|+.||.+++|.|
T Consensus        18 i~~~el~~~l~~lg~~~~--~~~~~~~~----~~~l~~~~D~~~--~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i   89 (167)
T 1gjy_A           18 IDADELQRCLTQSGIAGG--YKPFNLET----CRLMVSMLDRDM--SGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTV   89 (167)
T ss_dssp             BCHHHHHHHHHHHTCSTT--SCCCCHHH----HHHHHHHHCTTC--CSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEE
T ss_pred             CCHHHHHHHHHhhcccCC--CCCcCHHH----HHHHHHHHCCCC--CCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcC
Confidence            677788888888887532  23466666    566666665442  36899888877653     357999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CC
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NG  152 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~  152 (275)
                      +..||+.+|..+-.....+.++.+|+.+ |++|.|+..||..++..+                 +.+...|..     +|
T Consensus        90 ~~~el~~~l~~~g~~~~~~~~~~~~~~~-d~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~~G  151 (167)
T 1gjy_A           90 DPQELQKALTTMGFRLNPQTVNSIAKRY-STSGKITFDDYIACCVKL-----------------RALTDSFRRRDSAQQG  151 (167)
T ss_dssp             CHHHHHHHHHTTTCCCCHHHHHHHHHHT-CBTTBEEHHHHHHHHHHH-----------------HHHHHHHHHHCTTCCS
T ss_pred             CHHHHHHHHHHcCCCCCHHHHHHHHHHh-CcCCcCcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCCe
Confidence            9999999998765555677889999999 999999999998888754                 234444543     58


Q ss_pred             cccHHHHHHHH
Q psy4949         153 KVTVNDFMDTM  163 (275)
Q Consensus       153 ~Is~~eFl~~~  163 (275)
                      .||.+ |.+|+
T Consensus       152 ~i~~~-~~~~l  161 (167)
T 1gjy_A          152 MVNFS-YDDFI  161 (167)
T ss_dssp             EEEEE-HHHHH
T ss_pred             eEEee-HHHHH
Confidence            88876 44444

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.80  E-value=2.4e-08  Score=78.55  Aligned_cols=129  Identities=13%  Similarity=0.108  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      ++..+-++|+....+   .+..|+..++..+|..+    ..      ..+.++.        ...++ +++|.|++.+|+
T Consensus         3 ~~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~----g~------~~~~~~~--------~~~~~-~~~g~i~~~eF~   60 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRH---GTGRIPKTSIGDLLRAC----GQ------NPTLAEI--------TEIES-TLPAEVDMEQFL   60 (140)
T ss_dssp             CCTTTHHHHHHTCSS---SSSEECHHHHHHHHHHT----SC------CCCHHHH--------HHHHT-TSCSSEEHHHHH
T ss_pred             hHHHHHHHHHHHCCC---CCCcCCHHHHHHHHHHc----CC------CCCHHHH--------HHHHh-CCCCcCcHHHHH
Confidence            344556777776644   46779999976666543    11      1222222        22233 899999999999


Q ss_pred             HHHHHhcCCC---hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc----CCCccc
Q psy4949          84 VALATMCSGK---LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS----GNGKVT  155 (275)
Q Consensus        84 ~aLs~Lc~G~---l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~----~d~~Is  155 (275)
                      .++..+....   ..++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .++..++.+|.    ++|.|+
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~d~~dg~i~  129 (140)
T 1ggw_A           61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-------GEK----LSNEEMDELLKGVPVKDGMVN  129 (140)
T ss_dssp             HHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-------HSC----SCHHHHHHHHHHTTCSSCCST
T ss_pred             HHHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-------CCC----CCHHHHHHHHHhccCCCCcEe
Confidence            9988775432   348999999999 6999999999999988864       321    13444444444    578999


Q ss_pred             HHHHHHHHhc
Q psy4949         156 VNDFMDTMMS  165 (275)
Q Consensus       156 ~~eFl~~~~~  165 (275)
                      .+||+.++.+
T Consensus       130 ~~eF~~~~~~  139 (140)
T 1ggw_A          130 YHDFVQMILA  139 (140)
T ss_dssp             TTHHHHHHHC
T ss_pred             HHHHHHHHhc
Confidence            9999998754

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.79  E-value=3.8e-08  Score=80.53  Aligned_cols=125  Identities=11%  Similarity=0.171  Sum_probs=85.8

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      .+.++|+...-+   .+..|+..|+..+|..+    ..     ..++.++     +..+++.+|.+++|.|++.||..++
T Consensus         8 ~l~~~F~~~D~d---~~G~i~~~e~~~~l~~~----~~-----~~~~~~~-----~~~l~~~~D~~~~g~i~~~ef~~~~   70 (172)
T 2znd_A            8 FLWNVFQRVDKD---RSGVISDTELQQALSNG----TW-----TPFNPVT-----VRSIISMFDRENKAGVNFSEFTGVW   70 (172)
T ss_dssp             HHHHHHHHHCTT---CSSCEEHHHHHHHCCCS----SS-----SCCCHHH-----HHHHHHHHCSSSSSEECHHHHHHHH
T ss_pred             HHHHHHHHhCCC---CCCcCcHHHHHHHHHhc----CC-----CCCCHHH-----HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            455666665543   35678888855544421    10     1122222     3567889999999999999999887


Q ss_pred             HHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHH
Q psy4949          87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFM  160 (275)
Q Consensus        87 s~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl  160 (275)
                      ..+      ++++.+|+.+ .|++|.|+..|+..+|+.+       |.    ..++..++.+|..     +|.|+.+||+
T Consensus        71 ~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~----~~~~~~~~~~~~~~d~~~dg~i~~~eF~  133 (172)
T 2znd_A           71 KYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGF-------GY----RLSDQFHDILIRKFDRQGRGQIAFDDFI  133 (172)
T ss_dssp             HHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred             HHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHc-------CC----CCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            743      7889999999 6999999999998888652       22    1234555555543     6899999999


Q ss_pred             HHHhc
Q psy4949         161 DTMMS  165 (275)
Q Consensus       161 ~~~~~  165 (275)
                      ..+..
T Consensus       134 ~~~~~  138 (172)
T 2znd_A          134 QGCIV  138 (172)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88754

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.79  E-value=1.1e-08  Score=88.52  Aligned_cols=90  Identities=20%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             cCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh
Q psy4949          70 SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF  148 (275)
Q Consensus        70 D~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF  148 (275)
                      |.+++|.|++.||+.++..+....-.++++.+|+.| .|++|.|++.||..+|+.+...    +...  ...+.....+-
T Consensus       107 D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~----g~~~--~e~~~~~~~~D  180 (226)
T 2lvv_A          107 KVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEW----GVDI--TDATTVFNEID  180 (226)
T ss_dssp             HHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHH----TCCC--CSCHHHHHHHC
T ss_pred             CCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhc----CCCH--HHHHHHHHHhC
Confidence            999999999999999877777666678999999999 7999999999999999875321    1111  11233333321


Q ss_pred             -cCCCcccHHHHHHHHhc
Q psy4949         149 -SGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       149 -~~d~~Is~~eFl~~~~~  165 (275)
                       .++|.|+.+||+.++.+
T Consensus       181 ~d~dG~Is~~EF~~~~~~  198 (226)
T 2lvv_A          181 TNGSGVVTFDEFSCWAVT  198 (226)
T ss_dssp             CSCSSCEEHHHHHHHHHH
T ss_pred             CCCCCcEeHHHHHHHHHh
Confidence             13789999999999865

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.78  E-value=1.5e-07  Score=79.15  Aligned_cols=113  Identities=12%  Similarity=0.146  Sum_probs=88.0

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I   77 (275)
                      |+...+..+++..|++..  ...++..+    +..++..+-.+.  .+.|+.+++..++.     ..+|+.||.+++|.|
T Consensus        49 i~~~el~~~l~~lg~~~~--~~~~~~~~----~~~l~~~~D~d~--~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I  120 (198)
T 1juo_A           49 IDADELQRCLTQSGIAGG--YKPFNLET----CRLMVSMLDRDM--SGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV  120 (198)
T ss_dssp             ECHHHHHHHHHHHTTTCS--SCCCCHHH----HHHHHHHHCTTC--SSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCHHHHHHHHHHhcccCC--CCCCCHHH----HHHHHHHhCCCC--CCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCcC
Confidence            677788888888887532  23466666    566666665542  36789888877653     357999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHH
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i  124 (275)
                      +..||+.+|..+-..-..+.++.+|+.+ |++|.|+..||..++..+
T Consensus       121 ~~~el~~~l~~~g~~~~~~~~~~l~~~~-d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          121 DPQELQKALTTMGFRLSPQAVNSIAKRY-STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             CHHHHHHHHHHTTCCCCHHHHHHHHHHT-CSSSSEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCHHHHHHHHHHh-CCCCeEcHHHHHHHHHHH
Confidence            9999999999875555677889999999 999999999998888764

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.77  E-value=1.7e-07  Score=75.94  Aligned_cols=82  Identities=15%  Similarity=0.145  Sum_probs=65.3

Q ss_pred             CCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-
Q psy4949          74 LGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-  150 (275)
Q Consensus        74 ~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-  150 (275)
                      +|.|++.+|..++.... .....++++.+|+.+ .|++|.|++.||..+|+.+       |+.    .++..++.+|.. 
T Consensus        72 dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~~~  140 (166)
T 2mys_B           72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-------GGR----FTPEEIKNMWAAF  140 (166)
T ss_pred             CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-------CCC----CCHHHHHHHHHhc
Confidence            89999999999998664 446788999999999 6999999999999888752       321    235556666653 


Q ss_pred             ----CCcccHHHHHHHHhcC
Q psy4949         151 ----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       151 ----d~~Is~~eFl~~~~~d  166 (275)
                          +|.|+.+||+..+...
T Consensus       141 D~d~dg~I~~~eF~~~~~~~  160 (166)
T 2mys_B          141 PPDVAGNVDYKNICYVITHG  160 (166)
T ss_pred             CCCCCCeEeHHHHHHHHHhc
Confidence                6899999999988653

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.76  E-value=1.6e-07  Score=78.73  Aligned_cols=132  Identities=17%  Similarity=0.189  Sum_probs=95.1

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I   77 (275)
                      |+...+..+++..|.       .++..+    +..++..+-.+.  .+.|+.+++..++.     ..+|+.||.+++|.|
T Consensus        44 I~~~El~~~l~~~~~-------~~~~~~----~~~l~~~~D~d~--dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i  110 (191)
T 1y1x_A           44 ISVPELNAALSSAGV-------PFSLAT----TEKLLHMYDKNH--SGEITFDEFKDLHHFILSMREGFRKRDSSGDGRL  110 (191)
T ss_dssp             BCHHHHHHHHCBTTB-------CCCHHH----HHHHHHHHCTTC--SSSBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCB
T ss_pred             CcHHHHHHHHHHcCC-------CCCHHH----HHHHHHHhCCCC--CCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence            455566666632221       244555    556666665442  36899888877653     458999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      +..||+.++..+...-..+.++.+|+.+ .|++|.|+.+||..++..+                 +.+...|..     +
T Consensus       111 ~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~d  173 (191)
T 1y1x_A          111 DSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV-----------------CRVRNVFAFYDRERT  173 (191)
T ss_dssp             CHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----------------HHHHHHHHHHCTTCC
T ss_pred             cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH-----------------HHHHHHHHHhCcCCC
Confidence            9999999998775556677889999999 6899999999998888753                 233334442     5


Q ss_pred             Cc--ccHHHHHHHHh
Q psy4949         152 GK--VTVNDFMDTMM  164 (275)
Q Consensus       152 ~~--Is~~eFl~~~~  164 (275)
                      |.  ++.+||+..++
T Consensus       174 G~i~~~~~eF~~~~~  188 (191)
T 1y1x_A          174 GQVTFTFDTFIGGSV  188 (191)
T ss_dssp             SEEEEEHHHHHHHHH
T ss_pred             ceEEeeHHHHHHHHH
Confidence            76  67899998764

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.76  E-value=3.2e-08  Score=85.71  Aligned_cols=145  Identities=12%  Similarity=0.192  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+....+   .+..|+..|+..+|..+....... +.  .+  .    -.+.-+++.+|.+++|.|++.||..
T Consensus        15 ~~~l~~~F~~~D~d---~~G~i~~~El~~~l~~l~~~~~~~-~~--~~--~----~~~~~l~~~~D~~~~g~i~~~Ef~~   82 (263)
T 2f33_A           15 ASQFFEIWLHFDAD---GSGYLEGKELQNLIQELLQARKKA-GL--EL--S----PEMKTFVDQYGQRDDGKIGIVELAH   82 (263)
T ss_dssp             HHHHHHHHHHHCTT---CSSSBCSHHHHHHHHHHHHHHHHH-TC--CC--C----HHHHHHHHHHTTGGGCCBCHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCCCcCHHHHHHHHHHHHhhcCCC-cc--ch--H----HHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            44566677666543   356788888888777776554431 00  11  1    1245678899999999999999998


Q ss_pred             HHHHh---------cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----
Q psy4949          85 ALATM---------CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----  149 (275)
Q Consensus        85 aLs~L---------c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----  149 (275)
                      .+...         ......+.++.+|+.+ .|++|.|+..+|..+|+.+...   .|..++-...+..++.+|.     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~---~g~~~~~~~~~~~~~~~~~~~d~~  159 (263)
T 2f33_A           83 VLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK---ANKTVDDTKLAEYTDLMLKLFDSN  159 (263)
T ss_dssp             HTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHH---HTSCCCHHHHHHHHHHHHHHTCSS
T ss_pred             HHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHhcCCC
Confidence            87543         4566778899999999 6999999999999998875321   1222110001122233554     


Q ss_pred             CCCcccHHHHHHHHh
Q psy4949         150 GNGKVTVNDFMDTMM  164 (275)
Q Consensus       150 ~d~~Is~~eFl~~~~  164 (275)
                      ++|.|+.+||+.++.
T Consensus       160 ~dg~i~~~ef~~~~~  174 (263)
T 2f33_A          160 NDGKLELTEMARLLP  174 (263)
T ss_dssp             SSSCBCHHHHHHHSC
T ss_pred             CCCeEcHHHHHHHHH
Confidence            268999999999874

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.75  E-value=3.2e-07  Score=73.51  Aligned_cols=84  Identities=12%  Similarity=0.179  Sum_probs=66.9

Q ss_pred             CCCCeeehHHHHHHHHHh-cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc
Q psy4949          72 ESLGRIRVFSIKVALATM-CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS  149 (275)
Q Consensus        72 ~~~G~I~~~ef~~aLs~L-c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~  149 (275)
                      +++|.|++.+|+.++... ..+...++++.+|+.+ .|++|.|++.+|..+|+.+       |+.    .++..++.+|.
T Consensus        62 ~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~~~~~~~~  130 (156)
T 1wdc_B           62 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-------GDN----FNKDEMRMTFK  130 (156)
T ss_dssp             TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-------SSC----CCHHHHHHHHH
T ss_pred             hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-------CCC----CCHHHHHHHHH
Confidence            589999999999999865 4567789999999999 6999999999999888752       332    23555666554


Q ss_pred             C----CCcccHHHHHHHHhcC
Q psy4949         150 G----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       150 ~----d~~Is~~eFl~~~~~d  166 (275)
                      .    +|.|+.+||+..+...
T Consensus       131 ~~d~~dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_B          131 EAPVEGGKFDYVKFTAMIKGS  151 (156)
T ss_dssp             HCCEETTEECHHHHHHHHHTS
T ss_pred             hcCCCCCEEeHHHHHHHHhcC
Confidence            3    7999999999988754

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.75  E-value=1.3e-08  Score=78.62  Aligned_cols=111  Identities=15%  Similarity=0.241  Sum_probs=77.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcC---CChhhHHH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCS---GKLMDKLR   99 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~---G~l~dKlr   99 (275)
                      +..|+..|+..++..+-       +   ..+ +    -.+..+|+.+|.+++|+|++.||+.++..+..   ....+.++
T Consensus        14 ~g~i~~~e~~~~l~~~~-------~---~~~-~----~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~   78 (134)
T 1jfj_A           14 DGAVSYEEVKAFVSKKR-------A---IKN-E----QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLK   78 (134)
T ss_dssp             SSEEEHHHHHHHHHTTC-------C---SSH-H----HHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHcC-------C---CCC-H----HHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHH
Confidence            56688888666554321       1   111 1    12467899999999999999999988752211   12345589


Q ss_pred             Hhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHH
Q psy4949         100 YIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTM  163 (275)
Q Consensus       100 ~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~  163 (275)
                      .+|+.+ .|++|.|+.+|+..+++.+       ++.        .++.+|.     ++|.|+.+||+.++
T Consensus        79 ~~f~~~D~d~~G~i~~~e~~~~l~~~-------~~~--------~~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           79 VLYKLMDVDGDGKLTKEEVTSFFKKH-------GIE--------KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHCCSSSSEEEHHHHHHHHTTT-------TCH--------HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHHHHCCCCCCccCHHHHHHHHHHh-------CHH--------HHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            999999 6999999999998877632       111        1444454     36899999999876

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.73  E-value=1.5e-07  Score=78.84  Aligned_cols=137  Identities=15%  Similarity=0.127  Sum_probs=95.0

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I   77 (275)
                      |+...+-.+++..+.+.+ +...++..+    +..++..+-++.  .+.|+.+++..++.     ..+|+.|| +++|+|
T Consensus        21 I~~~EL~~~l~~l~~~~~-~g~~~~~~~----~~~l~~~~D~d~--~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~I   92 (174)
T 2i7a_A           21 IDATQLQGLLNQELLTGP-PGDMFSLDE----CRSLVALMELKV--NGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVL   92 (174)
T ss_dssp             EEHHHHHHHHHHHHC------CCCCHHH----HHHHHHHHCSSC--SSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTBE
T ss_pred             CCHHHHHHHHHHHHhccC-CCCCCCHHH----HHHHHHHHCCCC--CCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCcC
Confidence            566777788887643311 012345556    556666665543  36899988877653     46899999 999999


Q ss_pred             ehHHHHHHHHHh----cCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---
Q psy4949          78 RVFSIKVALATM----CSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---  150 (275)
Q Consensus        78 ~~~ef~~aLs~L----c~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---  150 (275)
                      +..|++.+|..+    -..-..+.++.+++.+.|++|.|+.+||..++...                 +.+...|..   
T Consensus        93 ~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~dd~dG~I~~~EF~~~~~~~-----------------~~~~~~F~~~D~  155 (174)
T 2i7a_A           93 LSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRVSFPSLVCFLMRL-----------------EAMAKTFRNLSK  155 (174)
T ss_dssp             EGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHSCTTSEECHHHHHHHHHHH-----------------HHHHHHHHHHCS
T ss_pred             CHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHcCCCCeEcHHHHHHHHHHH-----------------HHHHHHHHHhCC
Confidence            999999999876    22234566789999888889999999998877643                 223444543   


Q ss_pred             --CC-cccHHHHHHHHh
Q psy4949         151 --NG-KVTVNDFMDTMM  164 (275)
Q Consensus       151 --d~-~Is~~eFl~~~~  164 (275)
                        +| .++.+||++.++
T Consensus       156 d~~GI~~~~~Ef~~~~~  172 (174)
T 2i7a_A          156 DGKGLYLTEMEWMSLVM  172 (174)
T ss_dssp             SSSCCCCCHHHHHHHHH
T ss_pred             CCCCceecHHHHHHHHH
Confidence              56 348889998764

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=98.73  E-value=2.3e-08  Score=76.12  Aligned_cols=90  Identities=19%  Similarity=0.265  Sum_probs=69.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|.  +|.|++.||..+++.  .....++++.+|+.+ .|++|.|++.|+..+|+.+..    .|.    ..++
T Consensus        12 ~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~----~g~----~~~~   79 (109)
T 5pal_A           12 NKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA----HGR----DLND   79 (109)
T ss_dssp             HHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCT----TCC----CCCH
T ss_pred             HHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH----cCC----CCCH
Confidence            567788887  899999999998763  466788999999999 699999999999988876411    122    2235


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..     +|.|+.+||+.++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 5pal_A           80 TETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            556665553     68999999999874

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.73  E-value=2.2e-07  Score=75.97  Aligned_cols=116  Identities=12%  Similarity=0.176  Sum_probs=86.8

Q ss_pred             CCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHH
Q psy4949          26 VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRY  100 (275)
Q Consensus        26 l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~  100 (275)
                      ++..+    +..++..+-...  .+.|+.+++..++.     ..+|+.||.+++|.|+..+|+.+|..+-.....+.++.
T Consensus        41 ~~~~~----~~~l~~~~D~~~--~g~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~  114 (172)
T 2znd_A           41 FNPVT----VRSIISMFDREN--KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI  114 (172)
T ss_dssp             CCHHH----HHHHHHHHCSSS--SSEECHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CCHHH----HHHHHHHhCCCC--CCcCCHHHHHHHHHHHHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHH
Confidence            45556    555666665442  36789888877653     45899999999999999999999998755566777899


Q ss_pred             hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCccc--HHHHHHHHh
Q psy4949         101 IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVT--VNDFMDTMM  164 (275)
Q Consensus       101 ~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is--~~eFl~~~~  164 (275)
                      +|+.+ .|++|.|+..||..++...                 +.+...|..     +|.||  .+||+..+.
T Consensus       115 ~~~~~d~~~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~  169 (172)
T 2znd_A          115 LIRKFDRQGRGQIAFDDFIQGCIVL-----------------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVF  169 (172)
T ss_dssp             HHHHHCTTCSSSEEHHHHHHHHHHH-----------------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHH
Confidence            99999 6899999999998887653                 234444543     57886  577777654

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.72  E-value=5e-08  Score=82.28  Aligned_cols=82  Identities=11%  Similarity=0.067  Sum_probs=65.5

Q ss_pred             CCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-
Q psy4949          74 LGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-  150 (275)
Q Consensus        74 ~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-  150 (275)
                      +|.|++.+|+..+.... .....++++.+|+.| .|++|.|++.+|..+| .+       |+.    .++..++.+|.. 
T Consensus       103 ~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~-------g~~----~~~~~~~~l~~~~  170 (196)
T 3dtp_E          103 PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TW-------GEK----FSQDEVDQALSEA  170 (196)
T ss_dssp             SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HS-------SSC----CCHHHHHHHHHSS
T ss_pred             cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc-------CCC----CCHHHHHHHHHHc
Confidence            89999999999998654 456788999999999 6999999999998877 42       321    235566666654 


Q ss_pred             ----CCcccHHHHHHHHhcCC
Q psy4949         151 ----NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus       151 ----d~~Is~~eFl~~~~~d~  167 (275)
                          +|.|+.+||+..+...+
T Consensus       171 D~d~dG~I~~~EF~~~l~~~~  191 (196)
T 3dtp_E          171 PIDGNGLIDIKKFAQILTKGA  191 (196)
T ss_dssp             CEETTEECHHHHHHHHHSSCC
T ss_pred             CCCCCCEEeHHHHHHHHHcCC
Confidence                68999999999987653

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=98.72  E-value=8.3e-09  Score=78.64  Aligned_cols=90  Identities=18%  Similarity=0.270  Sum_probs=67.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|+|++.||..+++.  .....++++.+|+.+ .|++|.|++.|+..+|+.+.    ..+.    ..++
T Consensus        13 ~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~----~~~~----~~~~   80 (109)
T 3fs7_A           13 ESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS----SSAR----VLTS   80 (109)
T ss_dssp             HHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC----TTSC----CCCH
T ss_pred             HHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh----cccc----cCCH
Confidence            46678888  7999999999998764  567788999999999 69999999999876655320    0021    2235


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++.+|..     +|.|+.+||+.++.
T Consensus        81 ~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           81 AETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            556666553     68999999999774

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.72  E-value=3.9e-08  Score=78.01  Aligned_cols=91  Identities=11%  Similarity=0.137  Sum_probs=68.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHh-cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATM-CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~L-c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      +..+++.+|.+    |++.+|+.++... ..+...++++.+|+.+ .|++|.|++.+|..+|+.+       |+..+-..
T Consensus        53 ~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~~~~~~  121 (146)
T 2qac_A           53 EKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-------GDALTDQE  121 (146)
T ss_dssp             HHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHS-------SSCCCHHH
T ss_pred             HHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-------CCCCCHHH
Confidence            35677889988    9999999999864 4556788999999999 6999999999999888752       32211000


Q ss_pred             chHHHhhhhcCCCcccHHHHHHHHh
Q psy4949         140 TDTLAQEIFSGNGKVTVNDFMDTMM  164 (275)
Q Consensus       140 ~e~~v~~cF~~d~~Is~~eFl~~~~  164 (275)
                      .+..+..+ .++|.|+.+||+..+.
T Consensus       122 ~~~~~~~~-d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A          122 AIDALNAF-SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHHHH-CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHc-CCCCcCcHHHHHHHHh
Confidence            12344444 6689999999999774

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.72  E-value=2.7e-07  Score=79.62  Aligned_cols=143  Identities=9%  Similarity=0.003  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHH------------HHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETL------------LSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLS   67 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~------------L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~   67 (275)
                      +..+-++|+...-+   .+..|+..|+..+            +..++..+-+.  ..+.|+.+++..++.     ..+|+
T Consensus        50 ~~~l~~~F~~~D~d---~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d--~dg~I~~~EF~~~~~~~~~l~~~F~  124 (220)
T 3sjs_A           50 YTRIYQWFMGVDRD---RSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTD--FNGHISFYEFMAMYKFMELAYNLFV  124 (220)
T ss_dssp             HHHHHHHHHHHCTT---CCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC---CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC--CCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            34455667665543   3456777776554            44455555433  236899998887764     36899


Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhh
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI  147 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~c  147 (275)
                      .||.+++|+|+..||+.+|..+-..-..+.++.+|+.+.|++|.|+.+||..++..+..+             ...-+..
T Consensus       125 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~dd~dg~I~~~eF~~~~~~l~~~-------------~~~F~~~  191 (220)
T 3sjs_A          125 MNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWIAICAFAAQT-------------RSAYQMI  191 (220)
T ss_dssp             HHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC--CCSEEHHHHHHHHHHHHHH-------------HHHHHHH
T ss_pred             HHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCcCcHHHHHHHHHHHHHH-------------HHHHHHh
Confidence            999999999999999999998766556667899999999899999999998777654211             1111221


Q ss_pred             hc--CCC------cccHHHHHHHHhc
Q psy4949         148 FS--GNG------KVTVNDFMDTMMS  165 (275)
Q Consensus       148 F~--~d~------~Is~~eFl~~~~~  165 (275)
                      ..  ++|      .|+.+||+.+++.
T Consensus       192 ~D~~~~G~i~~~~~i~~~ef~~~~~~  217 (220)
T 3sjs_A          192 FMNPYYGPMKPFNPMEFGKFLDVVTS  217 (220)
T ss_dssp             HTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred             cccCCCCCcccccceeHHHHHHHHHH
Confidence            02  256      6899999998864

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=98.71  E-value=2.2e-08  Score=76.15  Aligned_cols=90  Identities=13%  Similarity=0.219  Sum_probs=68.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.+|+.++..  .....++++.+|+.+ .|++|.|++.+|..+|+.+..    .|.    ..++
T Consensus        12 ~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~----~g~----~~~~   79 (109)
T 1rwy_A           12 KKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS----DAR----DLSA   79 (109)
T ss_dssp             HHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCT----TCC----CCCH
T ss_pred             HHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhc----cCC----CCCH
Confidence            46678888  8999999999998753  356778999999999 699999999999988886521    121    1234


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..     +|.|+.+||+.++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 1rwy_A           80 KETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            556665543     68999999999874

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=98.71  E-value=6.2e-09  Score=83.37  Aligned_cols=92  Identities=14%  Similarity=0.073  Sum_probs=51.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhcc-CCCCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVL-ESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~g-E~~~f~~  139 (275)
                      .-+|+.+|.+++|.|++.+|...+..... ....++++.+|+.+ .|++|.|++.+|..+|+.       +| +.    .
T Consensus         6 ~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-------~g~~~----~   74 (135)
T 3h4s_E            6 KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGI-------LGIEG----M   74 (135)
T ss_dssp             -------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGG-------GTCCC----C
T ss_pred             HHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------hCCCC----C
Confidence            46789999999999999999998875433 34678899999999 799999999999876653       23 11    2


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++..++.+|..     +|.|+.+||+..+.+
T Consensus        75 ~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~  105 (135)
T 3h4s_E           75 SKEDAQGMVREGDLDGDGALNQTEFCVLMVR  105 (135)
T ss_dssp             CHHHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            35556666543     689999999998865

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.69  E-value=4.4e-08  Score=84.18  Aligned_cols=85  Identities=16%  Similarity=0.186  Sum_probs=64.6

Q ss_pred             CCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc
Q psy4949          71 VESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS  149 (275)
Q Consensus        71 ~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~  149 (275)
                      .+++|.|++.||...+..+......++++.+|+.| .|++|.|++.||..+|+.+-..      ..    ++..++.+|.
T Consensus       105 ~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~------~~----~~~e~~~l~~  174 (219)
T 3cs1_A          105 LENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAW------GA----KVEDPAALFK  174 (219)
T ss_dssp             HHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHH------TC----CCSCHHHHHH
T ss_pred             cCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhccc------CC----CHHHHHHHHH
Confidence            38999999999999887776555678899999999 6999999999999998864210      11    1112334443


Q ss_pred             -----CCCcccHHHHHHHHhc
Q psy4949         150 -----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       150 -----~d~~Is~~eFl~~~~~  165 (275)
                           ++|.|+.+||+.++..
T Consensus       175 ~~D~d~dG~I~~~EF~~~~~~  195 (219)
T 3cs1_A          175 ELDKNGTGSVTFDEFAAWASA  195 (219)
T ss_dssp             HHCTTSSSEEEHHHHHHHHHH
T ss_pred             HhCCCCCCcEeHHHHHHHHHH
Confidence                 3789999999999864

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=98.67  E-value=3.7e-08  Score=74.98  Aligned_cols=90  Identities=16%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.+|..++..  .....++++.+|+.+ .|++|.|+.+||..+|+.+.    ..|.    ..++
T Consensus        13 ~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~g~----~~~~   80 (109)
T 1bu3_A           13 AAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFS----AGAR----ALTD   80 (109)
T ss_dssp             HHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHS----TTCC----CCCH
T ss_pred             HHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHc----ccCC----CCCH
Confidence            45667788  8999999999988753  245678899999999 69999999999998887641    0121    1235


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++.+|..     +|.|+.+||+..+.
T Consensus        81 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           81 AETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            556666543     68999999999763

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=98.65  E-value=2e-07  Score=70.84  Aligned_cols=74  Identities=12%  Similarity=0.110  Sum_probs=61.0

Q ss_pred             CccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHh---cCCChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATM---CSGKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~L---c~G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+.+++..++         +..+|+.||.+++|.|+..+++.+|..+   ...-..+.++.+|+.+ .|++|.|+.+|
T Consensus        22 g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~e  101 (109)
T 5pal_A           22 GTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE  101 (109)
T ss_dssp             TCCCHHHHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHH
T ss_pred             CcCcHHHHHHHHhhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence            456666555543         4579999999999999999999999988   5555677789999999 69999999999


Q ss_pred             HHHHHHH
Q psy4949         117 FNEYLQD  123 (275)
Q Consensus       117 l~~~L~~  123 (275)
                      |..+++.
T Consensus       102 F~~~~~~  108 (109)
T 5pal_A          102 FAKMVAQ  108 (109)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9888764

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=98.64  E-value=1.7e-07  Score=76.78  Aligned_cols=87  Identities=18%  Similarity=0.246  Sum_probs=67.8

Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHh
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ  145 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~  145 (275)
                      .++.+.+|.|+|.+|..+++....+ ..+++++.+|+.+ .|++|.|+..+|..+|+.       +|+..    +++.++
T Consensus        56 ~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~-------~g~~l----s~~ei~  124 (153)
T 3i5g_B           56 AMLKECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLEN-------MGDNF----SKEEIK  124 (153)
T ss_dssp             HHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHS-------SSSCC----CHHHHH
T ss_pred             HHHHhccCCccHHHHHHHHHhhhcccccHHHHHHHHhccccCCCCeEeHHHHHHHHHH-------cCCcC----CHHHHH
Confidence            3445778899999999988776655 4678999999999 799999999999887763       34422    455566


Q ss_pred             hhhcC----CCcccHHHHHHHHhc
Q psy4949         146 EIFSG----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       146 ~cF~~----d~~Is~~eFl~~~~~  165 (275)
                      .+|..    +|.|+.+||+..+.+
T Consensus       125 ~~~~~~D~~dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B          125 NVWKDAPLKNKQFNYNKMVDIKGK  148 (153)
T ss_dssp             HHHTTCCEETTEECHHHHHHHHHC
T ss_pred             HHHHHhCCCcCEEcHHHHHHHhcC
Confidence            66664    799999999997754

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=98.62  E-value=2.9e-08  Score=75.43  Aligned_cols=90  Identities=17%  Similarity=0.262  Sum_probs=66.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.||..++..  .....++++.+|+.+ .|++|.|+..+|..+|+.+.    ..|.    ..++
T Consensus        12 ~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~g~----~~~~   79 (108)
T 2pvb_A           12 AAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFS----PSAR----ALTD   79 (108)
T ss_dssp             HHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC----TTSC----CCCH
T ss_pred             HHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHh----ccCC----CCCH
Confidence            45677888  8999999999988753  355688999999999 69999999999976665321    0021    1245


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..     +|.|+.+||+..+.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           80 AETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            556666653     68999999999764

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.60  E-value=3e-07  Score=72.23  Aligned_cols=94  Identities=12%  Similarity=0.202  Sum_probs=76.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.||.+++|.|+..+|+.+|..+......+.++.+|+.+ .|++|.|+..||..++.....-          ...
T Consensus         8 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~----------~~~   77 (142)
T 2bl0_C            8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQ----------TTS   77 (142)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTT----------CCC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcC----------CCh
Confidence            34689999999999999999999999887666777899999999 6899999999998887753211          123


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +..++.+|..     +|.|+.+||..++..
T Consensus        78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~  107 (142)
T 2bl0_C           78 EDILRQAFRTFDPEGTGYIPKAALQDALLN  107 (142)
T ss_dssp             HHHHHHHHHHTCCSSCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            5566666753     689999999998864

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=98.59  E-value=3.8e-08  Score=74.92  Aligned_cols=90  Identities=14%  Similarity=0.228  Sum_probs=67.2

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.+|..++..  .....++++.+|+.+ .|++|.|+.++|..+|+.+.    ..|.    ..++
T Consensus        13 ~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~g~----~~~~   80 (110)
T 1pva_A           13 KKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFA----ADGR----DLTD   80 (110)
T ss_dssp             HHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC----TTCC----CCCH
T ss_pred             HHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh----hcCC----CCCH
Confidence            45667788  8999999999988752  456788999999999 69999999999976665421    0121    1235


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..     +|.|+.+||+.++.
T Consensus        81 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           81 AETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            556666643     68999999999774

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.58  E-value=7.3e-07  Score=72.22  Aligned_cols=114  Identities=11%  Similarity=0.102  Sum_probs=80.2

Q ss_pred             chHHHHHHHHHHcC----CCCcCCCCCCCHHH-HHHHHHHHHHHHhhcCCCCCccChHHHHHHH----------------
Q psy4949           3 IDIWNVIEAFRENG----LNAIELQSDVSVAR-FETLLSSLYHNLNKRLPVSQQVHVEVLSGLL----------------   61 (275)
Q Consensus         3 vd~~~~~e~f~~~~----l~~~~~~~~l~~~~-l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~----------------   61 (275)
                      |+...+..+++..|    .+       .+..+ +..++..++..+-+.....+.|+.+++..++                
T Consensus        23 i~~~El~~~l~~~~~~~g~~-------~~~~~~~~~~~~~~~~~l~~~~D~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~   95 (174)
T 1q80_A           23 ITRMDFESMAERFAKESEMK-------AEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGP   95 (174)
T ss_dssp             ESHHHHHHHHHHHHHHSSCC-------TTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTTSTTCHHHHHTH
T ss_pred             EeHHHHHHHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHHHhcCCCCeEcHHHHHHHHHHHcCcccHHHHHHHH
Confidence            44455555555544    33       23334 5555544444443333233566666655443                


Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +..+|+.||++++|.|+..||+.++..+  |-..+.++.+|+.+ .|++|.|+.+||..+++..+
T Consensus        96 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~--g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~  158 (174)
T 1q80_A           96 LPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFF  158 (174)
T ss_dssp             HHHHHHHHCTTSSSSBCHHHHHHHHHHH--TCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHHHh
Confidence            3458999999999999999999999988  66677889999999 69999999999999998765

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=98.58  E-value=2.6e-08  Score=75.67  Aligned_cols=90  Identities=14%  Similarity=0.189  Sum_probs=66.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.+|+.++..  .....++++.+|+.+ .|++|.|++.||..+|+.+..    .|.    ..++
T Consensus        12 ~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~----~g~----~~~~   79 (108)
T 1rro_A           12 AAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS----DAR----ELTE   79 (108)
T ss_dssp             HHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT----TSC----CCCH
T ss_pred             HHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh----ccC----CCCH
Confidence            45667788  8999999999988752  356678899999999 699999999999766653210    021    1245


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++.+|..     +|.|+.+||+..+.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           80 SETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            556666653     68999999999763

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.58  E-value=2.3e-07  Score=75.69  Aligned_cols=101  Identities=9%  Similarity=0.139  Sum_probs=72.9

Q ss_pred             HHHHHHhh-cCCCCCeeehHHHHHHHHHhc----CCChhhHHH-----------Hhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAY-SVESLGRIRVFSIKVALATMC----SGKLMDKLR-----------YIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~f-D~~~~G~I~~~ef~~aLs~Lc----~G~l~dKlr-----------~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.-+|+.| |.|++|.|++.||..++..+.    .+...+.+.           .+|+.+ .|++|.|+..||..++...
T Consensus        10 l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~   89 (185)
T 2sas_A           10 IKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKT   89 (185)
T ss_dssp             HHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHH
Confidence            45789999 999999999999999999887    343433343           349999 6999999999999888766


Q ss_pred             HhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         125 LAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       125 ~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..-.......  ....+..++.+|..     +|.||.+||..++.
T Consensus        90 ~~~~~~~~~~--~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~  132 (185)
T 2sas_A           90 IATCKSVADL--PAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCK  132 (185)
T ss_dssp             HHTCCSGGGS--CTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTT
T ss_pred             hccccchhhh--hHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHH
Confidence            4331000110  01134667777764     68999999999874

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.58  E-value=3.3e-07  Score=71.95  Aligned_cols=93  Identities=11%  Similarity=0.187  Sum_probs=75.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..++..++.....-+.          .+
T Consensus        14 ~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~----------~~   83 (147)
T 4ds7_A           14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND----------SE   83 (147)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH----------HH
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC----------cH
Confidence            4689999999999999999999999987777888899999999 689999999999888875433211          23


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..+..+|..     +|.|+.+||..++..
T Consensus        84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~  112 (147)
T 4ds7_A           84 QELLEAFKVFDKNGDGLISAAELKHVLTS  112 (147)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeECHHHHHHHHHH
Confidence            455566653     689999999998864

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=98.57  E-value=3.2e-07  Score=74.21  Aligned_cols=94  Identities=14%  Similarity=0.221  Sum_probs=76.5

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.||.+++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..||..++.....-..          .
T Consensus        30 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~----------~   99 (169)
T 3qrx_A           30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERD----------S   99 (169)
T ss_dssp             HHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHH----------H
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccC----------c
Confidence            45789999999999999999999999888777888999999999 789999999999888876432211          2


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +..+..+|..     +|.|+.+||..++..
T Consensus       100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~  129 (169)
T 3qrx_A          100 REEILKAFRLFDDDNSGTITIKDLRRVAKE  129 (169)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            3455556653     689999999998864

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.57  E-value=6.6e-08  Score=74.49  Aligned_cols=95  Identities=17%  Similarity=0.227  Sum_probs=73.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|++.+|..++..+......+.++.+|+.+ .|++|.|+..|+..++..+...        ....++
T Consensus         3 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~--------~~~~~~   74 (134)
T 1jfj_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ--------DLSDDK   74 (134)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCC--------SSHHHH
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccc--------ccCCCH
Confidence            4689999999999999999999999887778888999999999 6999999999997655321000        011123


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..++.+|..     +|.|+.+||...+..
T Consensus        75 ~~~~~~f~~~D~d~~G~i~~~e~~~~l~~  103 (134)
T 1jfj_A           75 IGLKVLYKLMDVDGDGKLTKEEVTSFFKK  103 (134)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHH
Confidence            346666764     689999999998864

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.54  E-value=9.9e-08  Score=87.78  Aligned_cols=99  Identities=10%  Similarity=0.106  Sum_probs=73.3

Q ss_pred             CccChHHHHHHH---------HHH-HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHH
Q psy4949          50 QQVHVEVLSGLL---------LNW-LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFN  118 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~-lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~  118 (275)
                      |.|+.++...++         +.- +++.+|.+++|.|++.+|...+..+.      .++.+|+.| .|++|.||..+|.
T Consensus       203 G~Is~~El~~~l~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~~F~~~D~d~dG~Is~~El~  276 (323)
T 1ij5_A          203 GTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILYAFADFDKSGQLSKEEVQ  276 (323)
T ss_dssp             SEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHHHHTCSSSCSSEEHHHHH
T ss_pred             CcCcHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHHHHHHhCCCCCCCccHHHHH
Confidence            456655554443         344 88999999999999999999988776      899999999 6999999999998


Q ss_pred             HHH-HHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949         119 EYL-QDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       119 ~~L-~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      .+| +.+       |+..    ++..++.+|.     ++|.|+.+||+..+..
T Consensus       277 ~~l~~~~-------g~~l----s~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~  318 (323)
T 1ij5_A          277 KVLEDAH-------IPES----ARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL  318 (323)
T ss_dssp             HHHHHTT-------CCGG----GCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred             HHHHHHc-------CCCC----CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            888 432       3211    2223444443     3789999999998753

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.53  E-value=2.7e-07  Score=93.59  Aligned_cols=119  Identities=13%  Similarity=0.285  Sum_probs=81.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..|+..|+..+|..++..- ++.+ +...+.++     +.-+++.+|.|++|+|++.||+..+..+      ++++.+|
T Consensus       545 dG~Is~~El~~~L~~l~~~~-~~~~-g~~~s~~~-----~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F  611 (714)
T 3bow_A          545 DAEISAFELQTILRRVLAKR-EDIK-SDGFSIET-----CKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIY  611 (714)
T ss_dssp             GTSBCHHHHHHHHHHHHTTC-TTSC-CSCCCHHH-----HHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHhhhc-cccc-CCCCCHHH-----HHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHH
Confidence            45677777666666554211 1111 11223232     2457889999999999999999988865      8899999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh----cCCCcccHHHHHHHHhc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF----SGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF----~~d~~Is~~eFl~~~~~  165 (275)
                      +.+ .|++|.|+.+||..+|+.+       |..    .+++.++.+|    .++|.|+.+||+..+..
T Consensus       612 ~~~D~d~dG~Is~~El~~~L~~~-------G~~----ls~~~~~~l~~~~Dd~dG~Isf~EF~~~l~~  668 (714)
T 3bow_A          612 REIDVDRSGTMNSYEMRKALEEA-------GFK----LPCQLHQVIVARFADDELIIDFDNFVRCLVR  668 (714)
T ss_dssp             HHHCTTCCSSEEHHHHHHHHHHT-------TEE----CCHHHHHHHHHHHSCTTCEECHHHHHHHHHH
T ss_pred             HHhCCCCCCeECHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCeEcHHHHHHHHHH
Confidence            999 6999999999999888753       211    1233344433    34689999999987754

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=98.51  E-value=5.9e-07  Score=71.47  Aligned_cols=93  Identities=14%  Similarity=0.215  Sum_probs=72.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|+|+..+|+.+|..+-.....+.+..+|+.+ .|++|.|+..+|..++.....-.          .++
T Consensus         9 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~----------~~~   78 (143)
T 2obh_A            9 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEK----------DTK   78 (143)
T ss_dssp             HHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHH----------HHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccc----------cHH
Confidence            4689999999999999999999999886666777889999998 68999999999987765432110          023


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..+...|..     +|.|+.+||..++..
T Consensus        79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~  107 (143)
T 2obh_A           79 EEILKAFKLFDDDETGKISFKNLKRVAKE  107 (143)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            345555543     689999999998854

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.50  E-value=2e-08  Score=76.36  Aligned_cols=90  Identities=17%  Similarity=0.175  Sum_probs=67.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+++.+|  ++|.|++.+|+.++..  .....++++.+|+.+ .|++|.|++.+|..+|+.+..    .|...    ++
T Consensus        12 ~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~----~g~~~----~~   79 (108)
T 2kyc_A           12 AAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES----GARVL----TA   79 (108)
T ss_dssp             HHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSS----SCCCC----CT
T ss_pred             HHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh----ccCCC----CH
Confidence            45667888  8999999999998752  356778999999999 699999999999888876421    12211    23


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..     +|.|+.+||+..+.
T Consensus        80 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           80 SETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             TTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            345555543     68999999999763

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=98.50  E-value=6.5e-07  Score=71.29  Aligned_cols=93  Identities=13%  Similarity=0.202  Sum_probs=73.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..|+..++.....-.          ..+
T Consensus        13 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~----------~~~   82 (148)
T 1exr_A           13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ----------DSE   82 (148)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH----------HHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCC----------CcH
Confidence            3678999999999999999999999887777788899999999 69999999999987776432211          023


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..+...|..     +|.|+.+||..++..
T Consensus        83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~  111 (148)
T 1exr_A           83 EELIEAFKVFDRDGNGLISAAELRHVMTN  111 (148)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            445555653     689999999998864

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=98.49  E-value=3.5e-07  Score=69.47  Aligned_cols=73  Identities=8%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             CccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHh---cCCChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATM---CSGKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~L---c~G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+.+++..++         +..+|+.||.+++|.|+..|++.+|..+   ...-..+.++.+|+.+ .|++|.|+.+|
T Consensus        23 g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~E  102 (109)
T 3fs7_A           23 DSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE  102 (109)
T ss_dssp             TCCCHHHHHHHHTCTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHH
T ss_pred             CcCcHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence            456666655543         5579999999999999999999999888   4445677789999999 69999999999


Q ss_pred             HHHHHH
Q psy4949         117 FNEYLQ  122 (275)
Q Consensus       117 l~~~L~  122 (275)
                      |..+++
T Consensus       103 F~~~~~  108 (109)
T 3fs7_A          103 FQSLVK  108 (109)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            987764

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.49  E-value=7.5e-07  Score=71.22  Aligned_cols=114  Identities=14%  Similarity=0.187  Sum_probs=79.2

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHH------------HHHHHhhcCCCCCccChHHHHHHHH-----------
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSS------------LYHNLNKRLPVSQQVHVEVLSGLLL-----------   62 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~------------lY~~~~k~~P~~~~v~~~~~~~l~~-----------   62 (275)
                      ..+.++|+....+.  ++..|+..++..+|..            ++..+-.+  ..+.|+.+++..++.           
T Consensus        18 ~~l~~~F~~~D~~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~--~~g~i~~~eF~~~~~~~~~~~~~~~~   93 (161)
T 1dtl_A           18 NEFKAAFDIFVLGA--EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED--GSGTVDFDEFLVMMVRSMKDDSKGKS   93 (161)
T ss_dssp             HHHHHHHHHHTTTC--GGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTT--SSSSBCHHHHHHHHHHHHC-----CH
T ss_pred             HHHHHHHHHHcCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC--CCCeEcHHHHHHHHHHHhcccccchH
Confidence            34445555544331  1345666666665543            44444333  236788887766653           


Q ss_pred             ----HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 ----NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ----~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                          ..+|+.||.+++|.|+..+|+.++..+...-..+.++.+|+.+ .|++|.|+..||..++..
T Consensus        94 ~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A           94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence                3479999999999999999999998765455677789999999 699999999999887753

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=98.47  E-value=7.3e-07  Score=71.17  Aligned_cols=103  Identities=10%  Similarity=0.089  Sum_probs=79.9

Q ss_pred             ccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchh
Q psy4949          51 QVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPA  129 (275)
Q Consensus        51 ~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~  129 (275)
                      .++.++-..  +.-+|+.||.+++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..+|..++.....-. 
T Consensus        16 ~l~~~~~~~--l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~-   92 (161)
T 3fwb_A           16 ELLEEQKQE--IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR-   92 (161)
T ss_dssp             TSCHHHHHH--HHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC-
T ss_pred             CCCHHHHHH--HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC-
Confidence            344444433  34689999999999999999999999987777778899999999 78999999999988877543221 


Q ss_pred             hccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         130 AVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       130 ~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                               ..+..+..+|..     +|.|+.+||...+..
T Consensus        93 ---------~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~  124 (161)
T 3fwb_A           93 ---------DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE  124 (161)
T ss_dssp             ---------CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             ---------CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH
Confidence                     134556666663     589999999998864

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.47  E-value=5.7e-07  Score=73.51  Aligned_cols=93  Identities=14%  Similarity=0.214  Sum_probs=75.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|+..+|+.+|..+......+.++.+|+.+ .|++|.|+..||..++.....-.          ..+
T Consensus        14 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~----------~~~   83 (179)
T 2f2o_A           14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT----------DSE   83 (179)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH----------HHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCc----------ccH
Confidence            4688999999999999999999999887777788899999999 79999999999988876543211          023


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..+..+|..     +|.|+.+||..++..
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~  112 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTN  112 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            455666653     689999999998864

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=98.46  E-value=2.7e-06  Score=66.96  Aligned_cols=97  Identities=11%  Similarity=0.200  Sum_probs=71.9

Q ss_pred             CCCCCHHHHHHHHH------------HHHHHHhhcCCCCCccChHHHHHHH----------------HHHHHHhhcCCCC
Q psy4949          23 QSDVSVARFETLLS------------SLYHNLNKRLPVSQQVHVEVLSGLL----------------LNWLLSAYSVESL   74 (275)
Q Consensus        23 ~~~l~~~~l~~~L~------------~lY~~~~k~~P~~~~v~~~~~~~l~----------------~~~lf~~fD~~~~   74 (275)
                      +..|+..++..+|.            .++..+-..  ..+.|+.+++..++                +..+|+.||.+++
T Consensus        25 ~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~  102 (153)
T 3ox6_A           25 DGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN--LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGD  102 (153)
T ss_dssp             SSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTT--STTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCS
T ss_pred             CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC--CCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCC
Confidence            34566666655544            445555443  23578888877665                4468999999999


Q ss_pred             CeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          75 GRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        75 G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                      |.|+..+|+.+|..+.+ .-..+.+..+|+.+ .|++|.|+..||..++
T Consensus       103 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  151 (153)
T 3ox6_A          103 GEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM  151 (153)
T ss_dssp             SSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred             CcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            99999999999998444 44556779999999 6899999999997654

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.46  E-value=2.1e-06  Score=69.27  Aligned_cols=114  Identities=13%  Similarity=0.121  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHH-H--------HhhcCCCCCccChHHHHHHHH------------H
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYH-N--------LNKRLPVSQQVHVEVLSGLLL------------N   63 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~-~--------~~k~~P~~~~v~~~~~~~l~~------------~   63 (275)
                      +..+.++|+....+   .+..|+..++..+|..+-. .        +-+..  .+.|+.+++..++.            .
T Consensus        24 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~--dg~i~~~eF~~~~~~~~~~~~~~~~l~   98 (166)
T 2mys_B           24 IEDFKEAFTVIDQN---ADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA--SGPINFTVFLTMFGEKLKGADPEDVIM   98 (166)
T ss_pred             HHHHHHHHHHHCCC---CCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC--CCCcCHHHHHHHHHHHhccCCcHHHHH
Confidence            34455666665533   3567888887777765532 1        11122  35788777766544            3


Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .+|+.||.+++|.|+..+|+.+|..+...-..+.+..+|+.+ .|++|.|+..||..++..
T Consensus        99 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           99 GAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             HHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            479999999999999999999999875555667789999999 689999999999887764

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=98.46  E-value=3.3e-07  Score=63.12  Aligned_cols=61  Identities=13%  Similarity=0.254  Sum_probs=54.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ..+|+.||.+++|.|+..+|+.++..+......+.++.+|+.+ .|++|.|+..||..+++.
T Consensus         4 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4689999999999999999999999887677788899999999 699999999999887753

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.45  E-value=2.2e-06  Score=70.60  Aligned_cols=112  Identities=13%  Similarity=0.290  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHH-------------HHHHhhcCCCCCccChHHHHHHH----------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSL-------------YHNLNKRLPVSQQVHVEVLSGLL----------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~l-------------Y~~~~k~~P~~~~v~~~~~~~l~----------   61 (275)
                      |..+.+.|...     +.+..|+..++..++..+             |..+-++  ..+.|+.+++...+          
T Consensus        27 i~~~f~~fd~~-----~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~g~i~~~ef~~~~~~~~~~~~~~   99 (190)
T 1g8i_A           27 VQQWYKGFIKD-----CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDEN--KDGRIEFSEFIQALSVTSRGTLDE   99 (190)
T ss_dssp             HHHHHHHHHHH-----CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHHHHHCCHHH
T ss_pred             HHHHHHHHHHh-----CCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcC--CCCeEeHHHHHHHHHHhcCCCHHH
Confidence            34444555544     124568888887776654             4444333  23578877776554          


Q ss_pred             -HHHHHHhhcCCCCCeeehHHHHHHHHHhc------------CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 -LNWLLSAYSVESLGRIRVFSIKVALATMC------------SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 -~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------------~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                       +..+|+.||.+++|.|++.||+.++..+.            .....+.++.+|+.+ .|++|.|+..||..++..
T Consensus       100 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~  175 (190)
T 1g8i_A          100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  175 (190)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence             34689999999999999999999998752            124566789999999 699999999999888764

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=98.45  E-value=1.4e-06  Score=66.03  Aligned_cols=73  Identities=8%  Similarity=0.081  Sum_probs=58.9

Q ss_pred             CccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+.+++..++         +..+|+.||.+++|.|+..+|+.+|..+.   .....+.++.+|+.+ .|++|.|+..|
T Consensus        23 g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~e  102 (109)
T 1bu3_A           23 DSFNYKAFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE  102 (109)
T ss_dssp             TCCCHHHHHHHHTGGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHH
T ss_pred             CcCcHHHHHHHHHcChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            456655555443         45789999999999999999999999884   335677889999999 69999999999


Q ss_pred             HHHHHH
Q psy4949         117 FNEYLQ  122 (275)
Q Consensus       117 l~~~L~  122 (275)
                      |..+++
T Consensus       103 F~~~~~  108 (109)
T 1bu3_A          103 WAALVK  108 (109)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            987664

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.44  E-value=5e-07  Score=92.65  Aligned_cols=87  Identities=11%  Similarity=0.123  Sum_probs=70.0

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      ++.+|+.||.|++|+|+|.||+..+.... .+...++++.+|+.|.|++|.|+..+|..+|.                  
T Consensus       763 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~~d~~G~Is~~El~~~l~------------------  824 (863)
T 1sjj_A          763 FARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELP------------------  824 (863)
T ss_dssp             HHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGGGTSSSEEEHHHHHHHSC------------------
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCcCcHHHHHHHCC------------------
Confidence            45688999999999999999999988765 35677899999999999999999999987763                  


Q ss_pred             hHHHhhhhc----------CCCcccHHHHHHHHhcC
Q psy4949         141 DTLAQEIFS----------GNGKVTVNDFMDTMMSE  166 (275)
Q Consensus       141 e~~v~~cF~----------~d~~Is~~eFl~~~~~d  166 (275)
                      +..++.+|.          +||.|+.+||+..+.+.
T Consensus       825 ~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~  860 (863)
T 1sjj_A          825 PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGE  860 (863)
T ss_dssp             HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred             HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence            122333332          36899999999988654

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.43  E-value=2.8e-06  Score=67.13  Aligned_cols=60  Identities=12%  Similarity=0.070  Sum_probs=51.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||++++|.|+..+|+.+|..+...-..+.++.+|+.+ |++|.|+..+|..++.
T Consensus        86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~-d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           86 LIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF-SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH-CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc-CCCCcCcHHHHHHHHh
Confidence            34689999999999999999999999875445567789999999 9999999999987663

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.43  E-value=4.9e-06  Score=71.78  Aligned_cols=111  Identities=15%  Similarity=0.263  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHH-------------HHHHHHhhcCCCCCccChHHHHHHH----------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLS-------------SLYHNLNKRLPVSQQVHVEVLSGLL----------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~-------------~lY~~~~k~~P~~~~v~~~~~~~l~----------   61 (275)
                      |..+.++|...     +.+..|+..++..++.             .+|..+-++  ..+.|+.+++...+          
T Consensus        53 i~~l~~~Fd~~-----d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d--~~G~I~~~Ef~~~l~~~~~~~~~~  125 (224)
T 1s1e_A           53 LQVLYRGFKNE-----CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTT--QTGSVKFEDFVTALSILLRGTVHE  125 (224)
T ss_dssp             HHHHHHHHHHH-----CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHHHHCCHHH
T ss_pred             HHHHHHHHHhh-----CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCC--CCCcEeHHHHHHHHHHHccCCHHH
Confidence            44455566553     2355688888776654             344444433  23678887776654          


Q ss_pred             -HHHHHHhhcCCCCCeeehHHHHHHHHHhc------------CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 -LNWLLSAYSVESLGRIRVFSIKVALATMC------------SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 -~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------------~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                       +.++|+.||.|++|.|+..||+.++..+.            .....+..+.+|+.+ .|++|.|+.+||..++.
T Consensus       126 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  200 (224)
T 1s1e_A          126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ  200 (224)
T ss_dssp             HHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence             45789999999999999999999997652            223457789999999 69999999999987765

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.42  E-value=2.2e-06  Score=71.64  Aligned_cols=86  Identities=15%  Similarity=0.260  Sum_probs=66.7

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHHhc-------CCChhh
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALATMC-------SGKLMD   96 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-------~G~l~d   96 (275)
                      +..+|..+-++.  .+.|+.+++..++           +..+|+.||.+++|.|++.||+.++..+.       .-+.++
T Consensus        54 ~~~~f~~~D~d~--~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~  131 (198)
T 2r2i_A           54 VEQMFETFDFNK--DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEE  131 (198)
T ss_dssp             HHHHHHHHCTTC--SSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHH
T ss_pred             HHHHHHHHCCCC--CCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHH
Confidence            455565554442  3578877776654           35789999999999999999999998774       234456


Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .++.+|+.+ .|++|.|+..||..++.
T Consensus       132 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A          132 FTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            689999999 69999999999987765

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.42  E-value=2.5e-06  Score=73.80  Aligned_cols=111  Identities=17%  Similarity=0.251  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHH-------------HHHHHhhcCCCCCccChHHHHHHH----------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSS-------------LYHNLNKRLPVSQQVHVEVLSGLL----------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~-------------lY~~~~k~~P~~~~v~~~~~~~l~----------   61 (275)
                      +..+.+.|+.     .+++..|+..++..++..             +|..+-++  ..+.|+.+++...+          
T Consensus        66 i~~l~~~F~~-----~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d--~~G~I~~~Ef~~~l~~~~~~~~~~  138 (229)
T 3dd4_A           66 LQILYRGFKN-----ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTD--HNGAVSFEDFIKGLSILLRGTVQE  138 (229)
T ss_dssp             HHHHHHHHHT-----TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSS--CCSSCCHHHHHHHHHHHHHSCHHH
T ss_pred             HHHHHHHHHh-----hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCC--CCCeEeHHHHHHHHHHHcCCChHH
Confidence            3445556655     245678999998887765             33333322  24678877776554          


Q ss_pred             -HHHHHHhhcCCCCCeeehHHHHHHHHHhc------------CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 -LNWLLSAYSVESLGRIRVFSIKVALATMC------------SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 -~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------------~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                       +.++|+.||.|++|.|+..||+.++..+.            .....+..+.+|+.+ .|+||.|+.+||..+++
T Consensus       139 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  213 (229)
T 3dd4_A          139 KLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ  213 (229)
T ss_dssp             HHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence             45799999999999999999999998762            234567789999999 69999999999987775

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=98.42  E-value=1.8e-06  Score=65.30  Aligned_cols=61  Identities=10%  Similarity=0.108  Sum_probs=52.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||++++|.|+..+|+.+|..+.   .....+.++.+|+.+ .|++|.|+..||..+++
T Consensus        43 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 1rwy_A           43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             HHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            45789999999999999999999999884   335567789999999 68999999999987765

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.41  E-value=2.1e-06  Score=72.01  Aligned_cols=113  Identities=10%  Similarity=0.182  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHH-----------HHHHHhhcCCCCCccChHHHHHHH----------HH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSS-----------LYHNLNKRLPVSQQVHVEVLSGLL----------LN   63 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~-----------lY~~~~k~~P~~~~v~~~~~~~l~----------~~   63 (275)
                      +..+.++|+...-+   .+..|+..|+..++..           ++..+-.+  ..+.|+.+++...+          +.
T Consensus        51 ~~~l~~~F~~~D~d---~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d--~~g~i~~~EF~~~~~~~~~~~~~~l~  125 (191)
T 3k21_A           51 VEKLKSTFLVLDED---GKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSD--GSGKIDYTEFIAAALDRKQLSKKLIY  125 (191)
T ss_dssp             HHHHHHHHHHHCTT---CSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTT--CSSSEEHHHHHHHHSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHhhhhccHHHHH
Confidence            34455666665543   3566888887777743           44444333  23578888877765          45


Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCC-Chh----hHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSG-KLM----DKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~----dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .+|+.||.|++|.|+..||+.++.....| .+.    +.+..+|+.+ .|++|.|+.+||..+++
T Consensus       126 ~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          126 CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             HHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            68999999999999999999999875433 333    3588999998 69999999999987663

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.40  E-value=9.6e-07  Score=74.17  Aligned_cols=92  Identities=13%  Similarity=0.140  Sum_probs=73.9

Q ss_pred             HHHHHhhcCC-CCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          63 NWLLSAYSVE-SLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        63 ~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      .-+|+.||.+ ++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..||..++..+..           ..+
T Consensus        25 ~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~-----------~~~   93 (204)
T 1jba_A           25 QEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR-----------GTL   93 (204)
T ss_dssp             HHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSS-----------CCC
T ss_pred             HHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHcc-----------CCH
Confidence            4688999999 999999999999999776666677889999999 699999999999888875411           123


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++.++.+|..     +|.|+.+||..++..
T Consensus        94 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~  123 (204)
T 1jba_A           94 EHKLKWTFKIYDKDRNGCIDRQELLDIVES  123 (204)
T ss_dssp             THHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4556666653     689999999998754

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=98.39  E-value=2.8e-06  Score=68.14  Aligned_cols=98  Identities=10%  Similarity=0.203  Sum_probs=71.3

Q ss_pred             CCCCCHHHHHHHHHHH------------HHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeee
Q psy4949          23 QSDVSVARFETLLSSL------------YHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIR   78 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~l------------Y~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~   78 (275)
                      +..|+..++..+++.+            +..+-..  ..+.++.+++...+            +..+|+.||.+++|.|+
T Consensus        24 ~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~  101 (148)
T 2lmt_A           24 TGKIATRELGTLMRTLGQNPTEAELQDLIAEAENN--NNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFIS  101 (148)
T ss_dssp             CCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTT--STTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEEC
T ss_pred             CCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccC--CCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCc
Confidence            4556666765555433            2222222  22456666655443            33579999999999999


Q ss_pred             hHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          79 VFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        79 ~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ..||+.+|..+...-..+.+..+|+.+ .|++|.|+..||..++.
T Consensus       102 ~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A          102 PAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            999999999887777777889999999 79999999999977663

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=98.39  E-value=1.2e-06  Score=66.41  Aligned_cols=61  Identities=11%  Similarity=0.104  Sum_probs=52.3

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+.   .....+..+.+|+.+ .|++|.|+..||..+++
T Consensus        43 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            45799999999999999999999998873   335667789999999 68999999999987764

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.38  E-value=3.5e-06  Score=70.15  Aligned_cols=113  Identities=13%  Similarity=0.187  Sum_probs=80.7

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHH------------HHHHHHhhcCCCCCccChHHHHHHH-----------HHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLS------------SLYHNLNKRLPVSQQVHVEVLSGLL-----------LNW   64 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~------------~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~   64 (275)
                      +-++|+....+   .+..|+..++..+|.            .++..+-++  ..+.|+.+++..++           +..
T Consensus        39 l~~~F~~~D~d---~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~ef~~~~~~~~~~~~~~~~~~  113 (204)
T 3e3r_A           39 LARFFRQLDRD---GSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRN--GSGTLDLEEFLRALRPPMSQAREAVIAA  113 (204)
T ss_dssp             -CHHHHHHCTT---CCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTT--CSSSBCHHHHHHHTSCCCCHHHHHHHHH
T ss_pred             HHHHHHHHccC---CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccC--CCCcCcHHHHHHHHHhhcCchHHHHHHH
Confidence            33455544433   355677777766554            455555333  23678888776654           557


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHh-------cCCChhhHHHHhchhh-c-cCCCceeHHHHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATM-------CSGKLMDKLRYIFSQL-C-DCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~L-------c~G~l~dKlr~~F~ly-~-D~nG~i~~~el~~~L~~i~  125 (275)
                      +|+.||.+++|.|++.||+.++..+       -....++-++.+|+.+ . |++|.|+..||..+++.+.
T Consensus       114 ~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~  183 (204)
T 3e3r_A          114 AFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS  183 (204)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred             HHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence            9999999999999999999998733       2234456689999999 5 9999999999999998763

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.37  E-value=4.6e-06  Score=65.26  Aligned_cols=105  Identities=14%  Similarity=0.174  Sum_probs=76.9

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH-------------HHHHHHhh
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL-------------LNWLLSAY   69 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~-------------~~~lf~~f   69 (275)
                      |+...+..+++..|.+       ++..++..+    +.. +    ..+.|+.+++..++             +..+|+.|
T Consensus        22 i~~~e~~~~l~~~~~~-------~~~~~~~~~----~~~-~----~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~   85 (145)
T 2bl0_B           22 VSIEELGSALRSLGKN-------PTNAELNTI----KGQ-L----NAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRAL   85 (145)
T ss_dssp             EEGGGHHHHHHHTTCC-------CCHHHHHHH----HHH-H----TSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhCCC-------CCHHHHHHH----HHh-c----CCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHh
Confidence            4556667777777654       344554443    333 2    12567766665443             35689999


Q ss_pred             cCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          70 SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        70 D~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      |.+++|.|+..+|+.+|..+...-..+.++.+|+.+ .|++|.|+..||..++..
T Consensus        86 D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           86 DKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999875445667789999999 689999999999888764

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.37  E-value=2.8e-06  Score=67.79  Aligned_cols=107  Identities=12%  Similarity=0.141  Sum_probs=78.6

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH---------------HHHHHH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL---------------LNWLLS   67 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~---------------~~~lf~   67 (275)
                      |+...+..+++..|++       ++..+    +..++..+-...  .+.|+.+++..++               +..+|+
T Consensus        37 i~~~e~~~~l~~~~~~-------~~~~~----~~~~~~~~d~~~--~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~  103 (162)
T 1top_A           37 ISTKELGTVMRMLGQN-------PTKEE----LDAIIEEVDEDG--SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFR  103 (162)
T ss_dssp             EEGGGHHHHHHHTTCC-------CCHHH----HHHHHHHHCTTS--CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCC-------CCHHH----HHHHHHHHcCCC--CCcEeHHHHHHHHHHHhccccccccHHHHHHHHH
Confidence            4555666777776654       23344    555666664432  2567766665543               345799


Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .||.+++|.|+..+|+.+|..+...-..+.+..+|+.+ .|++|.|+..||..++.
T Consensus       104 ~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  159 (162)
T 1top_A          104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME  159 (162)
T ss_dssp             HHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            99999999999999999998765556667889999999 68999999999988775

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.37  E-value=2.4e-06  Score=69.09  Aligned_cols=61  Identities=16%  Similarity=0.195  Sum_probs=53.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|++.+|+.++..+  |-..+.++.+|+.+ .|++|.|+..||..+++..
T Consensus       104 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~--g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~  165 (176)
T 1nya_A          104 VKGIVGMCDKNADGQINADEFAAWLTAL--GMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDF  165 (176)
T ss_dssp             HHHHHHHTCSSCCSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHh--CCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            4568999999999999999999999876  36677889999999 6999999999998877653

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.37  E-value=9.3e-07  Score=72.90  Aligned_cols=92  Identities=14%  Similarity=0.146  Sum_probs=72.2

Q ss_pred             HHHHHhhcCC-CCCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSVE-SLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+|+.||.+ ++|+|++.||..++..+- .+...+.++.+|+.+ .|++|.|+..|+..++..+       +.    ..
T Consensus        28 ~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~-------~~----~~   96 (190)
T 1fpw_A           28 QQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTT-------SR----GT   96 (190)
T ss_dssp             HHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHH-------SC----CC
T ss_pred             HHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHH-------cc----CC
Confidence            4678899987 999999999999999874 345667789999999 6999999999998887754       11    12


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|..     +|.|+.+||..++..
T Consensus        97 ~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~  127 (190)
T 1fpw_A           97 LEEKLSWAFELYDLNHDGYITFDEMLTIVAS  127 (190)
T ss_dssp             STHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            34556666653     689999999998754

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.37  E-value=2.1e-06  Score=70.94  Aligned_cols=101  Identities=9%  Similarity=0.102  Sum_probs=73.1

Q ss_pred             HHHHHHhh-cCCCCCeeehHHHHHHHHHhc----CCChhhHHHHhc-----------hhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAY-SVESLGRIRVFSIKVALATMC----SGKLMDKLRYIF-----------SQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~f-D~~~~G~I~~~ef~~aLs~Lc----~G~l~dKlr~~F-----------~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.| |.|++|.|+..||..++..+.    .....+.++.+|           +.+ .|++|.|+.+|+..++...
T Consensus        14 l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~   93 (191)
T 2ccm_A           14 ILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAEC   93 (191)
T ss_dssp             HHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHHH
Confidence            45789999 999999999999999999883    334456667676           777 6899999999998888764


Q ss_pred             HhchhhccCCCCCCC-chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         125 LAIPAAVLESPSFSY-TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       125 ~~i~~~~gE~~~f~~-~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..-+.   ....+.. .+..++.+|..     +|.|+.+||..++..
T Consensus        94 ~~~~~---~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~  137 (191)
T 2ccm_A           94 VKSVE---KGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS  137 (191)
T ss_dssp             HHHHH---TTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred             hcccc---chhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            32110   0111111 24566777763     689999999998853

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=98.37  E-value=2.3e-06  Score=67.53  Aligned_cols=107  Identities=17%  Similarity=0.216  Sum_probs=74.4

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCccChHHHHHHHH-----------------HH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNL-NKRLPVSQQVHVEVLSGLLL-----------------NW   64 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~-~k~~P~~~~v~~~~~~~l~~-----------------~~   64 (275)
                      |+...+..+++..|.+.       +..+    +..++..+ -..  ..+.|+.+++..++.                 ..
T Consensus        21 i~~~el~~~l~~~g~~~-------~~~~----~~~l~~~~~D~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~   87 (148)
T 1m45_A           21 IAKDSLGDYLRAIGYNP-------TNQL----VQDIINADSSLR--DASSLTLDQITGLIEVNEKELDATTKAKTEDFVK   87 (148)
T ss_dssp             EEGGGHHHHHHHTTCCC-------CHHH----HHHHHHC--CC----CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHH
T ss_pred             CCHHHHHHHHHHhCCCC-------CHHH----HHHHHHHhhCCC--CCCeEcHHHHHHHHHHHHhhccccccccHHHHHH
Confidence            45556667777776542       3334    44444444 222  124566666554443                 34


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +|+.||++++|.|+..+|+.+|..+...-..+.+..+|+.+ .|++|.|+..||..++.
T Consensus        88 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           88 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             HHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            79999999999999999999999875445567789999999 68999999999987764

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=98.37  E-value=1.4e-06  Score=61.77  Aligned_cols=63  Identities=13%  Similarity=0.191  Sum_probs=55.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+......+.++.+|+.+ .|++|.|+..+|..++...
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   72 (77)
T 2joj_A            9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK   72 (77)
T ss_dssp             HHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            45789999999999999999999999987667788899999999 6899999999998877654

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=98.36  E-value=1.5e-06  Score=65.84  Aligned_cols=61  Identities=13%  Similarity=0.134  Sum_probs=51.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+.   .....+.++.+|+.+ .|++|.|+..||..+++
T Consensus        43 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            45799999999999999999999998774   234567789999999 68999999999987654

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.36  E-value=7.8e-07  Score=69.86  Aligned_cols=103  Identities=16%  Similarity=0.243  Sum_probs=74.6

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhc
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYS   70 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD   70 (275)
                      |+...+..+++..|.+.       +..++..++..         . .+.|+.+++..++            +..+|+.||
T Consensus        24 i~~~el~~~l~~~g~~~-------~~~~~~~~~~~---------~-~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D   86 (143)
T 3j04_B           24 IDKEDLHDMLASMGKNP-------TDEYLEGMMSE---------A-PGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFD   86 (143)
T ss_dssp             CCHHHHHHHHHHTSCCC-------CHHHHHTTTTT---------S-SSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSC
T ss_pred             cCHHHHHHHHHHhCCCC-------CHHHHHHHHHh---------C-CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHC
Confidence            56677778888877653       33332222221         1 2455555544443            346899999


Q ss_pred             CCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          71 VESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        71 ~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ++++|.|+..||+.+|..+...-..+.+..+|+.+ .|++|.|+..||..+++
T Consensus        87 ~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  139 (143)
T 3j04_B           87 EEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK  139 (143)
T ss_dssp             SSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred             CCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            99999999999999999775556677889999999 69999999999987775

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.36  E-value=1.2e-06  Score=73.68  Aligned_cols=112  Identities=13%  Similarity=0.071  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHH--------HHHHhhcCCCCCccChHHHHHHHH------------HH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSL--------YHNLNKRLPVSQQVHVEVLSGLLL------------NW   64 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~l--------Y~~~~k~~P~~~~v~~~~~~~l~~------------~~   64 (275)
                      +..+.++|+...-+   .+..|+..++..+|..+        ...+....  .+.|+.+++..++.            ..
T Consensus        56 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~--~g~i~~~eF~~~~~~~~~~~~~~~~l~~  130 (196)
T 3dtp_E           56 VQEFKEAFQLIDQD---KDGFISKNDIRATFDSLGRLCTEQELDSMVAEA--PGPINFTMFLTIFGDRIAGTDEEDVIVN  130 (196)
T ss_dssp             HHHHHHHHHHHCCS---CSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS--SSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--cCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence            45566777766544   35678888887777653        22333333  36788888877764            36


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +|+.||.+++|.|+..+|+.+| .+...-..+.+..+|..+ .|++|.|+..+|..+|+
T Consensus       131 ~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~  188 (196)
T 3dtp_E          131 AFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT  188 (196)
T ss_dssp             HHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHS
T ss_pred             HHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHH
Confidence            8999999999999999999999 665556677789999999 69999999999977664

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=98.36  E-value=1.5e-06  Score=65.89  Aligned_cols=61  Identities=13%  Similarity=0.181  Sum_probs=52.3

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||++++|.|+..+|+.+|..+.   .....+.++.+|+.+ .|++|.|+..||..+++
T Consensus        44 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            45799999999999999999999998873   334567789999999 68999999999987765

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.35  E-value=3.6e-06  Score=70.67  Aligned_cols=116  Identities=11%  Similarity=0.153  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHH-----------HHHHHHhhcCCCCCccChHHHHHHH------------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLS-----------SLYHNLNKRLPVSQQVHVEVLSGLL------------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~-----------~lY~~~~k~~P~~~~v~~~~~~~l~------------   61 (275)
                      +..+.++|+...-+. +.+..|+..++..+|.           .+|..+-.+  ..+.|+.+++...+            
T Consensus        36 ~~~l~~~F~~~D~d~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D~d--~~g~i~~~Ef~~~~~~~~~~~~~~~~  112 (207)
T 2ehb_A           36 VEALYELFKKLSSSI-IDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVK--RNGVIEFGEFVRSLGVFHPSAPVHEK  112 (207)
T ss_dssp             HHHHHHHHHHHTTSS-SCSSCEEHHHHHHHHHSCTTCCCHHHHHHHHHHCTT--CSSEECHHHHHHHHGGGSTTSCHHHH
T ss_pred             HHHHHHHHHHhcccc-CCCCccCHHHHHHHHhccccccHHHHHHHHHHhcCC--CCCeEeHHHHHHHHHHHccCCCHHHH
Confidence            444566676655330 1356788889887763           366555443  23578877766554            


Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChh-----hHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLM-----DKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~-----dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +..+|+.||.+++|.|+..||+.++..+.   +..+.     +-++.+|+.+ .|++|.|+.+||..++..
T Consensus       113 l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  183 (207)
T 2ehb_A          113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL  183 (207)
T ss_dssp             HHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            45789999999999999999999986431   22332     2347788888 699999999999888765

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.34  E-value=1.7e-06  Score=69.20  Aligned_cols=63  Identities=17%  Similarity=0.130  Sum_probs=54.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +..+|+.||.+++|.|++.||+.++..+.  -..+.++.+|+.+ .|++|.|+..||..++...+.
T Consensus       100 ~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~  163 (166)
T 3akb_A          100 LHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFARYFT  163 (166)
T ss_dssp             HHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc
Confidence            45689999999999999999999998763  6677789999999 699999999999988876543

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.34  E-value=9.5e-07  Score=70.01  Aligned_cols=95  Identities=15%  Similarity=0.048  Sum_probs=71.8

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-cc--CCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CD--CNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D--~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+|+.||.+++|+|+..+|..+|..+-.....+.++.+|+.+ .|  ++|.|+..||..++........        ..
T Consensus        13 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~--------~~   84 (151)
T 1w7j_B           13 KEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG--------QG   84 (151)
T ss_dssp             HHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-------------
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC--------CC
Confidence            4689999999999999999999999886666678899999999 57  9999999999888875432110        01


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ....+..+|..     +|.|+.+||..++..
T Consensus        85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~  115 (151)
T 1w7j_B           85 TYEDYLEGFRVFDKEGNGKVMGAELRHVLTT  115 (151)
T ss_dssp             ---CCHHHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            12233445553     589999999998864

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.33  E-value=2.9e-06  Score=72.03  Aligned_cols=86  Identities=13%  Similarity=0.266  Sum_probs=66.5

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHHhc------CCChhhH
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALATMC------SGKLMDK   97 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------~G~l~dK   97 (275)
                      +..+|..+-.+.  .+.|+.+++..++           +..+|+.||.+++|.|++.||+.++..+.      .-..++.
T Consensus        59 ~~~~f~~~D~d~--dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~  136 (211)
T 2ggz_A           59 IDQVYNTFDTNK--DGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF  136 (211)
T ss_dssp             HHHHHHHHCTTC--SSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHH
T ss_pred             HHHHHHHHcCCC--CCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHH
Confidence            455666554432  3567777766554           45789999999999999999999998874      2244566


Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ++.+|+.+ .|++|.|+..||..++.
T Consensus       137 ~~~~f~~~D~d~dG~I~~~Ef~~~~~  162 (211)
T 2ggz_A          137 INLVFHKIDINNDGELTLEEFINGMA  162 (211)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            89999999 69999999999987775

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.33  E-value=2.9e-07  Score=63.42  Aligned_cols=60  Identities=20%  Similarity=0.268  Sum_probs=53.1

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ..+|+.||.+++|.|+..||+.++..+......+.++.+|+.+ .|++|.|+..||..+++
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            3579999999999999999999999886666677889999999 79999999999987765

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.33  E-value=1.1e-06  Score=72.65  Aligned_cols=115  Identities=16%  Similarity=0.170  Sum_probs=83.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCC-CCCeeehHHHHHHHHHhcC-CChhhHHHH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVE-SLGRIRVFSIKVALATMCS-GKLMDKLRY  100 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~  100 (275)
                      ...++..++..+...    +.   +     +.++     +.-+|+.||.+ ++|.|++.+|..++..+.. +...+.++.
T Consensus         5 ~~~l~~~el~~~~~~----~~---~-----~~~e-----l~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~   67 (190)
T 2l2e_A            5 QSKLSQDQLQDLVRS----TR---F-----DKKE-----LQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEY   67 (190)
T ss_dssp             SCCSCHHHHHHHHHH----HC---S-----CSHH-----HHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHH
T ss_pred             cccCCHHHHHHHHHh----cC---C-----CHHH-----HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHH
Confidence            456888886555444    21   1     2233     34678899999 8999999999999998743 467778899


Q ss_pred             hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         101 IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       101 ~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +|+.+ .|++|.|+..||..++..+       +.    ..++..++.+|..     +|.|+.+||...+..
T Consensus        68 ~f~~~D~d~~G~i~~~ef~~~~~~~-------~~----~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           68 VFNVFDADKNGYIDFKEFICALSVT-------SR----GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             HHHHHCSSSTTCEEHHHHHHHHTTS-------SC----SCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             HHHHhcCCCCCeEeHHHHHHHHHHH-------cC----CCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence            99999 6999999999997766431       11    2245566666653     689999999998754

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.33  E-value=5.8e-06  Score=65.89  Aligned_cols=107  Identities=12%  Similarity=0.129  Sum_probs=79.7

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH----------------HHHHH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL----------------LNWLL   66 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~----------------~~~lf   66 (275)
                      |+...+..+++..|.+       ++..+    +..++..+-...  .+.|+.+++..++                +..+|
T Consensus        31 i~~~e~~~~l~~~~~~-------~~~~~----~~~l~~~~D~~~--~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F   97 (158)
T 2jnf_A           31 VSTDQIGIILEVLGIQ-------QTKST----IRQLIDEFDPFG--NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAF   97 (158)
T ss_dssp             EEHHHHHHHHHHTTCS-------CSHHH----HHHHHHHHCTTC--CSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHH
T ss_pred             CcHHHHHHHHHHhCCC-------CCHHH----HHHHHHHhCCCC--CCcCcHHHHHHHHHHHhccccchhhHHHHHHHHH
Confidence            5667777788877654       23344    555666554432  3567877776665                44679


Q ss_pred             HhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          67 SAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        67 ~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +.||++++|.|+..+|+.+|..+-..-..+.++.+|+.+ .|++|.|+..||..++.
T Consensus        98 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  154 (158)
T 2jnf_A           98 RLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT  154 (158)
T ss_dssp             HHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            999999999999999999999775445567789999999 69999999999976553

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.33  E-value=1.9e-06  Score=70.68  Aligned_cols=92  Identities=15%  Similarity=0.193  Sum_probs=72.6

Q ss_pred             HHHHHhhcC-CCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSV-ESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~-~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+++.||. +++|.|++.+|..++..+... ...+.++.+|+.+ .|++|.|+..||..++..+..           +.
T Consensus        21 ~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-----------~~   89 (183)
T 1s6c_A           21 QVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR-----------GT   89 (183)
T ss_dssp             HHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH-----------CC
T ss_pred             HHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcC-----------CC
Confidence            356788887 899999999999999987644 5677789999999 699999999999888875432           11


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+..++.+|..     +|.|+.+||..++..
T Consensus        90 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  120 (183)
T 1s6c_A           90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKA  120 (183)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            34566666653     689999999998753

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.31  E-value=4.5e-06  Score=68.85  Aligned_cols=62  Identities=11%  Similarity=0.034  Sum_probs=50.1

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .+|+.||.+++|.|+..||+.+|..+-..-..+.++.+|+.+ .|++|.|+..||..++...+
T Consensus       117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  179 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFW  179 (195)
T ss_dssp             HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHc
Confidence            789999999999999999999998874434567789999999 69999999999988887654

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=98.29  E-value=2.3e-06  Score=71.35  Aligned_cols=107  Identities=17%  Similarity=0.246  Sum_probs=77.8

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhc
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYS   70 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD   70 (275)
                      |+...+..+++..|++.       +..+    +..++..+-.+  ..+.++.+++..++            +..+|++||
T Consensus        28 I~~~El~~~l~~lg~~~-------~~~~----~~~~~~~~d~d--~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD   94 (176)
T 2lhi_A           28 ISSSELATVMRSLGLSP-------SEAE----VNDLMNEIDVD--GNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFD   94 (176)
T ss_dssp             BCHHHHHHHHHHHTCCC-------CHHH----HHHHHTTTCSS--CSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHcCCCh-------hHHH----HHHHHHHhCcC--CCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhC
Confidence            67777888888888763       3344    44444433332  12345555444332            346899999


Q ss_pred             CCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          71 VESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        71 ~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      .+++|.|+..|++.+|..+...-.++-+..+|+.+.|+||.|+.+||..+|+
T Consensus        95 ~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~dd~dG~I~~~EF~~~m~  146 (176)
T 2lhi_A           95 KNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAALLS  146 (176)
T ss_dssp             SSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTTSSCBCTTHHHHHHT
T ss_pred             CCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhcCCCCeEeHHHHHHHHH
Confidence            9999999999999999977666666778899998889999999999987764

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.29  E-value=8.7e-06  Score=66.77  Aligned_cols=62  Identities=13%  Similarity=0.003  Sum_probs=53.9

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .+|+.||.+++|.|+..||+.++..+-..-..+.++.+|+.+ .|++|.|+..||..++...+
T Consensus       113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~~  175 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFW  175 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence            689999999999999999999998774444566789999999 69999999999998888754

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.29  E-value=1.7e-06  Score=61.66  Aligned_cols=62  Identities=15%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..++..+|..+. ....+.++.+|+.+ .|++|.|+..++..++...
T Consensus         5 l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            5 MERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            35789999999999999999999999887 66677889999999 6999999999998887654

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.28  E-value=1.1e-06  Score=72.81  Aligned_cols=89  Identities=17%  Similarity=0.209  Sum_probs=68.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.||.+++|.|+..||..+|..+  |...+.++.+|+.+ .|++|.|+..||..++..   ..         ...
T Consensus        41 l~~~F~~~D~d~~G~i~~~El~~~l~~~--g~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~---~~---------~~~  106 (180)
T 3mse_B           41 INELFYKLDTNHNGSLSHREIYTVLASV--GIKKWDINRILQALDINDRGNITYTEFMAGCYR---WK---------NIE  106 (180)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHT--TCCHHHHHHHHHHHCTTCCSEECHHHHHHHHSC---CT---------TC-
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh---cc---------cCC
Confidence            3468999999999999999999999976  44467889999999 699999999999755432   11         111


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +..+...|..     +|.|+.+||..++.
T Consensus       107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~  135 (180)
T 3mse_B          107 STFLKAAFNKIDKDEDGYISKSDIVSLVH  135 (180)
T ss_dssp             -CHHHHHHHHHCTTCSSCBCHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHc
Confidence            2455555653     58999999999886

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.28  E-value=4.3e-06  Score=68.74  Aligned_cols=94  Identities=9%  Similarity=0.135  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHH
Q psy4949          30 RFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKL   98 (275)
Q Consensus        30 ~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKl   98 (275)
                      .....+..++..+-.+.  .+.|+.+++..++           +..+|+.||.+++|.|+..||+.++.  ..+-..+.+
T Consensus        84 ~~~~~~~~~~~~~D~d~--~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~  159 (191)
T 3khe_A           84 QIEAEVDHILQSVDFDR--NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETW  159 (191)
T ss_dssp             HHHHHHHHHHHHTCTTC--SSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHH
T ss_pred             hhHHHHHHHHHHhCCCC--CCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHH
Confidence            34455777777765442  3578888777664           34699999999999999999999888  334455667


Q ss_pred             HHhchhh-ccCCCceeHHHHHHHHHHHHhc
Q psy4949          99 RYIFSQL-CDCNGHLVAWKFNEYLQDVLAI  127 (275)
Q Consensus        99 r~~F~ly-~D~nG~i~~~el~~~L~~i~~i  127 (275)
                      ..+|..+ .|++|.|+..||..+++.++.+
T Consensus       160 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~  189 (191)
T 3khe_A          160 HQVLQECDKNNDGEVDFEEFVEMMQKICDV  189 (191)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhcc
Confidence            8999999 6899999999999999887543

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.27  E-value=2.1e-06  Score=72.17  Aligned_cols=115  Identities=18%  Similarity=0.212  Sum_probs=83.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCC-CCCeeehHHHHHHHHHhcC-CChhhHHHH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVE-SLGRIRVFSIKVALATMCS-GKLMDKLRY  100 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~  100 (275)
                      +..|+..++..++..+    .   +     +.++     +.-+|+.||.+ ++|.|++.+|..++..+-. +...+.++.
T Consensus        13 ~g~l~~~el~~~~~~~----~---~-----~~~~-----i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~   75 (207)
T 2d8n_A           13 SGALSKEILEELQLNT----K---F-----SEEE-----LCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQH   75 (207)
T ss_dssp             TTCCCHHHHHHHHHHS----S---C-----CHHH-----HHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHc----C---C-----CHHH-----HHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHH
Confidence            4568999966665432    1   1     2233     34578899998 7999999999999998754 366778899


Q ss_pred             hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949         101 IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       101 ~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      +|+.+ .|++|.|+..||..++..+.       ..    ..+..++.+|.     ++|.|+.+||..++..
T Consensus        76 ~f~~~D~d~~G~i~~~Ef~~~~~~~~-------~~----~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~  135 (207)
T 2d8n_A           76 VFRSFDSNLDGTLDFKEYVIALHMTT-------AG----KTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA  135 (207)
T ss_dssp             HHHHHCTTCCSEEEHHHHHHHHHHHS-------CS----SSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHhcCCCCCeEeHHHHHHHHHHHc-------CC----CHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            99999 69999999999988877541       11    12334444554     2689999999998754

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.27  E-value=8.7e-06  Score=64.93  Aligned_cols=112  Identities=16%  Similarity=0.218  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHH--------HHHhhcCCCCCccChHHHHHHHH------------HH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLY--------HNLNKRLPVSQQVHVEVLSGLLL------------NW   64 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY--------~~~~k~~P~~~~v~~~~~~~l~~------------~~   64 (275)
                      +..+-++|+....+   .+..|+..++..+|..+-        ..+-++  ..+.|+.+++..++.            ..
T Consensus        17 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~--~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   91 (156)
T 1wdc_B           17 IQEMKEAFSMIDVD---RDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNFTMFLSIFSDKLSGTDSEETIRN   91 (156)
T ss_dssp             HHHHHHHHHHHCTT---CSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT--SSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHh--CCCcCcHHHHHHHHHHHhcCCChHHHHHH
Confidence            34456677766544   356788999888776541        122222  236788888776654            35


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +|+.||.+++|.|+..+|+.+|..+...-..+.+..+|+.+ .| +|.|+..+|..++.
T Consensus        92 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~  149 (156)
T 1wdc_B           92 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK  149 (156)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred             HHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence            79999999999999999999999874445567789999999 68 99999999987765

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=98.26  E-value=2.9e-06  Score=81.19  Aligned_cols=108  Identities=14%  Similarity=0.215  Sum_probs=82.2

Q ss_pred             CCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          46 LPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        46 ~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .|++.+++.++-.++  .-+|+.||.|++|.|+..||+.+|..|--.-.++.++.+|+.+ .|++|.|+..||..++...
T Consensus       290 ePs~E~Lt~EEI~EL--REaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~  367 (440)
T 3u0k_A          290 EPTRDQLTEEQIAEF--KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARK  367 (440)
T ss_dssp             CCBCBCCCHHHHHHH--HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC
T ss_pred             HhhHhhhhHHHHHHH--HHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            488888888877665  4689999999999999999999999886666677789999999 7999999999997665421


Q ss_pred             HhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         125 LAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       125 ~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +      .    -...++.++..|..     +|.|+.+||...+..
T Consensus       368 l------k----~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~  403 (440)
T 3u0k_A          368 M------K----DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN  403 (440)
T ss_dssp             ----------------CHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             h------c----CCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH
Confidence            1      0    01123455555653     589999999998754

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.25  E-value=1.8e-05  Score=62.00  Aligned_cols=108  Identities=19%  Similarity=0.175  Sum_probs=75.2

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCCccChHHHHHHHHH--------------HHHH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNK-RLPVSQQVHVEVLSGLLLN--------------WLLS   67 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k-~~P~~~~v~~~~~~~l~~~--------------~lf~   67 (275)
                      |+...+..+++..|++       ++..+    +..++..+.. +... +.|+.+++..++..              .+|+
T Consensus        25 i~~~el~~~l~~~~~~-------~~~~~----~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~   92 (149)
T 2mys_C           25 ITASQVGDIARALGQN-------PTNAE----INKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLR   92 (149)
T ss_pred             CcHHHHHHHHHHhCCC-------CCHHH----HHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHH
Confidence            5566666777776654       23445    4444444411 1112 56777776655433              4799


Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      .||++++|.|+..+|+.+|..+...-..+.+..+|+.-.|++|.|+..+|..++.
T Consensus        93 ~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  147 (149)
T 2mys_C           93 VFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINYEAFVKHIM  147 (149)
T ss_pred             HhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhhCCCCCCcEeHHHHHHHHh
Confidence            9999999999999999999987544556678889988237789999999987765

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.25  E-value=8e-06  Score=68.34  Aligned_cols=114  Identities=18%  Similarity=0.236  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHH--------HHHHHHHHhhcCCCCCccChHHHHHHH---------------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETL--------LSSLYHNLNKRLPVSQQVHVEVLSGLL---------------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~--------L~~lY~~~~k~~P~~~~v~~~~~~~l~---------------   61 (275)
                      +..+.++|+...-+   .+..|+..|+..+        +..++..+-.+  ..+.|+.+++..++               
T Consensus        28 ~~~l~~~F~~~D~d---~dG~I~~~El~~~~~lg~~~~~~~l~~~~D~d--~dg~i~~~EF~~~~~~~~~~~~~~~~~~~  102 (202)
T 2bec_A           28 LLRLHHRFRALDRN---KKGYLSRMDLQQIGALAVNPLGDRIIESFFPD--GSQRVDFPGFVRVLAHFRPVEDEDTETQD  102 (202)
T ss_dssp             HHHHHHHHHHHCSS---CSSCCCHHHHHTCHHHHHSTTHHHHHHTTSCS--SCCCCCHHHHHHHHGGGSCCCHHHHC---
T ss_pred             HHHHHHHHHHHCCC---CCCCcCHHHHHHHHhcCCCccHHHHHHHhCCC--CCCcCcHHHHHHHHHHhcccchhcccccc
Confidence            44566677766533   3567888887664        33444444333  23567877776654               


Q ss_pred             -------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCC-hhhHHHHhchh----h-ccCCCceeHHHHHHHHH
Q psy4949          62 -------------LNWLLSAYSVESLGRIRVFSIKVALATMCSGK-LMDKLRYIFSQ----L-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 -------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~-l~dKlr~~F~l----y-~D~nG~i~~~el~~~L~  122 (275)
                                   +..+|+.||.+++|.|+..||+.+|..+.+.. -.+.++.+|..    + .|++|.|+.+||..++.
T Consensus       103 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  182 (202)
T 2bec_A          103 PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLE  182 (202)
T ss_dssp             --CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTT
T ss_pred             cccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence                         55789999999999999999999999873333 34455666666    7 68999999999977665


Q ss_pred             H
Q psy4949         123 D  123 (275)
Q Consensus       123 ~  123 (275)
                      .
T Consensus       183 ~  183 (202)
T 2bec_A          183 K  183 (202)
T ss_dssp             T
T ss_pred             H
Confidence            3

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.25  E-value=1.4e-06  Score=70.18  Aligned_cols=91  Identities=12%  Similarity=0.137  Sum_probs=71.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|+..+|..+|..+......+.+..+|+.+ .|++|.|+..|+..++..+...           ..+
T Consensus        30 ~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-----------~~~   98 (166)
T 2aao_A           30 KEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKI-----------ERE   98 (166)
T ss_dssp             HHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHH-----------HTT
T ss_pred             HHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhc-----------ccH
Confidence            4689999999999999999999999876666677889999999 6899999999997666432111           123


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..+..+|..     +|.|+.+||...+.
T Consensus        99 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~  126 (166)
T 2aao_A           99 DHLFAAFTYFDKDGSGYITPDELQQACE  126 (166)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            456666653     58999999999874

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.24  E-value=4.2e-07  Score=74.73  Aligned_cols=135  Identities=17%  Similarity=0.211  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHH--HHHHhhcCCCCCccChHHHHHHHHHHH--------HHhhcCCCC
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSL--YHNLNKRLPVSQQVHVEVLSGLLLNWL--------LSAYSVESL   74 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~l--Y~~~~k~~P~~~~v~~~~~~~l~~~~l--------f~~fD~~~~   74 (275)
                      +..+-++|+....+   .+..|+..++..++..+  +..+.          .+.....+..++        |+.+|.+++
T Consensus        13 ~~~l~~~F~~~D~d---~dG~i~~~El~~~l~~~~~~~~~g----------~~~~~~~~~~l~~~~~~~~~f~~~D~d~d   79 (186)
T 2hps_A           13 LRKMKTRMQRVDVT---GDGFISREDYELIAVRIAKIAKLS----------AEKAEETRQEFLRVADQLGLAPGVRISVE   79 (186)
T ss_dssp             HHHHHHHHHTTCTT---CSSEEEHHHHHHHHHHHHHHHTCC----------HHHHHHHHHHHHHHHHHHTCCTTCEEEHH
T ss_pred             HHHHHHHhhhcCCC---CCCccCHHHHHHHHHHHHHHHHcC----------CCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            34456677766544   35678999987777766  32211          111111122233        799999999


Q ss_pred             CeeehHHHHHHHHHhcC-CChhhHHHHhc--hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC
Q psy4949          75 GRIRVFSIKVALATMCS-GKLMDKLRYIF--SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG  150 (275)
Q Consensus        75 G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F--~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~  150 (275)
                      |+|++.|  ..+..+.. ....++++.+|  .++ .|++|.|+..||..+++.+       |+.    .++..++.+|..
T Consensus        80 g~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~-------g~~----~~~~~~~~~~~~  146 (186)
T 2hps_A           80 EAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV-------GPD----LTDDKAITCFNT  146 (186)
T ss_dssp             HHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-------CTT----CCHHHHHHHHHH
T ss_pred             CcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh-------CCC----CCHHHHHHHHHH
Confidence            9999999  33333221 12234666666  777 6889999999999888754       321    235556666653


Q ss_pred             -----CCcccHHHHHHHHhc
Q psy4949         151 -----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 -----d~~Is~~eFl~~~~~  165 (275)
                           +|.|+.+||+..+..
T Consensus       147 ~D~d~dG~i~~~ef~~~~~~  166 (186)
T 2hps_A          147 LDFNKNGQISRDEFLVTVND  166 (186)
T ss_dssp             HCTTCSSEEEHHHHHHHHHH
T ss_pred             HcCCCCCcCcHHHHHHHHHH
Confidence                 689999999998753

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.24  E-value=1.3e-06  Score=73.72  Aligned_cols=92  Identities=15%  Similarity=0.202  Sum_probs=63.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|++.||+.+|..+-.....+-++.+|+.+ .|++|.|+..||...+......           ..+
T Consensus        60 ~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~-----------~~~  128 (197)
T 3pm8_A           60 RNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTY-----------LKK  128 (197)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHH-----------CSH
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhh-----------hhH
Confidence            4689999999999999999999999886556677789999999 6899999999996544322111           124


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +.++.+|..     +|.||.+||...+..
T Consensus       129 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~  157 (197)
T 3pm8_A          129 EVCLIPFKFFDIDGNGKISVEELKRIFGR  157 (197)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHC-
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            566666663     589999999998853

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.24  E-value=1.9e-06  Score=70.70  Aligned_cols=62  Identities=19%  Similarity=0.210  Sum_probs=53.7

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      ++..+||.+++|.|++.||+.++..+...-..+.++.+|+.+ .|++|.|+..||..++....
T Consensus       106 f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~~  168 (186)
T 2hps_A          106 IMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFL  168 (186)
T ss_dssp             HHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHh
Confidence            366888999999999999999999885445677789999999 69999999999998888653

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.24  E-value=2e-06  Score=61.92  Aligned_cols=65  Identities=12%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc--CCChhhHHHH----hchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC--SGKLMDKLRY----IFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc--~G~l~dKlr~----~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +..+|+.||.+++|.|+..||..++..+.  .+...+.++.    +|+.+ .|++|.|+..||......++.
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~~~   80 (83)
T 1yx7_A            9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAELLC   80 (83)
T ss_dssp             HHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHHHH
Confidence            45789999999999999999999999886  5556666777    99998 689999999999877776654

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=98.23  E-value=2.5e-06  Score=70.51  Aligned_cols=92  Identities=12%  Similarity=0.156  Sum_probs=70.9

Q ss_pred             HHHHHhhcCC-CCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSVE-SLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+|+.||.+ ++|+|+..+|..++..+-. +...+-++.+|+.+ .|++|.|+..||..++..+.           .+.
T Consensus        28 ~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~-----------~~~   96 (193)
T 1bjf_A           28 QEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTS-----------RGK   96 (193)
T ss_dssp             HHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHT-----------SSC
T ss_pred             HHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHc-----------CCC
Confidence            3568899988 9999999999999886632 34456679999999 69999999999988877541           122


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++..++..|..     +|.|+.+||..++..
T Consensus        97 ~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~  127 (193)
T 1bjf_A           97 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQA  127 (193)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCCeECHHHHHHHHHH
Confidence            35556666653     689999999998753

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.22  E-value=4.1e-06  Score=65.55  Aligned_cols=92  Identities=16%  Similarity=0.084  Sum_probs=69.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT  142 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~  142 (275)
                      .-+|+.||.+++|.|+..+|..+|..+-.....+.+..+|.   |++|.|+..|+..++.....      ..  ....+.
T Consensus         8 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~------~~--~~~~~~   76 (140)
T 1ggw_A            8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES---TLPAEVDMEQFLQVLNRPNG------FD--MPGDPE   76 (140)
T ss_dssp             HHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT---TSCSSEEHHHHHHHHCTTSS------SS--SSCCHH
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh---CCCCcCcHHHHHHHHHHHhc------cc--CcccHH
Confidence            45789999999999999999999998866666677777777   99999999999766543211      00  011245


Q ss_pred             HHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         143 LAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       143 ~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+..+|..     +|.|+.+||..++..
T Consensus        77 ~~~~~F~~~D~d~~G~i~~~el~~~l~~  104 (140)
T 1ggw_A           77 EFVKGFQVFDKDATGMIGVGELRYVLTS  104 (140)
T ss_dssp             HHHHHHHTTCSSCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            66777764     589999999998754

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=98.21  E-value=2.4e-06  Score=61.99  Aligned_cols=62  Identities=16%  Similarity=0.306  Sum_probs=54.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+++.+|..+. ....+.++.+|+.+ .|++|.|+..||..++...
T Consensus        13 l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           13 RERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            45789999999999999999999999876 66677789999999 6999999999998877653

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.20  E-value=8.6e-07  Score=88.73  Aligned_cols=128  Identities=12%  Similarity=0.148  Sum_probs=54.2

Q ss_pred             HHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHH
Q psy4949           9 IEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALAT   88 (275)
Q Consensus         9 ~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~   88 (275)
                      -++|+....+   .+..|+..|+..+|..+-..     +     +.++     +..+|+.+|.+++|.|+|.||+..+..
T Consensus        14 ~~~F~~fD~d---~dG~Is~~El~~~l~~lg~~-----~-----s~~e-----l~~lf~~~D~d~~G~I~f~EF~~~~~~   75 (624)
T 1djx_A           14 HSCLRKADKN---KDNKMNFKELKDFLKELNIQ-----V-----DDGY-----ARKIFRECDHSQTDSLEDEEIETFYKM   75 (624)
T ss_dssp             ------------------------------------------------------------------------CTTHHHHH
T ss_pred             HHHHHHhCCC---CCCcCcHHHHHHHHHHcCCC-----C-----CHHH-----HHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            3455444322   24568888866666544211     1     1111     356889999999999999999999987


Q ss_pred             hcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc---------CCCcccHHHH
Q psy4949          89 MCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS---------GNGKVTVNDF  159 (275)
Q Consensus        89 Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~---------~d~~Is~~eF  159 (275)
                      +..   .+.++.+|+.|+.++|.|+.+||..+|+...      ||.   ..+++.++.++.         ++|.|+++||
T Consensus        76 l~~---~~el~~aF~~fD~~~G~Is~~EL~~fL~~~q------ge~---~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF  143 (624)
T 1djx_A           76 LTQ---RAEIDRAFEEAAGSAETLSVERLVTFLQHQQ------REE---EAGPALALSLIERYEPSETAKAQRQMTKDGF  143 (624)
T ss_dssp             HTC---CHHHHHHHHHHHTTSSSEEHHHHHHHHHHTS------CCS---SCSHHHHHHHHHHHCCCHHHHHTTEECHHHH
T ss_pred             hcc---HHHHHHHHHHhcCCCCeecHHHHHHHHHHHh------CCC---CCCHHHHHHHHHHhCCChhhccCCCCCHHHH
Confidence            754   4789999999966699999999999987531      222   012333333332         2689999999


Q ss_pred             HHHHhcC
Q psy4949         160 MDTMMSE  166 (275)
Q Consensus       160 l~~~~~d  166 (275)
                      +.+++++
T Consensus       144 ~~~L~s~  150 (624)
T 1djx_A          144 LMYLLSA  150 (624)
T ss_dssp             HHHHHST
T ss_pred             HHHhcCc
Confidence            9999875

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.19  E-value=5.5e-06  Score=70.91  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=60.8

Q ss_pred             CccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+.+++..++           +..+|+.||.+++|.|+..||+.+|..+.. +-..+....+|+.+ .|++|.|+..|
T Consensus       109 g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~E  188 (219)
T 3cs1_A          109 GSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDE  188 (219)
T ss_dssp             CCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHH
T ss_pred             CcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            567766666543           557899999999999999999999987754 44455688999999 69999999999


Q ss_pred             HHHHHHHH
Q psy4949         117 FNEYLQDV  124 (275)
Q Consensus       117 l~~~L~~i  124 (275)
                      |..++...
T Consensus       189 F~~~~~~~  196 (219)
T 3cs1_A          189 FAAWASAV  196 (219)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99888753

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=98.19  E-value=9.6e-06  Score=68.17  Aligned_cols=62  Identities=13%  Similarity=0.131  Sum_probs=53.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +..+|+.||.+++|.|+..||+.++..+.  -..+.+..+|+.+ .|++|.|+..||..++...+
T Consensus       130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  192 (208)
T 2hpk_A          130 SNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRKFW  192 (208)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence            34589999999999999999999998763  5566789999999 69999999999998887653

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.18  E-value=6.9e-06  Score=65.42  Aligned_cols=93  Identities=9%  Similarity=0.023  Sum_probs=73.4

Q ss_pred             HHHHHhhcC--CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          63 NWLLSAYSV--ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        63 ~~lf~~fD~--~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .-+|+.||.  +++|.|+..+|..+|..+-.....+.+..+ +.+ .|++|.|+..||..++.....-         -..
T Consensus        12 ~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~---------~~~   81 (156)
T 1wdc_C           12 KDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC---------EQG   81 (156)
T ss_dssp             HHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS---------CCC
T ss_pred             HHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc---------cCC
Confidence            468899999  999999999999999988666666778888 878 6889999999998887754221         012


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+..+..+|..     +|.|+.+||..++..
T Consensus        82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~  112 (156)
T 1wdc_C           82 TFADYMEAFKTFDREGQGFISGAELRHVLTA  112 (156)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            35567777764     589999999998864

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.18  E-value=8.1e-07  Score=67.26  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=58.3

Q ss_pred             CccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHhc---CCChhhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATMC---SGKLMDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~G~l~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      +.|+.+++..++         +..+|+.||.+++|.|+..+|+.+|..+.   .....+.++.+|+.+ .|++|.|+..|
T Consensus        22 g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~e  101 (108)
T 2kyc_A           22 DSFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE  101 (108)
T ss_dssp             TTCCHHHHHHHHTCTTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSH
T ss_pred             CcCCHHHHHHHHhhCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHH
Confidence            455555555443         35789999999999999999999999883   335567789999999 68999999999


Q ss_pred             HHHHHH
Q psy4949         117 FNEYLQ  122 (275)
Q Consensus       117 l~~~L~  122 (275)
                      |..+++
T Consensus       102 F~~~~~  107 (108)
T 2kyc_A          102 FQEMVQ  107 (108)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            987764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.17  E-value=1.1e-05  Score=76.72  Aligned_cols=94  Identities=9%  Similarity=0.173  Sum_probs=75.6

Q ss_pred             CHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----------HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChh
Q psy4949          27 SVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----------NWLLSAYSVESLGRIRVFSIKVALATMCSGKLM   95 (275)
Q Consensus        27 ~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----------~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~   95 (275)
                      +....+..+..+|..+-++.  .+.|+.+++...+.           ..+|+.||.|++|+|++.||+.+|..  .+-.+
T Consensus       376 ~~~~~~~~~~~~~~~~D~d~--~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~  451 (484)
T 3nyv_A          376 DASAVEHEVDQVLDAVDFDK--NGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDS  451 (484)
T ss_dssp             SHHHHHHHHHHHHHHHTCCT--TSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCH
T ss_pred             cccccHHHHHHHHHHhCCCC--CCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCH
Confidence            44555677888888886653  36888888766643           35899999999999999999999886  55567


Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+.+|+.+ .|+||.|+.+||..++..+
T Consensus       452 ~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~  481 (484)
T 3nyv_A          452 ETWKSVLSEVDKNNDGEVDFDEFQQMLLKL  481 (484)
T ss_dssp             HHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence            7789999999 6999999999998888753

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=98.17  E-value=6.4e-06  Score=60.44  Aligned_cols=63  Identities=11%  Similarity=0.159  Sum_probs=54.9

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+-.....+.++.+|+.+ .|++|.|+..+|..++...
T Consensus        22 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            45789999999999999999999999875555677889999999 6899999999998887754

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.17  E-value=1.2e-05  Score=68.95  Aligned_cols=117  Identities=13%  Similarity=0.193  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHH-----------HHHHHHhhcCCCCCccChHHHHHHH------------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLS-----------SLYHNLNKRLPVSQQVHVEVLSGLL------------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~-----------~lY~~~~k~~P~~~~v~~~~~~~l~------------   61 (275)
                      +..+.++|+...-+. +.+..|+..|+..+|.           .+|..+-++.  .+.|+.+++..++            
T Consensus        47 i~~l~~~F~~~D~d~-~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~--dG~I~~~Ef~~~~~~~~~~~~~~~~  123 (226)
T 2zfd_A           47 IEALYELFKKISSAV-IDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH--NGILGFEEFARALSVFHPNAPIDDK  123 (226)
T ss_dssp             HHHHHHHHHHHHTSS-SCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSC--SSSBCHHHHHHHHHHTSTTSCHHHH
T ss_pred             HHHHHHHHHHhCccc-CCCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCC--CCcCcHHHHHHHHHHHccCCCHHHH
Confidence            344555665544320 1356788889887763           3666654442  3678888876654            


Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHh---cCCChhh-----HHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATM---CSGKLMD-----KLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~L---c~G~l~d-----Klr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.|++|.|+..||+.++..+   .+..+.+     -++.+|+.+ .|++|.|+.+||..++...
T Consensus       124 l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~  195 (226)
T 2zfd_A          124 IHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH  195 (226)
T ss_dssp             HHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            4468999999999999999999999643   2323322     246778888 6999999999998888753

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.16  E-value=1.3e-05  Score=81.23  Aligned_cols=135  Identities=13%  Similarity=0.125  Sum_probs=93.8

Q ss_pred             chHHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCe
Q psy4949           3 IDIWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGR   76 (275)
Q Consensus         3 vd~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~   76 (275)
                      |+...+.++++.. +...--....++..+    +..|+..+-++  ..+.|+.+++..++.     ..+|+.||.|++|+
T Consensus       548 Is~~El~~~L~~l~~~~~~~~g~~~s~~~----~~~l~~~~D~d--~~G~I~f~EF~~l~~~~~~l~~~F~~~D~d~dG~  621 (714)
T 3bow_A          548 ISAFELQTILRRVLAKREDIKSDGFSIET----CKIMVDMLDED--GSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT  621 (714)
T ss_dssp             BCHHHHHHHHHHHHTTCTTSCCSCCCHHH----HHHHHHHHCCS--SCSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSS
T ss_pred             CCHHHHHHHHHHHhhhcccccCCCCCHHH----HHHHHHHhCCC--CCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            4455555555553 110000123356666    55666666554  236899999887764     35899999999999


Q ss_pred             eehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          77 IRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      |+..||+.+|..+-..-..+.++.+|..+.|++|.|+.+||..++...                 +.+...|..     +
T Consensus       622 Is~~El~~~L~~~G~~ls~~~~~~l~~~~Dd~dG~Isf~EF~~~l~~~-----------------~~l~~~F~~~D~d~d  684 (714)
T 3bow_A          622 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL-----------------EILFKIFKQLDPENT  684 (714)
T ss_dssp             EEHHHHHHHHHHTTEECCHHHHHHHHHHHSCTTCEECHHHHHHHHHHH-----------------HHHHHHHSSSCSSCC
T ss_pred             ECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCeEcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCC
Confidence            999999999987754456677899999998889999999998887643                 234445554     5


Q ss_pred             CcccHHHHH
Q psy4949         152 GKVTVNDFM  160 (275)
Q Consensus       152 ~~Is~~eFl  160 (275)
                      |.|+++|+-
T Consensus       685 G~Is~~el~  693 (714)
T 3bow_A          685 GTIQLDLIS  693 (714)
T ss_dssp             SEEEEEHHH
T ss_pred             CcEEHHHHH
Confidence            789888743

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.16  E-value=1.1e-06  Score=73.59  Aligned_cols=92  Identities=14%  Similarity=0.151  Sum_probs=70.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.+++|.|+..||..+|..+......+.++.+|+.+ .|++|.|+..||..++..   +    ...    ..+
T Consensus        13 ~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~---~----~~~----~~~   81 (188)
T 1s6i_A           13 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH---L----NKL----ERE   81 (188)
T ss_dssp             HHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTT---S----SSS----CCC
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHH---H----hcc----CHH
Confidence            4689999999999999999999998876666678889999999 699999999999765532   1    111    112


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..++.+|..     +|.|+.+||..++..
T Consensus        82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~  110 (188)
T 1s6i_A           82 ENLVSAFSYFDKDGSGYITLDEIQQACKD  110 (188)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            334444543     589999999998743

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.15  E-value=1.5e-05  Score=62.99  Aligned_cols=63  Identities=17%  Similarity=0.211  Sum_probs=49.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchh----h-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQ----L-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~l----y-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+|+.++..+.+ .-..+.+..+|+.    + .|++|.|+.+||..+++.+
T Consensus        77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  145 (155)
T 3ll8_B           77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  145 (155)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence            456899999999999999999999988533 3334445555655    7 6899999999998888753

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=98.14  E-value=2.8e-06  Score=67.62  Aligned_cols=63  Identities=14%  Similarity=0.040  Sum_probs=54.9

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+.. .-..+.++.+|+.+ .|++|.|+..||..++...
T Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           42 LCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence            457899999999999999999999987763 56677789999999 6999999999998888764

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.14  E-value=4.5e-06  Score=58.81  Aligned_cols=63  Identities=13%  Similarity=0.206  Sum_probs=54.4

Q ss_pred             HHHHHHhh-cCCCC-CeeehHHHHHHHHHhcCCC--hhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAY-SVESL-GRIRVFSIKVALATMCSGK--LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~f-D~~~~-G~I~~~ef~~aLs~Lc~G~--l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.| |.+++ |.|+..+|+.+|..+....  ..+.++.+|+.+ .|++|.|+..||..++..+
T Consensus         7 l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            45789999 99999 9999999999999885444  567789999999 6899999999998888754

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.13  E-value=7.1e-06  Score=70.74  Aligned_cols=76  Identities=11%  Similarity=0.128  Sum_probs=60.2

Q ss_pred             CCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhcC-CChhhHHHHhchhh-ccCCCceeHH
Q psy4949          49 SQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATMCS-GKLMDKLRYIFSQL-CDCNGHLVAW  115 (275)
Q Consensus        49 ~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G~l~dKlr~~F~ly-~D~nG~i~~~  115 (275)
                      .+.|+.+++..+           -+..+|+.||.+++|.|+..||+.+|..+.. |-..+.+..+|..+ .|++|.|+..
T Consensus       111 ~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~  190 (226)
T 2lvv_A          111 VGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFD  190 (226)
T ss_dssp             CCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHH
T ss_pred             CCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            357887776663           2345799999999999999999999987732 33333488999998 6999999999


Q ss_pred             HHHHHHHHH
Q psy4949         116 KFNEYLQDV  124 (275)
Q Consensus       116 el~~~L~~i  124 (275)
                      ||..++..-
T Consensus       191 EF~~~~~~~  199 (226)
T 2lvv_A          191 EFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999888753

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.13  E-value=8.1e-06  Score=59.92  Aligned_cols=63  Identities=11%  Similarity=0.192  Sum_probs=55.3

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+......+.++.+|+.+ .|++|.|+..+|..++...
T Consensus        11 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~   74 (92)
T 2kn2_A           11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV   74 (92)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            45789999999999999999999999886666677889999999 6899999999998877654

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=98.12  E-value=3.7e-06  Score=64.36  Aligned_cols=59  Identities=17%  Similarity=0.159  Sum_probs=51.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                      .-+|+.||.|++|+|+..||+.+|..+-..--++.++.+|+.+ .|+||.|+.+||..++
T Consensus        39 ~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           39 REAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             HHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            4689999999999999999999999886555667789999999 7999999999997654

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.11  E-value=2.4e-05  Score=68.51  Aligned_cols=112  Identities=15%  Similarity=0.288  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHH-------------HHHHhhcCCCCCccChHHHHHHH----------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSL-------------YHNLNKRLPVSQQVHVEVLSGLL----------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~l-------------Y~~~~k~~P~~~~v~~~~~~~l~----------   61 (275)
                      |..+.+.|...     +.+..|+..++..++..+             |..+-++  ..+.|+.+++..++          
T Consensus        93 i~~l~~~fd~~-----~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d--~dG~I~~~Ef~~~l~~~~~~~~~~  165 (256)
T 2jul_A           93 LQSLYRGFKNE-----CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDAD--GNGAIHFEDFVVGLSILLRGTVHE  165 (256)
T ss_dssp             HHHHHHHHHHH-----CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCS--CCSEECSHHHHHHHHHHHSCCHHH
T ss_pred             HHHHHHHHHhh-----CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccC--CCCcCcHHHHHHHHHHHhccChHH
Confidence            33445555542     135568888877766543             3333332  23578877776654          


Q ss_pred             -HHHHHHhhcCCCCCeeehHHHHHHHHHhc---C---------CChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 -LNWLLSAYSVESLGRIRVFSIKVALATMC---S---------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 -~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc---~---------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                       +.++|+.||.+++|.|++.||+.++..+.   +         ...++.++.+|+.+ .|++|.|+.+||..++..
T Consensus       166 ~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  241 (256)
T 2jul_A          166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK  241 (256)
T ss_dssp             HHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence             34689999999999999999999998763   1         22667789999999 699999999999887763

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.11  E-value=4.6e-06  Score=61.85  Aligned_cols=61  Identities=15%  Similarity=0.206  Sum_probs=52.6

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      -+..+|+.||.+++|.|+..||+.+|..+  |-..+.++.+|+.+ .|++|.|+..||..++..
T Consensus        28 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~--g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           28 RLRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITFQEFARGFLG   89 (91)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHT--TCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHHc--CcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            35578999999999999999999999876  35567789999999 689999999999877764

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.08  E-value=2.2e-06  Score=61.52  Aligned_cols=60  Identities=13%  Similarity=0.154  Sum_probs=52.5

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +. +|+.||.+++|.|+..+|+.+|..+. .....+.++.+|+.+ .|++|.|+..+|..++.
T Consensus        11 l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   72 (81)
T 1c7v_A           11 LR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   72 (81)
T ss_dssp             HH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            45 89999999999999999999998775 556677889999999 68999999999977765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.08  E-value=7.2e-06  Score=78.76  Aligned_cols=92  Identities=12%  Similarity=0.173  Sum_probs=72.2

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC--------CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS--------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLE  133 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~--------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE  133 (275)
                      .-+|+.||.|++|.|++.||..+|..+..        ....+.++.+|+.+ .|++|.|+..||..++.....       
T Consensus       358 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~-------  430 (504)
T 3q5i_A          358 TDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQI-------  430 (504)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHH-------
T ss_pred             HHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhc-------
Confidence            35899999999999999999999998842        46778899999999 699999999999776543210       


Q ss_pred             CCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         134 SPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       134 ~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                          ...++.++..|..     +|.||.+||..++..
T Consensus       431 ----~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~  463 (504)
T 3q5i_A          431 ----LFSEERLRRAFNLFDTDKSGKITKEELANLFGL  463 (504)
T ss_dssp             ----HTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC
T ss_pred             ----ccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence                1134556666653     689999999998753

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.07  E-value=1.4e-05  Score=73.29  Aligned_cols=135  Identities=9%  Similarity=0.087  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHH------------HhhcCCCCCccChHHHHHHH-----HHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHN------------LNKRLPVSQQVHVEVLSGLL-----LNWLLS   67 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~------------~~k~~P~~~~v~~~~~~~l~-----~~~lf~   67 (275)
                      +..+.++|+....+   .+..|+..++..+|..+...            +-..  ..+.|+..++..+.     +..+|+
T Consensus       121 ~~~l~~~F~~~D~d---~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d--~~G~I~f~ef~~l~~~~~~l~~~F~  195 (323)
T 1ij5_A          121 TNILRQLFLSSAVS---GSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEND--TKGRMSYITLVAVANDLAALVADFR  195 (323)
T ss_dssp             HHHHHHHHTSSSST---TSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHC--CSSTHHHHHHTTSHHHHHTSCCCHH
T ss_pred             HHHHHHHHHHHhCC---CCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcCcHHHHHhhhhHHHHHHHHHH
Confidence            44566677655543   35779999988888765321            1111  11233332222211     112577


Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHH-hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHh
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRY-IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ  145 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~-~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~  145 (275)
                      .||.+++|.|+..+|..+|  +..+...+-+.. +|+.+ .|++|.|+..+|..++....                 .+.
T Consensus       196 ~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-----------------~l~  256 (323)
T 1ij5_A          196 KIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-----------------VLR  256 (323)
T ss_dssp             HHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH-----------------HHH
T ss_pred             HHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH-----------------HHH
Confidence            7888888888888888777  333333455666 77777 57778888888777666542                 233


Q ss_pred             hhhc---C--CCcccHHHHHHHH
Q psy4949         146 EIFS---G--NGKVTVNDFMDTM  163 (275)
Q Consensus       146 ~cF~---~--d~~Is~~eFl~~~  163 (275)
                      .+|.   .  +|.||.+||..++
T Consensus       257 ~~F~~~D~d~dG~Is~~El~~~l  279 (323)
T 1ij5_A          257 ILYAFADFDKSGQLSKEEVQKVL  279 (323)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHH
T ss_pred             HHHHHhCCCCCCCccHHHHHHHH
Confidence            3333   2  5889999999887

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=98.07  E-value=8.9e-06  Score=60.89  Aligned_cols=61  Identities=8%  Similarity=0.138  Sum_probs=53.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..||+.+|..+....-.+.++.+|+.+ .|++|.|+.+||..++.
T Consensus        31 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             HHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            45789999999999999999999999886666777889999999 68999999999977664

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.06  E-value=3.8e-06  Score=58.36  Aligned_cols=61  Identities=20%  Similarity=0.266  Sum_probs=52.5

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..+|+.++..+......+.++.+|+.+ .|++|.|+..||..++.
T Consensus         8 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            45789999999999999999999998776556677789999999 58999999999976653

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=98.05  E-value=2.5e-05  Score=58.79  Aligned_cols=62  Identities=6%  Similarity=0.090  Sum_probs=53.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+......+.++.+|..+ .|++|.|+..+|..++..
T Consensus        26 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~   88 (105)
T 1wlz_A           26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS   88 (105)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence            34789999999999999999999999886666777889999999 589999999999877753

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.04  E-value=3.5e-05  Score=64.27  Aligned_cols=111  Identities=15%  Similarity=0.208  Sum_probs=73.5

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHH---------HHHHHHHHHhhcCC-CCCccChHHHHHHH-----------HHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFET---------LLSSLYHNLNKRLP-VSQQVHVEVLSGLL-----------LNWL   65 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~---------~L~~lY~~~~k~~P-~~~~v~~~~~~~l~-----------~~~l   65 (275)
                      .+-++|....     ++..|+..++..         .+..|+..+.+..+ ..+.|+.+++.+++           +.++
T Consensus        29 ~~~~~F~~~D-----~dG~I~~~el~~~lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~  103 (179)
T 3a8r_A           29 AVEKRFNQLQ-----VDGVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTF  103 (179)
T ss_dssp             HHHHHHHHHC-----BTTBEEGGGHHHHHTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             HHHHHHhccC-----CCCCCcHHHHHHHHCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHH
Confidence            3445555443     234455555543         23456665543211 12456766555442           3478


Q ss_pred             HHhhcCCCCCeeehHHHHHHHH-HhcCCC--------hhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          66 LSAYSVESLGRIRVFSIKVALA-TMCSGK--------LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        66 f~~fD~~~~G~I~~~ef~~aLs-~Lc~G~--------l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      |+.||.|++|+|+..|++.+|. .+. ..        ..+..+.+|+.+ .|++|.|+..||..++..
T Consensus       104 F~~~D~d~dG~Is~~El~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  170 (179)
T 3a8r_A          104 FDMVDKNADGRLTAEEVKEIIALSAS-ANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ  170 (179)
T ss_dssp             HHHHCTTCSSCBCHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred             HHHHCCCCCCcCCHHHHHHHHHHHhc-cccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            9999999999999999999997 442 33        566788999998 699999999999877653

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.04  E-value=8.3e-07  Score=64.59  Aligned_cols=79  Identities=16%  Similarity=0.285  Sum_probs=53.8

Q ss_pred             CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC
Q psy4949          72 ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG  150 (275)
Q Consensus        72 ~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~  150 (275)
                      |++|.|++.|..++.. + ...-.++++.+|+.+ .|++|.|+..++..+|+.+       |.    ..+++.++.+|..
T Consensus         1 ~~~G~i~~~e~~~~~~-l-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------~~----~~~~~~~~~l~~~   67 (87)
T 1s6j_A            1 HSSGHIDDDDKHMAER-L-SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-------GS----ELMESEIKDLMDA   67 (87)
T ss_dssp             CCSSSSSSHHHHSSSS-S-CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTT-------TS----SCCHHHHHHHHHH
T ss_pred             CCCCccCccHHHHHHH-C-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHH
Confidence            5789999999433322 2 333456788999999 6889999999998777642       22    1234555555553


Q ss_pred             -----CCcccHHHHHHHH
Q psy4949         151 -----NGKVTVNDFMDTM  163 (275)
Q Consensus       151 -----d~~Is~~eFl~~~  163 (275)
                           +|.|+.+||+..+
T Consensus        68 ~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           68 ADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HCTTCSSEECHHHHTTCC
T ss_pred             hCCCCCCcCcHHHHHHHH
Confidence                 6889999998754

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.04  E-value=3.4e-05  Score=63.34  Aligned_cols=115  Identities=12%  Similarity=0.194  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHcCCCCc--CC-C--CCCCHHHHHHHHH---------HHHHHHhhcCCCCCc-cChHHHHHHH--------
Q psy4949           5 IWNVIEAFRENGLNAI--EL-Q--SDVSVARFETLLS---------SLYHNLNKRLPVSQQ-VHVEVLSGLL--------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~--~~-~--~~l~~~~l~~~L~---------~lY~~~~k~~P~~~~-v~~~~~~~l~--------   61 (275)
                      +..+.++|+...-+..  +. +  ..|+..++.. |.         .++..+-..  ..+. |+.+++..++        
T Consensus        19 ~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~~~~D~d--~~G~~I~~~EF~~~~~~~~~~~~   95 (183)
T 1dgu_A           19 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRVFSTS--PAKDSLSFEDFLDLLSVFSDTAT   95 (183)
T ss_dssp             HHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHHHHHSCS--SSSCCCCHHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHHHHhCCC--CCCCEecHHHHHHHHHHhcCCCC
Confidence            4455666766543100  11 2  4566666544 32         244444333  2367 8887776554        


Q ss_pred             ----HHHHHHhhcCCCCCeeehHHHHHHHHHhcC----CChh-hHHH----Hhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 ----LNWLLSAYSVESLGRIRVFSIKVALATMCS----GKLM-DKLR----YIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ----~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~----G~l~-dKlr----~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                          +..+|+.||.+++|.|+..||+.+|..+..    ..+. +.++    .+|+.+ .|++|.|+..||..++.
T Consensus        96 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  170 (183)
T 1dgu_A           96 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS  170 (183)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence                446899999999999999999999987765    2333 3344    388888 68999999999977664

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.03  E-value=1.5e-05  Score=59.51  Aligned_cols=61  Identities=16%  Similarity=0.040  Sum_probs=52.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.||+|++|+|+..+++.+|..+  |-..+.++.+|+.. .|++|.|+.+||..++..+.
T Consensus        12 ~~~F~~~D~d~dG~I~~~el~~~l~~~--g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~   73 (92)
T 1fi6_A           12 VNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLDEFCAAFHLVV   73 (92)
T ss_dssp             HHHHTTTCCSTTCEEEHHHHHHHHHHH--SSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999876  55577889999988 68999999999988887654

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=98.03  E-value=5e-05  Score=61.79  Aligned_cols=113  Identities=17%  Similarity=0.162  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHH--------HHHhhcCCCCCccChHHHHHHH------------HHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLY--------HNLNKRLPVSQQVHVEVLSGLL------------LNW   64 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY--------~~~~k~~P~~~~v~~~~~~~l~------------~~~   64 (275)
                      |..+-++|+..--+   .+..|+..+|..+|+.+-        ..+.....  +.|+.+++..++            +.-
T Consensus        15 i~elk~~F~~~D~d---~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~--~~i~f~ef~~~~~~~~~~~~~~~~l~~   89 (153)
T 3i5g_B           15 MQELKEAFTMIDQD---RDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP--GQLNFTAFLTLFGEKVSGTDPEDALRN   89 (153)
T ss_dssp             HHHHHHHHHHHCCS---TTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSS--SCCCSHHHHHTTTTTTTTCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhcc--CCccHHHHHHHHHhhhcccccHHHHHH
Confidence            44556677666544   356788999877776532        22222222  345655544432            345


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      .|++||.+++|.|+..+++.+|..+...--.+-+..+|+.+..+||.|+..||..+++
T Consensus        90 aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~dG~I~y~EF~~~m~  147 (153)
T 3i5g_B           90 AFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKNKQFNYNKMVDIKG  147 (153)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEETTEECHHHHHHHHH
T ss_pred             HHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCCcCEEcHHHHHHHhc
Confidence            8999999999999999999999865333334557889988843399999999977764

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.03  E-value=6.7e-06  Score=61.94  Aligned_cols=61  Identities=13%  Similarity=0.071  Sum_probs=52.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.||+|++|+|+..|++.+|..+  |-..+.++.+|+.+ .|++|.|+.+||..++..+.
T Consensus        13 ~~~F~~~D~d~dG~I~~~el~~~l~~~--g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~   74 (95)
T 1c07_A           13 DEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS   74 (95)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHTT--TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence            468999999999999999999998765  56678899999998 68999999999988887654

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.03  E-value=1.6e-05  Score=61.88  Aligned_cols=63  Identities=17%  Similarity=0.111  Sum_probs=53.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +..+|+.||.|++|+|+..|++.+|.  ..+-..+.++.+|+.+ .|++|.|+..||..++..+..
T Consensus        16 l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~   79 (111)
T 2kgr_A           16 YRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDV   79 (111)
T ss_dssp             HHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHH
Confidence            34789999999999999999999987  3455567789999988 689999999999888876543

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.03  E-value=1e-05  Score=58.78  Aligned_cols=62  Identities=5%  Similarity=-0.136  Sum_probs=53.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhH---HHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDK---LRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dK---lr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||.+++|.|+..+++.+|..+......+.   ++.+|+.+ .|++|.|+. +|..++...
T Consensus        16 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~   81 (86)
T 1j7q_A           16 CMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW   81 (86)
T ss_dssp             HHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence            357899999999999999999999998866656666   88999988 688999999 998887654

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.03  E-value=3.7e-05  Score=62.99  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=68.8

Q ss_pred             CCCCCHHHHHHHHHHHH--------HHH-hhcCCCCCccChHHHHHHHHH--------------HHHHhhcCCCCCeeeh
Q psy4949          23 QSDVSVARFETLLSSLY--------HNL-NKRLPVSQQVHVEVLSGLLLN--------------WLLSAYSVESLGRIRV   79 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY--------~~~-~k~~P~~~~v~~~~~~~l~~~--------------~lf~~fD~~~~G~I~~   79 (275)
                      +..|+..+|..+|+.+=        ..+ ...-...+.|+.+++..++..              -.|++||++++|.|+.
T Consensus        25 dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~  104 (159)
T 3i5g_C           25 DGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISS  104 (159)
T ss_dssp             SSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECH
T ss_pred             CCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcH
Confidence            34567777666665431        011 111112346777777766533              3699999999999999


Q ss_pred             HHHHHHHHHhcCCChhhHHHHhchhhc---cCCCceeHHHHHHHHH
Q psy4949          80 FSIKVALATMCSGKLMDKLRYIFSQLC---DCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        80 ~ef~~aLs~Lc~G~l~dKlr~~F~ly~---D~nG~i~~~el~~~L~  122 (275)
                      .+++.+|..+-..--.+-++.+++.+.   |++|.|+..||..++.
T Consensus       105 ~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~  150 (159)
T 3i5g_C          105 AEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM  150 (159)
T ss_dssp             HHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHH
Confidence            999999987654444566788998773   7899999999976654

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.00  E-value=1.5e-05  Score=76.92  Aligned_cols=94  Identities=14%  Similarity=0.224  Sum_probs=74.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.||.+++|.|+..||..+|..+......+.++.+|+.+ .|++|.|+.+||..++..+..-          ...
T Consensus       314 l~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~----------~~~  383 (450)
T 3sg6_A          314 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD----------TDS  383 (450)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC----------------C
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccc----------cch
Confidence            34789999999999999999999999988777888899999999 6999999999998777543211          112


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++.++.+|..     +|.|+.+||..++..
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~  413 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTN  413 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4556666664     689999999998864

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=97.99  E-value=4.9e-05  Score=57.71  Aligned_cols=61  Identities=13%  Similarity=0.180  Sum_probs=53.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..+|..+|..+......+.++.+|..+ .|++|.|+..+|..++.
T Consensus        34 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~   95 (107)
T 2d58_A           34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML   95 (107)
T ss_dssp             HHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHS
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            45789999999999999999999999886666778889999999 68999999999977664

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.97  E-value=2.2e-05  Score=75.24  Aligned_cols=113  Identities=10%  Similarity=0.121  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHH--------------------HHHHHHHhhcCCCCCccChHHHHHHH---
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLL--------------------SSLYHNLNKRLPVSQQVHVEVLSGLL---   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L--------------------~~lY~~~~k~~P~~~~v~~~~~~~l~---   61 (275)
                      +..+-++|+....+   .+..|+..|+..++                    ..++..+-++  ..+.|+.+++..++   
T Consensus       345 ~~~l~~~F~~~D~d---~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d--~~G~I~~~EF~~~~~~~  419 (494)
T 3lij_A          345 TKELTDIFRHIDKN---GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD--RNGYIDYSEFVTVAMDR  419 (494)
T ss_dssp             HHHHHHHHHHHCTT---CSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTT--CSSSEEHHHHHHHHSCH
T ss_pred             HHHHHHHHHHhCcC---CCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHhh
Confidence            34455667666544   35677888875444                    4445554433  23678888877664   


Q ss_pred             --------HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 --------LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 --------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                              +..+|+.||.|++|.|++.||+.+|..  .+..++..+.+|+.+ .|+||.|+.+||..+++.+
T Consensus       420 ~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  489 (494)
T 3lij_A          420 KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL  489 (494)
T ss_dssp             HHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHH
T ss_pred             hccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhh
Confidence                    446999999999999999999998764  445566788999999 6999999999999888764

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=97.96  E-value=9e-06  Score=57.49  Aligned_cols=63  Identities=14%  Similarity=0.208  Sum_probs=52.4

Q ss_pred             HHHHHHhhcC-CCCC-eeehHHHHHHHHHhcCCC--hhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSV-ESLG-RIRVFSIKVALATMCSGK--LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~-~~~G-~I~~~ef~~aLs~Lc~G~--l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||. +++| .|+..+|+.+|....+..  ..+.++.+|+.+ .|++|.|+..||..++..+
T Consensus         9 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            9 LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            4578999999 9999 999999999997644443  456678899988 6899999999998887754

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=97.95  E-value=1.9e-05  Score=59.86  Aligned_cols=61  Identities=8%  Similarity=0.026  Sum_probs=48.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHH----hcCCChh------------hHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALAT----MCSGKLM------------DKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~----Lc~G~l~------------dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.|++|.|+..+|+.++..    +.+-...            +..+.+|+.+ .|++|.|+..||..++.
T Consensus        22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            457899999999999999999999985    3332221            2367889988 69999999999976553

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.95  E-value=4.9e-06  Score=79.48  Aligned_cols=90  Identities=11%  Similarity=0.173  Sum_probs=65.1

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcC--------------CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhch
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCS--------------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIP  128 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~--------------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~  128 (275)
                      -+|+.||.|+||.|++.||..++..+.+              +..++.++.+|+.+ .|++|.|+..||...+..   . 
T Consensus       335 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~---~-  410 (486)
T 3mwu_A          335 EIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAID---R-  410 (486)
T ss_dssp             HHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSC---T-
T ss_pred             HHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHh---h-
Confidence            4899999999999999999988876643              45578899999999 699999999998543321   0 


Q ss_pred             hhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         129 AAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       129 ~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                             .....++.+...|..     +|.|+.+||..++.
T Consensus       411 -------~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~  444 (486)
T 3mwu_A          411 -------TILLSRERMERAFKMFDKDGSGKISTKELFKLFS  444 (486)
T ss_dssp             -------TTTCCHHHHHHHHHHHCSSCSSSBCSSCC-----
T ss_pred             -------hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence                   111235566666653     68999999998875

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=97.94  E-value=1.9e-05  Score=66.53  Aligned_cols=60  Identities=15%  Similarity=0.215  Sum_probs=48.1

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCCh-hhHHHHh----chhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKL-MDKLRYI----FSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l-~dKlr~~----F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ..+|+.||.+++|.|+..||+.+|..+.+..+ .+.++.+    |+.+ .|++|.|+..||..++.
T Consensus       116 ~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~  181 (208)
T 2ct9_A          116 HFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE  181 (208)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTT
T ss_pred             HHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            36799999999999999999999998744443 3444555    8888 69999999999976554

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=97.92  E-value=2.1e-05  Score=57.77  Aligned_cols=65  Identities=20%  Similarity=0.141  Sum_probs=55.3

Q ss_pred             HHHHHHhhc-CCCCC-eeehHHHHHHHHH-----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          62 LNWLLSAYS-VESLG-RIRVFSIKVALAT-----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        62 ~~~lf~~fD-~~~~G-~I~~~ef~~aLs~-----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +..+|+.|| .+++| .|+..+|+.+|..     +-.....+.++.+|+.+ .|++|.|+..||..++..+..
T Consensus        11 l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~   83 (93)
T 1k2h_A           11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV   83 (93)
T ss_dssp             HHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            457899999 79999 9999999999986     55555677789999999 699999999999888876543

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=97.91  E-value=1.2e-05  Score=61.39  Aligned_cols=61  Identities=20%  Similarity=0.119  Sum_probs=52.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||++++|+|+..|++.+|..+  |-.++.++.+|+.. .|++|.|+..||..+++.+
T Consensus        13 ~~~~F~~~D~d~dG~Is~~el~~~l~~~--~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A           13 YEKYYRQVEAGNTGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHHCCTTSSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            4578999999999999999999998754  55577889999998 6999999999998887754

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=97.88  E-value=1.5e-05  Score=82.52  Aligned_cols=86  Identities=12%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+++.+|.|++|+|++.||+..+..+      ++++.+|+.+ .|++|.|+.+||..+|+.+       |..    .+
T Consensus       579 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-------g~~----l~  641 (900)
T 1qxp_A          579 CRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA-------GFK----LP  641 (900)
T ss_dssp             HHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT-------TEE----CC
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHhhCCCCCCeECHHHHHHHHHHh-------CCC----CC
Confidence            3567899999999999999999998876      8999999999 6999999999999888753       211    12


Q ss_pred             hHHHhhhhc----CCCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFS----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~----~d~~Is~~eFl~~~~  164 (275)
                      +..++.+|.    ++|.|+.+||+..+.
T Consensus       642 ~~~~~~l~~~~dd~dg~I~~~eF~~~~~  669 (900)
T 1qxp_A          642 CQLHQVIVARFADDELIIDFDNFVRCLV  669 (900)
T ss_dssp             HHHHHHHHHHTSCSSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCeEcHHHHHHHHH
Confidence            333444333    367899999888765

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=97.87  E-value=3.6e-06  Score=68.06  Aligned_cols=89  Identities=8%  Similarity=0.097  Sum_probs=45.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcC-------CCh-
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCS-------GKL-   94 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-------G~l-   94 (275)
                      +..|+..|+...+..++..     +. ...+.++    -+..+|+.||.|++|+|+..||+.++..+..       +.+ 
T Consensus        41 dG~I~~~Ef~~~l~~~~~~-----~~-~~~~~~~----~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s  110 (143)
T 3a4u_B           41 NTVHDQEHIMEHLEGVINK-----PE-AEMSPQE----LQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS  110 (143)
T ss_dssp             ----------------------------CCCHHH----HHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CC
T ss_pred             CCcCcHHHHHHHHHHHhcc-----cc-cccCHHH----HHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCC
Confidence            4568888866665554321     11 1112222    2457899999999999999999999876642       222 


Q ss_pred             ----hhHHHHhchhh-ccCCCceeHHHHHHHH
Q psy4949          95 ----MDKLRYIFSQL-CDCNGHLVAWKFNEYL  121 (275)
Q Consensus        95 ----~dKlr~~F~ly-~D~nG~i~~~el~~~L  121 (275)
                          .+-++.+|+.+ .|++|.|+.+||..++
T Consensus       111 ~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence                22236778988 6999999999986554

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=97.86  E-value=6.5e-05  Score=57.47  Aligned_cols=71  Identities=13%  Similarity=0.092  Sum_probs=56.0

Q ss_pred             hHHHHHHHHHHHHHhhcCCC---CCeeehHHHHHHHHHhcCCCh-----hhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSAYSVES---LGRIRVFSIKVALATMCSGKL-----MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~fD~~~---~G~I~~~ef~~aLs~Lc~G~l-----~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .+.+.+-+ --+|+.||.++   +|+|+..|++.+|..+.+..+     .+.+..+++.+ .|+||.|+-+||..++..+
T Consensus         6 le~~i~~l-~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~   84 (100)
T 3nxa_A            6 LEKAVIVL-VENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI   84 (100)
T ss_dssp             HHHHHHHH-HHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            34454444 37999999863   799999999999987665544     35678899988 6999999999998888765


Q ss_pred             H
Q psy4949         125 L  125 (275)
Q Consensus       125 ~  125 (275)
                      .
T Consensus        85 ~   85 (100)
T 3nxa_A           85 T   85 (100)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=97.84  E-value=4.1e-05  Score=55.63  Aligned_cols=64  Identities=13%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             HHHHHHhhc-CCCCC-eeehHHHHHHHHH---hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          62 LNWLLSAYS-VESLG-RIRVFSIKVALAT---MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        62 ~~~lf~~fD-~~~~G-~I~~~ef~~aLs~---Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +..+|+.|| ++++| .|+..|++.+|..   +......+.++.+|+.+ .|++|.|+..||..++..+.
T Consensus        12 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   81 (90)
T 1k8u_A           12 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA   81 (90)
T ss_dssp             HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            457899999 59999 9999999999986   44334456778999998 69999999999988887653

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=97.83  E-value=2.3e-05  Score=56.68  Aligned_cols=57  Identities=16%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNE  119 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~  119 (275)
                      ..+|+.||++++|.|+..+|+.+|..+......+.++.+|+.+ .|++|.|+..+|..
T Consensus        26 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~   83 (87)
T 1s6j_A           26 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA   83 (87)
T ss_dssp             TTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTT
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            4679999999999999999999998876666778889999999 68999999999843

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=97.79  E-value=3.3e-05  Score=66.15  Aligned_cols=83  Identities=11%  Similarity=0.257  Sum_probs=60.5

Q ss_pred             HHHHHhhcCCCCCc-cChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC----CChh-hHHH
Q psy4949          38 LYHNLNKRLPVSQQ-VHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCS----GKLM-DKLR   99 (275)
Q Consensus        38 lY~~~~k~~P~~~~-v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~----G~l~-dKlr   99 (275)
                      |+..+-...  .+. |+.+++..++            +.++|+.||.|++|.|+..||+.+|..+..    ..+. +.++
T Consensus        96 lf~~~D~d~--dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~  173 (214)
T 2l4h_A           96 ICRVFSTSP--AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK  173 (214)
T ss_dssp             HHHHHCCSS--SCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHH
T ss_pred             HHHHhCcCC--CCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHH
Confidence            455543332  356 7777765443            457999999999999999999999987754    1222 3333


Q ss_pred             ----Hhchhh-ccCCCceeHHHHHHHHH
Q psy4949         100 ----YIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus       100 ----~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                          .+|+.+ .|++|.|+.+||..++.
T Consensus       174 ~~~~~~~~~~D~d~dG~Is~~EF~~~~~  201 (214)
T 2l4h_A          174 QLIDNILEESDIDRDGTINLSEFQHVIS  201 (214)
T ss_dssp             HHHHHHHHHHCCSCCSSBCSHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence                489988 69999999999987765

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=97.76  E-value=8.7e-05  Score=55.35  Aligned_cols=66  Identities=23%  Similarity=0.328  Sum_probs=51.0

Q ss_pred             HhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHH
Q psy4949          88 TMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMD  161 (275)
Q Consensus        88 ~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~  161 (275)
                      .+......++++.+|+.+ .|++|.|+.+||..+|+.+       |.    ..+++.++.+|..     +|.|+.+||+.
T Consensus        21 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~----~~~~~e~~~l~~~~D~d~dG~I~~~EF~~   89 (94)
T 2kz2_A           21 LMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNL-------GE----KLTDEEVDEMIREADIDGDGQVNYEEFVQ   89 (94)
T ss_dssp             HHCCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------TC----CCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            356678889999999999 6999999999999888764       22    1234555565543     68999999999


Q ss_pred             HHh
Q psy4949         162 TMM  164 (275)
Q Consensus       162 ~~~  164 (275)
                      ++.
T Consensus        90 ~~~   92 (94)
T 2kz2_A           90 MMT   92 (94)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=97.74  E-value=0.00011  Score=75.36  Aligned_cols=130  Identities=10%  Similarity=0.121  Sum_probs=75.6

Q ss_pred             HHHHHHHHH--HHhhcCCCCCccChHHHHHHH------HHHHHHhhc-------CCCCCeeehHHHHHHHHHhcCCChhh
Q psy4949          32 ETLLSSLYH--NLNKRLPVSQQVHVEVLSGLL------LNWLLSAYS-------VESLGRIRVFSIKVALATMCSGKLMD   96 (275)
Q Consensus        32 ~~~L~~lY~--~~~k~~P~~~~v~~~~~~~l~------~~~lf~~fD-------~~~~G~I~~~ef~~aLs~Lc~G~l~d   96 (275)
                      +..|...|.  .|-++  ..|.|++++...++      +.-+++..|       .+++|.|+|.||...+..++.   .+
T Consensus       145 ~~~Lk~~F~~~~fD~d--~dG~Is~~EL~~~l~~~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~---r~  219 (799)
T 2zkm_X          145 STFLDKILVKLKMQLN--SEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RP  219 (799)
T ss_dssp             HHHHHHHHHHHHHSCC--TTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CH
T ss_pred             HHHHHHHhHHhccCCC--CCCeECHHHHHHHHhhhHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC---HH
Confidence            344666666  34443  23567766655443      345677777       488999999999999988864   57


Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCC----CCCCCchHHHhhhhc-----CCCcccHHHHHHHHhcC
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLES----PSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMSE  166 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~----~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~d  166 (275)
                      .++.+|+.| .|++|.||.++|..+|+.+..-+. +.|.    .+-...++.++.+-.     ++|.|++++|+.+++++
T Consensus       220 el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~-~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S~  298 (799)
T 2zkm_X          220 EIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSR-LNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP  298 (799)
T ss_dssp             HHHTTCC--------CCCHHHHHHHHHHTCC----------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred             HHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcc-cccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccCc
Confidence            799999999 699999999999999987422210 0111    011111233333211     36899999999999875


Q ss_pred             C
Q psy4949         167 P  167 (275)
Q Consensus       167 ~  167 (275)
                      .
T Consensus       299 ~  299 (799)
T 2zkm_X          299 E  299 (799)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=97.73  E-value=3e-05  Score=80.20  Aligned_cols=92  Identities=9%  Similarity=0.177  Sum_probs=55.2

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      .+..+++.+|.|++|+|++.||+..+..+      .+++.+|+.| .|++|.|++.||..+|+.       +|...+-..
T Consensus       775 ~~~~l~~~~D~d~dG~Is~~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~l~~-------~g~~ls~~~  841 (900)
T 1qxp_A          775 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQGIYKRFETDRSGTIGSNELPGAFEA-------AGFHLNQHI  841 (900)
T ss_dssp             HHHHHHHHHCCSSSSSBCSHHHHHHHHHH------HHHSSCC----CCSCC-------CCTTGG-------GTCCCCSCC
T ss_pred             HHHHHHHHHCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCccCHHHHHHHHHh-------cCCCCCHHH
Confidence            35678999999999999999999888654      3899999999 699999999999766653       232221111


Q ss_pred             chHHHhhhhcCCCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~d~~Is~~eFl~~~~~  165 (275)
                      .+..++.+=.++|.|+.+||+..+..
T Consensus       842 ~~~l~~~~dd~dg~Is~~EF~~~~~~  867 (900)
T 1qxp_A          842 YSMIIRRYSDETGNMDFDNFISCLVR  867 (900)
T ss_dssp             CC--------CCSCCCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeECHHHHHHHHHH
Confidence            12233332234789999999998864

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=97.72  E-value=0.00014  Score=55.87  Aligned_cols=72  Identities=10%  Similarity=0.040  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHhhc-CCCC-CeeehHHHHHHHHH-hc---CCCh-hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          55 EVLSGLLLNWLLSAYS-VESL-GRIRVFSIKVALAT-MC---SGKL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD-~~~~-G~I~~~ef~~aLs~-Lc---~G~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +.++.-+. -+|+.|| .|++ |+|+..|++.+|.. +.   +..+ .+-+..+++.+ .|+||.|+-+||..++..+..
T Consensus         6 e~~i~~l~-~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~~   84 (101)
T 3nso_A            6 EQAVAAIV-CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCL   84 (101)
T ss_dssp             HHHHHHHH-HHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence            44444433 6899998 8887 99999999999985 42   2333 45578899999 799999999999888876644


Q ss_pred             c
Q psy4949         127 I  127 (275)
Q Consensus       127 i  127 (275)
                      .
T Consensus        85 ~   85 (101)
T 3nso_A           85 Y   85 (101)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=97.70  E-value=0.00011  Score=54.66  Aligned_cols=64  Identities=9%  Similarity=0.080  Sum_probs=52.2

Q ss_pred             HHHHHHhhc-CCCCC-eeehHHHHHHHHHhcC--CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          62 LNWLLSAYS-VESLG-RIRVFSIKVALATMCS--GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        62 ~~~lf~~fD-~~~~G-~I~~~ef~~aLs~Lc~--G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +..+|+.|| ++++| +|+..|++.+|.....  ....+-++.+|+.+ .|++|.|+..||..++..+.
T Consensus        12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~~   80 (92)
T 2kax_A           12 MVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             HHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            347899999 99999 9999999999986432  23445678899988 68999999999988887653

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=97.67  E-value=4.1e-05  Score=59.61  Aligned_cols=61  Identities=16%  Similarity=0.178  Sum_probs=51.2

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.||++++|+|+..+++.+|..+  |-.++-++.+|+.. .|++|.|+.+||..++..+.
T Consensus        25 ~~~F~~~D~d~dG~Is~~el~~~l~~~--gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~   86 (110)
T 1iq3_A           25 VNQFRSLQPDPSSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDGALTLPEFCAAFHLIV   86 (110)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHCCSS--SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCeEcHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            468999999999999999999988543  44566788899988 69999999999988887553

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=97.66  E-value=0.00025  Score=57.24  Aligned_cols=61  Identities=11%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|.|+..+|+.+|..+-.....+.++.+|+.+ .|++|.|+..+|..++.
T Consensus        52 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~  113 (150)
T 2jjz_A           52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMML  113 (150)
T ss_dssp             HHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            45789999999999999999999999875555677789999998 68999999999987765

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=97.64  E-value=9.6e-05  Score=59.61  Aligned_cols=93  Identities=13%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-cc
Q psy4949          29 ARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CD  107 (275)
Q Consensus        29 ~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D  107 (275)
                      .+.+.-|..++..+..+-.-...-..++..+ -+..+|+.||.+++|.|+..||+.+|..+-.....+.++.+|..+ .|
T Consensus        18 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d   96 (147)
T 1wy9_A           18 AQQEERLEGINKQFLDDPKYSNDEDLPSKLE-AFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSG   96 (147)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHTCTTHHHHHH-HHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHHhcCcchhHHHHHHHHHH-HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC
Confidence            3555667777766643100000011222212 245789999999999999999999998875555667789999998 68


Q ss_pred             CCCceeHHHHHHHHH
Q psy4949         108 CNGHLVAWKFNEYLQ  122 (275)
Q Consensus       108 ~nG~i~~~el~~~L~  122 (275)
                      ++|.|+..+|..++.
T Consensus        97 ~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           97 SEETFSYSDFLRMML  111 (147)
T ss_dssp             CTTEECHHHHHHHHC
T ss_pred             CCCcEeHHHHHHHHH
Confidence            999999999977664

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=97.63  E-value=8.1e-05  Score=50.72  Aligned_cols=59  Identities=17%  Similarity=0.322  Sum_probs=44.4

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++++.+|+.+ .|++|.|+..|+..+++.+       +.    ..+++.++.+|..     +|.|+.+||+.++.+
T Consensus         1 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------~~----~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            1 SSAKRVFEKFDKNKDGKLSLDEFREVALAF-------SP----YFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             CTHHHHHHHHCTTSSSCEEHHHHHHHHHHT-------CT----TSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             CHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4688999999 6999999999998888753       21    2234555665543     689999999998753

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=97.58  E-value=0.00061  Score=70.60  Aligned_cols=129  Identities=12%  Similarity=0.164  Sum_probs=87.9

Q ss_pred             HHHHHHHHH--HhhcCCCCCccChHHHHHH------HHHHHHHhhcCC-------CCCeeehHHHHHHHHHhcCCChhhH
Q psy4949          33 TLLSSLYHN--LNKRLPVSQQVHVEVLSGL------LLNWLLSAYSVE-------SLGRIRVFSIKVALATMCSGKLMDK   97 (275)
Q Consensus        33 ~~L~~lY~~--~~k~~P~~~~v~~~~~~~l------~~~~lf~~fD~~-------~~G~I~~~ef~~aLs~Lc~G~l~dK   97 (275)
                      +-|.+.|..  +-+.  ..+.|++++...+      -+.-++...|.+       ++|.|+|.||...+..++.   .+-
T Consensus       150 ~~L~kaf~~~~~D~n--~dGkIs~kel~~~l~~~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~---R~E  224 (885)
T 3ohm_B          150 TFLRKAYTKLKLQVN--QDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL---RPD  224 (885)
T ss_dssp             HHHHHHHHHHHHSCC--TTSCEEHHHHHHTTGGGHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---CHH
T ss_pred             HHHHHHHHHhcCccC--CCCccCHHHHHHHHhcCHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---HHH
Confidence            446666665  3222  2356676554432      233567777876       8899999999999999886   345


Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---------CCcccHHHHHHHHhcCC
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---------NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---------d~~Is~~eFl~~~~~d~  167 (275)
                      ++.+|+.| +|++|.||.++|..+|+....-+ .+.|..-...+++.++.++++         ++.|++++|..+++++.
T Consensus       225 I~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~-~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S~~  303 (885)
T 3ohm_B          225 IDKILLEIGAKGKPYLTLEQLMDFINQKQRDP-RLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGGEE  303 (885)
T ss_dssp             HHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCT-TSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTSTT
T ss_pred             HHHHHHHHhcCCCCccCHHHHHHHHHHhcCcc-cccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccCcc
Confidence            89999999 78999999999999999863222 112211112244555555542         57899999999998754

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=97.56  E-value=8.6e-05  Score=56.64  Aligned_cols=58  Identities=19%  Similarity=0.421  Sum_probs=42.8

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHH
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTM  163 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~  163 (275)
                      .+.+|.+|+.+ .|++|.|+.+||..+|+.+       |..+    ++..++.+|.     ++|.|+.+||+..+
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-------g~~~----~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-------GYMP----NEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-------TCCC----CTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-------CCCC----CHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            34689999999 7999999999999888864       3322    2333444443     36899999999965

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=97.56  E-value=0.00028  Score=52.47  Aligned_cols=63  Identities=13%  Similarity=0.184  Sum_probs=51.5

Q ss_pred             HHHHHhhcCCCCC---eeehHHHHHHHHH-----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          63 NWLLSAYSVESLG---RIRVFSIKVALAT-----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        63 ~~lf~~fD~~~~G---~I~~~ef~~aLs~-----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      --+|..|| +++|   +|+..|++.+|..     +-.....+.++.+|+.+ .|+||.|+-+||..++..+..
T Consensus        12 ~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~~   83 (92)
T 3rm1_A           12 IDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMITT   83 (92)
T ss_dssp             HHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHH
Confidence            36899999 7666   9999999999998     44444566788999998 699999999999888876543

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=97.55  E-value=7.1e-05  Score=55.48  Aligned_cols=63  Identities=14%  Similarity=0.096  Sum_probs=48.8

Q ss_pred             HHHHHHhhcC-CCCC-eeehHHHHHHHHHhcCCCh-hhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSV-ESLG-RIRVFSIKVALATMCSGKL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~-~~~G-~I~~~ef~~aLs~Lc~G~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.||. +++| +|+..|++.+|....+..+ .+-.+.+|+.+ .|++|.|+..||..++..+
T Consensus        12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A           12 IIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3478999999 9999 9999999999932222222 23457788888 6899999999998887654

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=97.54  E-value=0.00011  Score=56.93  Aligned_cols=60  Identities=18%  Similarity=0.101  Sum_probs=51.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.||+ ++|+|+..+++.+|..+  |-..+-+..+|+.. .|+||.|+.+||..++..+.
T Consensus        18 ~~~F~~~D~-~dG~Is~~el~~~l~~~--gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~   78 (106)
T 1eh2_A           18 DAIFDSLSP-VNGFLSGDKVKPVLLNS--KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY   78 (106)
T ss_dssp             HHHHTTSCC-SSSCCBHHHHHHHHHTT--TCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCeEcHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            468999999 99999999999999754  55677789999998 69999999999988877654

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=97.52  E-value=7.4e-05  Score=51.63  Aligned_cols=62  Identities=13%  Similarity=0.296  Sum_probs=46.3

Q ss_pred             CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          92 GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        92 G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ....++++.+|+.+ .|++|.|+..+|..+++.+       |.    ..++..++.+|..     +|.|+.+||+.++.
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------~~----~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            2 RAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGL-------GQ----PLPQEELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             CTTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGT-------TC----SSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             cccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            34578899999999 6999999999998776532       21    2245556666553     68999999999874

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=97.52  E-value=0.00014  Score=51.49  Aligned_cols=61  Identities=16%  Similarity=0.356  Sum_probs=45.9

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      ++++++.+|+.+ .|++|.|++.++..+|+.+       | .    .++..++.+|..     +|.|+.+||+.++...
T Consensus         1 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-------g-~----~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            1 MADDMERIFKRFDTNGDGKISLSELTDALRTL-------G-S----TSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             --CHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------H-T----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------C-C----CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            367899999999 6999999999999988865       2 1    134445555542     6899999999998764

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=97.52  E-value=0.00015  Score=50.98  Aligned_cols=60  Identities=15%  Similarity=0.263  Sum_probs=46.2

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      -.++++.+|+.+ .|++|.|++.++..+|+.+       |.    ..++..++.+|..     +|.|+.+||+.++.
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~----~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   70 (77)
T 2joj_A            5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-------GF----DVKKPEILELMNEYDREGNGYIGFDDFLDIMT   70 (77)
T ss_dssp             HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-------TC----CCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            356889999999 6999999999999888764       21    2245556666653     68999999999874

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=97.51  E-value=0.00024  Score=53.18  Aligned_cols=77  Identities=13%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             eehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----
Q psy4949          77 IRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----  150 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----  150 (275)
                      +++.++...|..... ...++++.+|+.+ .|++|.|+..+|..+|+.+       |.    ..++..++.+|..     
T Consensus         6 ~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~----~~~~~e~~~l~~~~d~~~   73 (105)
T 1wlz_A            6 TADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRR-------VQ----ILTDEQFDRLWNEMPVNA   73 (105)
T ss_dssp             TCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------TC----CCCHHHHHHHHTTSCBCT
T ss_pred             hhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHcCCCC
Confidence            344455554444333 2357899999999 6999999999999888764       22    1245566666654     


Q ss_pred             CCcccHHHHHHHHhc
Q psy4949         151 NGKVTVNDFMDTMMS  165 (275)
Q Consensus       151 d~~Is~~eFl~~~~~  165 (275)
                      +|.|+.+||+.++..
T Consensus        74 ~g~i~~~eF~~~~~~   88 (105)
T 1wlz_A           74 KGRLKYPDFLSRFSS   88 (105)
T ss_dssp             TSCBCHHHHHHHHC-
T ss_pred             CCCCcHHHHHHHHhc
Confidence            689999999998854

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=97.50  E-value=0.0003  Score=57.34  Aligned_cols=61  Identities=18%  Similarity=0.075  Sum_probs=52.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +.-+|+.|| +++|+|+..+++.+|..  .|-..+-+..++++. .|++|.|+.+||..+++.+.
T Consensus        53 l~~~F~~fD-d~dG~Is~~El~~~l~~--~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~  114 (139)
T 2jq6_A           53 YDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIK  114 (139)
T ss_dssp             HHHHHHHSC-CSSSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-CCCCeECHHHHHHHHHH--hCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            457999999 99999999999999986  455677799999998 69999999999988877553

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=97.50  E-value=7.9e-05  Score=60.24  Aligned_cols=83  Identities=8%  Similarity=0.151  Sum_probs=59.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +..+++.||.+++  ++..++.        ..-.++++.+|+.+ .|++|.|++.||..+|+.+       |.    ..+
T Consensus        26 ~~~i~~~~d~~~~--~~~~~~l--------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~----~~~   84 (150)
T 2jjz_A           26 LAEINREFLCDQK--YSDEENL--------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKL-------GV----PKT   84 (150)
T ss_dssp             HHHHHHHHHTCGG--GSSCTTH--------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHT-------TC----CCC
T ss_pred             HHHHHHHhccCCC--chhhHhH--------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHc-------CC----CCC
Confidence            4567888888775  3332222        34567899999999 6999999999999888753       32    123


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +..++.+|..     +|.|+.+||+.++..
T Consensus        85 ~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           85 HLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             HHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            4555555543     689999999998864

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=97.49  E-value=0.00026  Score=55.54  Aligned_cols=66  Identities=12%  Similarity=0.147  Sum_probs=51.8

Q ss_pred             HHHHHHhhc-CCCCC-eeehHHHHHHHHH-----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhc
Q psy4949          62 LNWLLSAYS-VESLG-RIRVFSIKVALAT-----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAI  127 (275)
Q Consensus        62 ~~~lf~~fD-~~~~G-~I~~~ef~~aLs~-----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i  127 (275)
                      +..+|+.|| ++++| +|+..|++.+|..     +....-++-+..+++.+ .|+||.|+-+||..++.....+
T Consensus        24 l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~~~~   97 (113)
T 2lnk_A           24 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMM   97 (113)
T ss_dssp             HHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHHHH
Confidence            347899999 89997 9999999999975     22222345678888888 6999999999998888765443

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=97.49  E-value=0.00016  Score=52.15  Aligned_cols=61  Identities=15%  Similarity=0.305  Sum_probs=47.0

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      -.++++.+|+.+ .|++|.|++.++..+|+.+       |     ..++..++.+|..     +|.|+.+||+.++...
T Consensus         9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------g-----~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A            9 DIADRERIFKRFDTNGDGKISSSELGDALKTL-------G-----SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTT-------T-----TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHc-------C-----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            467899999999 6999999999998877642       2     1234556665553     6899999999998765

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=97.48  E-value=0.00036  Score=49.76  Aligned_cols=66  Identities=17%  Similarity=0.343  Sum_probs=45.7

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      ...++++.+|+.+ .|++|.|++.||..+++.+-.     ....+-...+..++.+|..     +|.|+.+||+...
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~   75 (83)
T 1yx7_A            4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDA-----YKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNAN   75 (83)
T ss_dssp             CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTT-----CTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHH
T ss_pred             cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcc-----ccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhh
Confidence            4578999999999 699999999999998886410     0111111123433346654     6899999999754

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=97.48  E-value=0.00023  Score=55.09  Aligned_cols=63  Identities=11%  Similarity=0.099  Sum_probs=50.4

Q ss_pred             HHHHHhhc-CCCC-CeeehHHHHHHHHHhcCCCh--hhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYS-VESL-GRIRVFSIKVALATMCSGKL--MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD-~~~~-G~I~~~ef~~aLs~Lc~G~l--~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.|| .+++ |+|+..|++.+|....+..+  .+-+..+|+.+ .|+||.|+-+||..++....
T Consensus        25 ~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~   92 (106)
T 2h2k_A           25 VTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   92 (106)
T ss_dssp             HHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            47899999 7986 79999999999975444333  25678888888 69999999999988877543

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=97.47  E-value=0.00035  Score=53.03  Aligned_cols=64  Identities=14%  Similarity=0.067  Sum_probs=50.6

Q ss_pred             HHHHHhhc-CCCCC-eeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          63 NWLLSAYS-VESLG-RIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        63 ~~lf~~fD-~~~~G-~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      .-+|+.|| .+++| +|+..|++.+|....+     ..-.+-++.+|+.+ .|++|.|+-.||..++.....
T Consensus        13 ~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~~   84 (99)
T 2y5i_A           13 ITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAALTV   84 (99)
T ss_dssp             HHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence            46899998 89998 9999999999975322     22345678888888 699999999999888876543

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=97.47  E-value=0.0003  Score=52.84  Aligned_cols=62  Identities=15%  Similarity=0.045  Sum_probs=49.4

Q ss_pred             HHHHHhhc-CCCCC-eeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYS-VESLG-RIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD-~~~~G-~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.|| .+++| +|+..|++.+|....+     ..-.+-++.+|+.+ .|++|.|+-.||..++...
T Consensus        15 ~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           15 VNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            46899999 89998 9999999999975321     22345578888888 6899999999998887654

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=97.46  E-value=0.00013  Score=54.10  Aligned_cols=63  Identities=14%  Similarity=0.180  Sum_probs=50.7

Q ss_pred             HHHHHHhhc-CCCCC-eeehHHHHHHHH-Hhc----CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYS-VESLG-RIRVFSIKVALA-TMC----SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD-~~~~G-~I~~~ef~~aLs-~Lc----~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +..+|+.|| .+++| .|+..||+.+|. .+.    .....+.++.+|+.+ .|++|.|+..||..++..+
T Consensus        15 l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           15 LIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            347899998 99999 999999999887 332    223455678899988 6899999999998888755

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=97.45  E-value=0.00018  Score=52.43  Aligned_cols=63  Identities=13%  Similarity=0.306  Sum_probs=47.4

Q ss_pred             CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          92 GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        92 G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..-.++++.+|+.| .|++|.|++.+|..+|+.+       |.    ..++..++.+|..     +|.|+.+||+.++..
T Consensus        16 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------g~----~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-------GQ----NPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            34467899999999 6999999999999888752       22    2245556666543     689999999998753

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=97.44  E-value=3.1e-05  Score=77.44  Aligned_cols=90  Identities=10%  Similarity=0.068  Sum_probs=23.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-+|+.||.|++|+|++.||+.+|..+-....++.++.+|+.+ .|++|.|+.+||..++..+..              
T Consensus        13 l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~--------------   78 (624)
T 1djx_A           13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ--------------   78 (624)
T ss_dssp             -------------------------------------------------------CTTHHHHHHTC--------------
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc--------------
Confidence            45678999999999999999999998776555667889999999 689999999999888875411              


Q ss_pred             hHHHhhhhcC----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~----d~~Is~~eFl~~~~~  165 (275)
                      ++.++.+|..    +|.||.+||...+..
T Consensus        79 ~~el~~aF~~fD~~~G~Is~~EL~~fL~~  107 (624)
T 1djx_A           79 RAEIDRAFEEAAGSAETLSVERLVTFLQH  107 (624)
T ss_dssp             CHHHHHHHHHHHTTSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCeecHHHHHHHHHH
Confidence            1334444543    688999998888764

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=97.44  E-value=0.00018  Score=57.26  Aligned_cols=71  Identities=11%  Similarity=0.134  Sum_probs=57.8

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHH-----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          54 VEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALAT-----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~-----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      .+.+.+-+. .+|+.||.+ +|+|+..|++.+|..     +-.....+.++.+++.. .|+||.|+-+||..++..+..
T Consensus        10 lE~~ie~l~-~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~   86 (121)
T 4drw_A           10 MEHAMETMM-FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI   86 (121)
T ss_dssp             HHHHHHHHH-HTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH
Confidence            466655554 899999988 899999999999854     44455677889999999 799999999999998876643

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=97.42  E-value=0.00024  Score=53.40  Aligned_cols=64  Identities=14%  Similarity=0.251  Sum_probs=44.9

Q ss_pred             hhHHHHhchhhc--cCC-CceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DCN-GHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~n-G~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .+.++.+|+.|+  |+| |.|+++||..+|+.  .++..+++.    .++..++.++..     ||.|+.+||+..+.
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~--~lg~~l~~~----~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~   80 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTR--ELPSFLGKR----TDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   80 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHH--HCGGGC-------CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHH--HhhhhccCC----CCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            467899999995  564 79999999988874  233323321    245566666653     79999999999774

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=97.42  E-value=0.00046  Score=51.87  Aligned_cols=70  Identities=13%  Similarity=0.101  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHhhc-CCCC-CeeehHHHHHHHHHhcCC-----ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYS-VESL-GRIRVFSIKVALATMCSG-----KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD-~~~~-G~I~~~ef~~aLs~Lc~G-----~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +.+..-+ --+|+.|| .+++ |+|+..|++.+|..-.++     .-.+-+..+++.+ .|+||.|+-+||..++..+.
T Consensus         6 e~~~~~l-~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~   83 (93)
T 4eto_A            6 EKALDVM-VSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   83 (93)
T ss_dssp             HHHHHHH-HHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            3343333 36899998 6774 899999999999863332     2355678899988 69999999999988887653

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=97.41  E-value=0.00042  Score=52.01  Aligned_cols=62  Identities=15%  Similarity=0.156  Sum_probs=47.8

Q ss_pred             HHHHHhhc-CCC-CCeeehHHHHHHHHHhcC---C-C-hhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYS-VES-LGRIRVFSIKVALATMCS---G-K-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD-~~~-~G~I~~~ef~~aLs~Lc~---G-~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.|| .++ +|+|+..|++.+|....+   | . ..+-++.+|+.+ .|++|.|+-+||..++..+
T Consensus        12 ~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A           12 IDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            36799999 788 589999999999976432   1 2 344567888888 6999999999998887754

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=97.41  E-value=0.00023  Score=54.65  Aligned_cols=64  Identities=11%  Similarity=0.173  Sum_probs=47.3

Q ss_pred             hHHHHhchhhc--cCC-CceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          96 DKLRYIFSQLC--DCN-GHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        96 dKlr~~F~ly~--D~n-G~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +.++.+|+.|+  |++ |.|+++||..+|+.-  ++..+|+.    .++..++.+|..     ||.|+.+||+..+.+
T Consensus        10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~--l~~~lg~~----~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A           10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKE--LATWTPTE----FRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHH--TTTCCCCT----TCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHH--hhhhcCCC----CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            56789999995  676 999999999988742  34434442    245667776653     799999999997743

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=97.40  E-value=0.00053  Score=52.80  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=54.3

Q ss_pred             hHHHHHHHHHHHHHhhc-CCCC-CeeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSAYS-VESL-GRIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~fD-~~~~-G~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .+.+.+-+. -+|+.|| .+++ |+|+..|++.+|....+     ..-++-+..+|+.+ .|+||.|+-+||..++..+.
T Consensus         8 le~~~~~l~-~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~   86 (104)
T 3zwh_A            8 LEKALDVMV-STFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA   86 (104)
T ss_dssp             HHHHHHHHH-HHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            344444443 6899998 6775 89999999999986332     12356688899998 69999999999988887654


Q ss_pred             h
Q psy4949         126 A  126 (275)
Q Consensus       126 ~  126 (275)
                      .
T Consensus        87 ~   87 (104)
T 3zwh_A           87 M   87 (104)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=97.38  E-value=0.0003  Score=52.31  Aligned_cols=63  Identities=16%  Similarity=0.291  Sum_probs=47.0

Q ss_pred             hHHHHhchhhccCCC---ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQLCDCNG---HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly~D~nG---~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|+.|+|++|   .|++.||..+|+..  +|..+|+.    .++..++.+|..     ||.|+.+||+.++.
T Consensus         9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~--~~~~lg~~----~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   79 (92)
T 3rm1_A            9 VALIDVFHQYSGREGDKHKLKKSELKELINNE--LSHFLEEI----KEQEVVDKVMETLDSNGDGECDFQEFMAFVA   79 (92)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHH--CTTTSCCC----CSHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcCeECHHHHHHHHHHH--hhhhccCc----ccHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            567899999986666   99999999998863  34334432    246667777653     69999999999774

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=97.38  E-value=0.0002  Score=54.12  Aligned_cols=68  Identities=9%  Similarity=0.152  Sum_probs=46.4

Q ss_pred             HHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC-------chHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          97 KLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY-------TDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        97 Klr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~-------~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      .++.+|++| .|+||.|++.+|..+++.  .+...++..++-..       .+..++.+|..     +|.||.+||+.++
T Consensus        21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~   98 (103)
T 1snl_A           21 NPKTFFILHDINSDGVLDEQELEALFTK--ELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST   98 (103)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHHHH--HHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCCCCcccHHHHHHHHHH--HHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHH
Confidence            478999999 799999999999998886  11122233221100       01346666653     6899999999988


Q ss_pred             hcC
Q psy4949         164 MSE  166 (275)
Q Consensus       164 ~~d  166 (275)
                      .++
T Consensus        99 ~~~  101 (103)
T 1snl_A           99 QRK  101 (103)
T ss_dssp             HCC
T ss_pred             hcC
Confidence            654

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=97.37  E-value=0.00024  Score=52.30  Aligned_cols=58  Identities=19%  Similarity=0.395  Sum_probs=45.5

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++++.+|+.+ .|++|.|+..||..+|+.+       |      .++..++.+|..     +|.|+.+||+.++.
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g------~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~   88 (91)
T 2pmy_A           25 ELARLRSVFAACDANRSGRLEREEFRALCTEL-------R------VRPADAEAVFQRLDADRDGAITFQEFARGFL   88 (91)
T ss_dssp             HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-------T------CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc-------C------cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            467889999999 6999999999999888753       2      234556666643     68999999999874

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=97.36  E-value=0.0002  Score=73.39  Aligned_cols=91  Identities=13%  Similarity=0.170  Sum_probs=70.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||.|++|+|+..+|+.+|..+-.....+.+..+|..+ .|++|.|+..||..++.....      +    ...+
T Consensus       728 ~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~------~----~~~~  797 (863)
T 1sjj_A          728 RASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETA------D----TDTA  797 (863)
T ss_dssp             HHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHST------T----CSSS
T ss_pred             HHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc------C----CCCH
Confidence            4689999999999999999999999875555567789999999 699999999999877754311      1    1123


Q ss_pred             HHHhhhhc----CCCcccHHHHHHHH
Q psy4949         142 TLAQEIFS----GNGKVTVNDFMDTM  163 (275)
Q Consensus       142 ~~v~~cF~----~d~~Is~~eFl~~~  163 (275)
                      ..+...|.    ++|.||.+||..++
T Consensus       798 ~~l~~aF~~~~d~~G~Is~~El~~~l  823 (863)
T 1sjj_A          798 DQVMASFKILAGDKNYITVDELRREL  823 (863)
T ss_dssp             HHHHHHHHGGGTSSSEEEHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCcCcHHHHHHHC
Confidence            34444443    26899999999987

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=97.36  E-value=1.7e-05  Score=65.69  Aligned_cols=56  Identities=11%  Similarity=0.226  Sum_probs=43.9

Q ss_pred             HHHHhchhh-cc-CCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          97 KLRYIFSQL-CD-CNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        97 Klr~~F~ly-~D-~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .++|.|.+| .| +||.|+++||..|++.+.             ..+..++.+|..     ||.||++||...+..
T Consensus        78 ~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~-------------~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~  140 (151)
T 1sra_A           78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI-------------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS-------------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             HHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc-------------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCC
Confidence            579999999 66 899999999977665331             246667777664     799999999998744

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=97.35  E-value=0.00017  Score=57.32  Aligned_cols=72  Identities=8%  Similarity=0.112  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..++++|+..--   + +..|+..||..+|+..+..+.+.     ..+.++     +.-+++..|.|+||+|+|.||+.
T Consensus        14 ie~l~~~F~~yd~---d-dG~Is~~EL~~~l~~~~~~~l~~-----~~~~~~-----v~~~i~~~D~d~DG~IdF~EF~~   79 (121)
T 4drw_A           14 METMMFTFHKFAG---D-KGYLTKEDLRVLMEKEFPGFLEN-----QKDPLA-----VDKIMKDLDQCRDGKVGFQSFFS   79 (121)
T ss_dssp             HHHHHHTTGGGSC---T-TCSCCHHHHHHHTTTSCHHHHTT-----SSCTTH-----HHHHHHHHCTTCSSCCCHHHHHH
T ss_pred             HHHHHHHHHHHcC---C-CCEEcHHHHHHHHHHHhhhhccc-----CCCHHH-----HHHHHHHHcCCCCCcCcHHHHHH
Confidence            5677788887652   2 46899999888887655444332     223233     35678899999999999999987


Q ss_pred             HHHHhc
Q psy4949          85 ALATMC   90 (275)
Q Consensus        85 aLs~Lc   90 (275)
                      .++-|+
T Consensus        80 lm~~l~   85 (121)
T 4drw_A           80 LIAGLT   85 (121)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            766554

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=97.30  E-value=8.3e-05  Score=53.05  Aligned_cols=64  Identities=25%  Similarity=0.338  Sum_probs=45.3

Q ss_pred             CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .....++++ +|+.+ .|++|.|+..+|..+|+.+       |.   ...++..++.+|..     +|.|+.+||+.++.
T Consensus         4 ~~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~-------g~---~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   72 (81)
T 1c7v_A            4 QDDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKV-------GE---EPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   72 (81)
T ss_dssp             ---CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTT-------TT---CCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             cccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHh-------CC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            456688999 99999 6899999999997766532       20   12245556666553     68999999999886


Q ss_pred             c
Q psy4949         165 S  165 (275)
Q Consensus       165 ~  165 (275)
                      .
T Consensus        73 ~   73 (81)
T 1c7v_A           73 K   73 (81)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=97.25  E-value=0.00046  Score=51.23  Aligned_cols=57  Identities=16%  Similarity=0.251  Sum_probs=43.5

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .++++.+|+.+ .|++|.|+.+|+..+++.+ .            .++..++.+|.     ++|.|+.+||+..+.
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g------------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~   70 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K------------LPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S------------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C------------CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            45788899999 6999999999999888753 1            13445555554     268999999998763

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=97.20  E-value=0.00061  Score=51.48  Aligned_cols=63  Identities=11%  Similarity=0.244  Sum_probs=47.2

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      ...++++.+|+.+ .|++|.|+..++..+|+.+       |.    ..++..++.+|..     +|.|+.+||+.++...
T Consensus        29 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~----~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~   97 (107)
T 2d58_A           29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKL-------GV----PKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK   97 (107)
T ss_dssp             HHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence            3457889999999 6999999999999888753       32    2245555555543     6899999999988653

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=97.19  E-value=0.0006  Score=49.09  Aligned_cols=61  Identities=11%  Similarity=0.081  Sum_probs=46.1

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHH---HhhhhcC-----CCcccHHHHHHHH
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTL---AQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~---v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      .-.++++.+|..| .|++|.|++.+|..+|+.+       |.    ..++..   ++.+|..     +|.|+. ||+..+
T Consensus        11 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~----~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~   78 (86)
T 1j7q_A           11 EEKDECMKIFDIFDRNAENIAPVSDTMDMLTKL-------GQ----TYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLC   78 (86)
T ss_dssp             THHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHT-------SC----CCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------cC----CCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHH
Confidence            3467899999999 6999999999999888753       32    223444   7777654     589999 999977


Q ss_pred             hc
Q psy4949         164 MS  165 (275)
Q Consensus       164 ~~  165 (275)
                      ..
T Consensus        79 ~~   80 (86)
T 1j7q_A           79 SK   80 (86)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=97.19  E-value=0.00028  Score=47.95  Aligned_cols=56  Identities=21%  Similarity=0.370  Sum_probs=41.8

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ++.+|+.+ .|++|.|+.+|+..+++.+-.-           .+++.++.+|..     +|.|+.+||+.++.
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-----------~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAI-----------KNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCC-----------CcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            35789999 6999999999999988865211           124455555553     68999999999874

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=97.17  E-value=0.0031  Score=45.72  Aligned_cols=81  Identities=16%  Similarity=0.216  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+.++|+....+   .+..|+..++..+|..+    .      ..++.++     +..+++.+|.+++|.|++.+|+.
T Consensus         8 ~~~l~~~F~~~D~d---~~G~i~~~el~~~l~~~----g------~~~~~~~-----~~~l~~~~d~~~dg~i~~~eF~~   69 (92)
T 2kn2_A            8 EEELKEAFKVFDKD---QNGYISASELRHVMINL----G------EKLTDEE-----VEQMIKEADLDGDGQVNYEEFVK   69 (92)
T ss_dssp             HHHHHHHHHHHCTT---CSSEECHHHHHHHHHHT----T------CCCCHHH-----HHHHHHHHCSSCCSSEEHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCeEcHHHHHHHHHHh----C------CCCCHHH-----HHHHHHHhCCCCCCcEeHHHHHH
Confidence            34566777776544   35679999977666543    1      1223333     35678899999999999999999


Q ss_pred             HHHHhcCCC---hhhHHHHhch
Q psy4949          85 ALATMCSGK---LMDKLRYIFS  103 (275)
Q Consensus        85 aLs~Lc~G~---l~dKlr~~F~  103 (275)
                      .+....++.   ..++++.+|+
T Consensus        70 ~~~~~~~~~~~~~~~~l~~aF~   91 (92)
T 2kn2_A           70 MMMTVRGGGGGNGWSRLRRKFS   91 (92)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHHT
T ss_pred             HHHhccCCCCCchHHHHHHHhc
Confidence            988777654   4477888885

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=97.17  E-value=0.00081  Score=52.02  Aligned_cols=63  Identities=14%  Similarity=0.066  Sum_probs=50.4

Q ss_pred             HHHHHhhcC-CCCC-eeehHHHHHHHHHhcCC---C---hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSV-ESLG-RIRVFSIKVALATMCSG---K---LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~-~~~G-~I~~~ef~~aLs~Lc~G---~---l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      ..+|+.||. +++| +|+..|++.+|....+.   .   -.+-++.+|+.+ .|++|.|+..||..++..+.
T Consensus        15 ~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   86 (113)
T 1xk4_C           15 INTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT   86 (113)
T ss_dssp             HHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence            478999994 9999 99999999999832222   1   245578899988 69999999999988887654

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=97.11  E-value=0.0007  Score=52.33  Aligned_cols=57  Identities=25%  Similarity=0.330  Sum_probs=43.5

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .++++.+|+.+ .|++|.|+..|+..+|+.             .+.++..++.+|.     ++|.|+.+||+..+.
T Consensus        13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-------------~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~   75 (111)
T 2kgr_A           13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQ-------------SSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH   75 (111)
T ss_dssp             HHHHHHHHHTTSCSSCCEEEHHHHHHHHHT-------------TCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHh-------------CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            57889999999 699999999999887761             1224455666654     368999999998763

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=97.10  E-value=0.00044  Score=52.49  Aligned_cols=59  Identities=14%  Similarity=0.258  Sum_probs=46.0

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .-.++|+.+|+++ .|++|.|+..|+..+|+..             +.++..++.+|..     +|.|+.+||+..+.
T Consensus         8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-------------~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~   72 (99)
T 1qjt_A            8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS-------------GLPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS-------------SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-------------CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            3467899999999 6999999999998888641             2245566666653     68999999999774

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=97.09  E-value=0.00043  Score=51.81  Aligned_cols=57  Identities=23%  Similarity=0.292  Sum_probs=44.0

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      -.++|+.+|+.+ .|++|.|+.+|+..+++.+             +.++..++.+|..     +|.|+.+||+..+
T Consensus         8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-------------g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~   70 (95)
T 1c07_A            8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT-------------GLPSTLLAHIWSLCDTKDCGKLSKDQFALAF   70 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTT-------------TCCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-------------CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            356789999999 6999999999998887642             1234556666653     6899999999876

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=97.06  E-value=0.0016  Score=45.29  Aligned_cols=65  Identities=17%  Similarity=0.311  Sum_probs=43.9

Q ss_pred             hhhHHHHhchhh-c-cCC-CceeHHHHHHHHHHHHhchhhccCCC--CCCCchHHHhhh-hcCCCcccHHHHHHHHhc
Q psy4949          94 LMDKLRYIFSQL-C-DCN-GHLVAWKFNEYLQDVLAIPAAVLESP--SFSYTDTLAQEI-FSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus        94 l~dKlr~~F~ly-~-D~n-G~i~~~el~~~L~~i~~i~~~~gE~~--~f~~~e~~v~~c-F~~d~~Is~~eFl~~~~~  165 (275)
                      ..++++.+|+.+ . |++ |.|+..+|..+|+.+       |..+  +-...+.....+ -.++|.|+.+||+.++..
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~-------g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   73 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-------GPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH-------GGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHh-------CCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            467899999999 4 888 999999999988865       2111  111112333332 123689999999998753

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=97.05  E-value=0.0015  Score=51.14  Aligned_cols=65  Identities=14%  Similarity=0.262  Sum_probs=46.1

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      .+.++.+|++|+  |++| .|++.||..+|+..  ++..+|+.+    +++.++.++.     +||.|+.+||+.++..
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~--l~~~lg~~~----t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRE--LPSFLGKRT----DEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHH--CGGGGTTCC----CTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHH--cchhcCCCC----CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            567899999996  7776 99999999988742  333345432    2334444443     2689999999998753

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=97.02  E-value=0.0018  Score=49.78  Aligned_cols=74  Identities=12%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+++||+... ..-.....|+..||..+|+.-   +-...  +..++.++     +.-+++.+|.|+||.|+|.||+.
T Consensus        12 ~~~l~~aF~~fD-~~dgd~G~Is~~EL~~~l~~~---lg~~l--~~~~~~~e-----v~~~i~~~D~dgDG~Idf~EF~~   80 (104)
T 3zwh_A           12 LDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRE---LPSWL--GKRTDEAA-----FQKLMSNLDSNRDNEVDFQEYCV   80 (104)
T ss_dssp             HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHH---CGGGS--CSSCCHHH-----HHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHHHHHHHHh-ccCCCCCeECHHHHHHHHHHH---cchhc--cCCCCHHH-----HHHHHHHHcCCCCCCCcHHHHHH
Confidence            566788888774 111112479999976666641   11100  01223333     45678899999999999999988


Q ss_pred             HHHHh
Q psy4949          85 ALATM   89 (275)
Q Consensus        85 aLs~L   89 (275)
                      .+..+
T Consensus        81 ~m~~~   85 (104)
T 3zwh_A           81 FLSSI   85 (104)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=97.01  E-value=0.001  Score=49.82  Aligned_cols=64  Identities=17%  Similarity=0.333  Sum_probs=46.3

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .+.++.+|++|+  |++| .|++.||..+|+..  ++..+|+.    .++..++.+|..     +|.|+.+||+.++.
T Consensus        11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~--~~~~lg~~----~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   82 (95)
T 2wcb_A           11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKE--LANTIKNI----KDKAVIDEIFQGLDANQDEQVDFQEFISLVA   82 (95)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHH--THHHHHHC----CCHHHHHHHHTTSSSSTTSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHH--hhhhcccc----ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            456899999995  6676 99999999998753  22223432    135567776654     68999999999774

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=96.99  E-value=0.0012  Score=50.02  Aligned_cols=65  Identities=18%  Similarity=0.339  Sum_probs=46.2

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+.++.+|++|+  |++| .|++.||..+|+..  ++..+|+.    .++..++.+|..     +|.|+.+||+.++..
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~--~~~~lg~~----~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   81 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAE--LTDFLMSQ----KDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA   81 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHH--SGGGGTTS----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHH--hhhhcccc----ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            456889999995  6676 99999999988753  23334432    235556666543     689999999998743

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=96.98  E-value=0.001  Score=48.46  Aligned_cols=65  Identities=15%  Similarity=0.274  Sum_probs=47.0

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .++++.+|+.|.  |++| .|++.||..+|+..  ++..+|..    .++..++.+|..     +|.|+.+||+..+..
T Consensus         8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~--~~~~~g~~----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~   80 (93)
T 1k2h_A            8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTE--LSSFLDVQ----KDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHH--THHHHHCC----CCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHH--HHHHhCCC----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            467899999994  8899 99999999988853  22223432    235556666543     789999999998743

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=96.95  E-value=0.0044  Score=47.08  Aligned_cols=76  Identities=12%  Similarity=0.128  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      +..+++||+...-+...++..|+..+|..+|+.+..    ..++ ...+     .--+.-+++.+|.|++|.|+|.||+.
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~----~~l~-~~~~-----~~ev~~~i~~~D~d~DG~Idf~EF~~   79 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELN----HMLS-DTGN-----RKAADKLIQNLDANHDGRISFDEYWT   79 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHST----TTTC-SSHH-----HHHHHHHHHHSCCCSSCCBCHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHcc----cccc-cccc-----HHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            456788898876542213578999997777665431    1111 1111     12256788999999999999999999


Q ss_pred             HHHHhc
Q psy4949          85 ALATMC   90 (275)
Q Consensus        85 aLs~Lc   90 (275)
                      .+..+.
T Consensus        80 ~m~~~~   85 (100)
T 3nxa_A           80 LIGGIT   85 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887654

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=96.88  E-value=0.0013  Score=49.42  Aligned_cols=62  Identities=11%  Similarity=0.095  Sum_probs=47.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC-----CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS-----GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-----G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      ..+|+.||. ++|+|+..|++.+|....+     ..-.+-+..+++.+ .|++|.|+-.||..++....
T Consensus        12 ~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~~   79 (96)
T 1a4p_A           12 MFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   79 (96)
T ss_dssp             HHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            468999994 6779999999999975321     22345678888888 69999999999988877543

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=96.83  E-value=0.0019  Score=49.86  Aligned_cols=65  Identities=12%  Similarity=0.202  Sum_probs=45.6

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCC-CchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFS-YTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~-~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .+.++.+|+.|.  |++| .|++.||..+|+..      +++..... .++..++.+|..     +|.|+.+||+.++..
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~------lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   84 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKD------LQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   84 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHH------TTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHH------hhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            357899999994  8899 99999999888731      12210001 235566666653     689999999998743

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=96.83  E-value=0.0016  Score=46.93  Aligned_cols=62  Identities=15%  Similarity=0.255  Sum_probs=44.6

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .++++.+|+.|.  |++| .|++.||..+|+..+  |  +|..    .++..++.+|.     ++|.|+.+||+..+.
T Consensus         9 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~--~--~g~~----~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   78 (90)
T 1k8u_A            9 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKEL--T--IGSK----LQDAEIARLMEDLDRNKDQEVNFQEYVTFLG   78 (90)
T ss_dssp             HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHS--C--CGGG----TTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhc--c--cCCC----CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            357899999994  8999 999999998887532  1  2321    12344555554     378999999999774

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=96.82  E-value=0.0053  Score=63.15  Aligned_cols=93  Identities=16%  Similarity=0.249  Sum_probs=61.7

Q ss_pred             cCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhc-cCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhh
Q psy4949          70 SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF  148 (275)
Q Consensus        70 D~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~-D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF  148 (275)
                      |.+++|+|+|.||...+..|+.   .+=++.+|+.|+ |++|.||. +|..+|+.+-.-+. +.|..-...+++.++.++
T Consensus       206 D~~~~g~L~FeEF~~f~~~L~~---R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~-~~~~~~~~~t~e~~~~iI  280 (816)
T 3qr0_A          206 DAIDLKAFDFDTFFKFYLALLE---RSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPS-LHKTLFPLYTDAQCEALI  280 (816)
T ss_dssp             CEEETTTCCHHHHHHHHHHHCC---CTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTT-SCTTTSCCCCHHHHHHHH
T ss_pred             ccCCCCcCCHHHHHHHHHhcCC---HHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccc-cccccccccCHHHHHHHH
Confidence            5667788888888888877764   345889999994 78899999 99999997532221 111110012333333332


Q ss_pred             c-----------CCCcccHHHHHHHHhcCC
Q psy4949         149 S-----------GNGKVTVNDFMDTMMSEP  167 (275)
Q Consensus       149 ~-----------~d~~Is~~eFl~~~~~d~  167 (275)
                      +           +++.|++++|..+++++.
T Consensus       281 ~kye~~~~~~~~~~g~LsldgF~~yL~S~~  310 (816)
T 3qr0_A          281 NDYESAVNKKGKKKGQLTKEGLLYFLMCEE  310 (816)
T ss_dssp             HHHHHHHHGGGCBTTEECHHHHHHHHHSGG
T ss_pred             HHhccccchhhhccCCccHHHHHHHhhccc
Confidence            1           468899999999998753

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=96.81  E-value=0.0023  Score=51.33  Aligned_cols=82  Identities=13%  Similarity=0.068  Sum_probs=50.6

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +.++|+...-+   .+..|+..++..+|..+    .      ..++.++     +..+++.+|.+++|+|++.+|+..+.
T Consensus        50 l~~~F~~~D~d---~dG~I~~~El~~~l~~~----g------~~~~~~~-----~~~l~~~~D~d~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           50 FKVKYMEFDLN---GNGDIDIMSLKRMLEKL----G------VPKTHLE-----LKRLIREVSSGSEETFSYSDFLRMML  111 (147)
T ss_dssp             HHHHHTTSCCC---TTSSEEHHHHHHHHHHT----T------CCCCHHH-----HHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred             HHHHHHHHCCC---CCCcCcHHHHHHHHHHh----C------CCCCHHH-----HHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            44455544422   34567777755555432    1      1122222     35678899999999999999998765


Q ss_pred             HhcCCChhhHHHHhchhh-ccCCCce
Q psy4949          88 TMCSGKLMDKLRYIFSQL-CDCNGHL  112 (275)
Q Consensus        88 ~Lc~G~l~dKlr~~F~ly-~D~nG~i  112 (275)
                      ..     .+.++.+|+.+ .|++|..
T Consensus       112 ~~-----~~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A          112 GK-----RSAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             SS-----GGGGGGGGGGCCCC-----
T ss_pred             Hh-----HHHHHHHHHHHccCCCCCC
Confidence            32     77889999999 5777763

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=96.78  E-value=0.0036  Score=43.59  Aligned_cols=65  Identities=20%  Similarity=0.274  Sum_probs=43.8

Q ss_pred             hhhHHHHhchhh-c-cCCC-ceeHHHHHHHHHHHHhchhhccCCC-CCCCchHHHhhh-hcCCCcccHHHHHHHHh
Q psy4949          94 LMDKLRYIFSQL-C-DCNG-HLVAWKFNEYLQDVLAIPAAVLESP-SFSYTDTLAQEI-FSGNGKVTVNDFMDTMM  164 (275)
Q Consensus        94 l~dKlr~~F~ly-~-D~nG-~i~~~el~~~L~~i~~i~~~~gE~~-~f~~~e~~v~~c-F~~d~~Is~~eFl~~~~  164 (275)
                      -.++++.+|..+ . |++| .|++.+|..+|+..+      |... +-...+.....+ -.++|.|+.+||+..+.
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~------g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   74 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEF------PSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK   74 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHC------SSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHh------hhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence            467899999999 6 8999 999999998887531      2211 111123333332 12368999999999774

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=96.76  E-value=0.0023  Score=47.87  Aligned_cols=64  Identities=13%  Similarity=0.301  Sum_probs=42.4

Q ss_pred             hhHHHHhchhhc--cC-CCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DC-NGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~-nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .+.++.+|++|.  |+ +|.|++.||..+|+..  ++..+|+.+    ++..++.+|.     ++|.|+.+||+.++.
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~--~~~~lg~~~----~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~   79 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKE--LPGFLQSGK----DKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHH--STTCC----------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHH--hHhhccccc----CHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            456889999995  66 4899999999988753  222233321    2334555443     368999999999874

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=96.74  E-value=0.0026  Score=50.58  Aligned_cols=60  Identities=13%  Similarity=0.069  Sum_probs=51.8

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.+|+ ++|+|+-.+++..+.-  .|-..+-|.-++.+. .|++|.|+++||...+.-|.
T Consensus        36 ~~iF~~lD~-~dG~Isg~elr~~~~~--sgLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li~   96 (121)
T 3fia_A           36 DQQFHSLKP-ISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIK   96 (121)
T ss_dssp             HHHHHHTCC-BTTBEEHHHHHHHHGG--GCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCeECHHHHHHHHHH--cCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence            468999999 8999999999999874  477788899999999 69999999999987777553

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=96.74  E-value=0.0015  Score=49.36  Aligned_cols=62  Identities=15%  Similarity=0.105  Sum_probs=47.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcC---C----ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCS---G----KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~---G----~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .-+|+.||.+ +|+|+..|++.+|..+..   |    .-.+-++.+|+.+ .|++|.|+-.||..++....
T Consensus        13 ~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~~   82 (100)
T 1psr_A           13 IDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIA   82 (100)
T ss_dssp             HHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            4789999976 899999999999975321   1    1233456788877 68999999999988887543

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=96.73  E-value=0.0022  Score=48.44  Aligned_cols=65  Identities=8%  Similarity=0.208  Sum_probs=43.5

Q ss_pred             hhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccC--CCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLE--SPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE--~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      .+.++.+|++|.+.+|.|++.||..+|+...  +..+|+  .+    ++..++.+|.     ++|.|+.+||+.++..
T Consensus         9 ~~~l~~~F~~fD~~~g~Is~~El~~~l~~~~--~~~lg~~~~~----~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A            9 IIGMIDMFHKYTRRDDKIDKPSLLTMMKENF--PNFLSACDKK----GTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHTCCTTSCBCHHHHHHHHHHHC--HHHHHHHHHT----TCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCeECHHHHHHHHHHHh--Hhhhcccccc----CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3568999999965589999999999998631  222232  11    1223333333     3689999999998743

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=96.73  E-value=0.0012  Score=48.59  Aligned_cols=63  Identities=13%  Similarity=0.243  Sum_probs=41.6

Q ss_pred             hhHHHHhchhh-c-cCCC-ceeHHHHHHHH-HHHHhchhhccCCCCCCCchHHHhhhh-cCCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQL-C-DCNG-HLVAWKFNEYL-QDVLAIPAAVLESPSFSYTDTLAQEIF-SGNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly-~-D~nG-~i~~~el~~~L-~~i~~i~~~~gE~~~f~~~e~~v~~cF-~~d~~Is~~eFl~~~~  164 (275)
                      .++++.+|+.| . |++| .|++.||..+| +.+   +..+.+    ...+...+.+= .++|.|+.+||+.++.
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~---g~~~~~----~~~~~l~~~~D~d~dG~I~~~EF~~~~~   76 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETES---PQYIRK----KGADVWFKELDINTDGAVNFQEFLILVI   76 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHS---CHHHHT----TCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHC---cccCCH----HHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            45789999999 6 8999 99999999888 432   111111    11122222221 2368999999999874

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=96.72  E-value=0.00026  Score=55.80  Aligned_cols=75  Identities=16%  Similarity=0.161  Sum_probs=38.8

Q ss_pred             CCeeehHHHHH-----HHHHh-cCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhh
Q psy4949          74 LGRIRVFSIKV-----ALATM-CSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI  147 (275)
Q Consensus        74 ~G~I~~~ef~~-----aLs~L-c~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~c  147 (275)
                      +|.|+|.+|..     .+.-. ......++++.+|+++ |  |.|+..+|..+|+.       +|+      ++..++.+
T Consensus        22 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~f-D--G~I~~~El~~~l~~-------lG~------t~~ei~~~   85 (123)
T 2kld_A           22 KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQG-G--GKLNFDELRQDLKG-------KGH------TDAEIEAI   85 (123)
T ss_dssp             -----------------------------CCSCSSTTT-T--TCEEHHHHHHHTTT-------CCS------SHHHHHHH
T ss_pred             CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHh-C--CCCCHHHHHHHHHH-------hCC------CHHHHHHH
Confidence            78999999987     44432 2334456789999998 4  99999998766543       343      45555665


Q ss_pred             hcC-----CCcccHHHHHHHHh
Q psy4949         148 FSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       148 F~~-----d~~Is~~eFl~~~~  164 (275)
                      |..     +|.|+.+||+..+.
T Consensus        86 ~~~~D~d~dG~I~~~EF~~~~~  107 (123)
T 2kld_A           86 FTKYDQDGDQELTEHEHQQMRD  107 (123)
T ss_dssp             HHHHSSSSCCEECSHHHHHCSC
T ss_pred             HHHHcCCCCCcCcHHHHHHHHH
Confidence            543     68999999999763

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=96.71  E-value=0.0036  Score=46.28  Aligned_cols=61  Identities=8%  Similarity=0.212  Sum_probs=43.4

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .+.++.+|+.|.  |++| .|+++||..+|+...  +  +++ +    ++..++.+|.     ++|.|+.+||+.++.
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~--~--~~~-~----~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~   77 (92)
T 2kax_A            9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKEL--C--LGE-M----KESSIDDLMKSLDKNSDQEIDFKEYSVFLT   77 (92)
T ss_dssp             HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHS--C--CTT-T----CCTTHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHc--C--CCC-C----CHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            357899999996  7889 999999999887532  1  222 1    2233444443     368999999999874

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=96.66  E-value=0.0024  Score=51.86  Aligned_cols=57  Identities=16%  Similarity=0.229  Sum_probs=44.8

Q ss_pred             hhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .++|+.+|+++.|+||.|+..++..+|+. ..+            ++..++.++.     +||.|+.+||+..+.
T Consensus        50 ~~~l~~~F~~fDd~dG~Is~~El~~~l~~-~gl------------~~~el~~I~~~~D~d~dG~Ld~~EF~~am~  111 (139)
T 2jq6_A           50 KPTYDEIFYTLSPVNGKITGANAKKEMVK-SKL------------PNTVLGKIWKLADVDKDGLLDDEEFALANH  111 (139)
T ss_dssp             HHHHHHHHHHSCCSSSEEEHHHHHHHHHH-TTC------------CHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCeECHHHHHHHHHH-hCc------------CHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            67799999999989999999999988875 222            3445666665     378999999998763

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=96.56  E-value=0.0023  Score=47.97  Aligned_cols=65  Identities=15%  Similarity=0.332  Sum_probs=44.8

Q ss_pred             hhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      .+.++.+|++|++.+|.|++.||..+|+..  ++..+|+.+    ++..++.+|.     ++|.|+.+||+.++..
T Consensus         8 ~~~l~~~F~~fD~~dg~Is~~El~~~l~~~--~~~~lg~~~----~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   77 (96)
T 1a4p_A            8 METMMFTFHKFAGDKGYLTKEDLRVLMEKE--FPGFLENQK----DPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (96)
T ss_dssp             HHHHHHHHHHHHGGGCSBCHHHHHHHHHHH--CHHHHHHSC----CTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCeECHHHHHHHHHHH--ccccccccc----CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            356889999996578899999999988753  232234322    2334444443     3689999999998743

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=96.51  E-value=0.0012  Score=51.23  Aligned_cols=58  Identities=12%  Similarity=0.140  Sum_probs=41.5

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      -.++|+.+|+.+ .|++|.|+.+|+..+|+.+       +      .+++.++.+|.     ++|.|+.+||+..+.
T Consensus        20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-------g------l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~   83 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKS-------K------LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS-------S------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-------C------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            356789999999 6999999999997766431       1      12223444443     378999999998763

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=96.49  E-value=0.00047  Score=54.25  Aligned_cols=52  Identities=15%  Similarity=0.238  Sum_probs=42.9

Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .|+.||    |+|+..+++.+|..+  |..++.++.+|+.+ .|++|.|+..||..++.
T Consensus        55 aF~~fD----G~I~~~El~~~l~~l--G~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~  107 (123)
T 2kld_A           55 SLRQGG----GKLNFDELRQDLKGK--GHTDAEIEAIFTKYDQDGDQELTEHEHQQMRD  107 (123)
T ss_dssp             SSTTTT----TCEEHHHHHHHTTTC--CSSHHHHHHHHHHHSSSSCCEECSHHHHHCSC
T ss_pred             HHHHhC----CCCCHHHHHHHHHHh--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            577788    999999999998765  33677889999999 69999999999965543

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=96.41  E-value=0.0034  Score=56.20  Aligned_cols=93  Identities=13%  Similarity=0.115  Sum_probs=65.2

Q ss_pred             CCCHHHHHHHHHH-HHHHHhhcCCCCCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHh---
Q psy4949          25 DVSVARFETLLSS-LYHNLNKRLPVSQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATM---   89 (275)
Q Consensus        25 ~l~~~~l~~~L~~-lY~~~~k~~P~~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~L---   89 (275)
                      .+++......+.. +|..|-++.  .|.|++.+++.-           =+.|+|+.|| |++|.|+-.|+...|..+   
T Consensus       123 ~v~~~~~~~~~a~~lf~~FD~~~--~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i  199 (261)
T 1eg3_A          123 LVNVPLCVDMCLNWLLNVYDTGR--TGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQI  199 (261)
T ss_dssp             TCCHHHHHHHHHHHHHHHHCTTC--CSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHH
T ss_pred             cCCchhhHHHHHHHHHHHccCCC--CceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHH
Confidence            4566655554444 566665542  367887664322           3569999999 999999999987766331   


Q ss_pred             ----------cCCChhhHHHHhchhhccCCCceeHHHHHHHH
Q psy4949          90 ----------CSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYL  121 (275)
Q Consensus        90 ----------c~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L  121 (275)
                                ...++++..+-+|+.. |++|.||.+||..-+
T Consensus       200 ~~~vge~~~~~~~~~e~~v~~~F~~~-d~dg~It~~EFl~~~  240 (261)
T 1eg3_A          200 PRQLGEVASFGGSNIEPSVRSCFQFA-NNKPEIEAALFLDWM  240 (261)
T ss_dssp             HHHTTCGGGGTCSCCHHHHHHHHHHT-TTCSCBCHHHHHHHH
T ss_pred             HHhcCCcccCCCCCHHHHHHHHHHhC-CCCCcCCHHHHHHHH
Confidence                      1235778889999877 799999999986544

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=96.33  E-value=0.0025  Score=46.92  Aligned_cols=64  Identities=14%  Similarity=0.322  Sum_probs=44.2

Q ss_pred             hhHHHHhchhhc--cCCC-ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLC--DCNG-HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~--D~nG-~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .++++.+|..|.  |++| .|++.||..+|+.  .++..++..    .++..++.+|..     +|.|+.+||+..+.
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~--~~~~~~~~~----~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~   83 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNT--ELAAFTQNQ----KDPGVLDRMMKKLDLDSDGQLDFQEFLNLIG   83 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTT--TSHHHHHHC----CCTHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHH--Hcchhcccc----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            457899999994  7789 9999999888762  122222221    134455555543     68999999999774

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=96.31  E-value=0.0062  Score=46.82  Aligned_cols=57  Identities=21%  Similarity=0.321  Sum_probs=42.9

Q ss_pred             hhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .++|+.+|+.+..+||.|+..|+..+|+..             +.+++.+..++.     ++|.|+.+||+..+.
T Consensus        14 ~~~~~~~F~~~D~~dG~Is~~el~~~l~~~-------------gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~   75 (106)
T 1eh2_A           14 KAKYDAIFDSLSPVNGFLSGDKVKPVLLNS-------------KLPVDILGRVWELSDIDHDGMLDRDEFAVAMF   75 (106)
T ss_dssp             HHHHHHHHTTSCCSSSCCBHHHHHHHHHTT-------------TCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCeEcHHHHHHHHHHc-------------CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            456788999994499999999998888741             223555666665     378999999998763

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=96.30  E-value=0.01  Score=48.86  Aligned_cols=57  Identities=9%  Similarity=0.093  Sum_probs=48.4

Q ss_pred             HHHHHHHhhcCC-CCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHH
Q psy4949          61 LLNWLLSAYSVE-SLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNE  119 (275)
Q Consensus        61 ~~~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~  119 (275)
                      .+.|.|..||.| +||.|+-.|++..+..+-  .++.-.+-.|... .|+||.||.+|+..
T Consensus        78 ~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~  136 (151)
T 1sra_A           78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAG  136 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             HHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence            678999999997 999999999987775442  6777788899988 79999999999853

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=95.94  E-value=0.01  Score=60.90  Aligned_cols=85  Identities=14%  Similarity=0.144  Sum_probs=62.7

Q ss_pred             HHHHHH--hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhc--------cCCCceeHHHHHHHHHHHHhchhhc
Q psy4949          62 LNWLLS--AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC--------DCNGHLVAWKFNEYLQDVLAIPAAV  131 (275)
Q Consensus        62 ~~~lf~--~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~--------D~nG~i~~~el~~~L~~i~~i~~~~  131 (275)
                      +.-.|.  .||.|++|+|++.|++.+|..     ..+.++-+++.+.        |++|.|+-+||..+++.+.      
T Consensus       148 Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~------  216 (799)
T 2zkm_X          148 LDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC------  216 (799)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS------
T ss_pred             HHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc------
Confidence            445566  899999999999999988753     3566777777663        7889999999998887641      


Q ss_pred             cCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         132 LESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       132 gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                              .++.++.+|..     +|.||.+||.+.+..
T Consensus       217 --------~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~  247 (799)
T 2zkm_X          217 --------PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQ  247 (799)
T ss_dssp             --------CCHHHHTTCC--------CCCHHHHHHHHHH
T ss_pred             --------CHHHHHHHHHHhccCCCCeEcHHHHHHHHHH
Confidence                    12455666664     478999998887765

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=95.85  E-value=0.017  Score=44.31  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHcC-CCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFRENG-LNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~~-l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      +..+.+||+... -+.  ....|+..+|..+|...+   ....|+     .++     +.-+++.+|.|++|.|+|.||+
T Consensus        21 ~~~l~~aF~~fD~~dg--~~G~Is~~EL~~~l~~~l---g~~~~~-----~~e-----v~~li~~~D~d~dG~Idf~EF~   85 (106)
T 2h2k_A           21 IETVVTTFFTFARQEG--RKDSLSVNEFKELVTQQL---PHLLKD-----VGS-----LDEKMKSLDVNQDSELKFNEYW   85 (106)
T ss_dssp             HHHHHHHHHHHHTSSS--STTEECHHHHHHHHHHHC---TTTTTT-----CCC-----HHHHHHHHCTTCSSSEEHHHHH
T ss_pred             HHHHHHHHHHHcccCC--CCCEECHHHHHHHHHHHc---CcCCCC-----HHH-----HHHHHHHHCCCCCCCCcHHHHH
Confidence            344566665554 221  113688888555554321   111111     111     3456788999999999999999


Q ss_pred             HHHHHhcCCChhhHH
Q psy4949          84 VALATMCSGKLMDKL   98 (275)
Q Consensus        84 ~aLs~Lc~G~l~dKl   98 (275)
                      ..+.....+.-.+|.
T Consensus        86 ~~~~~~~~~~~~ek~  100 (106)
T 2h2k_A           86 RLIGELAKEIRKKKD  100 (106)
T ss_dssp             HHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhhHHHH
Confidence            998877665555554

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=95.14  E-value=0.018  Score=59.29  Aligned_cols=88  Identities=14%  Similarity=0.064  Sum_probs=62.9

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh--------ccCCCceeHHHHHHHHHHHHhchhhccC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL--------CDCNGHLVAWKFNEYLQDVLAIPAAVLE  133 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly--------~D~nG~i~~~el~~~L~~i~~i~~~~gE  133 (275)
                      -.|+-..||.|++|+|++.|+...+..+  +....++..+++..        .|++|.|+-+||..+++.+.        
T Consensus       157 ~~~~~~~fd~n~dG~Is~kEl~~~l~~~--~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~--------  226 (816)
T 3qr0_A          157 KLYFRLTTVEMEKNKIPVKAIQKCLSKD--KDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL--------  226 (816)
T ss_dssp             HHHHHHHHTSCCSSEEEHHHHHHHHCSC--HHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC--------
T ss_pred             HHHHHHhccCCCCCCCCHHHHHHHHHhc--CChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC--------
Confidence            4688888999999999999999866532  21223466666655        35689999999999988641        


Q ss_pred             CCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         134 SPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       134 ~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                            ..+.++.+|..     ++.||. ||.+.+...
T Consensus       227 ------~R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~  257 (816)
T 3qr0_A          227 ------ERSEIEGIFKELSKNKGNITTV-MFRDFLNDM  257 (816)
T ss_dssp             ------CCTHHHHHHHHHTTTSSSEEHH-HHHHHHHHT
T ss_pred             ------CHHHHHHHHHHHccCCCCcccH-HHHHHHHHh
Confidence                  12345666653     357999 999988764

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=94.93  E-value=0.0028  Score=55.67  Aligned_cols=56  Identities=11%  Similarity=0.229  Sum_probs=40.3

Q ss_pred             HHHHhchhh-c-cCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHhc
Q psy4949          97 KLRYIFSQL-C-DCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMS  165 (275)
Q Consensus        97 Klr~~F~ly-~-D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~~  165 (275)
                      -++|+|+.| . |+||.|++.||..|++.+       .      ..+.-++.+|.     +|+.||++||...+..
T Consensus       156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l-------~------~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~  218 (229)
T 1nub_A          156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL-------I------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  218 (229)
T ss_dssp             HHHHHHHHHTTTTCSSEECTTTTGGGGSTT-------S------TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHHH-------h------hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhCC
Confidence            479999999 5 789999999997766421       1      12334444444     3799999999997743

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=94.78  E-value=0.016  Score=50.80  Aligned_cols=59  Identities=8%  Similarity=0.071  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhhcC-CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHH
Q psy4949          59 GLLLNWLLSAYSV-ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNE  119 (275)
Q Consensus        59 ~l~~~~lf~~fD~-~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~  119 (275)
                      ...+.|+|..||. |+||.|+-.|++..+..|-  .++.-.+.+|+.. .|+||.||..|+..
T Consensus       154 ~~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~  214 (229)
T 1nub_A          154 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAG  214 (229)
T ss_dssp             HHHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred             hHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHH
Confidence            3467899999999 8999999999988775442  3666677888877 68999999999854

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=93.83  E-value=0.27  Score=50.99  Aligned_cols=113  Identities=12%  Similarity=0.167  Sum_probs=79.3

Q ss_pred             HHHHHHH--cCCCCcCCCCCCCHHHHHHHHHH----HHHHHhh-cCC-------CCCccChHHHHHHHH--------HHH
Q psy4949           8 VIEAFRE--NGLNAIELQSDVSVARFETLLSS----LYHNLNK-RLP-------VSQQVHVEVLSGLLL--------NWL   65 (275)
Q Consensus         8 ~~e~f~~--~~l~~~~~~~~l~~~~l~~~L~~----lY~~~~k-~~P-------~~~~v~~~~~~~l~~--------~~l   65 (275)
                      +-++|++  ...|   .+..|++.++..+|..    +...+.. +.+       ..+.++-+++.+++.        .-+
T Consensus       152 L~kaf~~~~~D~n---~dGkIs~kel~~~l~~~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~R~EI~ei  228 (885)
T 3ohm_B          152 LRKAYTKLKLQVN---QDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLRPDIDKI  228 (885)
T ss_dssp             HHHHHHHHHHSCC---TTSCEEHHHHHHTTGGGHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSCCHHHHHH
T ss_pred             HHHHHHHhcCccC---CCCccCHHHHHHHHhcCHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCCHHHHHHH
Confidence            4457766  3333   3567888887765553    3333321 111       224577888888874        458


Q ss_pred             HHhhcCCCCCeeehHHHHHHHHHhcCCC----------hhhHHHHhchhh-cc----CCCceeHHHHHHHHHH
Q psy4949          66 LSAYSVESLGRIRVFSIKVALATMCSGK----------LMDKLRYIFSQL-CD----CNGHLVAWKFNEYLQD  123 (275)
Q Consensus        66 f~~fD~~~~G~I~~~ef~~aLs~Lc~G~----------l~dKlr~~F~ly-~D----~nG~i~~~el~~~L~~  123 (275)
                      |+.||.+++|.|++.+|+..|.-.-+..          -.+..+.++.-| .|    ++|.|+.++|..+|.+
T Consensus       229 F~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          229 LLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             HHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred             HHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence            9999999999999999999999886542          235678888888 45    5799999999999864

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=93.72  E-value=0.23  Score=39.23  Aligned_cols=61  Identities=13%  Similarity=0.250  Sum_probs=44.3

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          25 DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        25 ~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      .|+..|. .-+.++|..+.+   ..|.|+.+++.+++         +.-+++.-|.|++|+|++.||.+|+-++
T Consensus        26 ~it~ee~-~~y~~iF~~lD~---~dG~Isg~elr~~~~~sgLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           26 AITVEER-AKHDQQFHSLKP---ISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             CCCHHHH-HHHHHHHHHTCC---BTTBEEHHHHHHHHGGGCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CCCHHHH-HHHHHHHHHhCC---CCCeECHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4565553 335667777643   34677766665553         4568999999999999999999999865

>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3

Probab=91.80  E-value=0.086  Score=39.38  Aligned_cols=32  Identities=25%  Similarity=0.723  Sum_probs=28.0

Q ss_pred             CcccCcCCCCccccceeeeccCCCCccchhhhhC
Q psy4949         190 PIACDACGRANFVGFRYRCAKCGNFQMCQECFWW  223 (275)
Q Consensus       190 ~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~  223 (275)
                      ...|++|+. .+.|.+|+|..| ||+|=..|...
T Consensus        47 ~~~C~~C~~-~~~~~~Y~C~~C-~f~lH~~Ca~~   78 (89)
T 1v5n_A           47 VYTCDKCEE-EGTIWSYHCDEC-DFDLHAKCALN   78 (89)
T ss_dssp             SCCCTTTSC-CCCSCEEECTTT-CCCCCHHHHHC
T ss_pred             CeEeCCCCC-cCCCcEEEcCCC-CCeEcHHhcCC
Confidence            478999998 578999999998 79999999854

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=87.07  E-value=1.3  Score=36.29  Aligned_cols=57  Identities=16%  Similarity=0.293  Sum_probs=40.5

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcCCCcccHHHHHHHHh
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMM  164 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~d~~Is~~eFl~~~~  164 (275)
                      ++.+|+.+ .|.||.|+..|-..+|++-++.-         +..+. -......|..||++|+.+..+
T Consensus        17 i~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~---------d~~~k-~~~~h~~D~~Isv~eLw~~W~   74 (150)
T 2l5y_A           17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYK---------DATNK-HSHLHREDKHITIEDLWKRWK   74 (150)
T ss_dssp             HHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTT---------CSHHH-HHHHTTTCCCBCHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcHHHHHHHHHHHhccc---------CchhH-HhhhcCCCCeeeHHHHHHHHc
Confidence            47788988 68999999999999999864421         11222 223334588999999888654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	275
d1eg3a2	97	a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapie	1e-34
d1eg3a1	125	a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapien	3e-32
d2dipa1	85	g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing p	2e-12
d2fc7a1	69	g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing p	3e-11
d1tota1	52	g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse	9e-08
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	0.002
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	0.002

>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 1e-34
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 7/98 (7%)

Query: 94  LMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD--TLAQEIF--- 148
           L DK RY+F Q+    G     +    L D + IP  + E  SF  ++     +  F   
Sbjct: 2   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA 61

Query: 149 SGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVES 186
           +   ++    F+D M  EP    ++WLP+LHR+ A E+
Sbjct: 62  NNKPEIEAALFLDWMRLEPQ--SMVWLPVLHRVAAAET 97

>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 3e-32
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 1   HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
             + +    +A  ++ L   +    + + +    L+++Y  L +       V+V +   +
Sbjct: 38  DLLSLSAACDALDQHNLKQND--QPMDILQIINCLTTIYDRLEQEHN--NLVNVPLCVDM 93

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMC 90
            LNWLL+ Y     GRIRV S K  + ++C
Sbjct: 94  CLNWLLNVYDTGRTGRIRVLSFKTGIISLC 123

>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: Zinc finger ZZ-type-containing protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 2e-12
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 189 HPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTR 248
             I C+ C +    G  Y+C +C  + +CQECF        H      K N     L  R
Sbjct: 23  LGIPCNNCKQFPIEGKCYKCTECIEYHLCQECF-DSYCHLSHTFTFREKRNQKWRSLEKR 81

>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: Zinc finger ZZ-type-containing protein 3, ZZZ3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 3e-11
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 4/57 (7%)

Query: 185 ESTSHP-IACDACGRANFVGFRYRCAKCG---NFQMCQECFWWGRVSGGHNLEHEVK 237
               H    CD CG     G R+ C  C    +   C  C      +  H  +H+++
Sbjct: 8   GFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLE 64

>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]} Length = 52

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: CREB-binding protein, CBP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.6 bits (108), Expect = 9e-08
 Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFW 222
           C+ C     V  R+ C  C ++ +C  C+ 
Sbjct: 9   CNECKH--HVETRWHCTVCEDYDLCINCYN 36

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 61  LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNE 119
               +   +     G I      +AL+    GKL  KL++ FS    D NG++   +  E
Sbjct: 60  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 119

Query: 120 YLQDVLAIPAAVLESPS-FSYTDTLAQEIFS-----GNGKVTVNDFMDTMMSEP 167
            +Q +  + ++V++ P   S  +   ++IF       +GK+++ +F+    S+P
Sbjct: 120 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP 173

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 14/85 (16%)

Query: 87  ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ 145
               + K +D ++  F  +  D +G +   +   +LQ+            + + TD   +
Sbjct: 31  KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQN--------FSPSARALTDAETK 82

Query: 146 EIFS-----GNGKVTVNDFMDTMMS 165
              +     G+G + V++F   + +
Sbjct: 83  AFLADGDKDGDGMIGVDEFAAMIKA 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	275
d1eg3a2	97	Dystrophin {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1eg3a1	125	Dystrophin {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.76
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.75
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.71
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.71
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.71
d2fc7a1	69	Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu	99.66
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.66
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.63
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.62
d2dipa1	85	Zinc finger ZZ-type-containing protein 2 {Human (H	99.52
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	99.21
d1tota1	52	CREB-binding protein, CBP {Mouse (Mus musculus) [T	99.17
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.13
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.11
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.98
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.88
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.8
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.77
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.77
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	98.77
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.75
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.73
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.72
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.71
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.7
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.7
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.7
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.67
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.66
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.65
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	98.64
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.62
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.58
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.58
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.54
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.48
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.46
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.46
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.44
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.44
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.43
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.41
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.41
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.38
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	98.37
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	98.37
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.37
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.36
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.36
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	98.36
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.34
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.34
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.34
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.34
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.33
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	98.32
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.31
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.3
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.29
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	98.27
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.23
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	98.23
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.21
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.2
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.2
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.2
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.19
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.16
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.13
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.11
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.08
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.08
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.06
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.04
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.01
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.01
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.01
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	97.99
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	97.98
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.97
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	97.94
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	97.93
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	97.91
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	97.9
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	97.9
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	97.89
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	97.88
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	97.87
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	97.84
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	97.83
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	97.83
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	97.83
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	97.81
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	97.78
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	97.77
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	97.74
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	97.7
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	97.69
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	97.69
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	97.68
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	97.67
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	97.64
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	97.63
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	97.58
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	97.58
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	97.55
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	97.54
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	97.54
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	97.51
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.5
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	97.48
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	97.48
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	97.48
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	97.47
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	97.47
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	97.45
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	97.44
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	97.4
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	97.4
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	97.4
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	97.39
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	97.38
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	97.37
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	97.36
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	97.28
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	97.23
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	97.11
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	97.08
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	97.08
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	97.0
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	96.96
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	96.96
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	96.92
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	96.89
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	96.88
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	96.87
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	96.82
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	96.76
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	96.74
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	96.73
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	96.7
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	96.66
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	96.59
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	96.52
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	96.3
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	96.28
d1v5na_	89	Pdi-like hypothetical protein At1g60420 {Thale cre	96.18
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	96.08
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	95.82
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	95.8
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	95.78
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	95.35
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.21
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	94.93
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	94.39
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	94.27
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	94.23
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	93.2
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	93.07
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	85.96
d2cuqa1	32	Four and a half LIM domains 3, FHL3 {Human (Homo s	85.84
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	81.07

>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.6e-31  Score=199.63  Aligned_cols=92  Identities=32%  Similarity=0.561  Sum_probs=86.9

Q ss_pred             ChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc--hHHHhhhhcC---CCcccHHHHHHHHhcCC
Q psy4949          93 KLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT--DTLAQEIFSG---NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus        93 ~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~--e~~v~~cF~~---d~~Is~~eFl~~~~~d~  167 (275)
                      .|+|||||+|++|+|+||.+++++|+.+|+++++||+++||.++||++  |++|++||++   ...|++++|++|+++| 
T Consensus         1 ~L~dKyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~~~~~i~~~~FL~wl~~e-   79 (97)
T d1eg3a2           1 HLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLE-   79 (97)
T ss_dssp             CHHHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHHHTC-
T ss_pred             CHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccCCCCcccHHHHHHHHHhC-
Confidence            489999999999999999999999999999999999999999999987  8999999985   4689999999999987 


Q ss_pred             CCcccchhhhhhcccccCC
Q psy4949         168 GPACLIWLPLLHRLTAVES  186 (275)
Q Consensus       168 ~Pq~lvWL~~~~r~~~~~~  186 (275)
                       ||+++|||++||++++|.
T Consensus        80 -Pq~LvWLp~lHRla~aEt   97 (97)
T d1eg3a2          80 -PQSMVWLPVLHRVAAAET   97 (97)
T ss_dssp             -CTTTTHHHHHHHHHHHCC
T ss_pred             -CCceehHHHHHHHHHhcC
Confidence             899999999999999874

>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-25  Score=179.44  Aligned_cols=88  Identities=24%  Similarity=0.494  Sum_probs=84.0

Q ss_pred             CcchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehH
Q psy4949           1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVF   80 (275)
Q Consensus         1 hlvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~   80 (275)
                      ||||+|+|+|||++|||++.  +..++++|++++|++||++++++.|.  +||++.++++++|||+++||++|+|+|+++
T Consensus        38 ~lv~l~~~~e~f~~~~l~~~--d~~l~v~~l~~~L~~iy~~l~~~~~~--~v~vp~~~dl~LN~LlnvYD~~rtG~i~vl  113 (125)
T d1eg3a1          38 DLLSLSAACDALDQHNLKQN--DQPMDILQIINCLTTIYDRLEQEHNN--LVNVPLCVDMCLNWLLNVYDTGRTGRIRVL  113 (125)
T ss_dssp             GGCCHHHHHHHHHHTTCCCT--TSEEEHHHHHHHHHHHHHHHHHHSTT--TCCHHHHHHHHHHHHHHHHCTTCCSEEEHH
T ss_pred             chhhHHHHHHHHHHcCCCCC--ccCCCHHHHHHHHHHHHHHhhhhCcc--cCChHHHHHHHHHHHHHHhCCCCCCeeeeh
Confidence            79999999999999999965  57899999999999999999999984  899999999999999999999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy4949          81 SIKVALATMCSG   92 (275)
Q Consensus        81 ef~~aLs~Lc~G   92 (275)
                      |||+||++||+.
T Consensus       114 s~KvaL~~LC~a  125 (125)
T d1eg3a1         114 SFKTGIISLCKA  125 (125)
T ss_dssp             HHHHHHHHTSSS
T ss_pred             HHHHHHHHHhCC
Confidence            999999999973

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=1.9e-18  Score=145.01  Aligned_cols=138  Identities=16%  Similarity=0.294  Sum_probs=113.4

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhch
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFS  103 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~  103 (275)
                      |+.||++|.+.+|+ |.|+.+++..+           .+..||+.||.|++|.|++.||+.+++.++.++.++|++++|+
T Consensus        23 i~~~~~~F~~~~~~-G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~  101 (189)
T d1jbaa_          23 LQEWYKKFLEECPS-GTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK  101 (189)
T ss_dssp             HHHHHHHHHSSSTT-CCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHH
T ss_pred             HHHHHHHhcccCCC-CeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHh
Confidence            89999999999998 67888887655           3467999999999999999999999999999999999999999


Q ss_pred             hh-ccCCCceeHHHHHHHHHHHHhchhhccCCC------CCCCchHHHhhhhcC-----CCcccHHHHHHHHhcCCCCcc
Q psy4949         104 QL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESP------SFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEPGPAC  171 (275)
Q Consensus       104 ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~------~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~~Pq~  171 (275)
                      +| .|++|.|++.++..+++.+.++........      .....++.++.+|..     +|.||.+||++|+.++  |..
T Consensus       102 ~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~--p~i  179 (189)
T d1jbaa_         102 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD--KWV  179 (189)
T ss_dssp             HHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT--TTH
T ss_pred             hhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC--HHH
Confidence            99 799999999999999998877654222211      111236778888874     7899999999999876  544


Q ss_pred             cchh
Q psy4949         172 LIWL  175 (275)
Q Consensus       172 lvWL  175 (275)
                      +.+|
T Consensus       180 ~~~l  183 (189)
T d1jbaa_         180 MKML  183 (189)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4333

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=5.6e-18  Score=142.49  Aligned_cols=144  Identities=15%  Similarity=0.244  Sum_probs=116.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMC   90 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc   90 (275)
                      .+..+..|    |..||..|.+.+|+ +.++..++..++            ++.||+.||.+++|.|++.||+.+++.++
T Consensus        19 ~t~fs~~E----i~~l~~~F~~~~~~-G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~   93 (190)
T d1fpwa_          19 STYFDRRE----IQQWHKGFLRDCPS-GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTS   93 (190)
T ss_dssp             TCCSTHHH----HHHHHHHHHHHCTT-CCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHS
T ss_pred             HcCCCHHH----HHHHHHHHHHHCCC-CCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHc
Confidence            44567777    78889999888887 677877765543            56799999999999999999999999999


Q ss_pred             CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCC-CCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLES-PSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~-~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      .++.++|++++|++| .|++|.|++.|+..+++.+.++....... ..-...++.++.+|..     ||.||.+||.+|+
T Consensus        94 ~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~  173 (190)
T d1fpwa_          94 RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGS  173 (190)
T ss_dssp             CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHH
T ss_pred             cCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            999999999999999 79999999999999999887765322221 1112236788888875     6899999999999


Q ss_pred             hcCCCCcccc
Q psy4949         164 MSEPGPACLI  173 (275)
Q Consensus       164 ~~d~~Pq~lv  173 (275)
                      .++  |..+.
T Consensus       174 ~~~--p~i~~  181 (190)
T d1fpwa_         174 KVD--PSIIG  181 (190)
T ss_dssp             HSS--TTHHH
T ss_pred             HHC--HHHHH
Confidence            887  55443

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.71  E-value=9.8e-18  Score=141.70  Aligned_cols=146  Identities=18%  Similarity=0.298  Sum_probs=117.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMC   90 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc   90 (275)
                      .+.++..|    |..||..|.+.+|+ |.|+.+++..++            +..+|+.||.+++|.|++.||..+++.++
T Consensus        19 ~t~f~~~e----i~~l~~~F~~~~~~-G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~   93 (201)
T d1omra_          19 NTKFTEEE----LSSWYQSFLKECPS-GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS   93 (201)
T ss_dssp             GCSSCHHH----HHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHH
T ss_pred             hCCCCHHH----HHHHHHHHHHHCcC-CCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhc
Confidence            34466667    77788888888997 788988876653            45799999999999999999999999999


Q ss_pred             CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhcc--CCCCCC-CchHHHhhhhcC-----CCcccHHHHHH
Q psy4949          91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVL--ESPSFS-YTDTLAQEIFSG-----NGKVTVNDFMD  161 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~g--E~~~f~-~~e~~v~~cF~~-----d~~Is~~eFl~  161 (275)
                      .+..++|++++|++| .|++|.|++.|+..+++.+..+.....  +.+... ..+..|+.+|..     ||.||.+||++
T Consensus        94 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~  173 (201)
T d1omra_          94 AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIE  173 (201)
T ss_dssp             SSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             ccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            999999999999999 799999999999999998877643222  111111 125678888885     68999999999


Q ss_pred             HHhcCCCCcccchh
Q psy4949         162 TMMSEPGPACLIWL  175 (275)
Q Consensus       162 ~~~~d~~Pq~lvWL  175 (275)
                      |++++  |..+-+|
T Consensus       174 ~~~~~--~~~~~~l  185 (201)
T d1omra_         174 GTLAN--KEILRLI  185 (201)
T ss_dssp             HHHHC--HHHHHHH
T ss_pred             HHHHC--HHHHHHh
Confidence            99987  6554443

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.3e-17  Score=138.05  Aligned_cols=137  Identities=18%  Similarity=0.329  Sum_probs=108.2

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHH------------HHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCC
Q psy4949          25 DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSG------------LLLNWLLSAYSVESLGRIRVFSIKVALATMCSG   92 (275)
Q Consensus        25 ~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~------------l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G   92 (275)
                      .++..|    |..||..|.+..|+ +.++.++...            .++..||+.||.+++|.|++.||+.+++.++++
T Consensus        18 ~fs~~E----i~~l~~~F~~~~~~-g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~   92 (187)
T d1g8ia_          18 YFTEKE----VQQWYKGFIKDCPS-GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG   92 (187)
T ss_dssp             SSCHHH----HHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHC
T ss_pred             CCCHHH----HHHHHHHHHHHCCC-CCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccC
Confidence            355666    67788888888777 5666555443            345679999999999999999999999999999


Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC-CCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS-FSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~-f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +.++|++++|++| .|++|.|+++||..+++.++.+.......+. -...++.++.+|..     ||.||.+||.+|+.+
T Consensus        93 ~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  172 (187)
T d1g8ia_          93 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  172 (187)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            9999999999999 7999999999999999988766432222211 12235778888864     689999999999998


Q ss_pred             C
Q psy4949         166 E  166 (275)
Q Consensus       166 d  166 (275)
                      +
T Consensus       173 ~  173 (187)
T d1g8ia_         173 D  173 (187)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=3.9e-17  Score=135.22  Aligned_cols=148  Identities=16%  Similarity=0.322  Sum_probs=115.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC
Q psy4949          24 SDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCS   91 (275)
Q Consensus        24 ~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~   91 (275)
                      +..+..|    |..||+.|.+.+|+ |.++.+++..++            ++.+|+.||.+++|.|++.||..+++.++.
T Consensus         8 t~ft~~e----i~~l~~~F~~~~~~-G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~   82 (178)
T d1s6ca_           8 TNFTKRE----LQVLYRGFKNECPS-GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR   82 (178)
T ss_dssp             SSCCHHH----HHHHHHHHHHHCTT-SEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH
T ss_pred             CCCCHHH----HHHHHHHHHHHCcC-CCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhc
Confidence            3456667    77778888888887 678877765543            567999999999999999999999999999


Q ss_pred             CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCC-CCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          92 GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLES-PSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        92 G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~-~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +...+|++++|+.| .|++|.|++.++..++..+..+....... ..-...++.++.+|..     ||.||.+||.+|+.
T Consensus        83 ~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~  162 (178)
T d1s6ca_          83 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ  162 (178)
T ss_dssp             CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             cchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            99999999999999 79999999999999999887775433222 1122236788888874     79999999999998


Q ss_pred             cCCCCcccchhhhh
Q psy4949         165 SEPGPACLIWLPLL  178 (275)
Q Consensus       165 ~d~~Pq~lvWL~~~  178 (275)
                      ++  |..+.+|.+.
T Consensus       163 ~~--~~~~~~l~~~  174 (178)
T d1s6ca_         163 ED--DNIMRSLQLF  174 (178)
T ss_dssp             SC--CHHHHHHHHH
T ss_pred             HC--HHHHHHhhhh
Confidence            76  6666666543

>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: Zinc finger ZZ-type-containing protein 3, ZZZ3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.6e-17  Score=118.27  Aligned_cols=57  Identities=23%  Similarity=0.554  Sum_probs=52.3

Q ss_pred             ccCCCCc-CcccCcCCCCccccceeeeccCC---CCccchhhhhCCcccCCCCCCCceeee
Q psy4949         183 AVESTSH-PIACDACGRANFVGFRYRCAKCG---NFQMCQECFWWGRVSGGHNLEHEVKEN  239 (275)
Q Consensus       183 ~~~~~~h-~~~Cd~C~~~pI~G~RykC~~C~---~~dLC~~C~~~g~~~~~H~~~H~m~e~  239 (275)
                      ....|.| ++.||+|...||.|.||+|+.|+   |||||+.||+.+..+..|+..|+|+.+
T Consensus         6 ~~~~v~H~~~~Cd~C~~~pi~G~R~~C~~Cp~~~d~DLC~~C~~~~~~~~~H~~~H~~~~I   66 (69)
T d2fc7a1           6 ESGFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPI   66 (69)
T ss_dssp             STTSCEESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSCCSSSCEEEE
T ss_pred             cCCCceECCeEcCCCCCcCcCCcccCCCCCCCCCCccchHHhhcCcccCCCCCCCCCEEEe
Confidence            3456788 89999999999999999999994   999999999999999999999999876

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.5e-16  Score=131.84  Aligned_cols=142  Identities=14%  Similarity=0.159  Sum_probs=105.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCc---------cChHHH-------HHHHHHHHHHhhcCC-CCCeeehHHHHH
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQ---------VHVEVL-------SGLLLNWLLSAYSVE-SLGRIRVFSIKV   84 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~---------v~~~~~-------~~l~~~~lf~~fD~~-~~G~I~~~ef~~   84 (275)
                      ..+.++..|    +..||++|.+-+|++..         +..++.       .+-+...+|++||.+ ++|.|+|.||+.
T Consensus         7 ~~T~ft~~E----I~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~l~~~~~~~rif~~fd~~~~~g~I~f~EFv~   82 (180)
T d1xo5a_           7 DLTFLTKQE----ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLD   82 (180)
T ss_dssp             CCCCSCHHH----HHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHHHHTCTTHHHHHHHHCCSTTCCEECHHHHHH
T ss_pred             HhcCCCHHH----HHHHHHHHHHHCcCccccccccccceEcHHHHhcCcccccChHHHHHHHhccCCCCCCcCcHHHHHH
Confidence            456788888    78899999888776321         222222       112456799999987 699999999999


Q ss_pred             HHHHhc-CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHH
Q psy4949          85 ALATMC-SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVN  157 (275)
Q Consensus        85 aLs~Lc-~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~  157 (275)
                      +|+.++ +|+.++|++|+|++| .|++|.|+++||..+++.++....  ++..+-...++.++.+|..     ||.||.+
T Consensus        83 ~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~--~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~  160 (180)
T d1xo5a_          83 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE--DTRLSASEMKQLIDNILEESDIDRDGTINLS  160 (180)
T ss_dssp             HHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC--------CCCCTTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccc--cccccHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            999997 779999999999999 799999999999999987643321  1111112235677888864     6899999


Q ss_pred             HHHHHHhcCCCCcc
Q psy4949         158 DFMDTMMSEPGPAC  171 (275)
Q Consensus       158 eFl~~~~~d~~Pq~  171 (275)
                      ||.+++.++  |..
T Consensus       161 EF~~~~~~~--P~~  172 (180)
T d1xo5a_         161 EFQHVISRS--PDF  172 (180)
T ss_dssp             HHHHHHHHC--HHH
T ss_pred             HHHHHHHhC--HHH
Confidence            999999876  643

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=2.2e-15  Score=125.30  Aligned_cols=148  Identities=14%  Similarity=0.236  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhc-CC
Q psy4949          24 SDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL----------LLNWLLSAYSVESLGRIRVFSIKVALATMC-SG   92 (275)
Q Consensus        24 ~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G   92 (275)
                      +.++..|++. |..+|..+-+.....|.++.+++...          ++..+|+.||.+++|.|++.||+.+++.++ ++
T Consensus         9 t~Fs~~ei~~-L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~   87 (183)
T d2zfda1           9 TVFSVSEIEA-LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA   87 (183)
T ss_dssp             SSCCHHHHHH-HHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred             CCCCHHHHHH-HHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCHHHHHHHHHHccCCCCcCcHHHHHHHHHhhhccC
Confidence            3456667333 23344443333222356676665433          456899999999999999999999999998 67


Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +.++|++++|++| .|++|.|+++|+..++..++...   +....-...++.++.+|..     +|.|+.+||..|+..+
T Consensus        88 ~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~  164 (183)
T d2zfda1          88 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES---GMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH  164 (183)
T ss_dssp             CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred             cHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhh---hcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            9999999999999 79999999999999988765432   2111111125567788875     6899999999999876


Q ss_pred             CCCcccchhhh
Q psy4949         167 PGPACLIWLPL  177 (275)
Q Consensus       167 ~~Pq~lvWL~~  177 (275)
                        |..+.++.+
T Consensus       165 --p~~~~~~~l  173 (183)
T d2zfda1         165 --PSLLKNMTL  173 (183)
T ss_dssp             --GGGGGGGCC
T ss_pred             --HHHHHHcCc
Confidence              666655543

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.62  E-value=2e-15  Score=124.87  Aligned_cols=136  Identities=21%  Similarity=0.393  Sum_probs=107.7

Q ss_pred             CCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH------------HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCC
Q psy4949          26 VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL------------LLNWLLSAYSVESLGRIRVFSIKVALATMCSGK   93 (275)
Q Consensus        26 l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l------------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~   93 (275)
                      ++..+    |..||..|.+..|+ +.++..+..+.            ++..+|+.||++++|.|++.+|+.+++.++.+.
T Consensus        18 fs~~e----i~~l~~~F~~~~~~-g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~   92 (181)
T d1bjfa_          18 FTEHE----IQEWYKGFLRDCPS-GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK   92 (181)
T ss_dssp             CCHHH----HHHHHHHHHHHSTT-SEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred             CCHHH----HHHHHHHHHhhCCC-CCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhc
Confidence            45556    66678777777776 56666555433            467899999999999999999999999999999


Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCC-CCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESP-SFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~-~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      .++|++++|++| .|++|.|++.|+..+++.+..........+ .....+..++.+|..     ||.||.+||++|+.+.
T Consensus        93 ~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~  172 (181)
T d1bjfa_          93 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD  172 (181)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            999999999999 799999999999999998876643221111 112236678888864     7999999999999886

>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: Zinc finger ZZ-type-containing protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.3e-16  Score=114.45  Aligned_cols=66  Identities=27%  Similarity=0.510  Sum_probs=50.0

Q ss_pred             ccCCCCc-CcccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCCCChhhhh
Q psy4949         183 AVESTSH-PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTRY  249 (275)
Q Consensus       183 ~~~~~~h-~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~~~~~~~~  249 (275)
                      ..+..+| ++.||+|+..||.|.||+|+.|+|||||+.||..+.. ..|...+.+.+...|.++..++
T Consensus        16 ~~~~~~H~~v~Cd~C~~~~i~G~Ry~C~~C~dyDLC~~C~~~~~h-~~H~f~~~~~~~~~w~~~~~r~   82 (85)
T d2dipa1          16 KERLDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYCH-LSHTFTFREKRNQKWRSLEKRA   82 (85)
T ss_dssp             SSCCSSCCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTSG-GGSCEEECCSSSCCCEECCCCC
T ss_pred             ccccCccCCeECCCCCCCCcCcceEEcCCCCCccchHHHHCcCCC-CCCCcceecCCCCCcccccccc
Confidence            3445577 8999999999999999999999999999999964322 3344444445667787776654

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.3e-12  Score=100.23  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=61.4

Q ss_pred             CCCCHHHHHHH----------HHHHHHHHh-----hcCCCCCccChHHHH-------------HHHHHHHHHhhcCCCC-
Q psy4949          24 SDVSVARFETL----------LSSLYHNLN-----KRLPVSQQVHVEVLS-------------GLLLNWLLSAYSVESL-   74 (275)
Q Consensus        24 ~~l~~~~l~~~----------L~~lY~~~~-----k~~P~~~~v~~~~~~-------------~l~~~~lf~~fD~~~~-   74 (275)
                      ..|+..+++.+          |..||+.|.     +.||+ +.++.+++.             +.++..||++||.|++ 
T Consensus         6 s~l~p~~l~~L~~~T~fs~~ei~~l~~~Fk~~~~~~~~p~-g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~   84 (118)
T d1tuza_           6 GLISPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCL   84 (118)
T ss_dssp             SCSCHHHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCT
T ss_pred             CCCCHHHHHHHHHHcCCCHHHHHHHHHHHhccccccCCcc-cccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHcccccc
Confidence            34566666554          677999994     55787 567766654             3466779999999976 


Q ss_pred             -------CeeehHHHHHHHHHhcCCChhhHHHHh
Q psy4949          75 -------GRIRVFSIKVALATMCSGKLMDKLRYI  101 (275)
Q Consensus        75 -------G~I~~~ef~~aLs~Lc~G~l~dKlr~~  101 (275)
                             |.|+|.||++|||+|++|+++|||+|+
T Consensus        85 ~~~~~~~g~I~f~efv~~LS~l~~G~~eeKL~~a  118 (118)
T d1tuza_          85 NETNVTKDVVCLNDVSCYFSLLEGGRPEDKLEWS  118 (118)
T ss_dssp             TCCCCCSCCEEHHHHHHHHHHHHSCCCSCCCCCC
T ss_pred             ccccCCCceeeHHHHHHHHHHHcCCCHHHhhccC
Confidence                   999999999999999999999999995

>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: ZZ domain
domain: CREB-binding protein, CBP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=3.7e-12  Score=85.78  Aligned_cols=44  Identities=20%  Similarity=0.662  Sum_probs=36.7

Q ss_pred             cccCcCCCCccccceeeeccCCCCccchhhhhCCcccCCCCCCCceeeecCC
Q psy4949         191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV  242 (275)
Q Consensus       191 ~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~~~~~H~~~H~m~e~~~~  242 (275)
                      ..||+|+. .| |.||+|..|+|||||+.||..+    .|  .|+|..+...
T Consensus         7 ~tCd~C~~-~i-~~Ry~C~~C~DfDLC~~C~~~~----~H--~H~m~k~~~~   50 (52)
T d1tota1           7 YTCNECKH-HV-ETRWHCTVCEDYDLCINCYNTK----SH--THKMVKWGLG   50 (52)
T ss_dssp             EEETTTTE-EE-SSEEEESSSSSCEECHHHHHHH----CC--CSSEEEECSS
T ss_pred             EECcCCCC-cC-CCceECCCCCCcccHHHHhcCC----Cc--CCCeEEecCC
Confidence            57999996 44 8999999999999999999643    45  5999988654

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.3e-10  Score=94.17  Aligned_cols=134  Identities=14%  Similarity=0.265  Sum_probs=96.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHH-------HHHHHHHhhcCCCCCeeehHHHHHHHHHhc-CCC
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL-------LLNWLLSAYSVESLGRIRVFSIKVALATMC-SGK   93 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l-------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-~G~   93 (275)
                      ..+.++..|+. -|..+|..+-++  ..|.|+.++...+       .+.-+|.+||.+++|.|++.+|+.+++... .+.
T Consensus         6 ~~t~ft~eei~-~l~~~F~~~D~d--~~G~I~~~E~~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~   82 (165)
T d1auib_           6 MCSHFDADEIK-RLGKRFKKLDLD--NSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD   82 (165)
T ss_dssp             CCCSCCHHHHH-HHHHHHHHHCTT--CCSEECHHHHTTSHHHHTCTTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCC
T ss_pred             HcCCCCHHHHH-HHHHHHHHHCCC--CCCCCcHHHHHHhhhccCCHHHHHHHHHHccccchhhhhhhhhhhccccccchh
Confidence            34567777744 234555554433  2356776664332       245689999999999999999999999876 667


Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++++.+|+.+ .|++|.|+..+|..+++...      ++.......+..++..|..     ||.||.+||+..+.
T Consensus        83 ~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~------~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~  153 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV------GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG  153 (165)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHH------TTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHG
T ss_pred             hHHHHHHHHHHhcccccccccHHHHHHHHHHhc------cccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHh
Confidence            889999999999 79999999999998887532      2211111125567777664     68999999999775

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.11  E-value=4e-10  Score=88.87  Aligned_cols=93  Identities=19%  Similarity=0.282  Sum_probs=74.4

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCC
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSY  139 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~  139 (275)
                      +.-+++.+|.+++|+|++.+|..++...... ...++++.+|+.+ .|++|.|++.+|..++..+       |.    ..
T Consensus        47 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------~~----~~  115 (146)
T d1exra_          47 LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-------GE----KL  115 (146)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-------TC----CC
T ss_pred             HHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------hh----cC
Confidence            3568899999999999999999998766655 4678999999999 7999999999998888753       21    12


Q ss_pred             chHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         140 TDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       140 ~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +++.++.+|..     +|.|+.+||++.+++
T Consensus       116 ~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~s  146 (146)
T d1exra_         116 TDDEVDEMIREADIDGDGHINYEEFVRMMVS  146 (146)
T ss_dssp             CHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCCCCeEeHHHHHHHhcC
Confidence            35556666653     689999999998763

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.7e-09  Score=88.67  Aligned_cols=117  Identities=13%  Similarity=0.208  Sum_probs=83.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHh
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYI  101 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~  101 (275)
                      .+..|+..||..+|..+...     |.....+.+.+     .-+++.||.+++|+|++.||+.....      .++++.+
T Consensus        12 ~dG~I~~~EL~~~L~~~g~~-----~~~~~~s~~~~-----~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~~   75 (165)
T d1k94a_          12 QDGEVDAEELQRCLTQSGIN-----GTYSPFSLETC-----RIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKEN   75 (165)
T ss_dssp             GGTSBCHHHHHHHHHHHTTT-----TTSCCCCHHHH-----HHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCC-----CCcccCCHHHH-----HHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHHH
Confidence            36789999987777765422     12123344444     45678899999999999999987764      4788999


Q ss_pred             chhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhh---hcCCCcccHHHHHHHHhc
Q psy4949         102 FSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI---FSGNGKVTVNDFMDTMMS  165 (275)
Q Consensus       102 F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~c---F~~d~~Is~~eFl~~~~~  165 (275)
                      |+.+ .|++|.|+.+||...|+.+       |.    .-+++.++.+   |..+|.|+.+||+..+..
T Consensus        76 F~~fD~d~sG~I~~~El~~~l~~~-------G~----~l~~~~~~~l~~~~d~~g~i~~~eFi~~~~~  132 (165)
T d1k94a_          76 FMTVDQDGSGTVEHHELRQAIGLM-------GY----RLSPQTLTTIVKRYSKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHCTTCCSBCCHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHCBTTBCBHHHHHHHHHH
T ss_pred             HHHhCCCCCCeEcHHHHHHHHHHh-------hh----cCCHHHHHHHHHHcCCCCcCcHHHHHHHHHH
Confidence            9999 6999999999998888753       21    1122223222   466899999999987643

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.88  E-value=1.2e-09  Score=84.28  Aligned_cols=111  Identities=16%  Similarity=0.292  Sum_probs=79.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCCh---hhHHH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL---MDKLR   99 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l---~dKlr   99 (275)
                      +..|+..++..++..+-       +.    ..++    -++.+|+.+|.+++|+|++.||+..++.......   ...++
T Consensus        14 dG~is~~E~~~~l~~~~-------~~----~~~~----~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~   78 (134)
T d1jfja_          14 DGAVSYEEVKAFVSKKR-------AI----KNEQ----LLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLK   78 (134)
T ss_dssp             SSEEEHHHHHHHHHTTC-------CS----SHHH----HHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHcC-------CC----CCHH----HHHHHHHHhhhccccccccccccccccccccccccccccccc
Confidence            56789999665554331       11    1122    2567899999999999999999998876665544   35578


Q ss_pred             Hhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHH
Q psy4949         100 YIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTM  163 (275)
Q Consensus       100 ~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~  163 (275)
                      .+|+.| .|++|.|+.+++..+++..             +.  +.+...|.     ++|.||.+||++.+
T Consensus        79 ~~F~~~D~~~~g~i~~~el~~~~~~~-------------~~--~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          79 VLYKLMDVDGDGKLTKEEVTSFFKKH-------------GI--EKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHCCSSSSEEEHHHHHHHHTTT-------------TC--HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ccccccccccCCcccHHHHHHHHHhc-------------Cc--HHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            999999 7999999999998776521             11  22333333     26899999999976

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.80  E-value=2.4e-08  Score=79.45  Aligned_cols=120  Identities=16%  Similarity=0.182  Sum_probs=84.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCC--ChhhHHHH
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSG--KLMDKLRY  100 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G--~l~dKlr~  100 (275)
                      +..|+..++..+|+.+    -. .|+     .++..     -+ ...|.+++|.|++.+|+..++-+...  ...+.++.
T Consensus        23 dG~I~~~el~~~l~~l----G~-~~t-----~~e~~-----~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~   86 (152)
T d1wdcc_          23 DGAVDAFKLGDVCRCL----GI-NPR-----NEDVF-----AV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYME   86 (152)
T ss_dssp             SSCEEGGGHHHHHHHT----TC-CCC-----HHHHH-----HT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHH
T ss_pred             CCeECHHHHHHHHHHh----cc-Ccc-----Hhhhh-----hh-hhhhccccccccccccccccccccccchhHHHhhhh
Confidence            4578888866666543    11 132     22221     12 23588889999999999998876543  45677999


Q ss_pred             hchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----C--CCcccHHHHHHHHhcCCCC
Q psy4949         101 IFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----G--NGKVTVNDFMDTMMSEPGP  169 (275)
Q Consensus       101 ~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~--d~~Is~~eFl~~~~~d~~P  169 (275)
                      +|+.| .|++|.|+..+|..+|+.+       |.    .-++..++.++.     .  +|.|+.+||+..+++.|.|
T Consensus        87 aF~~~D~~~~G~I~~~el~~~l~~~-------g~----~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p~p  152 (152)
T d1wdcc_          87 AFKTFDREGQGFISGAELRHVLTAL-------GE----RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP  152 (152)
T ss_dssp             HHHTTCSSSSSEEEHHHHHHHHHHS-------SS----CCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCSCC
T ss_pred             hhhccccccCccchHHHHHHHHHHc-------CC----CCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCCCC
Confidence            99999 7999999999999888752       32    223444554443     2  3789999999999998766

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.77  E-value=1.4e-09  Score=90.94  Aligned_cols=90  Identities=8%  Similarity=0.197  Sum_probs=63.7

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      ++.+++.+|.|++|+|++.||+..+..+      ++++.+|+.| .|++|.|+..|+...|+.+       |...+..-.
T Consensus        65 ~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~-------g~~~~~~~~  131 (188)
T d1qxpa2          65 CRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA-------GFKLPCQLH  131 (188)
T ss_dssp             HHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT-------TEECCHHHH
T ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHh-------hhcCCHHHH
Confidence            4678899999999999999999877544      6889999999 6999999999998887753       221110000


Q ss_pred             hHHHhhhhcCCCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFSGNGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~~d~~Is~~eFl~~~~  164 (275)
                      +..+...-.++|.|+.+||+..+.
T Consensus       132 ~~l~~~~~~~dg~i~f~eFi~~~~  155 (188)
T d1qxpa2         132 QVIVARFADDELIIDFDNFVRCLV  155 (188)
T ss_dssp             HHHHHHTSCSSSBCCHHHHHHHHH
T ss_pred             HHHHHHhcCCCCcCCHHHHHHHHH
Confidence            222333222378999999999664

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.77  E-value=8.4e-08  Score=75.39  Aligned_cols=91  Identities=16%  Similarity=0.271  Sum_probs=72.2

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCC-hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGK-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      ..++..++.++.+.+++.+|...+....... ..++++-+|+.| .|++|.|+..||..+|..+       |..    -+
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~  117 (146)
T d1lkja_          49 NDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-------GEK----LT  117 (146)
T ss_dssp             HHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHH-------TCS----CC
T ss_pred             HHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------CCc----cc
Confidence            4577889999999999999999998877664 578899999999 7999999999999888754       221    13


Q ss_pred             hHHHhhhhc----CCCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFS----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~----~d~~Is~~eFl~~~~  164 (275)
                      +..++.+|.    ++|+|+.+||+.++.
T Consensus       118 ~~~~~~~~~~~dd~dG~I~~~eF~~~m~  145 (146)
T d1lkja_         118 DAEVDDMLREVSDGSGEINIQQFAALLS  145 (146)
T ss_dssp             HHHHHHHHHHHCCSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHhccCCCCeEeHHHHHHHhC
Confidence            344444444    478999999999873

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=98.77  E-value=1.1e-08  Score=78.48  Aligned_cols=89  Identities=18%  Similarity=0.265  Sum_probs=66.7

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT  142 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~  142 (275)
                      -++..||.  +|.|+|.+|...++  ..++.++.++.+|+.| .|++|+|++.||..+|+.+    ...|+.    .+++
T Consensus        13 ~~~~~~~~--~G~idf~eF~~~~~--~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l----~~~g~~----~~~~   80 (109)
T d5pala_          13 KAISAFKD--PGTFDYKRFFHLVG--LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF----SAHGRD----LNDT   80 (109)
T ss_dssp             HHHHHTCS--TTCCCHHHHHHHHT--CTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH----CTTCCC----CCHH
T ss_pred             HHHHhcCC--CCcCcHHHHHHHHH--hcCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHh----hhccCc----CCHH
Confidence            45566664  58899999986554  4678889999999999 6999999999999888764    122332    1345


Q ss_pred             HHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         143 LAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       143 ~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .++.+|..     +|.|+.+||+..+.
T Consensus        81 e~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d5pala_          81 ETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            56666543     79999999999764

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.1e-08  Score=80.53  Aligned_cols=115  Identities=16%  Similarity=0.227  Sum_probs=80.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..|+..||..+|..+...     |+....+.+.     +..+++.+|.|++|+|++.||+..+..      .+.++-+|
T Consensus        20 dG~Is~~EL~~~L~~~g~~-----~~~~~~~~~~-----v~~l~~~~D~d~~G~I~f~EF~~~~~~------~~~~~~~f   83 (172)
T d1juoa_          20 DGQIDADELQRCLTQSGIA-----GGYKPFNLET-----CRLMVSMLDRDMSGTMGFNEFKELWAV------LNGWRQHF   83 (172)
T ss_dssp             TTEECHHHHHHHHHHHTTT-----CSSCCCCHHH-----HHHHHHHHCTTCSSCEEHHHHHHHHHH------HHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCC-----CCcccCCHHH-----HHHHHHHHCCCCCCceehHHHHHHHHh------hhhhhHHH
Confidence            5679999988877776422     2222334333     356788999999999999999987764      35678899


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhh---hcCCCcccHHHHHHHHh
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI---FSGNGKVTVNDFMDTMM  164 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~c---F~~d~~Is~~eFl~~~~  164 (275)
                      +.+ .|++|.|+.+|+..+|+.+       +.    .-+++.++..   |..+|.|+.++|+..+.
T Consensus        84 ~~~D~d~sG~i~~~El~~~l~~~-------g~----~ls~~~~~~l~~~~d~~g~i~~~eF~~~~~  138 (172)
T d1juoa_          84 ISFDTDRSGTVDPQELQKALTTM-------GF----RLSPQAVNSIAKRYSTNGKITFDDYIACCV  138 (172)
T ss_dssp             HTTCTTCCSEECHHHHHHHHHHT-------TC----CCCHHHHHHHHHHTCSSSSEEHHHHHHHHH
T ss_pred             HHhCcCCCCcCCHHHHHHHHHHH-------HH----hhhHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence            999 6999999999998887652       21    1123333333   34578888888888664

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.8e-07  Score=76.24  Aligned_cols=136  Identities=14%  Similarity=0.211  Sum_probs=98.3

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHH-----HHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLN-----WLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~-----~lf~~fD~~~~G~I   77 (275)
                      ||...+.++++..|.+..  ...++...+.    .|...+-+.  ..+.++.+++..++..     .+|+.||++++|+|
T Consensus        16 I~~~EL~~~L~~~g~~~~--~~~~s~~~~~----~li~~~D~~--~~G~i~~~EF~~l~~~~~~~~~~F~~fD~d~sG~I   87 (165)
T d1k94a_          16 VDAEELQRCLTQSGINGT--YSPFSLETCR----IMIAMLDRD--HTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTV   87 (165)
T ss_dssp             BCHHHHHHHHHHHTTTTT--SCCCCHHHHH----HHHHHHCTT--CSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSBC
T ss_pred             CCHHHHHHHHHHcCCCCC--cccCCHHHHH----HHHHHhCCC--CCCcCcHHHHHHHhhccchhHHHHHHhCCCCCCeE
Confidence            667778889999998764  4457776643    343334222  3478999998877443     48999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CC
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NG  152 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~  152 (275)
                      +..|++.||.-+.----.+-+..+++.| |.||.|+..++..++..+                 +.+...|..     +|
T Consensus        88 ~~~El~~~l~~~G~~l~~~~~~~l~~~~-d~~g~i~~~eFi~~~~~l-----------------~~~~~~F~~~D~d~~G  149 (165)
T d1k94a_          88 EHHELRQAIGLMGYRLSPQTLTTIVKRY-SKNGRIFFDDYVACCVKL-----------------RALTDFFRKRDHLQQG  149 (165)
T ss_dssp             CHHHHHHHHHHTTCCCCHHHHHHHHHHH-CBTTBCBHHHHHHHHHHH-----------------HHHHHHHHTTCTTCCS
T ss_pred             cHHHHHHHHHHhhhcCCHHHHHHHHHHc-CCCCcCcHHHHHHHHHHH-----------------HHHHHHHHHhCCCCCC
Confidence            9999999999876544566678888887 789999999987655432                 123334543     46


Q ss_pred             cc--cHHHHHHHHh
Q psy4949         153 KV--TVNDFMDTMM  164 (275)
Q Consensus       153 ~I--s~~eFl~~~~  164 (275)
                      .|  +.+||+..++
T Consensus       150 ~i~l~~~ef~~~~~  163 (165)
T d1k94a_         150 SANFIYDDFLQGTM  163 (165)
T ss_dssp             EEEEEHHHHHHHHH
T ss_pred             cEEecHHHHHHHHH
Confidence            66  5799998765

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=1.1e-07  Score=78.08  Aligned_cols=127  Identities=13%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      |-..+.++|+...-+   .+..|+..|+..+|+.+.        . ...+.+     .+..+++.||.+++|+|++.||.
T Consensus        17 ~~~~L~~iF~~~D~d---~~G~Is~~E~~~~l~~~~--------~-~~~~~~-----~~~~l~~~~D~d~~g~i~~~EFl   79 (181)
T d1hqva_          17 DQSFLWNVFQRVDKD---RSGVISDNELQQALSNGT--------W-TPFNPV-----TVRSIISMFDRENKAGVNFSEFT   79 (181)
T ss_dssp             CHHHHHHHHHHHCTT---CCSSBCHHHHHHHCCCSS--------S-SCCCHH-----HHHHHHHHHCCSSSSSBCHHHHH
T ss_pred             cHHHHHHHHHHHcCC---CCCcCcHHHHHHHHHHcC--------C-CcccHH-----HHHHHhhccccccccchhhhHHH
Confidence            444556666665433   245677777443331110        0 011221     35678899999999999999998


Q ss_pred             HHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHH
Q psy4949          84 VALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVN  157 (275)
Q Consensus        84 ~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~  157 (275)
                      ..+..      ..+++.+|+.| .|++|.|++.+|..+++..       +.    ..+++.++.++.     ++|.|+.+
T Consensus        80 ~~~~~------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~-------~~----~l~~e~~~~~~~~~d~~~dg~Is~~  142 (181)
T d1hqva_          80 GVWKY------ITDWQNVFRTYDRDNSGMIDKNELKQALSGF-------GY----RLSDQFHDILIRKFDRQGRGQIAFD  142 (181)
T ss_dssp             HHHHH------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHH-------TB----CCCHHHHHHHHHHHCSSCSSCBCHH
T ss_pred             hhhhh------ccccccccccccccccchhhhHHHHHHHHHc-------CC----cchhHHHHHHHHHhCCCCCCcCcHH
Confidence            87754      36789999999 6899999999998888753       21    113444444433     36899999


Q ss_pred             HHHHHHh
Q psy4949         158 DFMDTMM  164 (275)
Q Consensus       158 eFl~~~~  164 (275)
                      ||+..+.
T Consensus       143 eF~~~~~  149 (181)
T d1hqva_         143 DFIQGCI  149 (181)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998663

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.72  E-value=1.6e-08  Score=80.44  Aligned_cols=91  Identities=18%  Similarity=0.302  Sum_probs=65.4

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHH----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCC
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALAT----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF  137 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f  137 (275)
                      .-++..+|.+++|.|+..++......    ...+..+++++.+|++| .|++|.|+..+|..++.       .+|+.   
T Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~-------~~~~~---  123 (156)
T d1dtla_          54 QEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ-------ATGET---  123 (156)
T ss_dssp             HHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGT-------TC--C---
T ss_pred             HHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHh-------hcCCC---
Confidence            35678899999999999888765443    34578899999999999 79999999999865443       33332   


Q ss_pred             CCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949         138 SYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       138 ~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                       -++..++.+|.     ++|.|+.+||+++++
T Consensus       124 -ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~  154 (156)
T d1dtla_         124 -ITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  154 (156)
T ss_dssp             -CCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence             23445555544     369999999999764

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.71  E-value=2.4e-08  Score=82.35  Aligned_cols=122  Identities=11%  Similarity=0.249  Sum_probs=81.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhc
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF  102 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F  102 (275)
                      +..|++.||..+|..+......  +....++.+.     +.-+++.+|.+++|+|++.||+.....+      ++++.+|
T Consensus        31 dG~Is~~EL~~~L~~~~~~~~~--~~~~~~s~~~-----~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F   97 (186)
T d1df0a1          31 DAEISAFELQTILRRVLAKRED--IKSDGFSIET-----CKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIY   97 (186)
T ss_dssp             GTCEEHHHHHHHHHHHHHC------CCCCCCHHH-----HHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHH
T ss_pred             CCeEcHHHHHHHHHHhcccccc--cccccCCHHH-----HHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHH
Confidence            4568888877777766544221  1111233333     3567899999999999999999887654      6799999


Q ss_pred             hhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-CCCcccHHHHHHHHhc
Q psy4949         103 SQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-GNGKVTVNDFMDTMMS  165 (275)
Q Consensus       103 ~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-~d~~Is~~eFl~~~~~  165 (275)
                      +.+ .|++|.|+..|+...|+.+       |...+ ..........+. ++|.|+.+||+..+..
T Consensus        98 ~~~D~d~sG~I~~~El~~~l~~~-------g~~~~-~~~~~~~~~~d~d~dg~I~f~eFi~~~~~  154 (186)
T d1df0a1          98 REIDVDRSGTMNSYEMRKALEEA-------GFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVR  154 (186)
T ss_dssp             HHHCTTCCSCEEGGGHHHHHHHT-------TEECC-HHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred             HhhCCCCCCcccHHHHHHHHHHH-------Hhccc-HHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence            999 6999999999999888753       21110 000122223333 3789999999997643

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.70  E-value=6.9e-09  Score=79.57  Aligned_cols=83  Identities=16%  Similarity=0.281  Sum_probs=61.5

Q ss_pred             CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-
Q psy4949          72 ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-  149 (275)
Q Consensus        72 ~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-  149 (275)
                      +++|.|+|.||...++  ..++..+++|.+|+.| .|++|+|++.||..+|+.+    ...|+    ..+++.++.+|. 
T Consensus        19 d~dG~idf~EF~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l----~~~g~----~ls~~ev~~~~~~   88 (109)
T d1pvaa_          19 KAEGSFNHKKFFALVG--LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSF----AADGR----DLTDAETKAFLKA   88 (109)
T ss_dssp             CSTTCCCHHHHHHHHT--CTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT----CTTCC----CCCHHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHHH--HccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHh----hhcCC----CCCHHHHHHHHHH
Confidence            5678999999987654  3577789999999999 7999999999987666532    11122    123455555554 


Q ss_pred             ----CCCcccHHHHHHHHh
Q psy4949         150 ----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       150 ----~d~~Is~~eFl~~~~  164 (275)
                          +||.|+.+||+..+.
T Consensus        89 ~D~d~dG~I~~~EF~~~m~  107 (109)
T d1pvaa_          89 ADKDGDGKIGIDEFETLVH  107 (109)
T ss_dssp             HCTTCSSSBCHHHHHHHHH
T ss_pred             HCCCCcCcEeHHHHHHHHH
Confidence                379999999999764

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.70  E-value=7.3e-09  Score=79.68  Aligned_cols=96  Identities=17%  Similarity=0.221  Sum_probs=75.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      +.-||+.||.|++|.|++.||..++..+.....+++.+.+|+.+ .|+||.|+..|+..++..+   .   .+  .....
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~---~---~~--~~~~~   73 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI---Q---GQ--DLSDD   73 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCS---S---CC--SSHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccc---c---cc--ccccc
Confidence            56799999999999999999999999999889999999999999 7999999999997655321   0   10  11112


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +..++.+|..     +|.||.+||...+..
T Consensus        74 ~~~~~~~F~~~D~~~~g~i~~~el~~~~~~  103 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKK  103 (134)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTT
T ss_pred             cccccccccccccccCCcccHHHHHHHHHh
Confidence            4456666653     689999999998753

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.70  E-value=3.7e-08  Score=79.57  Aligned_cols=141  Identities=9%  Similarity=0.098  Sum_probs=93.3

Q ss_pred             HHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           8 VIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         8 ~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      +.++|+.. ..+   .+..|+..|+..++..+..........................++...|.+++|.|++.+|+.++
T Consensus        10 i~~~F~~~~D~d---~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~   86 (185)
T d2sasa_          10 IKFTFDFFLDMN---HDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW   86 (185)
T ss_dssp             HHHHHHHHTCTT---CSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHhhcCC---CCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence            44566552 433   36679999998888877654332210000011222333344567899999999999999999988


Q ss_pred             HHhcC---------CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          87 ATMCS---------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        87 s~Lc~---------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      .....         ......++.+|+.+ .|++|.||+.||..+++.             ++.+++.++.+|..     +
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~-------------~~l~~~~~~~~f~~~D~d~d  153 (185)
T d2sasa_          87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN-------------FQLQCADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS-------------SCCCCSSHHHHHHHHHTTTT
T ss_pred             HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHH-------------cCCCHHHHHHHHHHcCCCCC
Confidence            65542         22344578999999 799999999999877652             12233345555553     6


Q ss_pred             CcccHHHHHHHHh
Q psy4949         152 GKVTVNDFMDTMM  164 (275)
Q Consensus       152 ~~Is~~eFl~~~~  164 (275)
                      |.|+.+||++++.
T Consensus       154 G~i~~~EF~~~~~  166 (185)
T d2sasa_         154 VTFDLNRYKELYY  166 (185)
T ss_dssp             SCCSHHHHHHHHH
T ss_pred             CCCcHHHHHHHHH
Confidence            8999999997663

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.5e-09  Score=85.22  Aligned_cols=103  Identities=7%  Similarity=0.033  Sum_probs=67.7

Q ss_pred             HHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCC---
Q psy4949          61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPS---  136 (275)
Q Consensus        61 ~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~---  136 (275)
                      .++.++...|.+++|.|+|.+|...+..++.   ..++..+|..| .|++|.||.++|..+|+....-|. +.|...   
T Consensus        46 ~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~-~~e~~~~~~  121 (170)
T d2zkmx1          46 ACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSR-LNSLLFPPA  121 (170)
T ss_dssp             HTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CHHHHTTCC--------CCCHHHHHHHHHHTCC-------------
T ss_pred             HHhhhhccccccCCCccCHHHHHHHHhccCC---HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchh-hhhhccccC
Confidence            3556789999999999999999999999875   46789999999 688999999999999998655543 222211   


Q ss_pred             -CCCchHHHhhhhcC-----CCcccHHHHHHHHhcCC
Q psy4949         137 -FSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSEP  167 (275)
Q Consensus       137 -f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d~  167 (275)
                       .....+.++.+.+.     +|.||+++|+.+++++.
T Consensus       122 ~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~e  158 (170)
T d2zkmx1         122 RPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPE  158 (170)
T ss_dssp             ---CHHHHHHHHCCC--------CCHHHHHHHHHSTT
T ss_pred             CHHHHHHHHHHHccccccccCCeECHHHHHHHHcCcc
Confidence             11123455555443     47899999999999865

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.66  E-value=1.9e-07  Score=73.18  Aligned_cols=133  Identities=16%  Similarity=0.186  Sum_probs=89.1

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+....+   .+..|+..|+..+|+.+=    .. |+     .++...++..   ...|.+++|.|++.+|...
T Consensus         4 eelke~F~~~D~d---~~G~I~~~el~~~l~~lg----~~-~~-----~~e~~~~~~~---~~~d~~~~g~i~~~eF~~~   67 (145)
T d2mysc_           4 DDFKEAFLLFDRT---GDAKITASQVGDIARALG----QN-PT-----NAEINKILGN---PSKEEMNAAAITFEEFLPM   67 (145)
T ss_pred             HHHHHHHHHHcCC---CCCeECHHHHHHHHHHhh----hc-ch-----hhhhHHHHHH---HhhcccccCccchhHHHHH
Confidence            3455677776644   467899999777776552    11 22     1222222221   1235567899999999998


Q ss_pred             HHHhcCCC---hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc----CCCcccHH
Q psy4949          86 LATMCSGK---LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS----GNGKVTVN  157 (275)
Q Consensus        86 Ls~Lc~G~---l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~----~d~~Is~~  157 (275)
                      +......+   ..+.++.+|+.+ .|++|.|+..+|..+|+.+       |+..    ++..++.++.    ++|.|+.+
T Consensus        68 ~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-------g~~~----~~~e~~~l~~~~~d~dG~I~y~  136 (145)
T d2mysc_          68 LQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-------GEKM----TEEEVEELMKGQEDSNGCINYE  136 (145)
T ss_pred             HhhhhhccccchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHh-------CCCC----CHHHHHHHHhhcCCCCCeEEHH
Confidence            87766543   455688999999 6999999999999888753       3321    3334444443    36899999


Q ss_pred             HHHHHHhc
Q psy4949         158 DFMDTMMS  165 (275)
Q Consensus       158 eFl~~~~~  165 (275)
                      ||++.+++
T Consensus       137 eF~~~ll~  144 (145)
T d2mysc_         137 AFVKHIMS  144 (145)
T ss_pred             HHHHHHhc
Confidence            99998864

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.65  E-value=9e-08  Score=77.66  Aligned_cols=131  Identities=11%  Similarity=0.235  Sum_probs=88.6

Q ss_pred             HHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           7 NVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         7 ~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      ..=++|++.- +  + +..|+..||..+|..+-........  ..++.+.+     .-+++.+|.+++|.|++.+|+...
T Consensus         5 ~~r~~F~~~d-~--~-dg~I~~~EL~~~L~~~~~~~~~~~~--~~~~~~~~-----~~l~~~~d~d~~g~i~~~ef~~~~   73 (173)
T d1alva_           5 QFRRLFAQLA-G--D-DMEVSATELMNILNKVVTRHPDLKT--DGFGIDTC-----RSMVAVMDSDTTGKLGFEEFKYLW   73 (173)
T ss_dssp             HHHHHHHHHH-G--G-GTSBCHHHHHHHHHHHHHTCSTTCC--SCCCHHHH-----HHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHc-C--C-CCcCCHHHHHHHHHHhCCCcchhhh--ccCCHHHH-----HHHHHHhccCCCCcccchhhhhhh
Confidence            3446676664 2  2 4679999988888776654221111  11233333     457799999999999999998887


Q ss_pred             HHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHh---hhhc-CCCcccHHHHHH
Q psy4949          87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ---EIFS-GNGKVTVNDFMD  161 (275)
Q Consensus        87 s~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~---~cF~-~d~~Is~~eFl~  161 (275)
                      ..      .+.++.+|+.+ .|++|.|+..++...|+.+       |+.    .++..++   ..+. ++|.|+.+||+.
T Consensus        74 ~~------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~-------g~~----~~~~~~~~~~~~d~d~~G~i~~~EF~~  136 (173)
T d1alva_          74 NN------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAA-------GFH----LNEHLYSMIIRRYSDEGGNMDFDNFIS  136 (173)
T ss_dssp             HH------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-------TCC----CCHHHHHHHHHHHTCSSSCBCHHHHHH
T ss_pred             hh------hhHHHHHHHHhccCCCCeecHHHHHHHHHHH-------HHh----hHHHHHHHhhccccCCCCeEeHHHHHH
Confidence            64      36788899999 6899999999998888764       221    1222222   2222 478999999999


Q ss_pred             HHhc
Q psy4949         162 TMMS  165 (275)
Q Consensus       162 ~~~~  165 (275)
                      .+..
T Consensus       137 ~~~~  140 (173)
T d1alva_         137 CLVR  140 (173)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.64  E-value=2.3e-08  Score=69.66  Aligned_cols=62  Identities=13%  Similarity=0.244  Sum_probs=57.0

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +.-+|+.||.+++|.|+..||+.++..+......+.++.+|+.+ .|++|.|+.+||..+++.
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            35689999999999999999999999999988899999999999 799999999999887764

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.62  E-value=1.1e-07  Score=75.80  Aligned_cols=130  Identities=17%  Similarity=0.256  Sum_probs=88.7

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+...-+   .+..|+..++..+|+    .+...      +. +..    ++-++..+|.+++|.|++.+|...
T Consensus        20 ~el~~~F~~~D~d---~~G~Is~~el~~~l~----~~~~~------~~-~~~----~~~~~~~~d~~~~~~~~~~e~~~~   81 (162)
T d1topa_          20 AEFKAAFDMFDAD---GGGDISTKELGTVMR----MLGQN------PT-KEE----LDAIIEEVDEDGSGTIDFEEFLVM   81 (162)
T ss_dssp             HHHHHHHHTTTCS---CSSEEEGGGHHHHHH----HTTCC------CC-HHH----HHHHHHHHCTTSCCEEEHHHHHHH
T ss_pred             HHHHHHHHHHcCC---CCCeEcHHHHHHHHh----ccCCc------hh-HHH----HHhhhheeccCCCCCeeeehhhhh
Confidence            3455677666544   356677778544333    32211      11 122    345788999999999999999877


Q ss_pred             HHHhc----CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCccc
Q psy4949          86 LATMC----SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVT  155 (275)
Q Consensus        86 Ls~Lc----~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is  155 (275)
                      +....    .+...+.++.+|+.+ .|++|.|++.++..+|...       +.    ..++..++.+|..     +|.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~-------~~----~~~~~~~~~l~~~~D~d~dG~Is  150 (162)
T d1topa_          82 MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-------GE----HVTEEDIEDLMKDSDKNNDGRID  150 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-------TC----CCCHHHHHHHHHHHCTTCSSSBC
T ss_pred             hhhhhhhhcccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh-------CC----CCCHHHHHHHHHHhCCCCCCcEE
Confidence            76543    445677788999999 7999999999998776531       21    1235566666653     69999


Q ss_pred             HHHHHHHHh
Q psy4949         156 VNDFMDTMM  164 (275)
Q Consensus       156 ~~eFl~~~~  164 (275)
                      .+||+.++.
T Consensus       151 ~~EF~~~l~  159 (162)
T d1topa_         151 FDEFLKMME  159 (162)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999874

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=6.6e-07  Score=72.36  Aligned_cols=137  Identities=15%  Similarity=0.207  Sum_probs=99.0

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~I   77 (275)
                      |+...+-.++++.|++..  ...++...    ++.++..+-+..  .|.|+.+++..++.     .-.|+.||.+++|.|
T Consensus        23 Is~~EL~~~L~~~g~~~~--~~~~~~~~----v~~l~~~~D~d~--~G~I~f~EF~~~~~~~~~~~~~f~~~D~d~sG~i   94 (172)
T d1juoa_          23 IDADELQRCLTQSGIAGG--YKPFNLET----CRLMVSMLDRDM--SGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV   94 (172)
T ss_dssp             ECHHHHHHHHHHHTTTCS--SCCCCHHH----HHHHHHHHCTTC--SSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCHHHHHHHHHHcCCCCC--cccCCHHH----HHHHHHHHCCCC--CCceehHHHHHHHHhhhhhhHHHHHhCcCCCCcC
Confidence            566667778899998863  44567666    566666665553  36788888776653     348999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CC
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NG  152 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~  152 (275)
                      +..|+..+|.-+...--.+-++.+|+.+ |.+|.|+.+++..++.-+-                 .+...|+.     +|
T Consensus        95 ~~~El~~~l~~~g~~ls~~~~~~l~~~~-d~~g~i~~~eF~~~~~~~~-----------------~~~~~f~~~D~d~~G  156 (172)
T d1juoa_          95 DPQELQKALTTMGFRLSPQAVNSIAKRY-STNGKITFDDYIACCVKLR-----------------ALTDSFRRRDTAQQG  156 (172)
T ss_dssp             CHHHHHHHHHHTTCCCCHHHHHHHHHHT-CSSSSEEHHHHHHHHHHHH-----------------HHHHHHHHTCTTCCS
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHH-HhcCCcCHHHHHHHHHHHH-----------------HHHHHHHHhCCCCCC
Confidence            9999999999876544455578899988 8899999999977665431                 23334443     57


Q ss_pred             ccc--HHHHHHHHhc
Q psy4949         153 KVT--VNDFMDTMMS  165 (275)
Q Consensus       153 ~Is--~~eFl~~~~~  165 (275)
                      .||  .+||+..+++
T Consensus       157 ~Itl~~~eFl~~~l~  171 (172)
T d1juoa_         157 VVNFPYDDFIQCVMS  171 (172)
T ss_dssp             EEEEEHHHHHHHHTT
T ss_pred             cEEecHHHHHHHHHc
Confidence            775  5899987653

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.58  E-value=4.8e-08  Score=74.50  Aligned_cols=89  Identities=13%  Similarity=0.215  Sum_probs=64.6

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT  142 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~  142 (275)
                      -++..|+  .+|+|++.+|...+.+  .++.+++++.+|++| .|++|.|++.||..+|+.+...    ++    ..++.
T Consensus        13 ~~~~~~~--~~~~i~f~eF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~----~~----~~~~~   80 (109)
T d1rwya_          13 KAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSD----AR----DLSAK   80 (109)
T ss_dssp             HHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTT----CC----CCCHH
T ss_pred             HHHHhcc--cCCCcCHHHHHHHHcc--ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccc----cc----cCCHH
Confidence            3445554  4578999999887763  456788999999999 6999999999999888764111    11    12344


Q ss_pred             HHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         143 LAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       143 ~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .++.+|..     ||.|+.+||+..+.
T Consensus        81 e~~~~~~~~D~d~dG~i~~~EF~~~m~  107 (109)
T d1rwya_          81 ETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            55555553     79999999999764

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.54  E-value=8e-07  Score=71.06  Aligned_cols=136  Identities=13%  Similarity=0.200  Sum_probs=91.0

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-HHHHHhhcCCCCCeeehHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-NWLLSAYSVESLGRIRVFSIKVAL   86 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-~~lf~~fD~~~~G~I~~~ef~~aL   86 (275)
                      +-++|+..-.+   .+..|+..|+..++..+........     ...+....... .|.-..-|.+++|.|++.+|..++
T Consensus         8 l~~~F~~~D~d---~dG~Is~~Ef~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~   79 (174)
T d2scpa_           8 MKTYFNRIDFD---KDGAITRMDFESMAERFAKESEMKA-----EHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSM   79 (174)
T ss_dssp             HHHHHHHHCTT---CSSEECHHHHHHHHHHHHHHSCCCT-----THHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHH
T ss_pred             HHHHHHHHccC---CCCcEeHHHHHHHHHHHhccccchh-----HHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHH
Confidence            44567776655   3678999998888877664433211     11222222222 122224478899999999999999


Q ss_pred             HHhcCCCh-----hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCccc
Q psy4949          87 ATMCSGKL-----MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVT  155 (275)
Q Consensus        87 s~Lc~G~l-----~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is  155 (275)
                      .-+....-     .+.++.+|..+ .|++|.||+.||..+++.+ .            .++..++.+|..     +|.|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~-~------------~~~~~~~~~f~~~D~d~dG~Is  146 (174)
T d2scpa_          80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G------------LDKTMAPASFDAIDTNNDGLLS  146 (174)
T ss_dssp             HHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-T------------CCGGGHHHHHHHHCTTCSSEEC
T ss_pred             HhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH-h------------hhhHHHHHHHhhcCCCCCCcEe
Confidence            88876642     44467899999 7999999999999887642 1            123345555653     79999


Q ss_pred             HHHHHHHHh
Q psy4949         156 VNDFMDTMM  164 (275)
Q Consensus       156 ~~eFl~~~~  164 (275)
                      .+||++.+.
T Consensus       147 ~~Ef~~~~~  155 (174)
T d2scpa_         147 LEEFVIAGS  155 (174)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987543

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.5e-07  Score=70.69  Aligned_cols=127  Identities=17%  Similarity=0.252  Sum_probs=85.3

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +-++|...--+   .+..|+..|+..+++.    +.   +   ....+.     ..-++..+|.+++|.|++.+|...+.
T Consensus         8 lk~~F~~~D~~---~~G~Is~~e~~~~l~~----~~---~---~~~~~~-----~~~~~~~~d~~~~g~i~~~ef~~~~~   69 (141)
T d2obha1           8 IREAFDLFDAD---GTGTIDVKELKVAMRA----LG---F---EPKKEE-----IKKMISEIDKEGTGKMNFGDFLTVMT   69 (141)
T ss_dssp             HHHHHHTTCTT---CCSEEEGGGHHHHHHH----TT---C---CCCHHH-----HHHHHHHHTTTCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CCCeEeHHHHHHHHHh----cC---C---chhHHH-----HHHHHHhhccCCCCeechHHHHHHHH
Confidence            44566655433   3556777774443332    21   1   112222     23567888999999999999999987


Q ss_pred             HhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHH
Q psy4949          88 TMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFM  160 (275)
Q Consensus        88 ~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl  160 (275)
                      ....+ ...+.++-+|..+ .|++|+|+..+|..+++.+       |.    .-++..+..+|..     +|.|+.+||+
T Consensus        70 ~~~~~~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~-------g~----~l~~~e~~~l~~~~D~d~dG~i~~~EF~  138 (141)
T d2obha1          70 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL-------GE----NLTDEELQEMIDEADRDGDGEVSEQEFL  138 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred             HHHhhhccHHHHHHHHHHhcccCCCCccHHHHHHHHHHh-------CC----CCCHHHHHHHHHHHCCCCCCCEeHHHHH
Confidence            66543 3467789999999 6899999999998887742       21    1134455555553     6999999999


Q ss_pred             HHH
Q psy4949         161 DTM  163 (275)
Q Consensus       161 ~~~  163 (275)
                      ..+
T Consensus       139 ~~m  141 (141)
T d2obha1         139 RIM  141 (141)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            853

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.48  E-value=3.3e-08  Score=81.28  Aligned_cols=128  Identities=14%  Similarity=0.196  Sum_probs=92.8

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +-++|+...-+   .+..|+..++..+|.    .+..      .+..+     ...-+++.+|.+++|.|++.+|+.+..
T Consensus        12 l~~~F~~~D~d---~dG~Is~~e~~~~l~----~l~~------~~~~~-----~~~~~~~~~d~~~~g~i~~~ef~~~~~   73 (182)
T d1s6ia_          12 LKELFKMIDTD---NSGTITFDELKDGLK----RVGS------ELMES-----EIKDLMDAADIDKSGTIDYGEFIAATV   73 (182)
T ss_dssp             HHHHHHTTSSS---SSSCEEHHHHHHHHT----TTTC------CCCHH-----HHHHHHHHTCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHcCC---CcCCCCHHHHHHHHH----HcCC------ccccc-----cchhhhhhhhccccccchHHHHHHHHH
Confidence            44667665543   356788888544443    2211      11222     245689999999999999999999999


Q ss_pred             HhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHH
Q psy4949          88 TMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMD  161 (275)
Q Consensus        88 ~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~  161 (275)
                      ......-.+.++.+|..+ .|++|.|+..+|..+++..             +-++..++.+|..     ||.|+.+||+.
T Consensus        74 ~~~~~~~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~-------------gl~~~ev~~~f~~~D~d~DG~Is~~EF~~  140 (182)
T d1s6ia_          74 HLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF-------------GLDDIHIDDMIKEIDQDNDGQIDYGEFAA  140 (182)
T ss_dssp             TSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT-------------TCCTTHHHHHHHHHCSSSSSEEETTHHHH
T ss_pred             hhcccccHHHHHHHHHHHhhcCCCccchhhhhhhhhhc-------------CccHHHHHHHHHHhhcCCCCeEeHHHHHH
Confidence            888888899999999999 7899999999987666531             2234445555543     78999999999


Q ss_pred             HHhcC
Q psy4949         162 TMMSE  166 (275)
Q Consensus       162 ~~~~d  166 (275)
                      .+++.
T Consensus       141 ~m~~~  145 (182)
T d1s6ia_         141 MMRKR  145 (182)
T ss_dssp             TTSCC
T ss_pred             HHHhC
Confidence            77654

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.46  E-value=7.2e-07  Score=72.97  Aligned_cols=122  Identities=18%  Similarity=0.207  Sum_probs=78.9

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +-++|+...-+   .+..|+..|+..+|+.+.          ..++.++     +..+++.+|.+++|+|++.+|.....
T Consensus        20 l~~~F~~~D~d---~dG~Is~~El~~~l~~l~----------~~~s~~~-----~~~l~~~~d~d~~~~i~~~ef~~~~~   81 (182)
T d1y1xa_          20 LMEWFRAVDTD---GSGAISVPELNAALSSAG----------VPFSLAT-----TEKLLHMYDKNHSGEITFDEFKDLHH   81 (182)
T ss_dssp             HHHHHHHHCTT---CSSSBCHHHHHHHHCBTT----------BCCCHHH-----HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CcCCCCHHHHHHHHHHhc----------ccCchhh-----hhhhhccccccccccccccccccccc
Confidence            44455554333   356678888555543321          1122222     35677889999999999999977654


Q ss_pred             HhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHH
Q psy4949          88 TMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMD  161 (275)
Q Consensus        88 ~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~  161 (275)
                            ...+++-+|+.+ .|++|.|++.+|..+|+.       +|..    .++..++.+|..     +|.|+.+||++
T Consensus        82 ------~~~~~~~~F~~~D~~~~g~I~~~el~~~l~~-------~g~~----ls~~e~~~i~~~~d~~~dg~I~~~eF~~  144 (182)
T d1y1xa_          82 ------FILSMREGFRKRDSSGDGRLDSNEVRAALLS-------SGYQ----VSEQTFQALMRKFDRQRRGSLGFDDYVE  144 (182)
T ss_dssp             ------HHHHHHHHHHHHCTTSSSCBCHHHHHHHHHT-------TSCC----CCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             ------cccccccchhccccccchhhhhHHHHHHHHH-------hCCc----hhHHHHHHHHhhcccCCCCCcCHHHHHH
Confidence                  246778889999 688999999998777653       2221    134445554442     68999999998


Q ss_pred             HHh
Q psy4949         162 TMM  164 (275)
Q Consensus       162 ~~~  164 (275)
                      .+.
T Consensus       145 ~~~  147 (182)
T d1y1xa_         145 LSI  147 (182)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.46  E-value=3.6e-07  Score=71.58  Aligned_cols=123  Identities=13%  Similarity=0.155  Sum_probs=85.0

Q ss_pred             HHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          10 EAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        10 e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      +||.....+   .+..|+..++..+|+.+    ... |     ..++         +..+|.+.+|.|++.+|...+...
T Consensus         9 e~F~~~D~d---~dG~I~~~el~~~l~~l----g~~-~-----t~~e---------i~~~~~~~~~~i~~~eF~~~~~~~   66 (140)
T d1ggwa_           9 QAFSLFDRH---GTGRIPKTSIGDLLRAC----GQN-P-----TLAE---------ITEIESTLPAEVDMEQFLQVLNRP   66 (140)
T ss_dssp             HHHHHTCSS---SSSEECHHHHHHHHHHT----SCC-C-----CHHH---------HHHHHTTSCSSEEHHHHHHHHCTT
T ss_pred             HHHHHHCCC---CCCeECHHHHHHHHHHH----Hhh-h-----HHHh---------hhhhhccccccccchhhhhhhhhh
Confidence            456555543   46789999977666543    211 2     2222         133578999999999999988755


Q ss_pred             cCCC---hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc----CCCcccHHHHHH
Q psy4949          90 CSGK---LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS----GNGKVTVNDFMD  161 (275)
Q Consensus        90 c~G~---l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~----~d~~Is~~eFl~  161 (275)
                      ...+   ..+-++-+|+.+ .|++|.|+..+|..+|+.+       |+..    +++.++.+|.    .+|.|+.+||++
T Consensus        67 ~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-------g~~l----t~~e~~~l~~~~d~~dG~I~y~eF~~  135 (140)
T d1ggwa_          67 NGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-------GEKL----SNEEMDELLKGVPVKDGMVNYHDFVQ  135 (140)
T ss_dssp             SSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-------HSCS----CHHHHHHHHHHTTCSSCCSTTTHHHH
T ss_pred             hhcchhhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHc-------CCCC----CHHHHHHHHHhhCCCCCEEeHHHHHH
Confidence            5433   344588999999 6999999999999988754       3321    3344444443    268999999999


Q ss_pred             HHhc
Q psy4949         162 TMMS  165 (275)
Q Consensus       162 ~~~~  165 (275)
                      .+++
T Consensus       136 ~m~s  139 (140)
T d1ggwa_         136 MILA  139 (140)
T ss_dssp             HHHC
T ss_pred             HHhc
Confidence            8875

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.44  E-value=7.4e-07  Score=69.99  Aligned_cols=130  Identities=15%  Similarity=0.130  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |..+-++|+...-+   .+..|+..++..+|..+    ....|+      +        .++..++.+.+|.|++.+|+.
T Consensus         6 i~el~e~F~~~D~~---~~G~I~~~e~~~~l~~l----g~~~~~------~--------~~~~~~~~~~~g~i~~~eF~~   64 (145)
T d2mysb_           6 IEDFKEAFTVIDQN---ADGIIDKDDLRETFAAM----GRLNVK------N--------EELDAMIKEASGPINFTVFLT   64 (145)
T ss_pred             HHHHHHHHHHHCCC---CCCCCCHHHHHHHHHHh----CCCcch------H--------HHHHHHHHhccCceeechhhh
Confidence            34455667666533   46778999966665443    211111      1        234566778999999999999


Q ss_pred             HHHH-hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHH
Q psy4949          85 ALAT-MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVN  157 (275)
Q Consensus        85 aLs~-Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~  157 (275)
                      ++.- ++.....+.++.+|+.+ .|++|.|+..+|..+|+.+       |+.    .++..++.+|..     +|.|+.+
T Consensus        65 ~~~~~~~~~~~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~-------g~~----ls~~e~~~~~~~~d~d~dg~I~y~  133 (145)
T d2mysb_          65 MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-------GGR----FTPEEIKNMWAAFPPDVAGNVDYK  133 (145)
T ss_pred             hhhhcccccchHHHHHHHHHhhhhcccchhhHHHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCCeEeHH
Confidence            8855 45556677899999999 7999999999999888753       332    134444444443     6899999


Q ss_pred             HHHHHHhcC
Q psy4949         158 DFMDTMMSE  166 (275)
Q Consensus       158 eFl~~~~~d  166 (275)
                      +|+..++..
T Consensus       134 eF~~~l~~~  142 (145)
T d2mysb_         134 NICYVITHG  142 (145)
T ss_pred             HHHHHhccC
Confidence            999987653

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.44  E-value=1.6e-06  Score=68.59  Aligned_cols=140  Identities=16%  Similarity=0.223  Sum_probs=99.0

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHH---HHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLS---GLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~---~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      ..+-++|+..-.+   .+..|+..|+..++..+...+... +.  ........   .-..+-++...|.+++|.|+..++
T Consensus         7 ~~l~~~F~~~D~d---~dG~Is~~Ef~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   80 (176)
T d1nyaa_           7 DRLKKRFDRWDFD---GNGALERADFEKEAQHIAEAFGKD-AG--AAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF   80 (176)
T ss_dssp             HHHHHHHHHCCSS---CCSSBCSHHHHHHHHHHHHHTSSC-SS--SHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred             HHHHHHHHHHcCC---CCCcCcHHHHHHHHHHHHHHcCCc-cc--HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHH
Confidence            3456677776644   477899999999988887654332 11  11111111   222345789999999999999999


Q ss_pred             HHHHHHhcCCCh--------hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---
Q psy4949          83 KVALATMCSGKL--------MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---  150 (275)
Q Consensus        83 ~~aLs~Lc~G~l--------~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---  150 (275)
                      ...+.-......        .+.++.+|..+ .|++|.|+++||..+++.+             +-++..++.+|..   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~-------------~~~~~~~~~~f~~~D~  147 (176)
T d1nyaa_          81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL-------------GMSKAEAAEAFNQVDT  147 (176)
T ss_dssp             HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT-------------TCCHHHHHHHHHHHCT
T ss_pred             HHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc-------------CCcHHHHHHHHHHHCC
Confidence            998877665432        34567899999 6999999999998877642             2245566777664   


Q ss_pred             --CCcccHHHHHHHHh
Q psy4949         151 --NGKVTVNDFMDTMM  164 (275)
Q Consensus       151 --d~~Is~~eFl~~~~  164 (275)
                        +|.|+.+||+..+.
T Consensus       148 d~dG~i~~~Ef~~~~~  163 (176)
T d1nyaa_         148 NGNGELSLDELLTAVR  163 (176)
T ss_dssp             TCSSEEEHHHHHHHHS
T ss_pred             CCCCcEeHHHHHHHHH
Confidence              68999999999763

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.43  E-value=2.5e-06  Score=66.63  Aligned_cols=127  Identities=16%  Similarity=0.196  Sum_probs=86.1

Q ss_pred             HHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHH
Q psy4949           6 WNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA   85 (275)
Q Consensus         6 ~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~a   85 (275)
                      ..+-++|+...-+   .+..|+..++..+|+.    +... |+     .++...         +..+++|.|++.+|+..
T Consensus         7 ~e~~~~F~~~D~d---~~G~I~~~el~~~l~~----lg~~-~~-----~~el~~---------~~~~~~~~i~~~eF~~~   64 (142)
T d1wdcb_           7 QEMKEAFSMIDVD---RDGFVSKEDIKAISEQ----LGRA-PD-----DKELTA---------MLKEAPGPLNFTMFLSI   64 (142)
T ss_dssp             HHHHHHHHHHCTT---CSSSCCHHHHHHHHHH----HSSC-CC-----HHHHHH---------HHTTSSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHcCC---CCCcCChHHHHHHHHH----hhcC-CC-----HHHHHH---------HHHhccCcccccccccc
Confidence            3455566655433   3667999996655543    3221 22     222211         12478999999999998


Q ss_pred             HHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC----CCcccHHHH
Q psy4949          86 LATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG----NGKVTVNDF  159 (275)
Q Consensus        86 Ls~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~----d~~Is~~eF  159 (275)
                      ++-...+ ..++.++-+|+.| .|++|+|+..+|..+|+.+       |+.    -++..++.+|..    +|.|+.+||
T Consensus        65 ~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-------g~~----lt~~e~~~l~~~~d~~~G~I~y~eF  133 (142)
T d1wdcb_          65 FSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-------GDN----FNKDEMRMTFKEAPVEGGKFDYVKF  133 (142)
T ss_dssp             HHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-------SSC----CCHHHHHHHHHHCCEETTEECHHHH
T ss_pred             ccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHc-------ccc----CCHHHHHHHHHHhCCCCCEEcHHHH
Confidence            8865544 5678899999999 7999999999999888753       332    134445555543    589999999


Q ss_pred             HHHHhc
Q psy4949         160 MDTMMS  165 (275)
Q Consensus       160 l~~~~~  165 (275)
                      +..++.
T Consensus       134 ~~~l~~  139 (142)
T d1wdcb_         134 TAMIKG  139 (142)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            997754

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.41  E-value=2.4e-06  Score=68.87  Aligned_cols=138  Identities=12%  Similarity=0.188  Sum_probs=90.8

Q ss_pred             chHHHHHHHHHHcCCCCcC-CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCe
Q psy4949           3 IDIWNVIEAFRENGLNAIE-LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGR   76 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~-~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~   76 (275)
                      ||...+.++++.-|.+..+ ....++...    +..+...+-+..  .+.++.+++..+..     ..+|+.||.+++|+
T Consensus        20 I~~~EL~~~L~~~~~~~~~~~~~~~~~~~----~~~l~~~~d~d~--~g~i~~~ef~~~~~~~~~~~~~f~~~D~d~~G~   93 (173)
T d1alva_          20 VSATELMNILNKVVTRHPDLKTDGFGIDT----CRSMVAVMDSDT--TGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGT   93 (173)
T ss_dssp             BCHHHHHHHHHHHHHTCSTTCCSCCCHHH----HHHHHHHHCTTC--SSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSS
T ss_pred             CCHHHHHHHHHHhCCCcchhhhccCCHHH----HHHHHHHhccCC--CCcccchhhhhhhhhhhHHHHHHHHhccCCCCe
Confidence            5666677777776655432 234466655    455555555542  36788777765532     24899999999999


Q ss_pred             eehHHHHHHHHHhcCCChhhHH-HHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc---C--
Q psy4949          77 IRVFSIKVALATMCSGKLMDKL-RYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS---G--  150 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKl-r~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~---~--  150 (275)
                      |+..+++.+|..+ +..+.+.. +.++..+.|++|.|+.+||..++..+                 ......|+   .  
T Consensus        94 I~~~el~~~L~~~-g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~~-----------------~~~~~~f~~~D~d~  155 (173)
T d1alva_          94 IGSSELPGAFEAA-GFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRL-----------------DAMFRAFKSLDKDG  155 (173)
T ss_dssp             BCTTTHHHHHHHH-TCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHHH-----------------HHHHHHHHHHSSSC
T ss_pred             ecHHHHHHHHHHH-HHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHHH-----------------HHHHHHHHHhCCCC
Confidence            9999999999875 44455444 44444458999999999997665432                 12223344   3  


Q ss_pred             CCccc--HHHHHHHHh
Q psy4949         151 NGKVT--VNDFMDTMM  164 (275)
Q Consensus       151 d~~Is--~~eFl~~~~  164 (275)
                      +|.||  .+||+...+
T Consensus       156 ~G~it~~~~efl~~~~  171 (173)
T d1alva_         156 TGQIQVNIQEWLQLTM  171 (173)
T ss_dssp             CSEEEEEHHHHHHHHH
T ss_pred             CCcEEecHHHHHHHHH
Confidence            57775  678888654

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.41  E-value=8.7e-07  Score=69.25  Aligned_cols=109  Identities=18%  Similarity=0.157  Sum_probs=75.3

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH--------------HHHHHHh
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL--------------LNWLLSA   68 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~--------------~~~lf~~   68 (275)
                      |++..+..+++..|++..       ..++..++..    ...+-...+.|+.+++..++              +.-+|++
T Consensus        21 I~~~el~~~l~~lg~~~~-------~~e~~~~~~~----~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~   89 (145)
T d2mysc_          21 ITASQVGDIARALGQNPT-------NAEINKILGN----PSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRV   89 (145)
T ss_pred             ECHHHHHHHHHHhhhcch-------hhhhHHHHHH----HhhcccccCccchhHHHHHHhhhhhccccchHHHHHHHHHH
Confidence            567777788888787642       2343333333    22221122455655554443              2257999


Q ss_pred             hcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          69 YSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        69 fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      ||.+++|.|+..+|+.+|..+.-.-..+-+..+++...|++|.|+..||..+|-
T Consensus        90 ~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          90 FDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             hhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhhcCCCCCeEEHHHHHHHHh
Confidence            999999999999999999988666667778888886678999999999976653

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.38  E-value=3.4e-07  Score=63.10  Aligned_cols=58  Identities=9%  Similarity=0.157  Sum_probs=53.5

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEY  120 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~  120 (275)
                      .-+|+.||++++|+|++.+++.++..+.-.-..+.++.+|+.+ .|+||.|+-.+|..+
T Consensus         6 ~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           6 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            4689999999999999999999999998888888899999999 799999999999765

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=98.37  E-value=4.7e-07  Score=64.28  Aligned_cols=62  Identities=6%  Similarity=0.134  Sum_probs=56.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +.-+|+.||++++|+|+..+++.+|..+...-..+.++.+|+.+ .|++|.|+.+||..+++.
T Consensus        11 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_          11 ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            35789999999999999999999999999888888999999999 799999999999887753

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=98.37  E-value=1.3e-06  Score=66.35  Aligned_cols=61  Identities=16%  Similarity=0.228  Sum_probs=51.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-C-Ch-hhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-G-KL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G-~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||++++|.|+..|++.+|..+.. | .+ ++.++.+|+.+ .|+||.|+..||..+++
T Consensus        43 l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d5pala_          43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            567899999999999999999999876643 3 34 45589999999 79999999999988775

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=1.2e-06  Score=68.57  Aligned_cols=119  Identities=13%  Similarity=0.201  Sum_probs=80.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhc------CCChh
Q psy4949          22 LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMC------SGKLM   95 (275)
Q Consensus        22 ~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------~G~l~   95 (275)
                      .+..|++.|+..+|+++-    .      .++.++.    -+.+...+|.+.+|.|++.+|...+....      .....
T Consensus        15 ~~G~I~~~el~~~l~~lg----~------~~s~~ei----~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~   80 (146)
T d1m45a_          15 GQGAIAKDSLGDYLRAIG----Y------NPTNQLV----QDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT   80 (146)
T ss_dssp             CCSEEEGGGHHHHHHHTT----C------CCCHHHH----HHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred             CcCCCCHHHHHHHHHHcC----C------chhHHHH----hhhhccccccccccccccchhhhhhhhhcccccccccchH
Confidence            367899999776665542    1      1233333    23344677888899999999988776442      23445


Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +.++.+|+.+ .|++|.|++.+|..+|+.+       |+.    -++..++.+|..     +|.|+.+||++.+++
T Consensus        81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-------g~~----l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~  145 (146)
T d1m45a_          81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGL-------GEK----LTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  145 (146)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-------TTC----CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHhhccccccccchhhhhhhhccc-------CCc----chHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            6789999999 7999999999999888753       321    235556666654     689999999998764

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.36  E-value=3.3e-07  Score=65.10  Aligned_cols=62  Identities=10%  Similarity=0.128  Sum_probs=55.9

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +.-+|+.||++++|+|++.+++.+|..+.-.-..+.++-+|+.+ .|++|.|+..||..+++.
T Consensus        11 l~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_          11 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             HHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            34689999999999999999999999988877788899999999 799999999999887764

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.36  E-value=9.2e-08  Score=72.86  Aligned_cols=83  Identities=16%  Similarity=0.262  Sum_probs=56.5

Q ss_pred             CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-
Q psy4949          72 ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-  149 (275)
Q Consensus        72 ~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-  149 (275)
                      +++|.|++.+|...+. + .+.-.++++++|.+| .|++|+|+.+||..+|+.+       +.. ....+++.++.+|. 
T Consensus        19 ~~~~s~~~~~F~~~~~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l-------~~~-~~~l~~~~~~~~~~~   88 (108)
T d1rroa_          19 QDPDTFEPQKFFQTSG-L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKF-------QSD-ARELTESETKSLMDA   88 (108)
T ss_dssp             CSTTCCCHHHHHHHHS-G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGT-------CTT-SCCCCHHHHHHHHHH
T ss_pred             ccCCCccHHHHHHHHc-c-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHH-------Hhc-cCCCCHHHHHHHHHH
Confidence            4556788888866554 2 456677889999999 6889999999987666532       111 01123555666654 


Q ss_pred             ----CCCcccHHHHHHHHh
Q psy4949         150 ----GNGKVTVNDFMDTMM  164 (275)
Q Consensus       150 ----~d~~Is~~eFl~~~~  164 (275)
                          +||.|+.+||+..++
T Consensus        89 ~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          89 ADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HCCSSSSSEEHHHHHHHHT
T ss_pred             hCCCCCCeEeHHHHHHHHc
Confidence                368999999998764

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=98.36  E-value=3.7e-07  Score=65.74  Aligned_cols=60  Identities=17%  Similarity=0.341  Sum_probs=52.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .-+|+.||.|++|+|+..+++.+|..+- ....+-++.+|+.+ .|+||.|+..||..+++.
T Consensus         9 ~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           9 ERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4699999999999999999999998774 45666789999999 799999999999887764

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=1e-05  Score=65.74  Aligned_cols=86  Identities=13%  Similarity=0.123  Sum_probs=68.5

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHHHH-----HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccC
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLN-----WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDC  108 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~~~-----~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~  108 (275)
                      +..++..+-++.  .+.|+.+++..++.+     ..|+.||.+++|.|+..+|+.++......--++-+..+++.+ .|+
T Consensus        58 ~~~l~~~~D~d~--~g~i~~~EFl~~~~~~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~  135 (181)
T d1hqva_          58 VRSIISMFDREN--KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG  135 (181)
T ss_dssp             HHHHHHHHCCSS--SSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSC
T ss_pred             HHHHhhcccccc--ccchhhhHHHhhhhhccccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCC
Confidence            556666665553  368999998887664     579999999999999999999999776555666678889988 689


Q ss_pred             CCceeHHHHHHHHH
Q psy4949         109 NGHLVAWKFNEYLQ  122 (275)
Q Consensus       109 nG~i~~~el~~~L~  122 (275)
                      +|.|+.++|..++.
T Consensus       136 dg~Is~~eF~~~~~  149 (181)
T d1hqva_         136 RGQIAFDDFIQGCI  149 (181)
T ss_dssp             SSCBCHHHHHHHHH
T ss_pred             CCcCcHHHHHHHHH
Confidence            99999999865553

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.34  E-value=7.9e-07  Score=63.92  Aligned_cols=62  Identities=11%  Similarity=0.150  Sum_probs=55.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.||.+++|.|+..+++.+|..+...-.++.++.+|+.+ .|++|.|+-.+|..++..-
T Consensus        17 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~k   79 (81)
T d1avsa_          17 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   79 (81)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            3589999999999999999999999887777777789999999 7999999999998887643

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.34  E-value=3.7e-06  Score=68.55  Aligned_cols=135  Identities=16%  Similarity=0.184  Sum_probs=95.4

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHH-----HHHHhhcCCCCCee
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLN-----WLLSAYSVESLGRI   77 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~-----~lf~~fD~~~~G~I   77 (275)
                      |+...+.++++..|.+       ++..+    +..++..+.++  ..+.|+.++..+.+..     -.|..||.+++|+|
T Consensus        35 Is~~El~~~l~~l~~~-------~s~~~----~~~l~~~~d~d--~~~~i~~~ef~~~~~~~~~~~~~F~~~D~~~~g~I  101 (182)
T d1y1xa_          35 ISVPELNAALSSAGVP-------FSLAT----TEKLLHMYDKN--HSGEITFDEFKDLHHFILSMREGFRKRDSSGDGRL  101 (182)
T ss_dssp             BCHHHHHHHHCBTTBC-------CCHHH----HHHHHHHHCTT--CSSSBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCB
T ss_pred             CCHHHHHHHHHHhccc-------Cchhh----hhhhhcccccc--ccccccccccccccccccccccchhccccccchhh
Confidence            5666777777666543       55566    55666666555  2367888887665432     37999999999999


Q ss_pred             ehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC--CCcc
Q psy4949          78 RVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG--NGKV  154 (275)
Q Consensus        78 ~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~--d~~I  154 (275)
                      +..+|+.+|..+-..-..+-+..+|+.+ .|++|.|+..|+..++..+-.+.             +.- ..|..  +|.|
T Consensus       102 ~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~~~~-------------~~F-~~~D~~~~G~i  167 (182)
T d1y1xa_         102 DSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVR-------------NVF-AFYDRERTGQV  167 (182)
T ss_dssp             CHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH-------------HHH-HHHCTTCCSEE
T ss_pred             hhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHH-------------HHH-HHhCCCCCCcE
Confidence            9999999998765555677789999999 69999999999988765442221             111 22443  5765


Q ss_pred             --cHHHHHHHHh
Q psy4949         155 --TVNDFMDTMM  164 (275)
Q Consensus       155 --s~~eFl~~~~  164 (275)
                        +.++|+.+..
T Consensus       168 s~~~~~f~~~~~  179 (182)
T d1y1xa_         168 TFTFDTFIGGSV  179 (182)
T ss_dssp             EEEHHHHHHHHH
T ss_pred             EeeHHHHHHHHH
Confidence              5789998763

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.34  E-value=1.5e-06  Score=65.84  Aligned_cols=61  Identities=11%  Similarity=0.121  Sum_probs=53.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCC---ChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSG---KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G---~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||++++|.|+..||+.+|..+..+   -..+..+.+|+.+ .|+||.|+.+||..+++
T Consensus        43 ~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~  107 (109)
T d1rwya_          43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             HHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            3468999999999999999999999887653   3467789999999 79999999999988876

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.33  E-value=3.6e-07  Score=69.44  Aligned_cols=61  Identities=15%  Similarity=0.172  Sum_probs=52.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-C-C-hhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS-G-K-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G-~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +..+|+.||.+++|+|++.||+.+|..+.. | + -++.++.+|+.+ .|+||.|+..||..+++
T Consensus        43 l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            457999999999999999999999987743 3 2 357799999999 69999999999988775

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=98.32  E-value=6e-07  Score=63.17  Aligned_cols=60  Identities=13%  Similarity=0.204  Sum_probs=54.0

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .-+|+.||++++|.|++.+++.+|..+...--++.++.+|+.+ .|++|.|+..+|..++.
T Consensus        11 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1          11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            3589999999999999999999999987777788899999999 79999999999987664

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.31  E-value=4.2e-07  Score=69.02  Aligned_cols=89  Identities=18%  Similarity=0.282  Sum_probs=64.2

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDT  142 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~  142 (275)
                      -+++..|.  +|.|++.+|...+. + .++-.+++|.+|++| .|++|.|++.++..+|+.+       ++. ....+++
T Consensus        12 ~~~~~~~~--~gsi~~~eF~~~~~-l-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-------~~~-~~~~~~~   79 (107)
T d2pvba_          12 AALAACSA--ADSFKHKEFFAKVG-L-ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF-------SPS-ARALTDA   79 (107)
T ss_dssp             HHHHHTCS--TTCCCHHHHHHHHT-G-GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT-------CTT-SCCCCHH
T ss_pred             HHHHhccC--CCCcCHHHHHHHHh-c-ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHh-------hcc-cccCCHH
Confidence            34555554  46799999987766 3 456678999999999 7999999999987766542       221 0122456


Q ss_pred             HHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         143 LAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       143 ~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      .++.+|..     +|+|+.+||+..++
T Consensus        80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          80 ETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            67776653     79999999998764

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.30  E-value=1.1e-06  Score=66.78  Aligned_cols=73  Identities=15%  Similarity=0.239  Sum_probs=57.6

Q ss_pred             CccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-C-Ch-hhHHHHhchhh-ccCCCceeHHH
Q psy4949          50 QQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATMCS-G-KL-MDKLRYIFSQL-CDCNGHLVAWK  116 (275)
Q Consensus        50 ~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-G-~l-~dKlr~~F~ly-~D~nG~i~~~e  116 (275)
                      |.|+.+++..++         +..+|+.||.+++|+|+..|++.+|..+.. | .+ ++-++.+|+.+ .|+||.|+.+|
T Consensus        22 G~idf~EF~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~E  101 (109)
T d1pvaa_          22 GSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE  101 (109)
T ss_dssp             TCCCHHHHHHHHTCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHH
T ss_pred             CCCcHHHHHHHHHHccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHH
Confidence            456666655443         346899999999999999999999887653 2 34 45678899988 79999999999


Q ss_pred             HHHHHH
Q psy4949         117 FNEYLQ  122 (275)
Q Consensus       117 l~~~L~  122 (275)
                      |..++.
T Consensus       102 F~~~m~  107 (109)
T d1pvaa_         102 FETLVH  107 (109)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988775

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.29  E-value=5e-06  Score=67.22  Aligned_cols=63  Identities=11%  Similarity=0.025  Sum_probs=52.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.-+|+.||.+++|.|+..||+.++..+..+-.++.++.+|+.+ .|+||.|+.+||..++...
T Consensus       109 ~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~~  172 (189)
T d1qv0a_         109 GDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF  172 (189)
T ss_dssp             HHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            34579999999999999999999999988888888999999999 7999999999997776654

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=98.27  E-value=6.2e-07  Score=64.50  Aligned_cols=61  Identities=16%  Similarity=0.229  Sum_probs=54.1

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +.-+|+.||.+++|+|++.+++.+|..+......+.+..+|+.+ .|+||.|+.++|..+++
T Consensus        17 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~   78 (81)
T d1fi5a_          17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK   78 (81)
T ss_dssp             HHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            35689999999999999999999998876666677799999999 79999999999988775

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.23  E-value=6.5e-06  Score=67.21  Aligned_cols=138  Identities=12%  Similarity=0.133  Sum_probs=87.5

Q ss_pred             chHHHHHHHHHHcCCCCcC-CCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH-----HHHHHhhcCCCCCe
Q psy4949           3 IDIWNVIEAFRENGLNAIE-LQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL-----NWLLSAYSVESLGR   76 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~-~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~-----~~lf~~fD~~~~G~   76 (275)
                      |+...+-.+++..|.+... ....++...    +..+...+-+..  .+.|+.+++..+..     ..+|+.||++++|+
T Consensus        34 Is~~EL~~~L~~~~~~~~~~~~~~~s~~~----~~~l~~~~D~d~--~G~I~~~EF~~~~~~~~~~~~~F~~~D~d~sG~  107 (186)
T d1df0a1          34 ISAFELQTILRRVLAKREDIKSDGFSIET----CKIMVDMLDEDG--SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT  107 (186)
T ss_dssp             EEHHHHHHHHHHHHHC----CCCCCCHHH----HHHHHHHHCCSS--SSEECHHHHHHHHHHHHHHHHHHHHHCTTCCSC
T ss_pred             EcHHHHHHHHHHhcccccccccccCCHHH----HHHHHHHHcCCC--CCcccHHHHHHHHHhHHHHHHHHHhhCCCCCCc
Confidence            3444555566655544321 234566666    455555554442  36788888876643     35899999999999


Q ss_pred             eehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----C
Q psy4949          77 IRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----N  151 (275)
Q Consensus        77 I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d  151 (275)
                      |+..|++.+|.-+-..-..+-.+.+...+.|++|.|+.++|..++..+                 ..+...|..     +
T Consensus       108 I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~l-----------------~~~~~~F~~~D~~~~  170 (186)
T d1df0a1         108 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL-----------------EILFKIFKQLDPENT  170 (186)
T ss_dssp             EEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHHH-----------------HHHHHHHHHHCTTCC
T ss_pred             ccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHHH-----------------HHHHHHHHHhCCCCC
Confidence            999999999986533333333455555558999999999986655322                 233344543     5


Q ss_pred             Ccc--cHHHHHHHH
Q psy4949         152 GKV--TVNDFMDTM  163 (275)
Q Consensus       152 ~~I--s~~eFl~~~  163 (275)
                      |.|  +.+||+...
T Consensus       171 G~i~l~~~ef~~~~  184 (186)
T d1df0a1         171 GTIQLDLISWLSFS  184 (186)
T ss_dssp             SEEEEEHHHHHHHH
T ss_pred             CcEEecHHHHHHHh
Confidence            766  567888744

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=98.23  E-value=2.8e-06  Score=66.04  Aligned_cols=93  Identities=13%  Similarity=0.211  Sum_probs=74.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||++++|.|+..+|..++..+......+..+.+|+.+ .+++|.|+..++..++.....-+.          ..
T Consensus        12 ~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~----------~~   81 (146)
T d1exra_          12 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD----------SE   81 (146)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH----------HH
T ss_pred             HHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccC----------hH
Confidence            4689999999999999999999999887777777789999999 789999999999877754322211          23


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +.++.+|..     +|.|+.+||..++..
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~  110 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTN  110 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            455666663     589999999998864

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.21  E-value=1.7e-06  Score=58.76  Aligned_cols=56  Identities=18%  Similarity=0.228  Sum_probs=51.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFN  118 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~  118 (275)
                      .-+|+.||++++|+|+..+|+.+|..+.-.-..+.+..+|+.+ .|++|.|+.++|.
T Consensus         4 ~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1           4 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             HHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHH
T ss_pred             HHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhc
Confidence            3579999999999999999999999998888889999999999 7999999999874

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=1.8e-06  Score=61.15  Aligned_cols=69  Identities=9%  Similarity=0.173  Sum_probs=57.2

Q ss_pred             cChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          52 VHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        52 v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ++.++..++  .-+|+.||.+++|+|+..+++.+|..+...--.+.++.+|+.+ .|++|.|+.++|..++.
T Consensus         4 lt~eqi~el--~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_           4 LTEEQIAEF--KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             CCHHHHHHH--HHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             CCHHHHHHH--HHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            344444332  3589999999999999999999999887777788899999999 79999999999977653

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.20  E-value=4.1e-06  Score=65.94  Aligned_cols=61  Identities=15%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ..+|+.||.+++|.|++.+|...+..+...-.++.++-+|+.+ .|++|.|+..||..+|+-
T Consensus        94 ~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          94 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             HHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            3589999999999999999999887666666677789999999 699999999999988863

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.4e-06  Score=65.93  Aligned_cols=116  Identities=11%  Similarity=0.187  Sum_probs=72.1

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHHHH-----------HHHHhhc--CCCCCeeehHHHHHHHHHhcCCC---hhhHH
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLN-----------WLLSAYS--VESLGRIRVFSIKVALATMCSGK---LMDKL   98 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~~~-----------~lf~~fD--~~~~G~I~~~ef~~aLs~Lc~G~---l~dKl   98 (275)
                      +++.|..+=+..  .|.|+.++....+..           -+++.+|  .+++|.|++.+|...+.......   ..+.+
T Consensus         2 ~ke~F~~~D~d~--~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l   79 (139)
T d1w7jb1           2 FKEAFELFDRVG--DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY   79 (139)
T ss_dssp             HHHHHHHHCCSS--SSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred             HHHHHHHHhCCC--CCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHH
Confidence            345565554432  356766665444332           2333344  35788888888888776554432   23446


Q ss_pred             HHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC----CCcccHHHHHHHH
Q psy4949          99 RYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG----NGKVTVNDFMDTM  163 (275)
Q Consensus        99 r~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~----d~~Is~~eFl~~~  163 (275)
                      +.+|+.+ .|++|.|+..+|..+|+.+       |+.    .++..++.++..    +|.|+.+||++.+
T Consensus        80 ~~aF~~~D~d~~G~I~~~el~~~l~~~-------g~~----~~~~e~~~l~~~~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          80 LEGFRVFDKEGNGKVMGAELRHVLTTL-------GEK----MTEEEVETVLAGHEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHHHTTCTTSSSEEEHHHHHHHHHHS-------SSC----CCHHHHHHHHTTCCCTTSEEEHHHHHHHT
T ss_pred             HHhhhhccCCCCCeEeHHHHHHHHHHh-------CCC----CCHHHHHHHHhhCCCCCCeEeHHHHHHHh
Confidence            7889988 5889999999998877653       322    244555566553    5799999998864

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.19  E-value=6.3e-06  Score=65.58  Aligned_cols=95  Identities=12%  Similarity=0.098  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH----------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC
Q psy4949          28 VARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL----------------LNWLLSAYSVESLGRIRVFSIKVALATMCS   91 (275)
Q Consensus        28 ~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~----------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~   91 (275)
                      ..++......++..........+.++.+++...+                +..+|+.||.+++|.|+..||..++..+  
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~--  123 (174)
T d2scpa_          46 AKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--  123 (174)
T ss_dssp             HHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT--
T ss_pred             HHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH--
Confidence            3444444555555554444444566666654443                4458999999999999999999988754  


Q ss_pred             CChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          92 GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        92 G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      |-..+..+-+|..+ .|++|.|+..||..++++-
T Consensus       124 ~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_         124 GLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             TCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHH
Confidence            55577889999999 7999999999998887763

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.16  E-value=1.3e-05  Score=62.27  Aligned_cols=114  Identities=18%  Similarity=0.195  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHH---------HHHhhcC-CCCCccChHHHHHHH------------H
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLY---------HNLNKRL-PVSQQVHVEVLSGLL------------L   62 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY---------~~~~k~~-P~~~~v~~~~~~~l~------------~   62 (275)
                      +..+-++|+....+   .+..|+..++..++...-         ..+.... ...+.++.+.+...+            +
T Consensus         9 i~~l~~~F~~~D~d---~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (146)
T d1lkja_           9 IAEFKEAFALFDKD---NNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQEL   85 (146)
T ss_dssp             HHHHHHHHHHHCCS---SSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHH
Confidence            34445566665433   355677777666555321         1111111 111234444443332            2


Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYL  121 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L  121 (275)
                      ..+|+.||++++|.|+..+|+.+|..+-..-..+.++-+|+.+.|++|.|+..||..+|
T Consensus        86 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~dd~dG~I~~~eF~~~m  144 (146)
T d1lkja_          86 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAALL  144 (146)
T ss_dssp             HHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHCCSSSEEEHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhccCCCCeEeHHHHHHHh
Confidence            24799999999999999999999998877777777889999889999999999998776

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.13  E-value=1.2e-05  Score=62.71  Aligned_cols=103  Identities=13%  Similarity=0.206  Sum_probs=74.6

Q ss_pred             cchHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHH------------HHHHhh
Q psy4949           2 TIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLN------------WLLSAY   69 (275)
Q Consensus         2 lvd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~------------~lf~~f   69 (275)
                      .|+...+..+++..|.+.       +..++..++        ++.  .+.++.+++..++..            -+|++|
T Consensus        23 ~I~~~el~~~l~~lg~~~-------~~~el~~~~--------~~~--~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~~   85 (142)
T d1wdcb_          23 FVSKEDIKAISEQLGRAP-------DDKELTAML--------KEA--PGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMF   85 (142)
T ss_dssp             SCCHHHHHHHHHHHSSCC-------CHHHHHHHH--------TTS--SSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTT
T ss_pred             cCChHHHHHHHHHhhcCC-------CHHHHHHHH--------Hhc--cCccccccccccccccccccchhhhHHHhhhhh
Confidence            367778888888888764       334533332        121  246676666665543            369999


Q ss_pred             cCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          70 SVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        70 D~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      |.+++|+|+..+|+.+|..+...--++-+..+|+.+ .| +|.|+..+|..+|+
T Consensus        86 D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~  138 (142)
T d1wdcb_          86 DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK  138 (142)
T ss_dssp             CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred             cccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHh
Confidence            999999999999999998775444456678899988 45 69999999988876

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.11  E-value=2.1e-06  Score=60.70  Aligned_cols=64  Identities=17%  Similarity=0.358  Sum_probs=50.1

Q ss_pred             cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHH
Q psy4949          90 CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTM  163 (275)
Q Consensus        90 c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~  163 (275)
                      .+|..++.++.+|+.+ .|++|.|+..+|..+|+.+       |..+    ++..++.+|.     ++|.|+.+||+.++
T Consensus         3 ~~~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-------g~~~----~~~e~~~~~~~~D~d~dg~I~~~EF~~~m   71 (75)
T d1jc2a_           3 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-------GEHV----IEEDIEDLMKDSDKNNDGRIDFDEFLKMM   71 (75)
T ss_dssp             CCCCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-------SSCC----CHHHHHHHHHHHCSSSCSEECHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-------CCCc----cHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            3688899999999999 7999999999999888753       3322    3444555554     37899999999987


Q ss_pred             h
Q psy4949         164 M  164 (275)
Q Consensus       164 ~  164 (275)
                      .
T Consensus        72 ~   72 (75)
T d1jc2a_          72 E   72 (75)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=2e-05  Score=64.30  Aligned_cols=112  Identities=16%  Similarity=0.262  Sum_probs=78.3

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHH-------------HHHHHHHhhcCCCCCccChHHHHHH----------
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLL-------------SSLYHNLNKRLPVSQQVHVEVLSGL----------   60 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L-------------~~lY~~~~k~~P~~~~v~~~~~~~l----------   60 (275)
                      +|..+.+.|.+..     ++..++..++..++             ..||..+-++.  .|.|+.+++...          
T Consensus        26 Ei~~l~~~F~~~~-----~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~--~G~I~~~Ef~~~~~~~~~~~~~   98 (190)
T d1fpwa_          26 EIQQWHKGFLRDC-----PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDN--NGFIHFEEFITVLSTTSRGTLE   98 (190)
T ss_dssp             HHHHHHHHHHHHC-----TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSC--SSEECHHHHHHHHHHHSCCCST
T ss_pred             HHHHHHHHHHHHC-----CCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCC--CCcccHHHHHHHHHHHccCchH
Confidence            3455566674422     34567777765544             34555544442  356787765444          


Q ss_pred             -HHHHHHHhhcCCCCCeeehHHHHHHHHHhcC------------CChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          61 -LLNWLLSAYSVESLGRIRVFSIKVALATMCS------------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        61 -~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~------------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                       -+.++|+.||.|++|.|+..|+...+..+..            ..+++..+.+|+.+ .|++|.||.+||..+++
T Consensus        99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~  174 (190)
T d1fpwa_          99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK  174 (190)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence             2457999999999999999999999977643            23456678899999 79999999999976554

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.3e-06  Score=65.00  Aligned_cols=68  Identities=10%  Similarity=0.142  Sum_probs=42.5

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCC------CchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS------YTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~------~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      +|.+|++| .|+||.|++.||..+++.+...... .+.+...      ..+..++.+|..     ||.||.+||+.++.+
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYD-PKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSC-CSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcch-hhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            56778877 6778888888877777654322110 0111000      013456777775     799999999999865


Q ss_pred             C
Q psy4949         166 E  166 (275)
Q Consensus       166 d  166 (275)
                      +
T Consensus        97 ~   97 (99)
T d1snla_          97 K   97 (99)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.06  E-value=4.2e-05  Score=61.48  Aligned_cols=126  Identities=10%  Similarity=0.091  Sum_probs=79.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCC---------
Q psy4949          23 QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGK---------   93 (275)
Q Consensus        23 ~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~---------   93 (275)
                      +..|+..|+...+.....+   ..  +......+....+.+..++..|...+|.|++.++..++..+....         
T Consensus        28 dG~I~~~E~~~~~~~~~~~---~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~~~~~~~~~~~  102 (189)
T d1qv0a_          28 NGKITLDEIVSKASDDICA---KL--EATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEP  102 (189)
T ss_dssp             SSCBCHHHHHHHHHHTHHH---HT--TCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCcCcHHHHHHHHHHHHHH---Hc--CCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHHHHHHhhhccccccH
Confidence            5667777755444432211   10  011222344455666778888999999999999988876643322         


Q ss_pred             --hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          94 --LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        94 --l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                        ..+.++-+|..+ .|++|.|+++||..+++.+       |+.    .+++.++.+|..     ||.|+.+||+..+.
T Consensus       103 ~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~-------g~~----~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~  170 (189)
T d1qv0a_         103 TLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-------GIS----PSQEDCEATFRHCDLDNAGDLDVDEMTRQHL  170 (189)
T ss_dssp             CHHHHHHHHHHHHTC----CEECHHHHHHHHHHH-------SSC----CCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCcccchhhHHHHHhc-------CCC----CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence              222345689999 7999999999999888764       322    245566766653     68999999998664

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.04  E-value=7.8e-06  Score=64.59  Aligned_cols=108  Identities=10%  Similarity=0.134  Sum_probs=77.4

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHH---------------HHHHH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL---------------NWLLS   67 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~---------------~~lf~   67 (275)
                      |+...+..+++..+...       ...+    +..++..+....+  +.++..+....+.               .-+|+
T Consensus        37 Is~~el~~~l~~~~~~~-------~~~~----~~~~~~~~d~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~aF~  103 (162)
T d1topa_          37 ISTKELGTVMRMLGQNP-------TKEE----LDAIIEEVDEDGS--GTIDFEEFLVMMVRQMKEDAKGKSEEELANCFR  103 (162)
T ss_dssp             EEGGGHHHHHHHTTCCC-------CHHH----HHHHHHHHCTTSC--CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcHHHHHHHHhccCCch-------hHHH----HHhhhheeccCCC--CCeeeehhhhhhhhhhhhhcccCcHHHHHHHHH
Confidence            34455566666665442       3344    5566666654432  4555444332221               23699


Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .||.+++|.|+..+|+.+|.-+......+-+..+|..+ .|++|.|+..||..+|+-
T Consensus       104 ~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  160 (162)
T d1topa_         104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             HHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            99999999999999999999888788888889999999 799999999999888763

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.01  E-value=2.1e-05  Score=61.24  Aligned_cols=106  Identities=16%  Similarity=0.221  Sum_probs=71.6

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH-----------------HHHH
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL-----------------LNWL   65 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------------~~~l   65 (275)
                      |+...+..+++.-|++.       +..++..++...+    .... .+.++.+++..++                 +..+
T Consensus        19 I~~~el~~~l~~lg~~~-------s~~ei~~l~~~~~----~~~~-~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l~~~   86 (146)
T d1m45a_          19 IAKDSLGDYLRAIGYNP-------TNQLVQDIINADS----SLRD-ASSLTLDQITGLIEVNEKELDATTKAKTEDFVKA   86 (146)
T ss_dssp             EEGGGHHHHHHHTTCCC-------CHHHHHHHHHC------CC---CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHH
T ss_pred             CCHHHHHHHHHHcCCch-------hHHHHhhhhcccc----cccc-ccccccchhhhhhhhhcccccccccchHHHHHHH
Confidence            44556667777767553       4455444332211    2112 2456666666554                 3346


Q ss_pred             HHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHH
Q psy4949          66 LSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEY  120 (275)
Q Consensus        66 f~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~  120 (275)
                      |+.||.+++|.|+..+|..+|..+...-.++-+.-+|+.+ .|++|.|+..||...
T Consensus        87 F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~  142 (146)
T d1m45a_          87 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIED  142 (146)
T ss_dssp             HHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHH
T ss_pred             HHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHH
Confidence            9999999999999999999999775544456678899988 689999999998543

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.01  E-value=6.3e-06  Score=62.22  Aligned_cols=61  Identities=11%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC--CC-hhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS--GK-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~--G~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +.-+|+.||++++|+|+..+|+.+|.-+..  .+ .++.++.+|+.+ .|+||.|+.+||..+++
T Consensus        42 l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          42 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            346899999999999999999999877743  23 456789999999 69999999999988776

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.01  E-value=1.3e-05  Score=66.09  Aligned_cols=74  Identities=9%  Similarity=0.115  Sum_probs=56.5

Q ss_pred             CCccChHHHHHHHHH-----HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          49 SQQVHVEVLSGLLLN-----WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        49 ~~~v~~~~~~~l~~~-----~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      .|.++.+++..++..     .+|+.||+|++|+|+..|+..||..+-..-..+-...++..+.|++|.|+-.+|..++.
T Consensus        77 ~G~i~~~EF~~l~~~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~~~~  155 (188)
T d1qxpa2          77 NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLV  155 (188)
T ss_dssp             CCCCCSSSHHHHHHHHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHH
T ss_pred             CCcccHHHHHHHHhhhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHHHHH
Confidence            357887777655432     27999999999999999999999866433334445777777889999999998866554

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=5.7e-06  Score=61.27  Aligned_cols=60  Identities=7%  Similarity=0.038  Sum_probs=47.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhc----C------------CChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMC----S------------GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc----~------------G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ..+|+.||.|++|+|+..|++.++..+-    .            ..+++..+.+|+.+ .|+||.||.+||...++
T Consensus        19 r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~   95 (99)
T d1snla_          19 KTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   95 (99)
T ss_dssp             HHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            4689999999999999999999985432    1            11344567799999 79999999999976543

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=97.98  E-value=3.5e-06  Score=60.38  Aligned_cols=64  Identities=20%  Similarity=0.379  Sum_probs=49.4

Q ss_pred             cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          90 CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        90 c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      ..|..+++++.+|+.+ .|++|.|+..+|..+|+.       +|+.    .++..++.+|..     +|.|+.+||+..+
T Consensus         9 ~~~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~-------~g~~----~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m   77 (81)
T d1fi5a_           9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQA-------TGET----ITEDDIEELMKDGDKNNDGRIDYDEFLEFM   77 (81)
T ss_dssp             CCCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHT-------SSSC----CCHHHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh-------cCCC----CCHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            3577889999999999 799999999999888764       2332    234555555553     7899999999977


Q ss_pred             h
Q psy4949         164 M  164 (275)
Q Consensus       164 ~  164 (275)
                      .
T Consensus        78 ~   78 (81)
T d1fi5a_          78 K   78 (81)
T ss_dssp             S
T ss_pred             H
Confidence            4

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.97  E-value=7.4e-06  Score=64.58  Aligned_cols=63  Identities=17%  Similarity=0.220  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          59 GLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        59 ~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ...+..+|+.||.+++|.|+..||+.++..+  |-..+.++.+|..+ .|+||.|+.+||...+++
T Consensus       101 ~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~--~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~  164 (176)
T d1nyaa_         101 GPVVKGIVGMCDKNADGQINADEFAAWLTAL--GMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHHccCCChhhhHHHHHHHHHhc--CCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            3456679999999999999999999988765  56788899999999 799999999999776654

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.6e-05  Score=59.72  Aligned_cols=94  Identities=14%  Similarity=0.211  Sum_probs=72.8

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||++++|+|+..+|..++..+......+-..-++..+ .+++|.|+..++..++.....-..          ..
T Consensus         9 k~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~----------~~   78 (141)
T d2obha1           9 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKD----------TK   78 (141)
T ss_dssp             HHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHH----------HH
T ss_pred             HHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhc----------cH
Confidence            5789999999999999999999999887777777778888888 688999999999877765322111          12


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      ..+..+|..     +|.|+.++|..++..-
T Consensus        79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~  108 (141)
T d2obha1          79 EEILKAFKLFDDDETGKISFKNLKRVAKEL  108 (141)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            344555553     5899999999988753

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=97.94  E-value=2.5e-06  Score=59.26  Aligned_cols=60  Identities=12%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCC-hhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGK-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .-+|+.||++++|+|+..+++.+|..+-... ..+.++-+|+.+ .|+||.|+..||..+++
T Consensus         5 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           5 LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            3679999999999999999999998775543 567789999998 79999999999987764

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.93  E-value=3.2e-05  Score=63.34  Aligned_cols=111  Identities=14%  Similarity=0.211  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHH-------------HHHHHHhhcCCCCCccChHHHHHHH----------
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLS-------------SLYHNLNKRLPVSQQVHVEVLSGLL----------   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~-------------~lY~~~~k~~P~~~~v~~~~~~~l~----------   61 (275)
                      |..+.+.|..-     .++..|+..+...++.             .||..+-+.  ..+.|+.+++...+          
T Consensus        27 i~~l~~~F~~~-----~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~--~~G~I~f~EF~~~~~~~~~~~~~~   99 (201)
T d1omra_          27 LSSWYQSFLKE-----CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN--SDGTLDFKEYVIALHMTSAGKTNQ   99 (201)
T ss_dssp             HHHHHHHHHHH-----CTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSC--SSSEEEHHHHHHHHHHHHSSCGGG
T ss_pred             HHHHHHHHHHH-----CcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccC--CCCeEeehhHHHHHHhhcccchHH
Confidence            44555566322     2456788888766654             344444333  23568877776554          


Q ss_pred             -HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCC--------------hhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          62 -LNWLLSAYSVESLGRIRVFSIKVALATMCSGK--------------LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        62 -~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~--------------l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                       +.++|++||.|++|.|+..||...+..+....              +++....+|+.+ .|+||.||.+||...+.
T Consensus       100 ~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~  176 (201)
T d1omra_         100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL  176 (201)
T ss_dssp             SHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence             46899999999999999999998887665431              233456789999 79999999999866553

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=97.91  E-value=1.1e-05  Score=56.94  Aligned_cols=62  Identities=15%  Similarity=0.274  Sum_probs=47.9

Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ..++.++.+|+++ .|++|.|++.||..+|+.+       +.    ..++..++.+|..     +|.|+.+||+.++++
T Consensus         6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~----~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKEL-------GE----NLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH-------TC----CCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            4567899999999 6999999999999988864       22    1234455555543     689999999998864

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.90  E-value=3.3e-05  Score=61.99  Aligned_cols=87  Identities=15%  Similarity=0.263  Sum_probs=66.5

Q ss_pred             HHHHHHHHHhhcCCCCCccChHHHHHHH-----------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC-----------
Q psy4949          34 LLSSLYHNLNKRLPVSQQVHVEVLSGLL-----------LNWLLSAYSVESLGRIRVFSIKVALATMCS-----------   91 (275)
Q Consensus        34 ~L~~lY~~~~k~~P~~~~v~~~~~~~l~-----------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~-----------   91 (275)
                      +...+|..+.+..  .+.|+.+++...+           +.++|+.||.+++|.|+..|++..+..+..           
T Consensus        60 ~~~~lf~~~d~~~--~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~  137 (181)
T d1bjfa_          60 FAEHVFRTFDANG--DGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPED  137 (181)
T ss_dssp             HHHHHHHHHCSSC--SSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGG
T ss_pred             HHHHHHHhcCCCC--CCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcc
Confidence            3456777776653  2567766665443           346999999999999999999999987754           


Q ss_pred             -CChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          92 -GKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        92 -G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                       ...++..+.+|+.+ .|+||.||.+||..++.
T Consensus       138 ~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~  170 (181)
T d1bjfa_         138 ESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK  170 (181)
T ss_dssp             GSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence             33455678899999 79999999999877654

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=97.90  E-value=9.3e-05  Score=59.07  Aligned_cols=137  Identities=12%  Similarity=0.052  Sum_probs=91.3

Q ss_pred             HHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949           8 VIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus         8 ~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      +=++|+..-.+   .+..|+..|+...+..+...   ...  ......+....+....+...+....+.++..++..++.
T Consensus        14 ~k~~F~~~D~d---~dG~Is~~Ef~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (187)
T d1uhka1          14 HKHMFNFLDVN---HNGKISLDEMVYKASDIVIN---NLG--ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWK   85 (187)
T ss_dssp             HHHHHHHHCTT---CCSEEEHHHHHHHHHHHHHH---TSC--CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CCCcCcHHHHHHHHHHHHHH---Hhc--cCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHH
Confidence            34566665544   36789999977777655422   111  11222333455566677777888889999999987766


Q ss_pred             HhcCCCh-----------hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----
Q psy4949          88 TMCSGKL-----------MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----  150 (275)
Q Consensus        88 ~Lc~G~l-----------~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----  150 (275)
                      .+.....           .+.++.+|..+ .|++|.|+.+||..+|+.+       |.    ..+++.++.+|..     
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-------g~----~~~~~~~~~lf~~~D~d~  154 (187)
T d1uhka1          86 KLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA-------GI----IQSSEDCEETFRVCDIDE  154 (187)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------TS----CCSHHHHHHHHHHSCCCT
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHh-------CC----CccHHHHHHHHHHhCCCC
Confidence            6544332           23367899999 7999999999999888753       22    1235556666653     


Q ss_pred             CCcccHHHHHHHH
Q psy4949         151 NGKVTVNDFMDTM  163 (275)
Q Consensus       151 d~~Is~~eFl~~~  163 (275)
                      +|.|+.+||+.-+
T Consensus       155 dG~Is~~EF~~~~  167 (187)
T d1uhka1         155 SGQLDVDEMTRQH  167 (187)
T ss_dssp             TSCEEHHHHHHHH
T ss_pred             CCCEeHHHHHHHH
Confidence            6999999998744

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1.6e-05  Score=61.04  Aligned_cols=58  Identities=14%  Similarity=0.158  Sum_probs=50.2

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYL  121 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L  121 (275)
                      .+|++||.+++|.|++.+++.+|.-+.-...++-++.+++...|++|.|+..+|..+|
T Consensus        81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          81 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCTTSEEEHHHHHHHT
T ss_pred             HhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhhCCCCCCeEeHHHHHHHh
Confidence            4699999999999999999999998876677777888888778999999999986543

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=97.88  E-value=1.2e-05  Score=57.80  Aligned_cols=60  Identities=10%  Similarity=0.128  Sum_probs=53.2

Q ss_pred             HHHHHhhcCCC-CCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVES-LGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~-~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .-+|+.||+++ +|+|+..+++.+|..|--..-++.++-+|+-+ .|+||.|+.+||..++.
T Consensus        18 ~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~   79 (82)
T d1wrka1          18 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV   79 (82)
T ss_dssp             HHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred             HHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            35799999995 89999999999999888778888899999999 69999999999987764

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=7.7e-06  Score=60.32  Aligned_cols=60  Identities=13%  Similarity=0.096  Sum_probs=52.1

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.+|+|++|.|+..|++.++.-  .|-..+.++.+|+++ .|++|.|++.||...++-|
T Consensus        13 ~~~F~~~D~d~~G~is~~e~~~~l~~--~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~Li   73 (95)
T d1c07a_          13 DEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHT--TTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            57899999999999999999998853  466788899999999 6999999999998777643

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.87  E-value=6.6e-05  Score=58.77  Aligned_cols=59  Identities=14%  Similarity=0.115  Sum_probs=48.7

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-c--cCCCceeHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-C--DCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~--D~nG~i~~~el~~~L~  122 (275)
                      -+|+.||.+++|.|+..+++.+|..+...-.++-+..+++.+ .  |++|.|+-.+|...+.
T Consensus        86 ~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~  147 (152)
T d1wdcc_          86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM  147 (152)
T ss_dssp             HHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred             hhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence            479999999999999999999998876655566688888887 3  5679999999866553

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.6e-05  Score=59.94  Aligned_cols=113  Identities=17%  Similarity=0.201  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHH--------HHHHHHHHhhcCCCCCccChHHHHHH------------HHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETL--------LSSLYHNLNKRLPVSQQVHVEVLSGL------------LLNW   64 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~--------L~~lY~~~~k~~P~~~~v~~~~~~~l------------~~~~   64 (275)
                      |..+-++|+....+   .+..|+..|+..+        +..++..+-+..  .+.|+.+++...            .+..
T Consensus        15 i~~l~~~F~~~D~d---~~G~I~~~E~~~~~~~~~~~~~~~l~~~~d~~~--~g~i~~~EFl~~~~~~~~~~~~~~~~~~   89 (165)
T d1auib_          15 IKRLGKRFKKLDLD---NSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDG--NGEVDFKEFIEGVSQFSVKGDKEQKLRF   89 (165)
T ss_dssp             HHHHHHHHHHHCTT---CCSEECHHHHTTSHHHHTCTTHHHHHHHHCTTC--SSSEEHHHHHHHHGGGCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCC---CCCCCcHHHHHHhhhccCCHHHHHHHHHHcccc--chhhhhhhhhhhccccccchhhHHHHHH
Confidence            45566677776544   3567888886433        445666665542  356666665443            3456


Q ss_pred             HHHhhcCCCCCeeehHHHHHHHHHhcCCChhhH-----HHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDK-----LRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        65 lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dK-----lr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +|+.||.+++|.|+..+++..+....+-.+.+.     ++-+|..+ .|++|.||..||..+++
T Consensus        90 ~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~  153 (165)
T d1auib_          90 AFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG  153 (165)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHG
T ss_pred             HHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHh
Confidence            999999999999999999999987766555443     45677777 68899999999987776

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=97.83  E-value=1e-05  Score=58.70  Aligned_cols=56  Identities=16%  Similarity=0.186  Sum_probs=49.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFN  118 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~  118 (275)
                      .-+|+.||++++|.|++.+++.+|..+...-.++-++-+|+.+ .|++|.|+.+||.
T Consensus        26 ~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl   82 (87)
T d1s6ja_          26 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI   82 (87)
T ss_dssp             TTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHT
T ss_pred             HHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHH
Confidence            4679999999999999999999999876666677889999999 7999999999984

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=2e-05  Score=57.64  Aligned_cols=60  Identities=15%  Similarity=0.011  Sum_probs=52.2

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      ..-+|+.+|++++|+|+..+++.++.-+  |-..+.++.+|++. .|++|.|++.||...++-
T Consensus        11 y~~~F~~~D~d~~G~i~~~e~~~~l~~~--~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_          11 YVNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHTTTCCSTTCEEEHHHHHHHHHHH--SSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccchhHHHHHHHHHHc--cCCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence            3579999999999999999999998853  56678899999999 699999999999766653

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.83  E-value=0.0001  Score=59.42  Aligned_cols=116  Identities=12%  Similarity=0.202  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHH-----------HHHHHHHHhhcCCCCCccChHHHHHH------------H
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETL-----------LSSLYHNLNKRLPVSQQVHVEVLSGL------------L   61 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~-----------L~~lY~~~~k~~P~~~~v~~~~~~~l------------~   61 (275)
                      |..+.+.|+.-.-.. ..+..|+..++..+           ...||..+-++.  .+.|+.++++..            -
T Consensus        16 i~~L~~~F~~~d~~~-~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~--dg~I~f~EFl~~l~~~~~~~~~~~~   92 (183)
T d2zfda1          16 IEALYELFKKISSAV-IDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH--NGILGFEEFARALSVFHPNAPIDDK   92 (183)
T ss_dssp             HHHHHHHHHHHHTSS-SCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSC--SSSBCHHHHHHHHHHTSTTSCHHHH
T ss_pred             HHHHHHHHHHHCcCC-CCCCcCcHHHHHHHHHhcCCCCCHHHHHHHHHHccCC--CCcCcHHHHHHHHHhhhccCcHHHH
Confidence            445566665432211 12446777776543           356666665553  357776665443            2


Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcC--C-Ch-----hhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCS--G-KL-----MDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~--G-~l-----~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +.++|++||.|++|.|+..+++..+..+..  | .+     ++-.+-+|+.+ .|++|.|+.+||..++..
T Consensus        93 ~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  163 (183)
T d2zfda1          93 IHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR  163 (183)
T ss_dssp             HHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred             HHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            457999999999999999999888765431  2 22     22245689888 699999999999887653

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=6.5e-05  Score=60.76  Aligned_cols=85  Identities=13%  Similarity=0.276  Sum_probs=63.2

Q ss_pred             HHHHHHHhhcCCCCCccChHHHHHH-----------HHHHHHHhhcCCCCCeeehHHHHHHHHHhc------------CC
Q psy4949          36 SSLYHNLNKRLPVSQQVHVEVLSGL-----------LLNWLLSAYSVESLGRIRVFSIKVALATMC------------SG   92 (275)
Q Consensus        36 ~~lY~~~~k~~P~~~~v~~~~~~~l-----------~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc------------~G   92 (275)
                      ..||..+-+..  .+.|+.++++..           -+.++|+.||.|++|.|+..|+..++..+.            ..
T Consensus        63 ~~if~~~d~~~--dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~  140 (187)
T d1g8ia_          63 TFVFNVFDENK--DGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN  140 (187)
T ss_dssp             HHHHHHHCTTC--SSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGS
T ss_pred             HHHHHHhCcCC--CCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhc
Confidence            44666665542  257777665433           255799999999999999999998887542            13


Q ss_pred             ChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          93 KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        93 ~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .+++..+.+|+-+ .|+||.||.+||..++.
T Consensus       141 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~  171 (187)
T d1g8ia_         141 TPEKRVDRIFAMMDKNADGKLTLQEFQEGSK  171 (187)
T ss_dssp             SHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            3445678899999 69999999999987665

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=97.78  E-value=3.5e-05  Score=61.67  Aligned_cols=62  Identities=13%  Similarity=-0.005  Sum_probs=54.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      +.-+|++||.+++|.|+..||+.+|..+.-....+.+..+|..+ .|++|.|+.+||..++..
T Consensus       107 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  169 (187)
T d1uhka1         107 GDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  169 (187)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            45689999999999999999999999887666788899999999 799999999999766654

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=5.7e-05  Score=61.35  Aligned_cols=87  Identities=9%  Similarity=0.201  Sum_probs=63.6

Q ss_pred             HHHHHHHHhhcCCCCCccChHHHHHHH------------HHHHHHhhcCCCCCeeehHHHHHHHHHhcC---------CC
Q psy4949          35 LSSLYHNLNKRLPVSQQVHVEVLSGLL------------LNWLLSAYSVESLGRIRVFSIKVALATMCS---------GK   93 (275)
Q Consensus        35 L~~lY~~~~k~~P~~~~v~~~~~~~l~------------~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~---------G~   93 (275)
                      ...|+..+-+.- ..+.|+.++++..+            +.|+|++||.|++|.|+..++...+..+..         ..
T Consensus        59 ~~rif~~fd~~~-~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~  137 (180)
T d1xo5a_          59 KERICRVFSTSP-AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE  137 (180)
T ss_dssp             HHHHHHHHCCST-TCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTT
T ss_pred             HHHHHHhccCCC-CCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHH
Confidence            445676664431 12567766655442            447999999999999999999998887643         23


Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      +++-...+|+.+ .|++|.||.+||..++.
T Consensus       138 ~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~  167 (180)
T d1xo5a_         138 MKQLIDNILEESDIDRDGTINLSEFQHVIS  167 (180)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            344467799998 69999999999988765

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=97.74  E-value=3e-05  Score=61.78  Aligned_cols=63  Identities=6%  Similarity=0.046  Sum_probs=54.0

Q ss_pred             HHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          60 LLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        60 l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      ..+..+|+.||.+++|.|+..||+.++..  -|-..+-.+-+|+.+ .|++|.|+..|+..+++..
T Consensus       105 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~--~~l~~~~~~~~f~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         105 NRIPFLFKGMDVSGDGIVDLEEFQNYCKN--FQLQCADVPAVYNVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHCTTSSSCCCHHHHHHHTTS--SCCCCSSHHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCccCCHHHHHHHHHH--cCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence            34678999999999999999999998763  465667788999988 7999999999999888764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.70  E-value=5.5e-05  Score=58.62  Aligned_cols=103  Identities=15%  Similarity=0.212  Sum_probs=71.8

Q ss_pred             chHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH--------------HHHHHHh
Q psy4949           3 IDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL--------------LNWLLSA   68 (275)
Q Consensus         3 vd~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~--------------~~~lf~~   68 (275)
                      |+...+..+++..|++.       +..++..    +    .++.  .+.|+.+++..++              +.-+|+.
T Consensus        22 I~~~el~~~l~~lg~~~-------t~~ei~~----~----~~~~--~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~   84 (140)
T d1ggwa_          22 IPKTSIGDLLRACGQNP-------TLAEITE----I----ESTL--PAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQV   84 (140)
T ss_dssp             ECHHHHHHHHHHTSCCC-------CHHHHHH----H----HTTS--CSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHT
T ss_pred             ECHHHHHHHHHHHHhhh-------HHHhhhh----h----hccc--cccccchhhhhhhhhhhhcchhhHHHHHHHHHHH
Confidence            56677778888888764       3344322    2    1222  1355655555543              2347999


Q ss_pred             hcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhhccCCCceeHHHHHHHHH
Q psy4949          69 YSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        69 fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly~D~nG~i~~~el~~~L~  122 (275)
                      ||.+++|.|+..+|+.+|..+.-.--.+.+..+|+.+...+|.|+..+|..+|.
T Consensus        85 ~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~dG~I~y~eF~~~m~  138 (140)
T d1ggwa_          85 FDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDFVQMIL  138 (140)
T ss_dssp             TCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCSSCCSTTTHHHHHHH
T ss_pred             HhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCCCCEEeHHHHHHHHh
Confidence            999999999999999999877544445567889998843489999999977653

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=4.7e-05  Score=54.10  Aligned_cols=59  Identities=7%  Similarity=0.079  Sum_probs=52.0

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEY  120 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~  120 (275)
                      +.-+|..||.+++|.|+..+|+.+|.-++-.--++-++.+|+.+ .|++|.|+-.+|...
T Consensus        22 l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~   81 (83)
T d1wlza1          22 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR   81 (83)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHH
T ss_pred             HHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHH
Confidence            34679999999999999999999999987766677889999999 799999999998654

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=2.8e-05  Score=57.71  Aligned_cols=60  Identities=22%  Similarity=0.125  Sum_probs=52.9

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.+|.+++|+|+..+++.++.  ..|-..+.++.+|+++ .|++|.|+++||...++-|
T Consensus        14 ~~~F~~~D~d~~G~i~~~e~~~~l~--~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          14 EKYYRQVEAGNTGRVLALDAAAFLK--KSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHCCTTSSCCCSHHHHHHHH--TSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHH--HcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence            4789999999999999999999976  4678899999999999 6999999999998776643

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.68  E-value=4e-05  Score=51.59  Aligned_cols=55  Identities=20%  Similarity=0.401  Sum_probs=43.3

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHH
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMD  161 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~  161 (275)
                      |.++.+|+.+ .|++|+|++.+|..+|+.+       |.    ..++..+..+|..     +|.|+.+||++
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~-------g~----~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGL-------GE----KLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHT-------TC----CCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHc-------CC----CCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            4688999999 7999999999999888753       32    2246667777765     68999999985

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=97.67  E-value=2.9e-05  Score=56.97  Aligned_cols=70  Identities=11%  Similarity=0.127  Sum_probs=55.1

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhc-----CCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMC-----SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc-----~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .+.+++-+. .+|+.||.+ +|+|+..||+.+|..+.     ...-.+.++.+|+.+ .|+||.|+-+||..++..+.
T Consensus         4 lE~~ie~l~-~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~   79 (92)
T d1a4pa_           4 MEHAMETMM-FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   79 (92)
T ss_dssp             HHHHHHHHH-HHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            345555544 899999987 89999999999997643     334456788899988 79999999999988876653

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.64  E-value=9.5e-05  Score=59.86  Aligned_cols=91  Identities=12%  Similarity=0.133  Sum_probs=68.8

Q ss_pred             HHHHHhhcCC-CCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCc
Q psy4949          63 NWLLSAYSVE-SLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYT  140 (275)
Q Consensus        63 ~~lf~~fD~~-~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~  140 (275)
                      .-+++.|+++ ++|+|+..||+.+|..+-.....+-.+.+|+.+ .|++|.|+-.||...+.....           +..
T Consensus        24 ~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~-----------~~~   92 (189)
T d1jbaa_          24 QEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR-----------GTL   92 (189)
T ss_dssp             HHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSS-----------CCC
T ss_pred             HHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcc-----------cch
Confidence            4457777755 699999999999998665656666779999999 799999999999777764321           123


Q ss_pred             hHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         141 DTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       141 e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +..++.+|+.     +|.|+.+||...+.
T Consensus        93 ~~~~~~~F~~~D~d~~g~i~~~E~~~~~~  121 (189)
T d1jbaa_          93 EHKLKWTFKIYDKDRNGCIDRQELLDIVE  121 (189)
T ss_dssp             THHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhhhccCCCCcccHhHHHHHHH
Confidence            5566666663     68999999888663

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.63  E-value=3.2e-05  Score=52.70  Aligned_cols=57  Identities=23%  Similarity=0.398  Sum_probs=43.6

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHH
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDT  162 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~  162 (275)
                      ++.++-+|++| .|++|.|++.+|..+++.+       |..    .++..++.+|..     +|.|+.+||+..
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~l-------g~~----~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNL-------GEK----LTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TCC----CCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-------CCC----CCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            57899999999 6999999999998888753       322    234555555553     689999999973

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.58  E-value=4.9e-05  Score=51.99  Aligned_cols=57  Identities=18%  Similarity=0.330  Sum_probs=43.9

Q ss_pred             HHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        98 lr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      .|-+|+.+ .|++|.|++.||..+++.+       |.    ..++..++.+|..     +|.|+.+||+..+.+
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~l-------g~----~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAF-------SP----YFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHT-------CT----TSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHh-------cc----ccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            57899999 7999999999998888753       32    2245566666664     689999999998743

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=97.58  E-value=0.00014  Score=62.53  Aligned_cols=59  Identities=15%  Similarity=0.275  Sum_probs=37.7

Q ss_pred             HHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc--CCCcccHHHHHHHHh
Q psy4949          99 RYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS--GNGKVTVNDFMDTMM  164 (275)
Q Consensus        99 r~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~--~d~~Is~~eFl~~~~  164 (275)
                      ..+|..+ .|++|.|++.+|..+|..+ .+|....+     ......+. |.  +||.||.+||++.++
T Consensus       256 ~~~F~~~D~d~~G~Is~~E~~~~l~~~-~~~~~~~~-----~~~~l~~~-~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         256 RILYAFADFDKSGQLSKEEVQKVLEDA-HIPESARK-----KFEHQFSV-VDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHHTCSSSCSSEEHHHHHHHHHHT-TCCGGGCS-----THHHHHHH-HTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCcHHHHHHHHHHc-CCCcCcHH-----HHHHHHHH-hCCCCCCcCcHHHHHHHHH
Confidence            3468888 6999999999999888864 22110000     01122222 32  379999999999764

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.55  E-value=8.6e-05  Score=52.03  Aligned_cols=58  Identities=14%  Similarity=0.303  Sum_probs=45.1

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++-+|+.+ .|++|.|+..+|..+|+.+       |..    .++..+..+|..     +|.|+.+||+.++.
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSL-------GLS----PSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-------TCC----CCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHh-------CCC----CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4578899999 7999999999999888764       322    245566666654     68999999999773

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=8.6e-05  Score=54.55  Aligned_cols=68  Identities=21%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             cChHHHHHHHHHHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          52 VHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        52 v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      ++.++-.. + .-+|+.+| +++|+|+..+++..|.  ..|-..+-++.++++. .|++|.|++.||...++-+
T Consensus         4 ls~ee~~~-y-~~~F~~~D-~~~G~i~~~el~~~l~--~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~Li   72 (95)
T d2jxca1           4 VKPEDKAK-Y-DAIFDSLS-PVNGFLSGDKVKPVLL--NSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV   72 (95)
T ss_dssp             SCHHHHHH-H-HHHHHHTC-CBTTEEEHHHHHHHHT--TSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHH-H-HHHHHHhC-CCCCceeHHHHHHHHH--HcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            44444432 3 46899999 8999999999998875  3466677799999999 6999999999997766643

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=97.54  E-value=6.8e-06  Score=59.71  Aligned_cols=79  Identities=15%  Similarity=0.303  Sum_probs=56.5

Q ss_pred             CCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC
Q psy4949          72 ESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG  150 (275)
Q Consensus        72 ~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~  150 (275)
                      +.+|.|+..+..+| .-|+...+ ..++.+|..+ .|++|.|+..||..+|+.+       |..    .++..++.+|..
T Consensus         1 ~~~g~id~~~~~ma-~~l~~~~i-~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-------g~~----~s~~e~~~l~~~   67 (87)
T d1s6ja_           1 HSSGHIDDDDKHMA-ERLSEEEI-GGLKELFKMIDTDNSGTITFDELKDGLKRV-------GSE----LMESEIKDLMDA   67 (87)
T ss_dssp             CCSSSSSSHHHHSS-SSSCSSST-TTTTTHHHHHCTTCSSCEEHHHHHHHHHTT-------TSS----CCHHHHHHHHHH
T ss_pred             CCCCccCchHHHHH-hhCCHHHH-HHHHHHHHHHcCCCCCcCcHHHHHHHHHHc-------CCC----CCHHHHHHHHHH
Confidence            35788888887765 22444443 3489999999 7999999999998887653       322    245566666664


Q ss_pred             -----CCcccHHHHHHHH
Q psy4949         151 -----NGKVTVNDFMDTM  163 (275)
Q Consensus       151 -----d~~Is~~eFl~~~  163 (275)
                           +|.|+.+||+..+
T Consensus        68 ~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          68 ADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HCTTCSSEECHHHHTTCC
T ss_pred             cCCCCCCeEeHHHHHHHH
Confidence                 6899999999644

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.51  E-value=8.4e-05  Score=52.06  Aligned_cols=62  Identities=11%  Similarity=0.213  Sum_probs=49.5

Q ss_pred             HHHHHhhcCC--CCCeeehHHHHHHHHHhcCC-Ch-hhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYSVE--SLGRIRVFSIKVALATMCSG-KL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD~~--~~G~I~~~ef~~aLs~Lc~G-~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|..||.+  ++|+|+..|++.+|..+... +. .+-++.+|+.+ .|+||.|+-+||..+++.+
T Consensus         8 ~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           8 KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            4678999754  57999999999999987533 22 33578899998 7999999999998887754

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.50  E-value=6.5e-05  Score=53.42  Aligned_cols=58  Identities=14%  Similarity=0.300  Sum_probs=44.0

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..+ .|++|.|+..+|..+|+.+       |..    .++..++.+|..     +|.|+.+||+..+.
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~~----~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~   77 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRML-------GQN----PTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   77 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------TCC----CCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHc-------CCC----CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4589999999 6999999999999888753       322    234455555553     68999999999774

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=97.48  E-value=6.1e-05  Score=53.59  Aligned_cols=59  Identities=14%  Similarity=0.312  Sum_probs=44.9

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      ..++-+|+.| .|++|.|+..||..+|+.+       |.     .++..+..+|..     +|.|+.+||+.++.+.
T Consensus         6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~l-------g~-----~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           6 ADRERIFKRFDTNGDGKISSSELGDALKTL-------GS-----VTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHTT-------TT-----CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHh-------hc-----CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            4578899999 7999999999998887742       31     134455665553     6899999999998764

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.48  E-value=4.5e-05  Score=53.51  Aligned_cols=61  Identities=15%  Similarity=0.245  Sum_probs=42.5

Q ss_pred             hhHHHHhchhh-c-cC-CCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhc-----CCCcccHHHHHHHHh
Q psy4949          95 MDKLRYIFSQL-C-DC-NGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMM  164 (275)
Q Consensus        95 ~dKlr~~F~ly-~-D~-nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~-----~d~~Is~~eFl~~~~  164 (275)
                      .+.++-+|++| . |+ +|.|++.||..+|+.+       |+.++  ..+..++.+|.     ++|.|+.+||+.++.
T Consensus         4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~l-------g~~~~--~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~   72 (76)
T d1qx2a_           4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-------GPSLL--KGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK   72 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH-------GGGSC--TTSCSHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHh-------CCcCC--CCHHHHHHHHHHhhcCCCCcCcHHHHHHHHH
Confidence            57899999999 3 33 5999999999998875       22111  12223444443     379999999999764

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=97.48  E-value=0.00011  Score=53.34  Aligned_cols=76  Identities=9%  Similarity=0.103  Sum_probs=52.4

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .|..++++|...--+-. ....|+..||..+|+..+..+.+.     +.++ ..    ++-+++..|.|+||.|+|.||+
T Consensus         6 ai~~li~vF~kya~~~g-~~~~Lsk~Elk~ll~~e~~~~~~~-----~~~~-~~----v~~~~~~lD~n~Dg~idF~EF~   74 (87)
T d1e8aa_           6 HLEGIVNIFHQYSVRKG-HFDTLSKGELKQLLTKELANTIKN-----IKDK-AV----IDEIFQGLDANQDEQVDFQEFI   74 (87)
T ss_dssp             HHHHHHHHHHHHHTSSS-STTEECHHHHHHHHHHHSTTTSTT-----TTSH-HH----HHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHHHcccCC-CCCeEcHHHHHHHHHHHccccccC-----CCCH-HH----HHHHHHHHcCCCCCcCCHHHHH
Confidence            36788999976532221 234699999888887665444322     2232 33    4677889999999999999998


Q ss_pred             HHHHHhc
Q psy4949          84 VALATMC   90 (275)
Q Consensus        84 ~aLs~Lc   90 (275)
                      .-++.+.
T Consensus        75 ~li~~l~   81 (87)
T d1e8aa_          75 SLVAIAL   81 (87)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8777654

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=97.47  E-value=0.00022  Score=52.16  Aligned_cols=74  Identities=9%  Similarity=0.086  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.+++++|+..--+-. ....|+..|+..+|+..+..+.+.     .++.++     +.-+++.+|.|+||+|+|.||..
T Consensus         8 i~~l~~~F~~ya~~dg-~~~~L~~~Elk~~l~~~~~~~~~~-----~~~~~~-----~~~i~~~~D~n~DG~I~F~EF~~   76 (93)
T d3c1va1           8 LDVMVSTFHKYSGKEG-DKFKLNKSELKELLTRELPSFLGK-----RTDEAA-----FQKLMSNLDSNRDNEVDFQEYCV   76 (93)
T ss_dssp             HHHHHHHHHHHHTSSS-STTEECHHHHHHHHHHHCHHHHTT-----CCSHHH-----HHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             HHHHHHHHHHHccCCC-CCCeeCHHHHHHHHHHhchhcccc-----CCCHHH-----HHHHHHHHcCCCCCCCCHHHHHH
Confidence            5678889976421211 233599999999999888776653     234343     46778899999999999999988


Q ss_pred             HHHHh
Q psy4949          85 ALATM   89 (275)
Q Consensus        85 aLs~L   89 (275)
                      .+.-+
T Consensus        77 lm~~l   81 (93)
T d3c1va1          77 FLSCI   81 (93)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66544

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=97.47  E-value=1.5e-05  Score=55.17  Aligned_cols=61  Identities=25%  Similarity=0.391  Sum_probs=44.4

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHhc
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMMS  165 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~~  165 (275)
                      ++-++-+|++| .|++|.|+..+|..+|+.       +|+.+   .++..++.+|..     +|.|+.+||+.++.+
T Consensus         1 eeel~~~F~~~D~d~~G~I~~~el~~~l~~-------~g~~~---~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           1 EEEILRAFKVFDANGDGVIDFDEFKFIMQK-------VGEEP---LTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             CHHHHHHHHHHSCSGGGEECHHHHHHHSST-------TTTCC---CCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCCcCeEcHHHHHHHHHH-------hCCCC---CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            46689999999 699999999999776653       33321   145555555543     689999999998753

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=97.45  E-value=3.1e-05  Score=62.79  Aligned_cols=92  Identities=14%  Similarity=0.158  Sum_probs=67.7

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      .-+|+.||++++|.|+..+|..+|..+......+.++.+|+.+ .|++|.|+..++..+....       ...    ..+
T Consensus        13 ~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-------~~~----~~~   81 (182)
T d1s6ia_          13 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL-------NKL----ERE   81 (182)
T ss_dssp             HHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTS-------SSS----CCC
T ss_pred             HHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhh-------ccc----ccH
Confidence            4589999999999999999999999887777778889999999 7999999988875433221       111    112


Q ss_pred             HHHhhhhc---C--CCcccHHHHHHHHhc
Q psy4949         142 TLAQEIFS---G--NGKVTVNDFMDTMMS  165 (275)
Q Consensus       142 ~~v~~cF~---~--d~~Is~~eFl~~~~~  165 (275)
                      +.+..+|.   .  +|.|+.++|...+..
T Consensus        82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~  110 (182)
T d1s6ia_          82 ENLVSAFSYFDKDGSGYITLDEIQQACKD  110 (182)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHhhcCCCccchhhhhhhhhh
Confidence            22333343   2  578999998886643

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=97.44  E-value=0.00012  Score=53.52  Aligned_cols=71  Identities=7%  Similarity=0.100  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.+++++|+...   .+ +..|+.+++..+|...+..+.+.-+     +.+.     +.-++..+|.|+||+|+|.||..
T Consensus         8 ie~l~~~F~~yd---~d-dG~is~~El~~~l~~~~~~~~~~~~-----~~~~-----v~~~~~~~D~n~DG~I~F~EF~~   73 (92)
T d1a4pa_           8 METMMFTFHKFA---GD-KGYLTKEDLRVLMEKEFPGFLENQK-----DPLA-----VDKIMKDLDQCRDGKVGFQSFFS   73 (92)
T ss_dssp             HHHHHHHHHHHH---GG-GCSBCHHHHHHHHHHHCHHHHHHSC-----CTTH-----HHHHHHHHCTTSSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHc---CC-CCEEcHHHHHHHHHHhccccccccC-----CHHH-----HHHHHHHHhCCCCCCCcHHHHHH
Confidence            567788887764   22 4679999999999988877655422     2222     45678999999999999999977


Q ss_pred             HHHHh
Q psy4949          85 ALATM   89 (275)
Q Consensus        85 aLs~L   89 (275)
                      .+.-+
T Consensus        74 li~~l   78 (92)
T d1a4pa_          74 LIAGL   78 (92)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76544

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.40  E-value=0.00027  Score=56.28  Aligned_cols=89  Identities=16%  Similarity=0.169  Sum_probs=64.0

Q ss_pred             HHHhh-cCCCCCeeehHHHHHHHHHhcCCC-hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCch
Q psy4949          65 LLSAY-SVESLGRIRVFSIKVALATMCSGK-LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD  141 (275)
Q Consensus        65 lf~~f-D~~~~G~I~~~ef~~aLs~Lc~G~-l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e  141 (275)
                      +++.| |.+++|.|+..+|..+|..+.... ...-.+.+|+.+ .|++|.|+.+|+...+..+.+-           ..+
T Consensus        18 l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~-----------~~~   86 (178)
T d1s6ca_          18 LYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG-----------TVH   86 (178)
T ss_dssp             HHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHC-----------CHH
T ss_pred             HHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhcc-----------chH
Confidence            34455 567899999999999999887654 444448899999 6999999999997766543221           124


Q ss_pred             HHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949         142 TLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus       142 ~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      ..++.+|..     +|.|+.+||...+.
T Consensus        87 ~~~~~~f~~~D~~~~g~i~~~e~~~~~~  114 (178)
T d1s6ca_          87 EKLRWTFNLYDINKDGYINKEEMMDIVK  114 (178)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCeecHHHHHHHHH
Confidence            455555543     68999999877653

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=97.40  E-value=0.00029  Score=51.28  Aligned_cols=70  Identities=20%  Similarity=0.136  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHhh-cCCCC-CeeehHHHHHHHHHhcCC-----ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAY-SVESL-GRIRVFSIKVALATMCSG-----KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        55 ~~~~~l~~~~lf~~f-D~~~~-G~I~~~ef~~aLs~Lc~G-----~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +.+++-+. -+|..| |.+++ |+|+..||+.+|.-+...     .-.+.++-+|+.+ .|+||.|+..||..++..+.
T Consensus         5 E~~i~~l~-~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           5 ETAMETLI-NVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHH-HHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            44544444 566666 78875 999999999999876532     2356778899999 79999999999988887653

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=9e-05  Score=56.00  Aligned_cols=59  Identities=19%  Similarity=0.160  Sum_probs=50.3

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      .-+|+.+|++++|+|+..+++..|.  -.|-..+.++.++.+. .|++|.|++.||...++-
T Consensus        25 ~~lF~~~D~d~~G~Is~~e~~~~l~--~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          25 VNQFRSLQPDPSSFISGSVAKNFFT--KSKLSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHCC--SSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCcccchhHHHHHHHHH--hhccchHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence            5789999999999999999888763  3466678899999999 699999999999876663

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.39  E-value=0.00037  Score=53.87  Aligned_cols=60  Identities=10%  Similarity=0.077  Sum_probs=49.4

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .-+|++||.+++|.|++.+|+..|..+..---.+-+.-+|+.+ .|++|.|+-.+|..+|.
T Consensus        80 ~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~  140 (145)
T d2mysb_          80 MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT  140 (145)
T ss_pred             HHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            3479999999999999999999987654333456678899988 68999999999977764

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=97.38  E-value=0.0006  Score=49.74  Aligned_cols=71  Identities=11%  Similarity=0.097  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHhh-cCCCC-CeeehHHHHHHHHHh-----cCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          55 EVLSGLLLNWLLSAY-SVESL-GRIRVFSIKVALATM-----CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        55 ~~~~~l~~~~lf~~f-D~~~~-G~I~~~ef~~aLs~L-----c~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +.+++.+. -+|..| |++++ |+|+..||+..|...     .....++-++.+|+.+ .|+||.|+..||..++..+..
T Consensus         5 E~~i~~l~-~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~~   83 (93)
T d3c1va1           5 EKALDVMV-STFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAM   83 (93)
T ss_dssp             HHHHHHHH-HHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            44544433 788888 56665 489999999999763     3445566679999999 799999999999988877644

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.37  E-value=7.4e-05  Score=52.92  Aligned_cols=65  Identities=17%  Similarity=0.329  Sum_probs=44.6

Q ss_pred             CCChhhHHHHhchhhc--cC-CCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHH
Q psy4949          91 SGKLMDKLRYIFSQLC--DC-NGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDT  162 (275)
Q Consensus        91 ~G~l~dKlr~~F~ly~--D~-nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~  162 (275)
                      ..+-.++++.+|..|+  |+ +|.|++.||..+|+..+  |.       +..++..++.+|..     ||.|+.+||+..
T Consensus         2 ~e~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~--~~-------~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l   72 (78)
T d1cb1a_           2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEF--PS-------LLKGPRTLDDLFQELDKNGDGEVSFEEFQVL   72 (78)
T ss_dssp             CSCCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHC--SS-------CCSSCCCSSHHHHHTCCCSSSSEEHHHHHHH
T ss_pred             chhhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHc--CC-------CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHH
Confidence            3456788999999995  34 48999999999998751  11       11122234444442     689999999987


Q ss_pred             Hh
Q psy4949         163 MM  164 (275)
Q Consensus       163 ~~  164 (275)
                      +.
T Consensus        73 ~~   74 (78)
T d1cb1a_          73 VK   74 (78)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=97.36  E-value=7.4e-05  Score=51.95  Aligned_cols=58  Identities=17%  Similarity=0.365  Sum_probs=44.3

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.+|.+|..+ .|++|.|+..+|...|+.+       |.    ..++..+..+|..     +|.|+.+||+.++.
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------g~----~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-------GQ----NPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHT-------TC----CCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHh-------CC----CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            4689999999 6999999999998888753       32    2245556665553     68999999999763

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=97.28  E-value=0.00021  Score=51.98  Aligned_cols=74  Identities=14%  Similarity=0.227  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           5 IWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         5 ~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      |.+++++|+.. .-..  ....|+..||..+|..+.....+     ...+.+..     .-+++.+|.|++|+|+|.||.
T Consensus         8 i~~l~~~F~~y~d~dg--~~G~is~~El~~~L~~~~~~~~~-----~~~~~~~~-----~~~~~~~D~d~dG~Idf~EF~   75 (93)
T d1zfsa1           8 METLINVFHAHSGKEG--DKYKLSKKELKDLLQTELSSFLD-----VQKDADAV-----DKIMKELDENGDGEVDFQEFV   75 (93)
T ss_dssp             HHHHHHHHHHHGGGSS--CCSSEEHHHHHHHHHHHSTTTSC-----CSSCHHHH-----HHHHHHHTTTCCSEECSHHHH
T ss_pred             HHHHHHHHHHHcccCC--CCCEecHHHHHHHHHHhcccccc-----cCCCHHHH-----HHHHHHHcCCCCCCCcHHHHH
Confidence            56788888765 3221  13479999977777665533222     22343333     457899999999999999998


Q ss_pred             HHHHHhc
Q psy4949          84 VALATMC   90 (275)
Q Consensus        84 ~aLs~Lc   90 (275)
                      ..++-|.
T Consensus        76 ~lm~~l~   82 (93)
T d1zfsa1          76 VLVAALT   82 (93)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7765443

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=97.23  E-value=0.00033  Score=51.15  Aligned_cols=75  Identities=7%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .|.++|++|...--+..+ ...|+..++..+|+.=+..+.+.     +.+ +..    +.-++...|.|+||.|+|.||.
T Consensus         7 ai~~ii~vFhkYa~~~G~-~~tLsk~Elk~Ll~~El~~~l~~-----~~d-~~~----~d~~m~~LD~n~Dg~vdF~EF~   75 (90)
T d3cr5x1           7 AVVALIDVFHQYSGREGD-KHKLKKSELKELINNELSHFLEE-----IKE-QEV----VDKVMETLDSDGDGECDFQEFM   75 (90)
T ss_dssp             HHHHHHHHHHHHHTSSSS-TTSBCHHHHHHHHHHHCTTTSCC-----CCS-HHH----HHHHHHHHCTTSSSSBCHHHHH
T ss_pred             HHHHHHHHHHHHhccCCC-cCcCCHHHHHHHHHHHHHHHhcC-----CCC-HHH----HHHHHHHhcCCCCCcCCHHHHH
Confidence            367899999876444332 35799999666665433222221     112 333    5677888999999999999996


Q ss_pred             HHHHHh
Q psy4949          84 VALATM   89 (275)
Q Consensus        84 ~aLs~L   89 (275)
                      .-++.|
T Consensus        76 ~li~~l   81 (90)
T d3cr5x1          76 AFVAMI   81 (90)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            655544

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=97.11  E-value=0.0016  Score=47.42  Aligned_cols=72  Identities=10%  Similarity=-0.019  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHhh-cCCCCC-eeehHHHHHHHHHhcCCC-----hhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHh
Q psy4949          55 EVLSGLLLNWLLSAY-SVESLG-RIRVFSIKVALATMCSGK-----LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLA  126 (275)
Q Consensus        55 ~~~~~l~~~~lf~~f-D~~~~G-~I~~~ef~~aLs~Lc~G~-----l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~  126 (275)
                      +.++..+. -+|+-| |++++| +|+..||+..|......-     -.+.++-+++.. .|+||.|+-+||-.++..+..
T Consensus         5 E~~i~~i~-~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~~   83 (93)
T d1ksoa_           5 EQAVAAIV-CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCL   83 (93)
T ss_dssp             HHHHHHHH-HHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHH
Confidence            44544444 567776 899999 699999999997765432     245678899988 799999999999998887654


Q ss_pred             c
Q psy4949         127 I  127 (275)
Q Consensus       127 i  127 (275)
                      +
T Consensus        84 ~   84 (93)
T d1ksoa_          84 Y   84 (93)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=97.08  E-value=0.00034  Score=51.23  Aligned_cols=73  Identities=12%  Similarity=0.101  Sum_probs=49.4

Q ss_pred             hHHHHHHHHHHcCCCCcCCCC-CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQS-DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~-~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      .|..++++|+..--...  +. .|+..++..+|+..+..+.+     .+.+.+.     +.-++...|.|+||+|+|.||
T Consensus         7 ~i~~i~~vF~kya~~dG--d~~~ls~~Elk~ll~~~~~~~~~-----~~~~~~~-----~~~~~~~lD~n~Dg~IdF~EF   74 (93)
T d1ksoa_           7 AVAAIVCTFQEYAGRCG--DKYKLCQAELKELLQKELATWTP-----TEFRECD-----YNKFMSVLDTNKDCEVDFVEY   74 (93)
T ss_dssp             HHHHHHHHHHHHHTSSS--CTTCEEHHHHHHHHHHHTTTCCC-----CTTCHHH-----HHHHHHHHHHTTTCEECHHHH
T ss_pred             HHHHHHHHHHHHcCcCC--CCCeECHHHHHHHHHHhhhcccc-----cCCCHHH-----HHHHHHHHcCCCCCCCcHHHH
Confidence            36778999987622322  33 69999988888876644321     1234333     456778899999999999999


Q ss_pred             HHHHHH
Q psy4949          83 KVALAT   88 (275)
Q Consensus        83 ~~aLs~   88 (275)
                      +.-++-
T Consensus        75 ~~l~~~   80 (93)
T d1ksoa_          75 VRSLAC   80 (93)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            654443

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=97.08  E-value=0.00095  Score=49.07  Aligned_cols=71  Identities=10%  Similarity=0.033  Sum_probs=52.8

Q ss_pred             hHHHHHHHHHHHHHhh-cCCCC-CeeehHHHHHHHHHhcCCC-hhh-HHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          54 VEVLSGLLLNWLLSAY-SVESL-GRIRVFSIKVALATMCSGK-LMD-KLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        54 ~~~~~~l~~~~lf~~f-D~~~~-G~I~~~ef~~aLs~Lc~G~-l~d-Klr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      .+.+.+-+. -+|+.| |.+++ |+|+..||+..|.-+..+. ..+ .+..+|+.. .|+||.|+-.||..++..+.
T Consensus         9 lE~~i~~l~-~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~   84 (98)
T d1yuta1           9 LEESIETVV-TTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   84 (98)
T ss_dssp             HHHHHHHHH-HHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            344444333 566666 67774 9999999999998776553 333 478999999 79999999999988886653

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=97.00  E-value=0.00026  Score=52.30  Aligned_cols=74  Identities=11%  Similarity=0.135  Sum_probs=53.3

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .|..++++|+..-    +.+..|+..|+..+|+..+..+.+.+.   ..+.. .    ++-+++.+|.|+||+|+|.||+
T Consensus         8 ~i~~l~~~F~~y~----~~dG~i~~~El~~ll~~~~~~~~~~~~---~~~~~-~----v~~~~~~~D~n~DG~I~F~EF~   75 (100)
T d1psra_           8 SIIGMIDMFHKYT----RRDDKIDKPSLLTMMKENFPNFLSACD---KKGTN-Y----LADVFEKKDKNEDKKIDFSEFL   75 (100)
T ss_dssp             HHHHHHHHHHHTC----CTTSCBCHHHHHHHHHHHCHHHHHHHH---HTTCC-G----GGTHHHHHCTTCSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHc----CCCCcccHHHHHHHHHHHccccccccc---cCCHH-H----HHHHHHHhcCCCCCcCcHHHHH
Confidence            3667889998864    124689999999999988877643210   01111 1    3567899999999999999999


Q ss_pred             HHHHHh
Q psy4949          84 VALATM   89 (275)
Q Consensus        84 ~aLs~L   89 (275)
                      ..+.-|
T Consensus        76 ~li~~l   81 (100)
T d1psra_          76 SLLGDI   81 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888754

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=96.96  E-value=0.0008  Score=47.76  Aligned_cols=58  Identities=17%  Similarity=0.388  Sum_probs=43.5

Q ss_pred             hHHHHhchhh-ccC-CCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          96 DKLRYIFSQL-CDC-NGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        96 dKlr~~F~ly-~D~-nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +.++.+|..| .|+ ||.|+..+|...|+.       +|..+    ++..++.+|..     +|.|+.+||+..+.
T Consensus        15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~-------lg~~~----t~~el~~~i~~~D~d~~G~I~f~eFl~im~   79 (82)
T d1wrka1          15 NEFKAAFDIFVLGAEDGSISTKELGKVMRM-------LGQNP----TPEELQEMIDEVDEDGSGTVDFDEFLVMMV   79 (82)
T ss_dssp             HHHHHHHHHHTTTCTTSSBCHHHHHHHHHH-------TTCCC----CHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCeEeHHHHHHHHHH-------cCCCC----CHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            5678899999 575 799999999888875       34332    35556665554     68999999999764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.0011  Score=46.69  Aligned_cols=57  Identities=12%  Similarity=0.223  Sum_probs=43.9

Q ss_pred             hHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          96 DKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        96 dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      ..++.+|+.+ .|++|.|++.||..+|+.+ .+          .-+++.++.+|..     +|.|+..||+..+
T Consensus        20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~-~~----------~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          20 HAITQEFENFDTMKTNTISREEFRAICNRR-VQ----------ILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-TC----------CCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCceEChhHHHHHHHHh-CC----------CCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4578899999 6999999999999999864 22          1245666666664     6899999999854

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.92  E-value=0.00056  Score=48.15  Aligned_cols=62  Identities=15%  Similarity=0.255  Sum_probs=48.7

Q ss_pred             HHHHHhhcC-C-CCCeeehHHHHHHHHHhcCCCh--hhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          63 NWLLSAYSV-E-SLGRIRVFSIKVALATMCSGKL--MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        63 ~~lf~~fD~-~-~~G~I~~~ef~~aLs~Lc~G~l--~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      .-+|+.||. + ++|+|+..||+.+|.-++.+..  .+.++.+|+.. .|+||.|+-.||..++..+
T Consensus        10 ~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_          10 KSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            368899975 3 4589999999999988876532  33467788888 6999999999998887654

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=96.89  E-value=0.0017  Score=46.57  Aligned_cols=74  Identities=11%  Similarity=0.143  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHHH
Q psy4949           5 IWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKV   84 (275)
Q Consensus         5 ~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~~   84 (275)
                      |.++|.+|...--.-. ....|+..|+..+|.       +++|. ..-+.... .-.+.-++...|.|+||.|+|.||..
T Consensus         9 i~~ii~vFhkYa~~~G-~~~tLsk~Elk~Ll~-------~El~~-~l~~~~~d-~~~vd~~m~~LD~n~Dg~vdF~EF~~   78 (83)
T d1xk4c1           9 IETIINTFHQYSVKLG-HPDTLNQGEFKELVR-------KDLQN-FLKKENKN-EKVIEHIMEDLDTNADKQLSFEEFIM   78 (83)
T ss_dssp             HHHHHHHHHHHHTTSS-STTSBCHHHHHHHHH-------HHTTT-TTTTGGGC-HHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHHHHHHHHhCcCC-CcccCCHHHHHHHHH-------HHhHH-HhcCCCCC-HHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence            6788999987754433 346899999666665       35554 11111101 12356788999999999999999998


Q ss_pred             HHHH
Q psy4949          85 ALAT   88 (275)
Q Consensus        85 aLs~   88 (275)
                      -+.-
T Consensus        79 li~~   82 (83)
T d1xk4c1          79 LMAR   82 (83)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            7764

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=96.88  E-value=0.0009  Score=49.23  Aligned_cols=74  Identities=11%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .|.++|++|...--.-.+ ...|+..|+..+|+.=+-.+.+. +    -|++ .    ++-++...|.|+||.|+|.||.
T Consensus         7 ai~~ii~vFhkYa~~~G~-~~tLsk~Elk~Ll~~El~~~l~~-~----~d~~-~----vd~im~~LD~n~Dg~vdF~EF~   75 (95)
T d1qlsa_           7 CIESLIAIFQKHAGRDGN-NTKISKTEFLIFMNTELAAFTQN-Q----KDPG-V----LDRMMKKLDLDSDGQLDFQEFL   75 (95)
T ss_dssp             HHHHHHHHHHHHHTTSSC-TTCBCHHHHHHHHTTTSHHHHHH-C----CCTH-H----HHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCC-cCcCCHHHHHHHHHHHHHHHhcC-C----CCHH-H----HHHHHHHhcCCCCCcCcHHHHH
Confidence            467899999775444332 35799999888887655555443 1    1322 2    4677888999999999999995


Q ss_pred             HHHHH
Q psy4949          84 VALAT   88 (275)
Q Consensus        84 ~aLs~   88 (275)
                      .-++-
T Consensus        76 ~li~~   80 (95)
T d1qlsa_          76 NLIGG   80 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54443

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=96.87  E-value=0.0012  Score=48.50  Aligned_cols=73  Identities=15%  Similarity=0.181  Sum_probs=49.4

Q ss_pred             hHHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           4 DIWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         4 d~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      .|..++++|+.. +-..  ....|+..+|..+|...+...        ..+.+.     +.-+++..|.|+||.|+|.||
T Consensus        12 ~i~~l~~vF~~y~d~dg--~~g~is~~El~~~l~~~~~~~--------~~~~~~-----v~~l~~~~D~d~DG~IdF~EF   76 (98)
T d1yuta1          12 SIETVVTTFFTFARQEG--RKDSLSVNEFKELVTQQLPHL--------LKDVGS-----LDEKMKSLDVNQDSELKFNEY   76 (98)
T ss_dssp             HHHHHHHHHHHHHTTSS--SSSCBCHHHHHHHHHHHCTTT--------TCCSSC-----HHHHHHHHCTTCCSCBCHHHH
T ss_pred             HHHHHHHHHHHHcccCC--CCCEEcHHHHHHHHHHhcccc--------CCCHHH-----HHHHHHHhcCCCCCcCCHHHH
Confidence            366788899765 2111  235799999777666543211        122222     356778899999999999999


Q ss_pred             HHHHHHhcC
Q psy4949          83 KVALATMCS   91 (275)
Q Consensus        83 ~~aLs~Lc~   91 (275)
                      ...++-+..
T Consensus        77 ~~l~~~l~~   85 (98)
T d1yuta1          77 WRLIGELAK   85 (98)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            998886644

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=96.82  E-value=0.00076  Score=57.60  Aligned_cols=59  Identities=15%  Similarity=0.110  Sum_probs=51.0

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHHHhcCC-ChhhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALATMCSG-KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs~Lc~G-~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      .+|+.+|.+++|.|+..+|+.+|..+... ...+.+..+|..+ .|++|.|+..||..+|-
T Consensus       257 ~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            36999999999999999999999877653 4467789999999 79999999999988774

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00033  Score=56.25  Aligned_cols=84  Identities=11%  Similarity=0.101  Sum_probs=60.1

Q ss_pred             hhcCCCCCeeehHHHHHHHHHhcCCCh---hhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHH
Q psy4949          68 AYSVESLGRIRVFSIKVALATMCSGKL---MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTL  143 (275)
Q Consensus        68 ~fD~~~~G~I~~~ef~~aLs~Lc~G~l---~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~  143 (275)
                      .+|.|++|+|++.|+..++..+- ..+   .+.+..+|+.. .+++|.|+-++|..+++.+..              ++.
T Consensus        15 ~~d~n~dG~Is~~el~k~l~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~--------------r~e   79 (170)
T d2zkmx1          15 KMQLNSEGKIPVKNFFQMFPADR-KRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP--------------RPE   79 (170)
T ss_dssp             HHSCCTTSCEEHHHHHHHSCSCH-HHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC--------------CHH
T ss_pred             hcccCCCCCCcHHHHHHHHHHhh-hhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC--------------HHH
Confidence            48999999999999988884221 122   23445677777 688999999999988876521              245


Q ss_pred             HhhhhcC-----CCcccHHHHHHHHhcC
Q psy4949         144 AQEIFSG-----NGKVTVNDFMDTMMSE  166 (275)
Q Consensus       144 v~~cF~~-----d~~Is~~eFl~~~~~d  166 (275)
                      +..+|..     ++.||.+||.+.+...
T Consensus        80 i~~~F~~~d~d~~~~it~~el~~fL~~~  107 (170)
T d2zkmx1          80 IDEIFTSYHAKAKPYMTKEHLTKFINQK  107 (170)
T ss_dssp             HHTTCC--------CCCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHH
Confidence            6677765     4679999999988654

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=96.74  E-value=0.0011  Score=48.68  Aligned_cols=73  Identities=12%  Similarity=0.138  Sum_probs=48.9

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCC--CccChHHHHHHHHHHHHHhhcCCCCCeeehHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVS--QQVHVEVLSGLLLNWLLSAYSVESLGRIRVFS   81 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~--~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~e   81 (275)
                      .|.++|++|...--...+. ..|+..|+..+|+.       ++|+-  .+-|+ .+    ++-+++..|.|+||.|+|.|
T Consensus         7 ai~~ii~vFhkYa~~~g~~-~tLsk~Elk~Ll~~-------El~~~l~~~~d~-~~----vd~~m~~LD~n~Dg~vdF~E   73 (94)
T d1j55a_           7 AMGMIIDVFSRYSGSEGST-QTLTKGELKVLMEK-------ELPGFLQSGKDK-DA----VDKLLKDLDANGDAQVDFSE   73 (94)
T ss_dssp             HHHHHHHHHHHHTTSSSCT-TEECHHHHHHHHHH-------HSTTCC-------CH----HHHHHHHHCSSSSSSEEHHH
T ss_pred             HHHHHHHHHHHHcccCCCc-ccCCHHHHHHHHHH-------HHHHHhcCCCCH-HH----HHHHHHHhcCCCCCcCCHHH
Confidence            3678999998875554433 56999997666654       44431  01122 23    46677889999999999999


Q ss_pred             HHHHHHHh
Q psy4949          82 IKVALATM   89 (275)
Q Consensus        82 f~~aLs~L   89 (275)
                      |..-++.|
T Consensus        74 F~~li~~l   81 (94)
T d1j55a_          74 FIVFVAAI   81 (94)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            97766543

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.002  Score=46.74  Aligned_cols=27  Identities=15%  Similarity=0.209  Sum_probs=24.3

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHH
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALAT   88 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~   88 (275)
                      +..+++.+|.|++|+|++.||.+|+.+
T Consensus        46 l~~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_          46 LAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            457899999999999999999999864

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=96.70  E-value=0.0017  Score=46.89  Aligned_cols=72  Identities=10%  Similarity=0.147  Sum_probs=48.6

Q ss_pred             hHHHHHHHHHHc-CCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHH
Q psy4949           4 DIWNVIEAFREN-GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSI   82 (275)
Q Consensus         4 d~~~~~e~f~~~-~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef   82 (275)
                      .|..++++|... +-..  ....|+..++..++..-+       |.+...+.+.     +.-+++-.|.|+||+|+|.||
T Consensus         7 ai~~ii~vF~kya~~dg--~~~~ls~~Elk~Ll~~e~-------~~~~~~~~~~-----~~~~~~~lD~d~Dg~IdF~EF   72 (89)
T d1k8ua_           7 AIGLLVAIFHKYSGREG--DKHTLSKKELKELIQKEL-------TIGSKLQDAE-----IARLMEDLDRNKDQEVNFQEY   72 (89)
T ss_dssp             HHHHHHHHHHHHHTSSS--CTTEEEHHHHHHHHHHHS-------CCGGGTTSHH-----HHHHHHHHHHTTTCEEEHHHH
T ss_pred             HHHHHHHHHHHHcccCC--CCCeecHHHHHHHHHHHH-------HhhccCCHHH-----HHHHHHHhcCCCCCCCcHHHH
Confidence            367789999776 3221  223699999777777543       4322333333     356778899999999999999


Q ss_pred             HHHHHHh
Q psy4949          83 KVALATM   89 (275)
Q Consensus        83 ~~aLs~L   89 (275)
                      +..+.-+
T Consensus        73 ~~l~~~l   79 (89)
T d1k8ua_          73 VTFLGAL   79 (89)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8766544

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.0019  Score=46.47  Aligned_cols=29  Identities=10%  Similarity=0.129  Sum_probs=25.5

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC   90 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc   90 (275)
                      +..+++.+|.|++|+|++.||.+|+-++.
T Consensus        45 l~~i~~~~D~d~dG~l~~~EF~~a~~li~   73 (92)
T d1fi6a_          45 LSHIWELSDFDKDGALTLDEFCAAFHLVV   73 (92)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeecHHHHHHHHHHHH
Confidence            45789999999999999999999887654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=96.59  E-value=0.00026  Score=42.22  Aligned_cols=28  Identities=21%  Similarity=0.329  Sum_probs=19.0

Q ss_pred             hhHHHHhchhh-ccCCCceeHHHHHHHHH
Q psy4949          95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQ  122 (275)
Q Consensus        95 ~dKlr~~F~ly-~D~nG~i~~~el~~~L~  122 (275)
                      ++.++-+|+++ .|+||.|+..||..+|+
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~   30 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMT   30 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            45677777777 57777777777765543

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=96.52  E-value=0.0013  Score=48.30  Aligned_cols=63  Identities=6%  Similarity=0.172  Sum_probs=42.3

Q ss_pred             HHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHHh
Q psy4949          98 LRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTMM  164 (275)
Q Consensus        98 lr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~~  164 (275)
                      +..+|..|++++|.|++.||..+|+....-.....+..    ++..++.+|..     ||.|+.+||+..+.
T Consensus        12 l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~~~~~~~~----~~~~v~~~~~~~D~n~DG~I~F~EF~~li~   79 (100)
T d1psra_          12 MIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKK----GTNYLADVFEKKDKNEDKKIDFSEFLSLLG   79 (100)
T ss_dssp             HHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHT----TCCGGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCcccHHHHHHHHHHHccccccccccC----CHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            45677778899999999999999986422111000100    12356666654     79999999999764

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=96.30  E-value=0.0086  Score=43.00  Aligned_cols=70  Identities=11%  Similarity=0.130  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHhh-cCCCCC-eeehHHHHHHHHHhcCC---ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAY-SVESLG-RIRVFSIKVALATMCSG---KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        55 ~~~~~l~~~~lf~~f-D~~~~G-~I~~~ef~~aLs~Lc~G---~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +.++..+. -+|..| |++++| +|+-.||+..+......   .-.+.++.+++.. .|+||.|+-.||..++..+.
T Consensus         5 E~ai~~ii-~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la   80 (89)
T d1k8ua_           5 DQAIGLLV-AIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA   80 (89)
T ss_dssp             HHHHHHHH-HHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            44444433 456666 899998 79999999999874422   2234578889888 79999999999988887654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=96.28  E-value=0.00054  Score=40.75  Aligned_cols=24  Identities=8%  Similarity=0.196  Sum_probs=21.6

Q ss_pred             HHHHhhcCCCCCeeehHHHHHHHH
Q psy4949          64 WLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus        64 ~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      -.|++||+|++|.|+..|++..|.
T Consensus         7 eAF~~FDkDg~G~Is~~EL~~vm~   30 (33)
T d2hf5a1           7 EAFRVFDKDGNGYISAAELRHVMT   30 (33)
T ss_dssp             HHHHHHSSSCCSCBCHHHHHHHTT
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHH
Confidence            479999999999999999998764

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: C1-like domain
domain: Pdi-like hypothetical protein At1g60420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.18  E-value=0.002  Score=46.77  Aligned_cols=34  Identities=24%  Similarity=0.670  Sum_probs=29.7

Q ss_pred             CcccCcCCCCccccceeeeccCCCCccchhhhhCCc
Q psy4949         190 PIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGR  225 (275)
Q Consensus       190 ~~~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~~g~  225 (275)
                      ...|+.|+. ++.|.+|+|..| ||+|...|-..-.
T Consensus        47 ~~~C~~C~~-~~~g~~Y~C~~C-~f~LH~~CA~~P~   80 (89)
T d1v5na_          47 VYTCDKCEE-EGTIWSYHCDEC-DFDLHAKCALNED   80 (89)
T ss_dssp             SCCCTTTSC-CCCSCEEECTTT-CCCCCHHHHHCSS
T ss_pred             CCEeCCCCC-CcCCcEeEeccC-CCEecHHHcCCCc
Confidence            578999997 899999999998 7999999986543

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.08  E-value=0.0021  Score=37.40  Aligned_cols=25  Identities=12%  Similarity=0.110  Sum_probs=21.2

Q ss_pred             HHHHHhhcCCCCCeeehHHHHHHHH
Q psy4949          63 NWLLSAYSVESLGRIRVFSIKVALA   87 (275)
Q Consensus        63 ~~lf~~fD~~~~G~I~~~ef~~aLs   87 (275)
                      .-.|++||+|+||.|+..||...|-
T Consensus         7 ae~FRifDkNaDGyiD~eEl~~ilr   31 (34)
T d1ctda_           7 ANAFRIFDKNADGYIDIEELGEILR   31 (34)
T ss_dssp             HHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHccCCcccccHHHHHHHHH
Confidence            3578999999999999999987764

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=95.82  E-value=0.016  Score=41.21  Aligned_cols=71  Identities=10%  Similarity=0.135  Sum_probs=45.5

Q ss_pred             hHHHHHHHHHHcCCCCcCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHHHHHHHHhhcCCCCCeeehHHHH
Q psy4949           4 DIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIK   83 (275)
Q Consensus         4 d~~~~~e~f~~~~l~~~~~~~~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~~~~lf~~fD~~~~G~I~~~ef~   83 (275)
                      .|.+++++|+..--+-. ....++..++..+|...+..+.+.         +.     ++-+++-.|.|+||+|+|.||+
T Consensus         8 ai~~ii~~F~kya~~dG-~~~~l~~~Elk~ll~~e~~~~~~~---------~~-----v~~i~~~~D~n~DG~IdF~EF~   72 (87)
T d1xk4a1           8 ALNSIIDVYHKYSLIKG-NFHAVYRDDLKKLLETESPQYIRK---------KG-----ADVWFKELDINTDGAVNFQEFL   72 (87)
T ss_dssp             HHHHHHHHHHHHHTSSS-CTTCBCHHHHHHHHHHHSCHHHHT---------TC-----HHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHHHHHHHcccCC-CCCccCHHHHHHHHHHhcCCccch---------HH-----HHHHHHHhCCCCCCcCcHHHHH
Confidence            36678889966511211 134578888777776544333221         11     3446778899999999999998


Q ss_pred             HHHHHh
Q psy4949          84 VALATM   89 (275)
Q Consensus        84 ~aLs~L   89 (275)
                      .-+.-+
T Consensus        73 ~l~~~l   78 (87)
T d1xk4a1          73 ILVIKM   78 (87)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776543

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.016  Score=41.70  Aligned_cols=28  Identities=14%  Similarity=0.138  Sum_probs=25.6

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      +..+++..|.|++|+|++.||.+|+.++
T Consensus        45 L~~Iw~~~D~~~dG~l~~~EF~~a~~Li   72 (95)
T d2jxca1          45 LGRVWELSDIDHDGMLDRDEFAVAMFLV   72 (95)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            5689999999999999999999988865

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.78  E-value=0.0096  Score=43.36  Aligned_cols=29  Identities=17%  Similarity=0.145  Sum_probs=25.8

Q ss_pred             HHHHHHhhcCCCCCeeehHHHHHHHHHhc
Q psy4949          62 LNWLLSAYSVESLGRIRVFSIKVALATMC   90 (275)
Q Consensus        62 ~~~lf~~fD~~~~G~I~~~ef~~aLs~Lc   90 (275)
                      +..+++.+|.|++|.|++.||.+|+.++.
T Consensus        47 L~~i~~~~D~d~dG~L~~~EF~~am~Li~   75 (99)
T d1qjta_          47 LGKIWDLADTDGKGVLSKQEFFVALRLVA   75 (99)
T ss_dssp             HHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCccCHHHHHHHHHHHH
Confidence            56899999999999999999999987653

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.015  Score=43.23  Aligned_cols=62  Identities=11%  Similarity=0.177  Sum_probs=45.7

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCCCCccChHHHHHHH---------HHHHHHhhcCCCCCeeehHHHHHHHHHh
Q psy4949          25 DVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL---------LNWLLSAYSVESLGRIRVFSIKVALATM   89 (275)
Q Consensus        25 ~l~~~~l~~~L~~lY~~~~k~~P~~~~v~~~~~~~l~---------~~~lf~~fD~~~~G~I~~~ef~~aLs~L   89 (275)
                      .|+..|.+. +..+|..+-++.  .|.|+.+++.+++         ++.+++..|.|++|.|++.||.+|+-++
T Consensus        15 ~lt~ee~~~-y~~lF~~~D~d~--~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li   85 (110)
T d1iq3a_          15 RITEEQREY-YVNQFRSLQPDP--SSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             CCSSSSHHH-HHHHHHHHCCSS--SSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             ccCHHHHHH-HHHHHHHhCCCc--ccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence            455555333 577887776652  3567777766653         4569999999999999999999999755

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.21  E-value=0.0098  Score=34.49  Aligned_cols=30  Identities=17%  Similarity=0.234  Sum_probs=26.2

Q ss_pred             hhhHHHHhchhh-ccCCCceeHHHHHHHHHH
Q psy4949          94 LMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD  123 (275)
Q Consensus        94 l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~  123 (275)
                      -++-|.-.|+++ .+.||+|+++||..||++
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            467788899999 588999999999999885

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=94.93  E-value=0.023  Score=40.38  Aligned_cols=62  Identities=13%  Similarity=0.044  Sum_probs=46.2

Q ss_pred             HHHHhh-cCCCCCee-ehHHHHHHHHHhcCCCh-hhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          64 WLLSAY-SVESLGRI-RVFSIKVALATMCSGKL-MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        64 ~lf~~f-D~~~~G~I-~~~ef~~aLs~Lc~G~l-~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      -+|.-| |++++|.+ +-.|++..|.-..+..+ .+.+.-+++.. .|+||.|+-.||-.++..+.
T Consensus        14 ~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~la   79 (87)
T d1xk4a1          14 DVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMG   79 (87)
T ss_dssp             HHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            345555 88999865 78888888876554433 33467788888 69999999999988887653

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=94.39  E-value=0.033  Score=40.01  Aligned_cols=61  Identities=15%  Similarity=0.287  Sum_probs=43.8

Q ss_pred             HHHHhchhhccCC---CceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          97 KLRYIFSQLCDCN---GHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        97 Klr~~F~ly~D~n---G~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      .+-.+|.-|++.+   +.+++.||..+|+.  .+|..+..    ...+..++.+|..     |++|+.+||+.-+
T Consensus        10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~--El~~~l~~----~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li   78 (90)
T d3cr5x1          10 ALIDVFHQYSGREGDKHKLKKSELKELINN--ELSHFLEE----IKEQEVVDKVMETLDSDGDGECDFQEFMAFV   78 (90)
T ss_dssp             HHHHHHHHHHTSSSSTTSBCHHHHHHHHHH--HCTTTSCC----CCSHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcCcCCHHHHHHHHHH--HHHHHhcC----CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            3456899997444   37999999999974  44544332    1235678888884     7999999998754

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=94.27  E-value=0.13  Score=36.43  Aligned_cols=70  Identities=16%  Similarity=0.105  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHhhc-CCCC-CeeehHHHHHHHHHhcCC-----ChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYS-VESL-GRIRVFSIKVALATMCSG-----KLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVL  125 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD-~~~~-G~I~~~ef~~aLs~Lc~G-----~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~  125 (275)
                      +.++..+. -+|.-|+ ++++ ++|+-.||+..|.-....     .-.+-+.-+++.. .|+||.|+-.||-.++..+.
T Consensus         4 E~ai~~li-~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l~   81 (87)
T d1e8aa_           4 EEHLEGIV-NIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIAL   81 (87)
T ss_dssp             HHHHHHHH-HHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence            34444444 5677774 4554 479999999999764432     2235578899988 79999999999988887653

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.23  E-value=0.054  Score=38.66  Aligned_cols=67  Identities=13%  Similarity=0.150  Sum_probs=46.4

Q ss_pred             HHHhchhhccCCCceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC---------CCcccHHHHHHHHhcCCC
Q psy4949          98 LRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG---------NGKVTVNDFMDTMMSEPG  168 (275)
Q Consensus        98 lr~~F~ly~D~nG~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~---------d~~Is~~eFl~~~~~d~~  168 (275)
                      ++.+|+-|+++.+.||.++|..+|++..+-+.         .++..+.++|.+         .+.+|++.|+.++.++  
T Consensus        10 i~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~---------~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~--   78 (94)
T d1qasa1          10 IDRAFEEAAGSAETLSVERLVTFLQHQQREEE---------AGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA--   78 (94)
T ss_dssp             HHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTT---------CSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS--
T ss_pred             HHHHHHHHhCCCCccCHHHHHHHHHHHcCCcc---------CCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc--
Confidence            46789999877789999999999998543321         123334444333         4789999999999984  


Q ss_pred             Ccccchhh
Q psy4949         169 PACLIWLP  176 (275)
Q Consensus       169 Pq~lvWL~  176 (275)
                       ..-+|-|
T Consensus        79 -~N~i~~p   85 (94)
T d1qasa1          79 -DGNAFSL   85 (94)
T ss_dssp             -TTBSBCG
T ss_pred             -ccCCCCc
Confidence             3444533

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=93.20  E-value=0.053  Score=38.33  Aligned_cols=61  Identities=13%  Similarity=0.220  Sum_probs=42.9

Q ss_pred             HHHhchhhccCC---CceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          98 LRYIFSQLCDCN---GHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        98 lr~~F~ly~D~n---G~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      +-.+|.-|+..+   +.+++.||..+|+.  .+|..+..   ....+..++.+|..     |++|+.+||+.-+
T Consensus        12 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~--El~~~l~~---~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   80 (83)
T d1xk4c1          12 IINTFHQYSVKLGHPDTLNQGEFKELVRK--DLQNFLKK---ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   80 (83)
T ss_dssp             HHHHHHHHHTTSSSTTSBCHHHHHHHHHH--HTTTTTTT---GGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHhCcCCCcccCCHHHHHHHHHH--HhHHHhcC---CCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            456899997544   48999999999985  45543321   01134567888875     7999999998754

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=93.07  E-value=0.052  Score=39.27  Aligned_cols=61  Identities=11%  Similarity=0.304  Sum_probs=41.5

Q ss_pred             HHHHhchhhccCCC---ceeHHHHHHHHHHHHhchhhccCCCCCCCchHHHhhhhcC-----CCcccHHHHHHHH
Q psy4949          97 KLRYIFSQLCDCNG---HLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG-----NGKVTVNDFMDTM  163 (275)
Q Consensus        97 Klr~~F~ly~D~nG---~i~~~el~~~L~~i~~i~~~~gE~~~f~~~e~~v~~cF~~-----d~~Is~~eFl~~~  163 (275)
                      .+-.+|.-|+..+|   .+++.||..+|+.  .+|..+...    ..+..++.++..     ||.|+.+||+.-+
T Consensus        10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~--El~~~l~~~----~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   78 (94)
T d1j55a_          10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEK--ELPGFLQSG----KDKDAVDKLLKDLDANGDAQVDFSEFIVFV   78 (94)
T ss_dssp             HHHHHHHHHTTSSSCTTEECHHHHHHHHHH--HSTTCC----------CHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCcccCCHHHHHHHHHH--HHHHHhcCC----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            34568999975444   8999999999984  445433321    124568888774     7999999998855

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=85.96  E-value=0.73  Score=32.91  Aligned_cols=69  Identities=16%  Similarity=0.144  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHHhhc-CCCC-CeeehHHHHHHHHH-----hcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHH
Q psy4949          55 EVLSGLLLNWLLSAYS-VESL-GRIRVFSIKVALAT-----MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDV  124 (275)
Q Consensus        55 ~~~~~l~~~~lf~~fD-~~~~-G~I~~~ef~~aLs~-----Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i  124 (275)
                      +.++..+. -+|..|. ++++ ++++-.||+.-|.-     |...+=.+-+.-+|+.. .|+||.|+-+|+-.++..+
T Consensus         5 E~ai~~ii-~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_           5 ERCIESLI-AIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHH-HHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            44444443 4455554 3343 67888888877753     44434345588889988 7999999999998877655

>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: LIM domain
domain: Four and a half LIM domains 3, FHL3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.84  E-value=0.24  Score=28.26  Aligned_cols=28  Identities=21%  Similarity=0.649  Sum_probs=23.7

Q ss_pred             ccCcCCCCccccceeeeccCCCCccchhhhh
Q psy4949         192 ACDACGRANFVGFRYRCAKCGNFQMCQECFW  222 (275)
Q Consensus       192 ~Cd~C~~~pI~G~RykC~~C~~~dLC~~C~~  222 (275)
                      .|.+|+. +..|-||....  +.-.|.+||.
T Consensus         1 vCt~Ck~-~LaGqrFTSrd--e~pYC~~Cfg   28 (32)
T d2cuqa1           1 VCTGCQT-PLAGQQFTSRD--EDPYCVACFG   28 (32)
T ss_dssp             BCSSSCC-BCTTCCEEECS--SSEEEHHHHH
T ss_pred             CccccCc-cccCCccccCC--CCccHHHHhH
Confidence            4899998 99999998764  5677999995

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.07  E-value=2  Score=33.20  Aligned_cols=62  Identities=10%  Similarity=0.116  Sum_probs=45.8

Q ss_pred             HHHHHHHhhcCCC-CCeeehHHHHHHHHHhcCCChhhHHHHhchhh-ccCCCceeHHHHHHHHHHHHhch
Q psy4949          61 LLNWLLSAYSVES-LGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIP  128 (275)
Q Consensus        61 ~~~~lf~~fD~~~-~G~I~~~ef~~aLs~Lc~G~l~dKlr~~F~ly-~D~nG~i~~~el~~~L~~i~~i~  128 (275)
                      .+.|.|.-.|.|+ ||.|+-.|++-....|  -.++.=.+..|+-. .|+||.||..|..    .++.|+
T Consensus        78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~----~Cf~v~  141 (151)
T d1sraa_          78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWA----GCFGIK  141 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHH----HHTTCC
T ss_pred             cceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHH----HHcCCC
Confidence            5779999999995 9999999987744322  24444467777766 6899999999974    355554