Psyllid ID: psy5010

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Secondary Structure (PSIPRED)
ccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mgfwlgvdqedlagsfsiSGTVYGVIASASLALYSihtkkvlpcvnNEIWLLSYYNNVYSSIILLFVSGlfgelktvqdYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKitsplthnisgTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Flexible Loop (DISEMBL)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRemeaqynnkysrv
Low Complexity Region (SEG)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Disordered region (IsUnstruct)
**FWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ**************
Disordered Region (DISOPRED)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT******************
Disordered Region (DISEMBL)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Disordered Region (DISPRO)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME**********
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q9VHT4	337	Probable GDP-fucose trans	yes	N/A	0.977	0.516	0.574	4e-52
Q8BLX4	363	GDP-fucose transporter 1	yes	N/A	0.988	0.484	0.539	5e-52
A6QM03	364	GDP-fucose transporter 1	yes	N/A	0.988	0.483	0.539	7e-48
Q96A29	364	GDP-fucose transporter 1	yes	N/A	0.938	0.458	0.586	2e-46
A7S1L6	339	GDP-fucose transporter 1	N/A	N/A	0.988	0.519	0.5	5e-46
Q968A5	363	GDP-fucose transporter OS	yes	N/A	0.949	0.465	0.502	4e-42
A9UUB8	333	GDP-fucose transporter 1	N/A	N/A	0.938	0.501	0.431	5e-36
Q550W6	368	GDP-fucose transporter 1	yes	N/A	0.769	0.372	0.404	2e-19
Q9UUI8	383	Uncharacterized transport	yes	N/A	0.893	0.415	0.289	3e-06
Q54YK1	382	Putative UDP-sugar transp	no	N/A	0.601	0.280	0.275	0.0007

>sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosophila melanogaster GN=Gfr PE=2 SV=1

 Score =  203 bits (517), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 132/174 (75%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFWLGVDQE L   FS  GT++GV++S +LA++SI TKK L  VN E+WLLSYYNN+YS
Sbjct: 157 VGFWLGVDQESLTEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYYNNLYS 216

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
           +++ L +  + GEL+++  Y  L  ++FW  + + GLCGFAIG+VT L+IK+TS LTHNI
Sbjct: 217 TLLFLPLIIINGELESIITYPHLWASWFWAAMTLSGLCGFAIGFVTALEIKVTSALTHNI 276

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNK 174
           SGTAKACAQTVIA+ +Y++V+  LWW SN VVL  SAAYT VKQ EM  Q+  +
Sbjct: 277 SGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVASAAYTRVKQLEMMRQHQQR 330

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.
Drosophila melanogaster (taxid: 7227)

>sp|Q8BLX4|FUCT1_MOUSE GDP-fucose transporter 1 OS=Mus musculus GN=Slc35c1 PE=2 SV=1

 Score =  203 bits (517), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 95/176 (53%), Positives = 134/176 (76%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+TKKVLP V++ IW L++YNNV + 
Sbjct: 179 GFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIYTKKVLPAVDHSIWRLTFYNNVNAC 238

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           ++ L +  + GEL+ +  +  L++A+FWL + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct: 239 VLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 298

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
           GTAKACAQTV+A  +Y E+K FLWW SN +VL GS+AYT+V+  EM+    +  S+
Sbjct: 299 GTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSSAYTWVRGWEMQKTQEDPSSK 354

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Mus musculus (taxid: 10090)

>sp|A6QM03|FUCT1_BOVIN GDP-fucose transporter 1 OS=Bos taurus GN=SLC35C1 PE=2 SV=1

 Score =  189 bits (480), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 95/176 (53%), Positives = 127/176 (72%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLGVDQE   G+ S +GT++GV+AS  ++L +I+TKKVLP V+  IW L++YNN  + 
Sbjct: 180 GFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNAIYTKKVLPAVDGSIWRLTFYNNANAC 239

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           ++ L +    GEL+ +  +  L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct: 240 VLFLPLLLALGELRALLAFPQLGSAHFWAMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
           GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+ REM+      + R
Sbjct: 300 GTAKACAQTVLAVLYYEEAKSFLWWTSNMMVLGGSSAYTWVRGREMKKTQEEPHPR 355

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Bos taurus (taxid: 9913)

>sp|Q96A29|FUCT1_HUMAN GDP-fucose transporter 1 OS=Homo sapiens GN=SLC35C1 PE=1 SV=1

 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/167 (58%), Positives = 127/167 (76%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLGVDQE   G+ S  GTV+GV+AS  ++L +I+T KVLP V+  IW L++YNNV + 
Sbjct: 180 GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNAC 239

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           I+ L +  L GEL+ ++D+A L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct: 240 ILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
           GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+  EM+
Sbjct: 300 GTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMK 346

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Homo sapiens (taxid: 9606)

>sp|A7S1L6|FUCT1_NEMVE GDP-fucose transporter 1 OS=Nematostella vectensis GN=slc35c1 PE=3 SV=1

 Score =  183 bits (465), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/176 (50%), Positives = 124/176 (70%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GF +GVDQE  +G  S SG ++GV+AS  ++L +I+TKK +P V+N IW L  YNN  + 
Sbjct: 151 GFLMGVDQEGSSGKISYSGVLFGVLASLCVSLNAIYTKKFIPAVDNNIWRLQLYNNFNAC 210

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
            + L +  L GE+  V  + +L++AYFWL + IGG+ G AIGY+T LQIK+TSPLTHNIS
Sbjct: 211 FLFLPLMALLGEIGEVAHFPNLSSAYFWLMMTIGGVFGIAIGYITGLQIKVTSPLTHNIS 270

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
           GTAKAC QT+++  +++E K  LWW+SN +VL GS AYT V+  EM+  +  + S+
Sbjct: 271 GTAKACVQTIMSVSYFHETKTALWWLSNAMVLGGSMAYTRVRHSEMKKAHTIQASK 326

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Nematostella vectensis (taxid: 45351)

>sp|Q968A5|FUCT1_CAEEL GDP-fucose transporter OS=Caenorhabditis elegans GN=C50F4.14 PE=1 SV=1

 Score =  170 bits (430), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/169 (50%), Positives = 119/169 (70%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GF LGVDQE + G+ S +G ++GV+AS S+AL +I+T+KVL  V + +W L+ YNN+ + 
Sbjct: 166 GFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRKVLSSVGDCLWRLTMYNNLNAL 225

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           ++ L +    GE   V  +  L    FW+ + +GG+ GF +GYVT  QI+ TSPLTHNIS
Sbjct: 226 VLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFGFMMGYVTGWQIQATSPLTHNIS 285

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ 170
           GTAKA AQTV+A  WY+E+K  LWW SN+VVLFGS  YT+V++R M+ +
Sbjct: 286 GTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYTYVQKRVMDKK 334

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|A9UUB8|FUCT1_MONBE GDP-fucose transporter 1 OS=Monosiga brevicollis GN=slc35c1 PE=3 SV=1

 Score =  150 bits (379), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 109/167 (65%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GF++GV++E      +++G +YGV+AS  +AL +I+ KKV+P V+N++W L+ YNN+ + 
Sbjct: 153 GFFVGVNKEQEQADLTMAGIMYGVLASLCVALNAIYIKKVMPFVDNDMWKLTAYNNMNAI 212

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
            + L V    GE+  +    D+ +  +W  + + GL G AIG V+ LQI +TSPLTHNIS
Sbjct: 213 FLFLPVITFMGEIPDIAASEDVYSGNYWFLMTVAGLLGIAIGLVSMLQINVTSPLTHNIS 272

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
           GT+KACAQT++A    +E +   WW+ N  VL GS  Y  VK+ EM+
Sbjct: 273 GTSKACAQTILALQLNDESRTATWWLGNVFVLGGSLGYVLVKRAEMK 319

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Monosiga brevicollis (taxid: 81824)

>sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 4/141 (2%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GF LG   E    +FS  G ++G+++S  +ALYSI  K+VLP V+   W LS YN   S
Sbjct: 203 LGFVLGSAGE---VNFSWLGIIFGLLSSFFVALYSIAVKRVLPAVDGNEWRLSIYNTAIS 259

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
             ++  +  + GE  T+ D   L +  FW ++ + GL G+ I     +QIK TSPLT+ I
Sbjct: 260 IGLIFPLILVSGEANTILDEPLLYSGTFWFYMTVAGLMGYLISISVFMQIKHTSPLTNTI 319

Query: 121 SGTAKACAQTVIA-SYWYNEV 140
           SGT KAC QT++A  +W N +
Sbjct: 320 SGTVKACVQTILAVVFWGNPI 340

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9UUI8|YIY4_SCHPO Uncharacterized transporter C22F8.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22F8.04 PE=3 SV=1

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVL---PCVNNEIWLLSYYNN 57
           +GF  GV  E         G + GV +S + A+ S+  K  +   P ++  I++ S   +
Sbjct: 216 LGFGFGVRFESHVAPI---GIILGVWSSFTTAIESVAVKHYVHEYPTLD-LIYIFSALMS 271

Query: 58  VYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLT 117
           V+   +LL V+ L   L TVQ+   +    F++ L +  L  F +   T  QIK+TSP+T
Sbjct: 272 VFC--LLLSVASL-ELLHTVQEVVGMQAIKFFIVLILSSLSNFYLNIATFTQIKVTSPVT 328

Query: 118 HNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE 166
           + IS +A++  QT++A  +  E           ++L G+  YT  K+ E
Sbjct: 329 YMISVSARSILQTLLAVAFLGETLYGNRIYGVILILVGTLLYTLAKEHE 377

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 32  ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 91
           A Y I+ KKV    N   + + YYN+V S  I +F+  +  E++  Q +  L  + F  +
Sbjct: 248 ASYLIYVKKV--ASNMSTYDMLYYNSVLSLPITIFLMIVNQEIEYFQTFEHLYDSSFQAY 305

Query: 92  LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEV 140
             +    GF + +       + SPLT +++G  K  A T+I +  +N++
Sbjct: 306 FILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKNIASTIIGAMVFNDI 354

May be nvolved in the import of UDP-sugars.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
345493294	326	PREDICTED: probable GDP-fucose transport	0.994	0.542	0.621	2e-59
321466053	334	hypothetical protein DAPPUDRAFT_321827 [	0.971	0.517	0.641	2e-56
380024355	335	PREDICTED: probable GDP-fucose transport	1.0	0.531	0.578	6e-56
357611201	372	putative GDP-fucose transporter [Danaus	0.949	0.454	0.644	9e-56
350423987	334	PREDICTED: probable GDP-fucose transport	1.0	0.532	0.573	4e-55
340726394	335	PREDICTED: LOW QUALITY PROTEIN: probable	1.0	0.531	0.573	5e-55
193709262	328	PREDICTED: probable GDP-fucose transport	0.977	0.530	0.621	5e-55
383847981	332	PREDICTED: probable GDP-fucose transport	0.971	0.521	0.589	6e-55
66555662	335	PREDICTED: probable GDP-fucose transport	1.0	0.531	0.567	1e-54
157116197	335	GDP-fucose transporter, putative [Aedes	0.977	0.519	0.614	1e-53

>gi|345493294|ref|XP_001605099.2| PREDICTED: probable GDP-fucose transporter-like [Nasonia vitripennis]

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/177 (62%), Positives = 138/177 (77%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLGVDQE++AGS SI+GT +GV+ S +L+LYSIHTKKVLP VN EIWLLSYYNN+YS 
Sbjct: 148 GFWLGVDQENIAGSLSITGTFFGVLGSLTLSLYSIHTKKVLPVVNQEIWLLSYYNNIYSV 207

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           ++ L +  + GE  TV +Y  +    FW  + +GGLCGFAIGYVT LQIK+TSPLTHNIS
Sbjct: 208 VLFLPLMLINGEFNTVYNYDKIGDLDFWSAMIVGGLCGFAIGYVTMLQIKVTSPLTHNIS 267

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV 178
           GTAKAC QTV+A++WYNE KPFLWW+SN++VL  SAAY  +KQ  M+  +  + S +
Sbjct: 268 GTAKACVQTVLATHWYNESKPFLWWLSNFIVLLASAAYARIKQLSMKQAFAKQVSVI 324

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321466053|gb|EFX77051.1| hypothetical protein DAPPUDRAFT_321827 [Daphnia pulex]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/173 (64%), Positives = 136/173 (78%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLGVDQE +AGS SISGT+YGV+AS  ++L SI+TKKVLP V+  IWLL YYNN+ + 
Sbjct: 158 GFWLGVDQEGVAGSLSISGTIYGVLASLFVSLNSIYTKKVLPFVDQSIWLLGYYNNLNAC 217

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           ++ L +  L GEL T+  +       FW  +  GG+ GFAIGYVT LQI++TSPLTHNIS
Sbjct: 218 LLFLPLMLLNGELPTLMSFQGYGNLTFWTMMVAGGVFGFAIGYVTGLQIQVTSPLTHNIS 277

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNK 174
           GTAKACAQTV+A+YWY+EVKPFLWW+SNWVVLFGSAAYT V+Q+EME  +  K
Sbjct: 278 GTAKACAQTVLATYWYSEVKPFLWWISNWVVLFGSAAYTRVRQQEMERNHKAK 330

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024355|ref|XP_003695966.1| PREDICTED: probable GDP-fucose transporter-like [Apis florea]

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 103/178 (57%), Positives = 137/178 (76%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFWLGVDQE +AGS SI GT++GV+ S +L+LYSIH K+VLP +N +IWLLSYYNN YS
Sbjct: 153 IGFWLGVDQEHIAGSLSILGTIFGVLGSLTLSLYSIHVKQVLPKLNQDIWLLSYYNNAYS 212

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
            II L +  + GE  TV +Y  + + YFWL + IGG+CGFAIGY T LQIK+TSPLTHNI
Sbjct: 213 IIIFLPLMIVNGEHITVYNYDKIGSFYFWLVMIIGGICGFAIGYATALQIKVTSPLTHNI 272

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV 178
           SGTAKAC QT++A+YW+NE K F+WW+SN++VL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 273 SGTAKACVQTILATYWFNEEKSFMWWISNFIVLSASAMYAKLRQVDLSKKYKEEKQQL 330

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357611201|gb|EHJ67364.1| putative GDP-fucose transporter [Danaus plexippus]

 Score =  221 bits (563), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 109/169 (64%), Positives = 132/169 (78%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GF+LGVDQE L GSFS+ GT+YGVI S  L+LYSI+TKKVLP VN E+WLLSYYNN YS 
Sbjct: 191 GFYLGVDQESLLGSFSLIGTIYGVIGSLMLSLYSIYTKKVLPSVNQEVWLLSYYNNAYSI 250

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           I+ + +  + GEL  + +Y + +++YFW+ + +GGLCGFAIGYVT+LQIK+TSPLTHNIS
Sbjct: 251 ILFIPLMIINGELSVLWNYTNFHSSYFWMQMLVGGLCGFAIGYVTSLQIKVTSPLTHNIS 310

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ 170
           GTAKACAQTVIA+ WYNE K  LWW SN +VL  SA Y   KQ EME  
Sbjct: 311 GTAKACAQTVIATQWYNESKNGLWWTSNVIVLASSALYARFKQVEMEEH 359

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423987|ref|XP_003493654.1| PREDICTED: probable GDP-fucose transporter-like [Bombus impatiens]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 102/178 (57%), Positives = 137/178 (76%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFWLGVDQE +AGS SI GT++GV+ S +L+LYSIH K+VLP +N +IWLLSY NN YS
Sbjct: 152 IGFWLGVDQEHIAGSLSILGTIFGVLGSLTLSLYSIHMKQVLPALNQDIWLLSYCNNAYS 211

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
            II L +    GE  TV +Y  + ++YFWL + +GG+CGFAIG+ T LQIK+TSPLTHNI
Sbjct: 212 VIIFLPLMLANGEHVTVYNYDKIGSSYFWLAMVVGGICGFAIGFATALQIKVTSPLTHNI 271

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV 178
           SGTAKACAQTV+A+YW++E K F+WW+SN+VVL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 272 SGTAKACAQTVLATYWFDEKKSFMWWISNFVVLSASAMYARLRQLDISREYKEEKQQL 329

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726394|ref|XP_003401544.1| PREDICTED: LOW QUALITY PROTEIN: probable GDP-fucose transporter-like [Bombus terrestris]

 Score =  219 bits (557), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 102/178 (57%), Positives = 137/178 (76%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFWLGVDQE +AGS SI GT++GV+ S +L+LYSIH K+VLP +N +IWLLSY NN YS
Sbjct: 153 IGFWLGVDQEHIAGSLSILGTIFGVLGSLTLSLYSIHMKQVLPTLNQDIWLLSYCNNAYS 212

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
            II L +    GE  TV +Y  + ++YFWL + +GG+CGFAIG+ T LQIK+TSPLTHNI
Sbjct: 213 VIIFLPLMLANGEHITVYNYDKIGSSYFWLAMIVGGICGFAIGFATALQIKVTSPLTHNI 272

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV 178
           SGTAKACAQTV+A+YW++E K F+WW+SN+VVL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 273 SGTAKACAQTVLATYWFDEKKSFMWWISNFVVLSASAMYARLRQLDISREYKEEKQQL 330

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193709262|ref|XP_001949938.1| PREDICTED: probable GDP-fucose transporter-like [Acyrthosiphon pisum]

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 110/177 (62%), Positives = 139/177 (78%), Gaps = 3/177 (1%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GF+LGVDQE+L+GSFS+ GTV+GV++S SLA YSI  KKVLP VNN+IWLLSY+NNVY++
Sbjct: 153 GFFLGVDQENLSGSFSLVGTVFGVLSSFSLAYYSIQIKKVLPDVNNQIWLLSYFNNVYAT 212

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           I  LF+  L  E K + +Y+ L    F L + IGG+CG +IGY+T LQ+++TSPLTHNIS
Sbjct: 213 I--LFIPLLALEAKELSNYSKLTEYKFLLLMIIGGVCGLSIGYITVLQVQVTSPLTHNIS 270

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNN-KYSR 177
           GTAK+C QTV+AS+WYN+ K  +WW SN+VVL GSAAYT VK REME +Y    YSR
Sbjct: 271 GTAKSCFQTVLASFWYNQWKSSMWWFSNFVVLGGSAAYTIVKNREMEKKYRPIAYSR 327

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847981|ref|XP_003699631.1| PREDICTED: probable GDP-fucose transporter-like [Megachile rotundata]

 Score =  218 bits (556), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 102/173 (58%), Positives = 132/173 (76%)

Query: 2   GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
           GFWLGVDQE +AGS S+ GT++G++ S  L+LYSIH K+VLP VN +IWLLSYYNN YS 
Sbjct: 154 GFWLGVDQEHIAGSLSVLGTIFGILGSLMLSLYSIHMKQVLPAVNQDIWLLSYYNNAYSV 213

Query: 62  IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
           II L +    GE  TV +Y  + + +FW  + +GG+CGFAIGYVT LQIK+TSPLTHNIS
Sbjct: 214 IIFLPLMVANGEHITVYNYDKIGSLFFWSAMIVGGICGFAIGYVTALQIKVTSPLTHNIS 273

Query: 122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNK 174
           GTAKACAQTV+A+YW+NE K F+WW+SN++VL  SA Y   +Q ++  +Y  +
Sbjct: 274 GTAKACAQTVLATYWFNEEKSFMWWMSNFIVLGASAMYARFRQLDLSKEYREE 326

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66555662|ref|XP_623632.1| PREDICTED: probable GDP-fucose transporter [Apis mellifera]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 101/178 (56%), Positives = 136/178 (76%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFWLGVDQE +AGS S+ GT++GV+ S +L+LYSIH K+VLP +N +IWLLSY NN YS
Sbjct: 153 IGFWLGVDQEHVAGSLSVLGTIFGVLGSLTLSLYSIHMKQVLPTLNQDIWLLSYCNNAYS 212

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
            II L +  + GE  TV +Y  + + YFWL + IGG+CGFAIGY T LQIK+TSPLTHNI
Sbjct: 213 IIIFLPLIIVNGEHITVYNYDKIGSFYFWLVMIIGGICGFAIGYATALQIKVTSPLTHNI 272

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV 178
           SGTAKAC QT++A+YW+NE K F+WW+SN++VL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 273 SGTAKACVQTILATYWFNEEKSFMWWISNFIVLSASAMYAKLRQLDLSKKYKEEKQQL 330

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116197|ref|XP_001652791.1| GDP-fucose transporter, putative [Aedes aegypti] gi|108876579|gb|EAT40804.1| AAEL007481-PA [Aedes aegypti]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 136/174 (78%)

Query: 1   MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYS 60
           +GFW+GVDQE L  SFS+ GT++GV+ S SL+LYSI+TK+ L  VN E+WLLSYYNNVYS
Sbjct: 156 IGFWIGVDQESLTESFSLIGTIFGVLGSLSLSLYSIYTKRTLQFVNQEVWLLSYYNNVYS 215

Query: 61  SIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
           ++I + +  + GE + V DY  L   +FW  + +GGLCGFAIG+VT LQIK+TSPLTHNI
Sbjct: 216 AVIFIPLMLINGEFRVVMDYEHLAEPWFWGVMTVGGLCGFAIGFVTALQIKVTSPLTHNI 275

Query: 121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNK 174
           SGTAKACAQTV+A+ W++EVK FLWW SN VVL GSA YT VKQ EM+ ++  +
Sbjct: 276 SGTAKACAQTVLATTWFSEVKSFLWWTSNLVVLIGSALYTRVKQLEMDQRHRQQ 329

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
RGD|1309463	404	Slc35c1 "solute carrier family	0.988	0.435	0.545	1.3e-50
MGI|MGI:2443301	363	Slc35c1 "solute carrier family	0.988	0.484	0.539	3.6e-50
UNIPROTKB|B2RDB2	351	SLC35C1 "cDNA, FLJ96534, highl	0.938	0.475	0.586	2.5e-49
UNIPROTKB|Q96A29	364	SLC35C1 "GDP-fucose transporte	0.938	0.458	0.586	2.5e-49
UNIPROTKB|J9NWS1	351	SLC35C1 "Uncharacterized prote	0.938	0.475	0.574	3.2e-49
UNIPROTKB|A6QM03	364	SLC35C1 "GDP-fucose transporte	0.988	0.483	0.539	1.1e-48
UNIPROTKB|F1SHJ7	371	FUCT1 "Uncharacterized protein	0.949	0.455	0.573	1.8e-48
ZFIN|ZDB-GENE-041212-11	348	slc35c1 "solute carrier family	0.932	0.477	0.577	1.4e-46
UNIPROTKB|E1BV92	365	SLC35C1 "Uncharacterized prote	0.949	0.463	0.529	1.9e-44
WB|WBGene00008237	363	nstp-10 [Caenorhabditis elegan	0.932	0.457	0.517	1.1e-41

RGD|1309463 Slc35c1 "solute carrier family 35, member C1" [Rattus norvegicus (taxid:10116)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 96/176 (54%), Positives = 134/176 (76%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+TKKVLP V++ IW L++YNNV + 
Sbjct:   220 GFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIYTKKVLPAVDHSIWRLTFYNNVNAC 279

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +  + GEL  +  +A LN+A+FW+ + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   280 VLFLPLMVVLGELHALLAFAHLNSAHFWVMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 339

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
             GTAKACAQTV+A  +Y E+K FLWW SN +VL GS+AYT+V+  EM+    +  S+
Sbjct:   340 GTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSSAYTWVRGWEMQKTQEDPSSK 395

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=ISO

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=ISO

MGI|MGI:2443301 Slc35c1 "solute carrier family 35, member C1" [Mus musculus (taxid:10090)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 95/176 (53%), Positives = 134/176 (76%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+TKKVLP V++ IW L++YNNV + 
Sbjct:   179 GFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIYTKKVLPAVDHSIWRLTFYNNVNAC 238

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +  + GEL+ +  +  L++A+FWL + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   239 VLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 298

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
             GTAKACAQTV+A  +Y E+K FLWW SN +VL GS+AYT+V+  EM+    +  S+
Sbjct:   299 GTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSSAYTWVRGWEMQKTQEDPSSK 354

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IMP

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=IMP

UNIPROTKB|B2RDB2 SLC35C1 "cDNA, FLJ96534, highly similar to Homo sapiens GDP-fucose transporter 1, mRNA" [Homo sapiens (taxid:9606)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 98/167 (58%), Positives = 127/167 (76%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S  GTV+GV+AS  ++L +I+T KVLP V+  IW L++YNNV + 
Sbjct:   167 GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNAC 226

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             I+ L +  L GEL+ ++D+A L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   227 ILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 286

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
             GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+  EM+
Sbjct:   287 GTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMK 333

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|Q96A29 SLC35C1 "GDP-fucose transporter 1" [Homo sapiens (taxid:9606)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 98/167 (58%), Positives = 127/167 (76%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S  GTV+GV+AS  ++L +I+T KVLP V+  IW L++YNNV + 
Sbjct:   180 GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNAC 239

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             I+ L +  L GEL+ ++D+A L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   240 ILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
             GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+  EM+
Sbjct:   300 GTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMK 346

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|J9NWS1 SLC35C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 96/167 (57%), Positives = 129/167 (77%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S +GT++GV+AS  ++L +I+TKKVLP V+  IW L++YNNV + 
Sbjct:   167 GFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNAIYTKKVLPAVDGSIWRLTFYNNVNAC 226

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +  L GEL+T+ +++ L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   227 VLFLPLLLLLGELQTLLNFSQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 286

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
             GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+  EM+
Sbjct:   287 GTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMK 333

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QM03 SLC35C1 "GDP-fucose transporter 1" [Bos taurus (taxid:9913)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 95/176 (53%), Positives = 127/176 (72%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S +GT++GV+AS  ++L +I+TKKVLP V+  IW L++YNN  + 
Sbjct:   180 GFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNAIYTKKVLPAVDGSIWRLTFYNNANAC 239

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +    GEL+ +  +  L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   240 VLFLPLLLALGELRALLAFPQLGSAHFWAMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSR 177
             GTAKACAQTV+A  +Y E K FLWW SN +VL GS+AYT+V+ REM+      + R
Sbjct:   300 GTAKACAQTVLAVLYYEEAKSFLWWTSNMMVLGGSSAYTWVRGREMKKTQEEPHPR 355

GO:0000139 "Golgi membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

UNIPROTKB|F1SHJ7 FUCT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 97/169 (57%), Positives = 126/169 (74%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S +GTV+GV+AS  ++L +I+TKKVLP V+  IW L++YNNV + 
Sbjct:   188 GFWLGVDQEGAEGTLSWTGTVFGVLASLCVSLNAIYTKKVLPAVDGSIWRLTFYNNVNAC 247

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             I+ L +  L GEL+ +  +  L +A+FW  + +GGL GFAIGYVT LQIK TSPLTHN+S
Sbjct:   248 ILFLPLLLLLGELRALHHFPLLTSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 307

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ 170
             GTAKACAQTV+A  +Y + K FLWW SN +VL GS AYT+V+  EM+ Q
Sbjct:   308 GTAKACAQTVLAVLYYEDTKSFLWWASNMMVLGGSFAYTWVRGWEMKTQ 356

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-041212-11 slc35c1 "solute carrier family 35, member C1" [Danio rerio (taxid:7955)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 97/168 (57%), Positives = 126/168 (75%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE +AGS S +G V+GVIAS  ++L +I TKKVLP V+  IW LSYYNN+ + 
Sbjct:   160 GFWLGVDQEAVAGSLSWAGVVFGVIASLCVSLNAIFTKKVLPVVDGNIWKLSYYNNLNAI 219

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +  + GE+K+V +++ L   +FW  + +GG+ GFAIGYVT LQIK TSPLTHN+S
Sbjct:   220 VLFLPLLIILGEVKSVFEFSRLTDLHFWGMMTLGGVFGFAIGYVTGLQIKFTSPLTHNVS 279

Query:   122 GTAKACAQTVIAS-YWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
             GTAK+CAQTV+A  YW +E K  LWW SN +VL GS AYT+VK  EM+
Sbjct:   280 GTAKSCAQTVLAVVYWASE-KSTLWWTSNLMVLGGSFAYTWVKGMEMK 326

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BV92 SLC35C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 90/170 (52%), Positives = 122/170 (71%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GFWLGVDQE   G+ S +G ++G++AS  ++L +I+TKKVLP V+  IW L++YNN+ + 
Sbjct:   181 GFWLGVDQEGAEGTLSWTGIIFGILASLCVSLNAIYTKKVLPVVDGSIWHLTFYNNMNAC 240

Query:    62 IILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS 121
             ++ L +  + GE  T+  +  L +  FW  + +GG+ GFAIGYVT LQIK TSPLTHN+S
Sbjct:   241 VLFLPLMMITGEFHTLYHFDKLGSPSFWGMMTLGGVFGFAIGYVTGLQIKFTSPLTHNVS 300

Query:   122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM-EAQ 170
             GTAKACAQTV+A  ++ E K  LWW SN +VL GS AYT+VK  EM +AQ
Sbjct:   301 GTAKACAQTVLAVVYFEETKSLLWWTSNLMVLGGSFAYTWVKGLEMRKAQ 350

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

WB|WBGene00008237 nstp-10 [Caenorhabditis elegans (taxid:6239)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 87/168 (51%), Positives = 120/168 (71%)

Query:     2 GFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSS 61
             GF LGVDQE + G+ S +G ++GV+AS S+AL +I+T+KVL  V + +W L+ YNN+ ++
Sbjct:   166 GFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRKVLSSVGDCLWRLTMYNNL-NA 224

Query:    62 IILLFVSGLF-GELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNI 120
             ++L     LF GE   V  +  L    FW+ + +GG+ GF +GYVT  QI+ TSPLTHNI
Sbjct:   225 LVLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFGFMMGYVTGWQIQATSPLTHNI 284

Query:   121 SGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME 168
             SGTAKA AQTV+A  WY+E+K  LWW SN+VVLFGS  YT+V++R M+
Sbjct:   285 SGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYTYVQKRVMD 332

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q968A5	FUCT1_CAEEL	No assigned EC number	0.5029	0.9494	0.4655	yes	N/A
Q96A29	FUCT1_HUMAN	No assigned EC number	0.5868	0.9382	0.4587	yes	N/A
Q8BLX4	FUCT1_MOUSE	No assigned EC number	0.5397	0.9887	0.4848	yes	N/A
A6QM03	FUCT1_BOVIN	No assigned EC number	0.5397	0.9887	0.4835	yes	N/A
Q9VHT4	FUCT1_DROME	No assigned EC number	0.5747	0.9775	0.5163	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	178
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-04
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	0.001

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 11/149 (7%)

Query: 20  GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLS-----YYNNVYSSIILLFVSGLFGEL 74
           G +  + ASA  AL  I ++K+L     +   L+     YY +  + I+LL         
Sbjct: 1   GFILALAASALFALRLILSQKLL--KKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGF 58

Query: 75  KTVQDYADLNTA----YFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQT 130
           K  +             + L L + G+  F         +  TSPLT +++GT K     
Sbjct: 59  KLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVI 118

Query: 131 VIASYWYNEVKPFLWWVSNWVVLFGSAAY 159
           V++   + +   FL  +   + + G   Y
Sbjct: 119 VLSVIIFGDPVTFLNILGLAIAILGVVLY 147

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 3/153 (1%)

Query: 19  SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQ 78
            G ++      S A + +  +K +   N + +   +YNN+ S  ILL  S LF +     
Sbjct: 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN 214

Query: 79  DYADL-NTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWY 137
              +L   +   +F  I GLC   I Y +   +++TS  T+++ G        +    ++
Sbjct: 215 LANNLSVDSLMAMF--ISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFF 272

Query: 138 NEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ 170
           +    FL   S  +     A Y   K ++ + Q
Sbjct: 273 DAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ 305

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
KOG1442|consensus	347		99.92
KOG1441|consensus	316		99.88
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.86
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.83
KOG1444|consensus	314		99.82
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.75
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.74
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.74
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.72
PLN00411	358	nodulin MtN21 family protein; Provisional	99.69
PRK11272	292	putative DMT superfamily transporter inner membran	99.68
PRK11689	295	aromatic amino acid exporter; Provisional	99.66
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.65
KOG1581|consensus	327		99.55
KOG1580|consensus	337		99.49
PRK15430	296	putative chloramphenical resistance permease RarD;	99.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.43
COG2510	140	Predicted membrane protein [Function unknown]	99.42
KOG1443|consensus	349		99.41
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.39
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.38
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.34
KOG1582|consensus	367		99.32
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.3
PRK15430	296	putative chloramphenical resistance permease RarD;	99.23
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.19
KOG1583|consensus	330		99.19
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.11
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.11
PLN00411	358	nodulin MtN21 family protein; Provisional	99.04
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.94
COG2962	293	RarD Predicted permeases [General function predict	98.85
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.74
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.72
PRK11272	292	putative DMT superfamily transporter inner membran	98.71
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.71
KOG2234|consensus	345		98.7
KOG2765|consensus	416		98.65
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.64
KOG4510|consensus	346		98.64
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.52
COG2962	293	RarD Predicted permeases [General function predict	98.46
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.44
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.41
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.26
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.22
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.16
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.16
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.15
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.08
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.05
PRK10650	109	multidrug efflux system protein MdtI; Provisional	98.01
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.93
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.9
COG2076	106	EmrE Membrane transporters of cations and cationic	97.85
PRK11431	105	multidrug efflux system protein; Provisional	97.78
KOG4510|consensus	346		97.76
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.68
PRK13499	345	rhamnose-proton symporter; Provisional	97.62
KOG3912|consensus	372		97.55
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.55
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.52
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.43
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.08
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.06
KOG2766|consensus	336		97.04
KOG2234|consensus	345		96.94
KOG4314|consensus	290		96.46
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.26
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.09
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.7
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.54
KOG1441|consensus	316		94.87
KOG2765|consensus	416		92.57
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.45
PRK13499	345	rhamnose-proton symporter; Provisional	92.29
KOG4314|consensus	290		90.18
KOG3912|consensus	372		89.42
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	88.86
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	87.25
KOG1580|consensus	337		87.18
KOG1581|consensus	327		86.36
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	83.68
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	83.3
KOG1444|consensus	314		80.07

>KOG1442|consensus

Probab=99.92  E-value=2e-25  Score=173.81  Aligned_cols=175  Identities=52%  Similarity=0.820  Sum_probs=165.9

Q ss_pred             CceeEeccccCCCccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcc
Q psy5010           1 MGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDY   80 (178)
Q Consensus         1 ~~~~~gv~~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~   80 (178)
                      .|+++||..|..+..++|.|.++++.++++.|+..+++||.....+..-+.+.+|+|..+.++.+|.....||...++.+
T Consensus       167 ~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~  246 (347)
T KOG1442|consen  167 LGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF  246 (347)
T ss_pred             ehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc
Confidence            48999999999999999999999999999999999999998877766789999999999999999999999999999998


Q ss_pred             cccccchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          81 ADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        81 ~~~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      |+.+...+|..+.++|++||.++|.+.+.+|.+||+|.++-+..|.+.++++++.+++|.-+..-|-|-.+++.|..+|.
T Consensus       247 ~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT  326 (347)
T KOG1442|consen  247 PHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT  326 (347)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence            88778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHhhhccC
Q psy5010         161 FVKQREMEAQYNNKY  175 (178)
Q Consensus       161 ~~k~~~~~~~~~~~~  175 (178)
                      +.|++|++++..|+.
T Consensus       327 ~vk~~em~~~~~~~s  341 (347)
T KOG1442|consen  327 LVKEHEMRKASAQRS  341 (347)
T ss_pred             HHHHHHHHhhccCCC
Confidence            999999998877654

>KOG1441|consensus

Probab=99.88  E-value=6.7e-23  Score=165.57  Aligned_cols=165  Identities=24%  Similarity=0.274  Sum_probs=140.8

Q ss_pred             eeEeccccCC-CccccHHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCchhHHHHHHhHHHHHHHH-HHHHHcCChHHHh
Q psy5010           3 FWLGVDQEDL-AGSFSISGTVYGVIASASLALYSIHTKKVL--PCVNNEIWLLSYYNNVYSSIILL-FVSGLFGELKTVQ   78 (178)
Q Consensus         3 ~~~gv~~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~--~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~~~~~~~~   78 (178)
                      +..||++++. |.++|+.|...++++.+..++++|+.|+.+  ++++.|++++++|+.+++..+++ |.....+..... 
T Consensus       146 iv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~-  224 (316)
T KOG1441|consen  146 IVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFV-  224 (316)
T ss_pred             eeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccccee-
Confidence            4689999999 999999999999999999999999999998  46789999999999999999999 876654321110 


Q ss_pred             cc-cccccchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhh
Q psy5010          79 DY-ADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus        79 ~~-~~~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~  157 (178)
                      .+ ...++...+. ..+..+++++.|.+.|++++++||+|+++.|.+|.++.+..|+++|+|++|+.+.+|+++.+.|++
T Consensus       225 ~~~~~~~~~~~~~-~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~  303 (316)
T KOG1441|consen  225 GFLTAPWFVTFLI-LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF  303 (316)
T ss_pred             eeeccccchhhHH-HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence            10 1123334444 344449999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHH
Q psy5010         158 AYTFVKQREMEA  169 (178)
Q Consensus       158 l~~~~k~~~~~~  169 (178)
                      +|+..|.+++++
T Consensus       304 ~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  304 LYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHhhhhhcc
Confidence            999988877764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.86  E-value=4.3e-21  Score=140.52  Aligned_cols=142  Identities=26%  Similarity=0.309  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCC-----CCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhccc---c-cc--cchh
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLPC-----VNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYA---D-LN--TAYF   88 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~---~-~~--~~~~   88 (178)
                      |.++++.|+++.|++.++.||..++     .+.++.++.+|+++.+.++++|..+..|+.+......   . ..  .++.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999998877     5899999999999999999999999887655222111   1 01  3456


Q ss_pred             hhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010          89 WLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus        89 ~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      +..++..|++++..+++.+++++++||++.++.+.+|.+..++.|+++|||++|+.+++|+++.+.|+++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7778899999999999999999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.86  E-value=1.9e-21  Score=157.44  Aligned_cols=163  Identities=16%  Similarity=0.134  Sum_probs=123.4

Q ss_pred             EeccccCC-CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHh-cccc
Q psy5010           5 LGVDQEDL-AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQ-DYAD   82 (178)
Q Consensus         5 ~gv~~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~-~~~~   82 (178)
                      .||+.... |.++++.|+++++++++++++|.++.||..++.+.|+.+++.|++..+.+.++|.....++.+... +...
T Consensus       130 ~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~  209 (302)
T TIGR00817       130 GGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ  209 (302)
T ss_pred             HHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence            46666655 778889999999999999999999999987744568999999999999999999987665433111 0000


Q ss_pred             ---cccc-hhhhHhhhhHHHHH-HHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhh
Q psy5010          83 ---LNTA-YFWLFLPIGGLCGF-AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus        83 ---~~~~-~~~~~l~~~gv~~~-~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~  157 (178)
                         .... ..+...+..+..++ ..+...+.+++++||++.++.+++||++++++|++++||++|+.+++|.++++.|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~  289 (302)
T TIGR00817       210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF  289 (302)
T ss_pred             hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence               0111 12222333333222 233455578999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHH
Q psy5010         158 AYTFVKQREM  167 (178)
Q Consensus       158 l~~~~k~~~~  167 (178)
                      +|+..|.+|+
T Consensus       290 l~~~~k~~~~  299 (302)
T TIGR00817       290 LYSRVKAQKP  299 (302)
T ss_pred             HHHHHhccCc
Confidence            9987654333

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.83  E-value=7.9e-20  Score=151.07  Aligned_cols=160  Identities=17%  Similarity=0.175  Sum_probs=128.7

Q ss_pred             eEeccccCC-CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCchhHHHHHHhHHHHHHHHHHHHHcCCh--H
Q psy5010           4 WLGVDQEDL-AGSFSISGTVYGVIASASLALYSIHTKKVLPCV-----NNEIWLLSYYNNVYSSIILLFVSGLFGEL--K   75 (178)
Q Consensus         4 ~~gv~~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~-----~~~~~~~~~~~~~~a~~~l~~~~~~~~~~--~   75 (178)
                      +.||.+... |.++++.|++++++|++++|+|+++.||..++.     +.++..+..+..+++.++++|+....+..  .
T Consensus       178 v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~  257 (350)
T PTZ00343        178 VGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV  257 (350)
T ss_pred             HHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            467777777 889999999999999999999999999987654     24566677777999999999988755321  1


Q ss_pred             HHh-cc----cccccchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhH
Q psy5010          76 TVQ-DY----ADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNW  150 (178)
Q Consensus        76 ~~~-~~----~~~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~  150 (178)
                      ..+ ..    +.......+..++.+++..+..|.+.|.++++++|.+.++.+++||++++++|++++||++|+.+++|.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~  337 (350)
T PTZ00343        258 PVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMA  337 (350)
T ss_pred             HHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHH
Confidence            111 00    0000112333456678888888888889999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhHHHHHh
Q psy5010         151 VVLFGSAAYTFVK  163 (178)
Q Consensus       151 lil~g~~l~~~~k  163 (178)
                      +++.|+++|+..|
T Consensus       338 lii~Gv~lYs~~k  350 (350)
T PTZ00343        338 VAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHhhcC
Confidence            9999999999764

>KOG1444|consensus

Probab=99.82  E-value=6.9e-20  Score=146.01  Aligned_cols=159  Identities=21%  Similarity=0.325  Sum_probs=139.2

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHH-hcccccccchhhhH
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV-QDYADLNTAYFWLF   91 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~   91 (178)
                      |.++|..|+.|+..+.++.+.+..+.||..+..+.+.+.+++|+++.+.+.+.....++||++.+ .+++.......+..
T Consensus       151 d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~  230 (314)
T KOG1444|consen  151 DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVV  230 (314)
T ss_pred             cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHH
Confidence            99999999999999999999999999999888888999999999999999999999999998733 22333344667888


Q ss_pred             hhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHHHhh
Q psy5010          92 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQY  171 (178)
Q Consensus        92 l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~~~~  171 (178)
                      +.++|+++++++|+.++|.+.+|+++++++|..+...+.+-+++++|+++++...+|+.+.+.|..+|++.+.+||++++
T Consensus       231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            99999999999999999999999999999996566666666666677799999999999999999999999988877665

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.75  E-value=1.5e-17  Score=134.94  Aligned_cols=148  Identities=20%  Similarity=0.296  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHH--cCChHHHhcccccccchhhhHhhhhH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGL--FGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      .|+++.+++.++.+.+.++.+|..++++.+++++++|+++++.+..++....  ++|..+..++.. ..++.+..++..+
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s  232 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFS  232 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHH
Confidence            3999999999999999999999999889999999999999999999988888  777665544422 2344666677778


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHH
Q psy5010          97 LCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM  167 (178)
Q Consensus        97 v~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~  167 (178)
                      +.+.....+.+.++++.||++.+++..+++.+++++++++||+++++.+|+|.++++.|..+|++.|+|||
T Consensus       233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            88877777778899999999999999999999999999999999999999999999999999999877654

; GO: 0055085 transmembrane transport

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.74  E-value=2.6e-17  Score=132.95  Aligned_cols=141  Identities=12%  Similarity=0.126  Sum_probs=114.7

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhh
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI   94 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (178)
                      +.++.|++++++++++||.|.+..||..+++  ++... .+...++...+.|....+++ .      ..++...|..+++
T Consensus       144 ~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~-~------~~~~~~~~~~~l~  213 (293)
T PRK10532        144 HVDLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAG-E------ALWHWSILPLGLA  213 (293)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccC-c------ccCCHHHHHHHHH
Confidence            4567899999999999999999999986654  55555 45666777777776655432 1      0123345656678


Q ss_pred             hHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHH
Q psy5010          95 GGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  165 (178)
Q Consensus        95 ~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~  165 (178)
                      .|++++.++|..+ +.+++.+|.+.++..+++|++++++|++++||++++.+++|.++++.|.+.+....++
T Consensus       214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999775 7899999999999999999999999999999999999999999999999988765444

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.74  E-value=5.3e-18  Score=129.21  Aligned_cols=150  Identities=21%  Similarity=0.285  Sum_probs=131.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      -.|++|+..+++..+.|.+..||-.+-.+....+.++|+|+++.|++..+....+|+++- +..+-.+.+...++.++|+
T Consensus       154 N~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl  232 (309)
T COG5070         154 NPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGL  232 (309)
T ss_pred             CCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHH
Confidence            369999999999999999999997766666789999999999999999999999887642 1112245566778899999


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHH
Q psy5010          98 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME  168 (178)
Q Consensus        98 ~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~  168 (178)
                      ++....|+.-||++.+|.++++++|++++....+.|.++||||.+...+..+.+-..+...|..+|.+|++
T Consensus       233 ~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         233 CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999998766443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.72  E-value=1.6e-16  Score=128.72  Aligned_cols=150  Identities=13%  Similarity=0.044  Sum_probs=111.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-CchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhh
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCVN-NEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLP   93 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~-~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   93 (178)
                      +.++.|++++++++++|+.|.++.||..++.+ .+......++...+.+.+.+.....++..+........+...|..++
T Consensus       139 ~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  218 (299)
T PRK11453        139 HVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLM  218 (299)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHH
Confidence            44568999999999999999999999765432 12233344554444443333333322211110000123456788899


Q ss_pred             hhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhH
Q psy5010          94 IGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  164 (178)
Q Consensus        94 ~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~  164 (178)
                      +.|+++++++|..+ +.+++.+|.+.+++..++|++++++|++++||++++.+++|.++++.|+++..+.++
T Consensus       219 ~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        219 YLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999887 679999999999999999999999999999999999999999999999987666554

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.69  E-value=8.4e-16  Score=127.34  Aligned_cols=151  Identities=13%  Similarity=0.105  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      ..|+.+++.++++||+|.+..||..++++ ++...+.++..++...+.+.....++.+ ...+...++...+ .+++.++
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~-~i~y~~i  264 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNN-PSVWIIHFDITLI-TIVTMAI  264 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCC-cccceeccchHHH-HHHHHHH
Confidence            45999999999999999999999877663 3345566666655555544444432211 1110011222222 3556666


Q ss_pred             HHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHHHhhh
Q psy5010          98 CGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYN  172 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~~~~~  172 (178)
                      . ..++|..+ +++++.||.++++..+++|++++++|++++||++++.+++|.++++.|+++.++.|++|.+++.+
T Consensus       265 ~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~~~  339 (358)
T PLN00411        265 I-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLL  339 (358)
T ss_pred             H-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhccc
Confidence            5 45666655 69999999999999999999999999999999999999999999999999988777666554433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.68  E-value=7.1e-16  Score=124.49  Aligned_cols=141  Identities=20%  Similarity=0.120  Sum_probs=115.4

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhh
Q psy5010          14 GSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLP   93 (178)
Q Consensus        14 ~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   93 (178)
                      .+.+..|++++++++++||.|.+..||..++   ++.....++...+.+.+.+.....++...     ...+...|..++
T Consensus       145 ~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~  216 (292)
T PRK11272        145 LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALG  216 (292)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHH
Confidence            3556789999999999999999999996542   34556678888888888777665543211     112345677888


Q ss_pred             hhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          94 IGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        94 ~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      +.+++++.+.+..+ +++++.++.+.++..++||+.+.++|++++||++|+.+++|.++++.|+++.+..
T Consensus       217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999998888776 6899999999999999999999999999999999999999999999999876653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.66  E-value=3e-15  Score=121.05  Aligned_cols=134  Identities=13%  Similarity=0.037  Sum_probs=100.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhH
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      ++.|++++++++++||.|.++.||..++.  ++....  . ..+...+.+.....++..      ...+.+.|..+++.+
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~--~-~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~~~~  222 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLF--F-ILTALALWIKYFLSPQPA------MVFSLPAIIKLLLAA  222 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHH--H-HHHHHHHHHHHHHhcCcc------ccCCHHHHHHHHHHH
Confidence            46799999999999999999999986554  555432  2 223333333333333211      113445676667767


Q ss_pred             HHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          97 LCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        97 v~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      + ++.+.|..+ +.+++.+|.+.++..+++|++++++|++++||++++.+++|.++++.|+.+....
T Consensus       223 ~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        223 A-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             H-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            4 567777665 7899999999999999999999999999999999999999999999999766543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.65  E-value=3.2e-15  Score=118.12  Aligned_cols=137  Identities=16%  Similarity=0.193  Sum_probs=113.9

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHh
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL   92 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (178)
                      +.+.+..|++++++++++++.+.+..||..++.+.++.....+.+..+.+++.|.....++.+       ..+...|..+
T Consensus       122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~  194 (260)
T TIGR00950       122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-------QALSLQWGAL  194 (260)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-------CcchHHHHHH
Confidence            456678899999999999999999999987766444555655778888888888877654322       1234466667


Q ss_pred             hhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhh
Q psy5010          93 PIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGS  156 (178)
Q Consensus        93 ~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~  156 (178)
                      ++.++++..+++..+ +++++.++.+.+...+++|+++++++++++||++++.+++|.++++.|+
T Consensus       195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            888988888887766 6899999999999999999999999999999999999999999999886

>KOG1581|consensus

Probab=99.55  E-value=4.5e-14  Score=112.01  Aligned_cols=150  Identities=12%  Similarity=0.042  Sum_probs=131.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhh
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI   94 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (178)
                      ..++.|+.+...+-+..++-+-.++++.+.+++++++++++.|+++++......+.+|.+.+..++-.. .++.+.=++.
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~-hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKE-HPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHc-ChhHHHHHHH
Confidence            356899999999999999999999999999999999999999999999988887777765554444222 3556666777


Q ss_pred             hHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHH
Q psy5010          95 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  165 (178)
Q Consensus        95 ~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~  165 (178)
                      .+.++.+.+.+.|..+++.||++.+++...++++++.++.+.||++++..||+|..++++|.++..+-|.+
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            78889888898899999999999999999999999999999999999999999999999999988876666

>KOG1580|consensus

Probab=99.49  E-value=6.9e-14  Score=107.69  Aligned_cols=160  Identities=15%  Similarity=0.120  Sum_probs=133.7

Q ss_pred             eEeccccCC-Cccc-------cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChH
Q psy5010           4 WLGVDQEDL-AGSF-------SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELK   75 (178)
Q Consensus         4 ~~gv~~~~~-~~~~-------~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~   75 (178)
                      ++||+..-+ |...       --.|-++.++|.-...+....+.|..+++..+.-+|++|.|+.+.+.+-.-.+++||..
T Consensus       149 V~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElw  228 (337)
T KOG1580|consen  149 VVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELW  228 (337)
T ss_pred             HHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHH
Confidence            456665555 3332       34799999999999999999999988777778889999999999999988888999987


Q ss_pred             HHhcccccccchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhh
Q psy5010          76 TVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFG  155 (178)
Q Consensus        76 ~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g  155 (178)
                      ++..+.+.+ +..|.-+...++.+...+.+.|..+...||++.|++...++.++++.|+++|+++++..||+|..+++.+
T Consensus       229 eF~yF~~Rh-P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~a  307 (337)
T KOG1580|consen  229 EFFYFVQRH-PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSA  307 (337)
T ss_pred             HHHHHHHhc-cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHH
Confidence            776554443 3455567888999988889999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhH
Q psy5010         156 SAAYTFVKQ  164 (178)
Q Consensus       156 ~~l~~~~k~  164 (178)
                      ...=....+
T Consensus       308 L~~D~~~GK  316 (337)
T KOG1580|consen  308 LTADVVDGK  316 (337)
T ss_pred             hhhHhhcCC
Confidence            876444433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.45  E-value=2.7e-12  Score=103.85  Aligned_cols=141  Identities=12%  Similarity=0.042  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHH
Q psy5010          22 VYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFA  101 (178)
Q Consensus        22 ~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~  101 (178)
                      .++++++++||.|.+..||..++...+......+..+.+.+...+..  ..... ..   ...+...+..+...|+ .+.
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~---~~~~~~~~~~~~~~g~-~t~  224 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA--DSSTS-HM---GQNPMSLNLLLIAAGI-VTT  224 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc--cCCcc-cc---cCCcHHHHHHHHHHHH-HHH
Confidence            46888999999999999996543212233334444444444332221  11110 00   0011122333444454 344


Q ss_pred             HHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHHH
Q psy5010         102 IGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEA  169 (178)
Q Consensus       102 ~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~~  169 (178)
                      +.+..+ ..+++.+|.+++...+++|+++.++|++++||++++.+++|+++++.|+.+...+.....|+
T Consensus       225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~~~  293 (296)
T PRK15430        225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRR  293 (296)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            555554 78999999999999999999999999999999999999999999999987776655444333

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.43  E-value=6.2e-13  Score=93.15  Aligned_cols=124  Identities=19%  Similarity=0.301  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHHHH-H
Q psy5010          29 ASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVT-T  107 (178)
Q Consensus        29 ~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~  107 (178)
                      ++|+.+.+..|+..++.  ||.....+....+.+ +++.....+..+ .    ...+.+.+......|+++...++.. +
T Consensus         1 ~~~a~~~~~~k~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI--SPLSITFWRFLIAGI-LLILLLILGRKP-F----KNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhccC--CHHHHHHHHHHHHHH-HHHHHHhhcccc-c----cCCChhhhhhhhHhhccceehHHHHHH
Confidence            46889999999988864  899999999999988 666666554322 1    1234556666777777765666554 4


Q ss_pred             HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010         108 LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus       108 ~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ..+++.++...++..+++|+++.++++++++|++++.+++|+.+++.|+++.+
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999997654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.42  E-value=2.6e-12  Score=90.05  Aligned_cols=134  Identities=16%  Similarity=0.184  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHH
Q psy5010          21 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  100 (178)
Q Consensus        21 ~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~  100 (178)
                      .+|++++++.+++-.++.|--+++.  ||...+...+.....++......+|++...    ...+++.|..+.++|+.+-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v--dp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV--DPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc--CccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHHH
Confidence            5799999999999999999988865  788888888888888888888888765421    2246778988999996665


Q ss_pred             HHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010         101 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus       101 ~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      .-.++.|.+++.-.+..+..+.-..+++++++|+++++|++|..+|+|..++..|..+.+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            555676789999888899999999999999999999999999999999999999987644

>KOG1443|consensus

Probab=99.41  E-value=1.2e-12  Score=104.06  Aligned_cols=155  Identities=23%  Similarity=0.228  Sum_probs=128.3

Q ss_pred             EeccccCC-CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---CchhHHHHHHhHHHHHHHHHHHHHcCChHHH---
Q psy5010           5 LGVDQEDL-AGSFSISGTVYGVIASASLALYSIHTKKVLPCVN---NEIWLLSYYNNVYSSIILLFVSGLFGELKTV---   77 (178)
Q Consensus         5 ~gv~~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~---~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~---   77 (178)
                      .||++.++ +.|+|..|.+++..++++.+++..++++.+++.+   .+|.+++++..+.....++|..+..+.....   
T Consensus       149 ~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s  228 (349)
T KOG1443|consen  149 VGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSS  228 (349)
T ss_pred             hheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhh
Confidence            46777777 7799999999999999999999999998876543   6899999999999888898988766543322   


Q ss_pred             --hcccccc-cchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhh
Q psy5010          78 --QDYADLN-TAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLF  154 (178)
Q Consensus        78 --~~~~~~~-~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~  154 (178)
                        ++..+.. .......+...|..+|.+.++.|..+.+++..+.++.|..|.+.+.++|..+.+|+++..+|.|..+++.
T Consensus       229 ~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~a  308 (349)
T KOG1443|consen  229 SIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLA  308 (349)
T ss_pred             hHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHH
Confidence              1111100 1123345677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHH
Q psy5010         155 GSAAY  159 (178)
Q Consensus       155 g~~l~  159 (178)
                      |..+|
T Consensus       309 gi~~~  313 (349)
T KOG1443|consen  309 GILLH  313 (349)
T ss_pred             HHHHh
Confidence            99887

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.39  E-value=2.3e-12  Score=100.08  Aligned_cols=143  Identities=13%  Similarity=0.075  Sum_probs=119.7

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHh
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL   92 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (178)
                      ..+.|+.|..+++.+..||++|.+..||.-+..  +...-+.+.+.++.++.+|+...+.+.. +      +++.....-
T Consensus       142 ~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~gm~vAaviv~Pig~~~ag~~-l------~~p~ll~la  212 (292)
T COG5006         142 VWSLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVGMLVAALIVLPIGAAQAGPA-L------FSPSLLPLA  212 (292)
T ss_pred             cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHHHHHHHHHHhhhhhhhcchh-h------cChHHHHHH
Confidence            357899999999999999999999999987533  5667778888999999999877554321 2      345566666


Q ss_pred             hhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhH
Q psy5010          93 PIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  164 (178)
Q Consensus        93 ~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~  164 (178)
                      +..++++.++-|+.= ..+++.++-++++.-.+||.++.+.|++++||.+|+.||.|++.++.++.--+..-+
T Consensus       213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            788999999999875 479999999999999999999999999999999999999999999999876555433

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.38  E-value=5.6e-12  Score=103.27  Aligned_cols=144  Identities=13%  Similarity=0.141  Sum_probs=109.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhH
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      ...|+++++.++++||+++++.++..++.  +..+......+++.++..+..... |..++...  .|+.+.+..++. .
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~--~w~~~~~~~~v~-~  239 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI--HWTSQVIGLLVG-Y  239 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc--CCChhhHHHHHH-H
Confidence            46899999999999999999999998875  677888888888888887776655 44444332  244444433222 2


Q ss_pred             HHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          97 LCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        97 v~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      .++....|+.. ..++..||+..++---.-+..+.++++++||+++++..++|.++++.|.++|+...+++
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            22333334433 46889999988887777889999999999999999999999999999999998865443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.34  E-value=1.6e-11  Score=98.53  Aligned_cols=135  Identities=12%  Similarity=-0.024  Sum_probs=93.1

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchh-HHHHHHhHHHHHHH-HHHHH---HcCChHHHhcccccccchhh
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIW-LLSYYNNVYSSIIL-LFVSG---LFGELKTVQDYADLNTAYFW   89 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~-~~~~~~~~~a~~~l-~~~~~---~~~~~~~~~~~~~~~~~~~~   89 (178)
                      +.+..|+.++++++++++.|.+..||..++.  ++. ....+. ..+.... .|...   ..++.. .    . .+...+
T Consensus       140 ~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~  210 (281)
T TIGR03340       140 QHRRKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALGYL-GIGFLAMGWPFLLLYLKRHGRS-M----F-PYARQI  210 (281)
T ss_pred             ccchhHHHHHHHHHHHHHHhhhhccccccch--hcccccHHHH-HHHHHHHHHHHHHHHHHHhccc-h----h-hhHHHH
Confidence            4567799999999999999999988864433  222 222221 1121111 22222   112111 0    0 111233


Q ss_pred             hHhhhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhH
Q psy5010          90 LFLPIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAA  158 (178)
Q Consensus        90 ~~l~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l  158 (178)
                      ..+.+.+.++..++|..+ ..+++.++.+.+...+++|++++++|++++||+++..+++|+++++.|+.+
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            345666767777777665 789999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1582|consensus

Probab=99.32  E-value=3.1e-12  Score=100.42  Aligned_cols=151  Identities=15%  Similarity=0.107  Sum_probs=130.6

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHh
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL   92 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (178)
                      ..+||..|+...-.+.++.|.-.-++.|..+.++-++.++.+|...++.++++.....++|..+.+.+....+.+.++..
T Consensus       184 sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~  263 (367)
T KOG1582|consen  184 SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYA  263 (367)
T ss_pred             CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHH
Confidence            45677899999999999999999999999988888899999999999999999999999998877766544455567666


Q ss_pred             hhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHh
Q psy5010          93 PIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus        93 ~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k  163 (178)
                      ++-+..++...-+....++..|+.+++.+...++.+++++|+++|..|+|.+..-|..+++.|.++-.+.|
T Consensus       264 ~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  264 FLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            66666666555555568999999999999999999999999999999999999999999999999866665

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.30  E-value=5.7e-11  Score=94.38  Aligned_cols=148  Identities=15%  Similarity=0.145  Sum_probs=108.1

Q ss_pred             eEeccccCC-Cccc---cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHH-HHhHHHHHHHHHHHHHcCChHHHh
Q psy5010           4 WLGVDQEDL-AGSF---SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSY-YNNVYSSIILLFVSGLFGELKTVQ   78 (178)
Q Consensus         4 ~~gv~~~~~-~~~~---~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~-~~~~~a~~~l~~~~~~~~~~~~~~   78 (178)
                      +.|+.+... +...   +..|+.+++.++++++++.+..|+.. +.  ++..... +..........+...  .+.+   
T Consensus       135 ~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~---  206 (292)
T COG0697         135 LAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RL--GPVTLALLLQLLLALLLLLLFFL--SGFG---  206 (292)
T ss_pred             HHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--ChHHHHHHHHHHHHHHHHHHHHh--cccc---
Confidence            356666665 3332   36899999999999999999999976 33  4555555 343312222222211  1111   


Q ss_pred             cccccccchhhhHhhhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhh
Q psy5010          79 DYADLNTAYFWLFLPIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus        79 ~~~~~~~~~~~~~l~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~  157 (178)
                         ...+...|..+...|+++..+.+..+ ..+++.++...+.....+|+.+.+++++++||+++..+++|..+++.|+.
T Consensus       207 ---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~  283 (292)
T COG0697         207 ---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL  283 (292)
T ss_pred             ---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence               01234567677888888887666664 78999999999999999999999999999999999999999999999998


Q ss_pred             HHHHH
Q psy5010         158 AYTFV  162 (178)
Q Consensus       158 l~~~~  162 (178)
                      +....
T Consensus       284 l~~~~  288 (292)
T COG0697         284 LASLR  288 (292)
T ss_pred             HHhcc
Confidence            77654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.23  E-value=4.3e-10  Score=91.00  Aligned_cols=142  Identities=8%  Similarity=0.027  Sum_probs=107.8

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHh
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL   92 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (178)
                      |.+-...|+++.++++++|+...+..|.. .+  .+|.++.++...++.+++.+.....++......  ...+...+...
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~   76 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY--VPADEILTHRVIWSFFFMVVLMSICRQWSYLKT--LIQTPQKIFML   76 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC--CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH--HHcCHHHHHHH
Confidence            34445689999999999999999999764 43  589999999999999888777655544322110  00122333222


Q ss_pred             hhhHHHHHHHH-HHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          93 PIGGLCGFAIG-YVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        93 ~~~gv~~~~~~-~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      . .+.++...+ .+.++.++.+++...++..+..|++.+++++++++|+++..+++|+++.+.|+.+..
T Consensus        77 ~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         77 A-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             H-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            3 444444444 444588999999999999999999999999999999999999999999999987654

>TIGR00688 rarD rarD protein

Probab=99.19  E-value=7.1e-10  Score=87.75  Aligned_cols=138  Identities=12%  Similarity=0.077  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHH-hcccccccchhhhHhhhhHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV-QDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gv   97 (178)
                      .|.++.++++++|+...+..|. ..+  .+|.++.++...++.+++++.....++.... .+.......+.+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4889999999999999999998 444  5899999999999998887766554432211 01000011222334556666


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHH
Q psy5010          98 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  159 (178)
Q Consensus        98 ~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~  159 (178)
                      +...-..+.++.++.+++.+.+++.+..|++++++++++++|+++..+++|..+.+.|+.+.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            64444455568899999999999999999999999999999999999999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1583|consensus

Probab=99.19  E-value=1.2e-10  Score=91.58  Aligned_cols=146  Identities=16%  Similarity=0.170  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcc----c-----cc--ccch
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDY----A-----DL--NTAY   87 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~----~-----~~--~~~~   87 (178)
                      .|+.+...+.+..|.-.++++...++++.++-|.++|+...+.|..+..   .+|..+.+..    +     ..  .-|.
T Consensus       164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~---~~div~~~~~~~~se~~~~p~~g~~vP~  240 (330)
T KOG1583|consen  164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM---GDDIVSHWRLAFKSESYLIPLLGFKVPS  240 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh---cchHHHHHHHHhcCcceeccccCccccH
Confidence            5888889999999999999999999889899999999999998876543   2343333321    1     00  0133


Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHH
Q psy5010          88 FWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM  167 (178)
Q Consensus        88 ~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~  167 (178)
                      .|..++...+.-.+=--..+.+-.+++++|++++-.+++.++.++|+..|++++|+..|+|.++++.|.++|+-...+.|
T Consensus       241 ~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~  320 (330)
T KOG1583|consen  241 MWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK  320 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            45444443332221111112344678999999999999999999999999999999999999999999999988766555

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.11  E-value=1.7e-09  Score=86.80  Aligned_cols=133  Identities=12%  Similarity=0.059  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHH
Q psy5010          21 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  100 (178)
Q Consensus        21 ~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~  100 (178)
                      .++.+++++++|.+.+..||..++.  ++.  ..+....+.+.+.|......... .+.   ..+.+.|..+...++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQV-GWS---RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccC-CCC---CcchhhHHHHHHHHHHHH
Confidence            4688999999999999999876653  333  45566667777777665431111 010   012234444555555555


Q ss_pred             HHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010         101 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus       101 ~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      ...++.+...+..++...+++.+..|+++.++|++++||+++..+|+|+.+++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            5556666789999999999999999999999999999999999999999999999976543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.11  E-value=9.5e-10  Score=88.90  Aligned_cols=130  Identities=14%  Similarity=0.065  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHH---hHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhh
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYN---NVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI   94 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (178)
                      ..|++++++++++|+.|.+..|+.  ++  +|.+..+.+   .+++..++.+..  .++ ++.      .+...|.. ..
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~------~~~~~~~~-~~  216 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--GV--DGLSVLLPQAIGMVIGGIIFNLGH--ILA-KPL------KKYAILLN-IL  216 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--CC--CcceehhHHHHHHHHHHHHHHHHH--hcc-cch------HHHHHHHH-HH
Confidence            789999999999999999999985  23  677774333   333333333221  111 100      12223433 34


Q ss_pred             hHHHHHHHHHHHH-HHhh-ccCchhhhhhhchhHHHHHHHHHHhcCCcccccch----hhhHHhhhhhhHHHHH
Q psy5010          95 GGLCGFAIGYVTT-LQIK-ITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWW----VSNWVVLFGSAAYTFV  162 (178)
Q Consensus        95 ~gv~~~~~~~~~~-~~i~-~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~----iG~~lil~g~~l~~~~  162 (178)
                      .|++ +.+++..| ...+ +.++.+.++....||+.++++|++++||+.++.++    +|.++++.|+.+-...
T Consensus       217 ~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       217 PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            8888 67777666 6677 99999999999999999999999999999999999    9999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.04  E-value=4.3e-09  Score=87.43  Aligned_cols=137  Identities=12%  Similarity=0.078  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHH
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG   99 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~   99 (178)
                      =+..+++.-++|+.+.++.|...++ +++|....+|...++.++++|+....++....    ...+.+.|..+...|+++
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~----~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL----PPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc----CcchHHHHHHHHHHHHHH
Confidence            4567788899999999999998865 78999999999999999999887654221100    011234556677788887


Q ss_pred             HHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHh------cCCcccccchhhhHHhhhhhhHHHH
Q psy5010         100 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYW------YNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus       100 ~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~------f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      +..+...+..++.++|...+++.+..|+++.++++++      ++|+++..+++|+++.+.|+.+...
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            4333355678999999999999999999999999999      6999999999999999999987554

>TIGR00803 nst UDP-galactose transporter

Probab=98.94  E-value=4.9e-09  Score=81.41  Aligned_cols=135  Identities=10%  Similarity=0.103  Sum_probs=91.2

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcC----ChHHHhccc--ccccchhh
Q psy5010          16 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFG----ELKTVQDYA--DLNTAYFW   89 (178)
Q Consensus        16 ~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~----~~~~~~~~~--~~~~~~~~   89 (178)
                      ..+.|....+.++++.++-.++.+|..++++.+     +|.+.++.++..+.....+    +.......+  ..++...|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            346788888888888889999999976654322     4444444444433321111    111111111  11233333


Q ss_pred             hHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHH
Q psy5010          90 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  159 (178)
Q Consensus        90 ~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~  159 (178)
                      ...    +.......+..+++|+.++++.+++...++++++++|+++|||+++..+++|..+++.|+++|
T Consensus       157 ~~~----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVG----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHH----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            322    223333355668899999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.85  E-value=1e-07  Score=75.89  Aligned_cols=154  Identities=15%  Similarity=0.109  Sum_probs=107.1

Q ss_pred             EeccccCC-CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhccccc
Q psy5010           5 LGVDQEDL-AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADL   83 (178)
Q Consensus         5 ~gv~~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~   83 (178)
                      .||+..+. -.+++|....    =+++|+.|...-|+. +   .++.+-..--.+.-.+..+.+....++-.+..   +.
T Consensus       137 ~GV~~~~~~~g~lpwval~----la~sf~~Ygl~RK~~-~---v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~  205 (293)
T COG2962         137 AGVLIQTWLLGSLPWVALA----LALSFGLYGLLRKKL-K---VDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQ  205 (293)
T ss_pred             HHHHHHHHHcCCCcHHHHH----HHHHHHHHHHHHHhc-C---CchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hc
Confidence            46666666 6677776554    367899999886664 3   24444444444444444444444443333211   11


Q ss_pred             ccchhhhHhhhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          84 NTAYFWLFLPIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        84 ~~~~~~~~l~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      .+...+..+...|... .+....| ..-|+.+=.+.+..++.+|....++|++++||+++..+.+.-+.+-.|..+|+.+
T Consensus       206 ~~~~~~~LLv~aG~vT-avpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         206 NANSLWLLLVLAGLVT-AVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             CCchHHHHHHHhhHHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3445666666666544 4555555 5688899999999999999999999999999999999999999999999999998


Q ss_pred             hHHHHHHh
Q psy5010         163 KQREMEAQ  170 (178)
Q Consensus       163 k~~~~~~~  170 (178)
                      ..+++|++
T Consensus       285 ~l~~~r~~  292 (293)
T COG2962         285 GLYTARKK  292 (293)
T ss_pred             HHHHHhhc
Confidence            87766554

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.74  E-value=2.5e-07  Score=76.77  Aligned_cols=139  Identities=12%  Similarity=0.126  Sum_probs=105.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhH
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      ++.-..+.+.--.+...+++..|+.+++.+ -|+.+...+..++.+++.++....  ..+..+.+  .....|..++..|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~-~P~~l~~~~~~~~~l~~~~~~~~~--~~~~~~~~--~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLP-LPWTISSLQLFVGWLFALLYWATG--FRKIPRIK--SLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCC--CHHHHHHHHHHHH
Confidence            555556666666677788888898888763 299999999999987765554321  11000000  0123556677888


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          97 LCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        97 v~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      +++....+..+.+++.+++..++++...+|+++.++++++++|+++..++.|+.+++.|+.+-.
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            8888776666788999999999999999999999999999999999999999999999997644

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.72  E-value=2e-07  Score=64.94  Aligned_cols=104  Identities=16%  Similarity=0.323  Sum_probs=77.0

Q ss_pred             HhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHH
Q psy5010          56 NNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIAS  134 (178)
Q Consensus        56 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~  134 (178)
                      ....+.+.+.......++..+....   ...+.+.+++..|+++...++..+ +..+..++ .++....+.|+++.++|+
T Consensus         4 r~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    4 RYLFSVLFLLIILLIRGRLRDLFRA---LRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHccHHHHHHH---HHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            4456677777766666665544321   112334455666777765566555 67888875 777888999999999999


Q ss_pred             HhcCCcccccchhhhHHhhhhhhHHHHHh
Q psy5010         135 YWYNEVKPFLWWVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus       135 ~~f~e~~t~~~~iG~~lil~g~~l~~~~k  163 (178)
                      ++|+|+++..+++|..+++.|+.+..+.+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999998877654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.71  E-value=4.7e-07  Score=73.10  Aligned_cols=130  Identities=13%  Similarity=0.015  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHH
Q psy5010          21 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  100 (178)
Q Consensus        21 ~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~  100 (178)
                      .+..++-.+.|+...+..|...++  .+|.+...+...++.+++++.....+...        .+.+.|......|++..
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~--~~p~~~~~~R~~~a~l~ll~~~~~~~~~~--------~~~~~~~~~~~~g~~~~   79 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES--WPPLMMAGVRFLIAGILLLAFLLLRGHPL--------PTLRQWLNAALIGLLLL   79 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CcHHHHHHHHHHHHHHH
Confidence            345677888999999999987664  58999999999999999888766543211        12334555566676665


Q ss_pred             HHHH-HHHHHh-hccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010         101 AIGY-VTTLQI-KITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus       101 ~~~~-~~~~~i-~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      ...+ +.++.. +.+++...++..++.|+++.+++.+ ++|+++..+++|..+.+.|+.+...
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            4433 334566 7788888899999999999999985 7999999999999999999876543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.71  E-value=2.1e-07  Score=66.52  Aligned_cols=118  Identities=13%  Similarity=0.103  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC   98 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~   98 (178)
                      .|+++.+.+.++.+.-+++.|+-.++.+..  +.... . .  ..+.   ..             .++.   ..++.|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~--~~~~~-~-~--~~~~---~~-------------~~p~---~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLL--SHAWD-F-I--AALL---AF-------------GLAL---RAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCc--cchhH-H-H--HHHH---HH-------------hccH---HHHHHHHH
Confidence            488999999999999999999977665321  11100 0 0  0000   00             0111   13567778


Q ss_pred             HHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHH--hcCCcccccchhhhHHhhhhhhHHHH
Q psy5010          99 GFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASY--WYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus        99 ~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~--~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      +.++++..+ ..+++.++.....+-...++...+.++.  +|||++|+.+++|+++++.|+++.+.
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            888888776 5788888877777667777777777775  89999999999999999999988664

>KOG2234|consensus

Probab=98.70  E-value=1.9e-07  Score=76.08  Aligned_cols=149  Identities=13%  Similarity=0.217  Sum_probs=112.5

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHH--hcccccccchhhh
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV--QDYADLNTAYFWL   90 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~   90 (178)
                      +.+-.+.|....+.+++..++..++.+|.+|+-+.+.+..+.....++.++.+.....+ |.+..  ..+-+.++...|.
T Consensus       177 ~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~G~s~~vw~  255 (345)
T KOG2234|consen  177 SAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFYGYSSIVWL  255 (345)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccccccHHHHH
Confidence            45566899999999999999999999999988777778777777778888777766655 33333  1223456777887


Q ss_pred             HhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          91 FLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        91 ~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      .++..++.|..++...    |+.+...=.....+-.+++++.++.+||-++|....+|..+++.+..+|+..++++
T Consensus       256 vVl~~a~gGLlvs~v~----KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  256 VVLLNAVGGLLVSLVM----KYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHhccchhHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            7777787777666543    33333333333445568899999999999999999999999999999999666655

>KOG2765|consensus

Probab=98.65  E-value=2.1e-07  Score=76.36  Aligned_cols=151  Identities=11%  Similarity=0.142  Sum_probs=109.3

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CCchhHHHHHHhHHHHHHHHHHHHHcCCh-HHHhcccccccchhhhH
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCV--NNEIWLLSYYNNVYSSIILLFVSGLFGEL-KTVQDYADLNTAYFWLF   91 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~--~~~~~~~~~~~~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~   91 (178)
                      +-+..|.++++++++.||+|.++.||...++  ++|--...-|..++..+++.|...+.+-. .+-++   .++......
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~---lP~~~q~~~  319 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE---LPSSTQFSL  319 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc---CCCCceeEe
Confidence            3447899999999999999999999987665  34433334445556666666544432110 00111   123334445


Q ss_pred             hhhhHHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHH
Q psy5010          92 LPIGGLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME  168 (178)
Q Consensus        92 l~~~gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~  168 (178)
                      +++.+.+++++.=..| ++.-.++|+...+--.+.-.++++..+++-+.++|+..++|.+.++.|.+..++..+...+
T Consensus       320 vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~  397 (416)
T KOG2765|consen  320 VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK  397 (416)
T ss_pred             eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence            7788888888884444 6778899999888888888899999999999999999999999999999988887655444

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.64  E-value=9.4e-07  Score=71.58  Aligned_cols=127  Identities=12%  Similarity=0.056  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHHH
Q psy5010          26 IASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYV  105 (178)
Q Consensus        26 ~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~  105 (178)
                      +--++...++++-|+..++.+ .|..+...+...+.+.+.+... .+..+ .    ...+.+.|..++..|++.......
T Consensus         9 ~w~~~~~~~~~~NK~~l~~~~-~P~~~~~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNVFP-YPYFKTLISLAVGSLYCLLSWS-SGLPK-R----LKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhCC-hhHHHHHHHHHHHHHHHHHHHH-hCCCC-C----CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            333444555666677777643 6899999988888776655421 11111 0    112345666677778776444445


Q ss_pred             HHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHH
Q psy5010         106 TTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  159 (178)
Q Consensus       106 ~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~  159 (178)
                      ...+++.+++...+++....|+++.++++++++|+++..++.|..+++.|+.+.
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            557899999999999999999999999999999999999999999999998653

specificities overlap.

>KOG4510|consensus

Probab=98.64  E-value=6.1e-08  Score=76.35  Aligned_cols=143  Identities=13%  Similarity=0.110  Sum_probs=107.2

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhh
Q psy5010          16 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG   95 (178)
Q Consensus        16 ~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   95 (178)
                      -|..|.+.++.+++.-|.-.|+.|+..|+.  +..-...|..+++.+..+..+..-+++    ..|  ++...|+.++..
T Consensus       188 ~~~~gt~aai~s~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~----~lP--~cgkdr~l~~~l  259 (346)
T KOG4510|consen  188 YDIPGTVAAISSVLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIGAV----QLP--HCGKDRWLFVNL  259 (346)
T ss_pred             ccCCchHHHHHhHhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhccce----ecC--ccccceEEEEEe
Confidence            456788888888888888888899987765  444445566666666665555444432    222  345567778889


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          96 GLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        96 gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      |++|+..+....+.+++=-+-..++..+..-+++.++-+++|||.+|+.+|.|+++++.+..+....|.-+
T Consensus       260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence            99999999887776555444456777888999999999999999999999999999999988766655443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.60  E-value=5.8e-07  Score=70.84  Aligned_cols=115  Identities=12%  Similarity=0.031  Sum_probs=89.0

Q ss_pred             HHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHHHH-HHHhh
Q psy5010          33 LYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVT-TLQIK  111 (178)
Q Consensus        33 ~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~i~  111 (178)
                      ...+..|...++ ..++....++....+.+++.+.....   .         +...+......|.++..+.+.. +..++
T Consensus         3 ~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~---~---------~~~~~~~~~~~~~~~~~l~~~~~~~a~~   69 (260)
T TIGR00950         3 TTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR---P---------PLKRLLRLLLLGALQIGVFYVLYFVAVK   69 (260)
T ss_pred             chHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc---c---------CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345666776555 35899999999998888887764432   1         1223444556666666666544 47899


Q ss_pred             ccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010         112 ITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus       112 ~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ++++...+++....|+++.+++.++++|+++..+++|+.+.+.|+.+..
T Consensus        70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            9999999999999999999999999999999999999999999987754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.52  E-value=2.1e-06  Score=69.45  Aligned_cols=129  Identities=15%  Similarity=0.066  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC   98 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~   98 (178)
                      .+++++++++++|+...+..|...++.  +|.....+....+.++++++..    .++.       ....+..++..+ +
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~--~P~~~~~~R~~~a~l~l~~~~~----~~~~-------~~~~~~~~~~~~-l   69 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESL--GPVGGAAMIYSVSGLLLLLTVG----FPRL-------RQFPKRYLLAGG-L   69 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccC--ChHHHHHHHHHHHHHHHHHHcc----cccc-------ccccHHHHHHHh-H
Confidence            467789999999999999999987765  8999999999898888876521    1111       011111222222 3


Q ss_pred             HHHHHH-HHHHHhh----ccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010          99 GFAIGY-VTTLQIK----ITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus        99 ~~~~~~-~~~~~i~----~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      +..... +.+..++    ..++...+++.++.|+++.++++++++|+++..+++|+.+.+.|+.+...
T Consensus        70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            333332 2234443    45677778899999999999999999999999999999999999876543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.46  E-value=5.5e-06  Score=66.07  Aligned_cols=140  Identities=13%  Similarity=0.106  Sum_probs=110.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhh
Q psy5010          16 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG   95 (178)
Q Consensus        16 ~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   95 (178)
                      .+..|++.++.+.+.|+.--.+.|-. ++  .++.++..|..+.+.+++..+....+++.+..+.  .-+++.+..+..+
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~--~~~p~~~~~~~l~   78 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQL--LKQPKTLLMLALT   78 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-cc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH--HhCcHHHHHHHHH
Confidence            34579999999999999988887775 54  3789999999999999998888887776665541  2345566555555


Q ss_pred             HHHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010          96 GLCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus        96 gv~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      +.+- ..|...| |+.+.-..+..|.=-+++|++.+++|.++++|.++..|++...+...||....+
T Consensus        79 a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          79 ALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            5444 3455555 777777777888767899999999999999999999999999999999965443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.44  E-value=6.8e-06  Score=66.56  Aligned_cols=124  Identities=13%  Similarity=0.010  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHH
Q psy5010          21 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  100 (178)
Q Consensus        21 ~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~  100 (178)
                      .+..++++++|+...+..|...++  .+|.....+...++.+.+++...  .+.         .+   +..++..|++..
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~~~l~~~~~--~~~---------~~---~~~~~~~g~~~~   69 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN--MPPLMLAGLRFMLVAFPAIFFVA--RPK---------VP---LNLLLGYGLTIS   69 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhc--CCC---------Cc---hHHHHHHHHHHH
Confidence            356889999999999999987765  58999999998887766655431  110         01   112223344333


Q ss_pred             HHHHH-HHHHhhc-cCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010         101 AIGYV-TTLQIKI-TSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus       101 ~~~~~-~~~~i~~-~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ...+. .+...++ .++...+++.+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus        70 ~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         70 FGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            33332 2345565 466778888899999999999999999999999999999999987654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.41  E-value=4.1e-06  Score=66.21  Aligned_cols=130  Identities=9%  Similarity=0.211  Sum_probs=96.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhc--ccccccchhhhHhhh
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQD--YADLNTAYFWLFLPI   94 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~   94 (178)
                      ...|+++.++++++.++..++.+|.+|+.+.+.+.........+.++.++.....+ ..+..+  +.+.++...|..++.
T Consensus       112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~~~g~f~G~~~~~~~~i~~  190 (244)
T PF04142_consen  112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSD-GSAISESGFFHGYSWWVWIVIFL  190 (244)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccc-ccccccCCchhhcchHHHHHHHH
Confidence            36899999999999999999999999988777888887778888887776654432 222211  112345556665566


Q ss_pred             hHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHH
Q psy5010          95 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV  151 (178)
Q Consensus        95 ~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~l  151 (178)
                      .++.|...++    .+|+.+...=+.......+++.++++++||.++|....+|..+
T Consensus       191 ~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  191 QAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            6666655544    4666666666677777889999999999999999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.26  E-value=1.8e-06  Score=60.84  Aligned_cols=67  Identities=7%  Similarity=0.050  Sum_probs=50.1

Q ss_pred             HHHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhH
Q psy5010          98 CGFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  164 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~  164 (178)
                      .....++..+ ..+++.+ ...+++..-+..+.+++.|+++|||++|+.+++|+.+++.|+...+...+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3334444433 4555544 44556666678899999999999999999999999999999988766543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.22  E-value=9.6e-06  Score=65.60  Aligned_cols=132  Identities=9%  Similarity=0.026  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHH
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG   99 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~   99 (178)
                      |++++++++++|+...+..|+..   +.++.+..  ...++..++........+..       ...+..+..-+..|++=
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPE-------FWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCc-------ccccHHHHHHHHHHHHH
Confidence            68899999999999999999864   33454443  24445554444433322110       01133343334444443


Q ss_pred             HHHHHHHHHHhhccCchhhhhhhc-hhHHHHHHHHHHhcCCcccccc----hhhhHHhhhhhhHHHHHh
Q psy5010         100 FAIGYVTTLQIKITSPLTHNISGT-AKACAQTVIASYWYNEVKPFLW----WVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus       100 ~~~~~~~~~~i~~~~~~~~sv~~~-l~~v~~~i~g~~~f~e~~t~~~----~iG~~lil~g~~l~~~~k  163 (178)
                      ...+++.+.++++.+....-.+.+ +.++..+++|.++|||+.+..+    ++|.++++.|+++....+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            334456667889888766655555 7888999999999999999999    999999999998876654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00688 rarD rarD protein

Probab=98.16  E-value=3.7e-05  Score=60.72  Aligned_cols=106  Identities=11%  Similarity=0.080  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHH
Q psy5010          22 VYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFA  101 (178)
Q Consensus        22 ~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~  101 (178)
                      .+++.+++++|.|.+..||..++   ++.+.... .....+...+.....+. ++.   ++..+...|.+++..|++ +.
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~l~~~g~~-t~  219 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDF-ATV---QQTNPFPIWLLLVLAGLI-TG  219 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhcc-Ccc---cccCchhHHHHHHHHHHH-HH
Confidence            36788999999999999996442   22232221 22222222222211111 100   000112367777778877 55


Q ss_pred             HHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHh
Q psy5010         102 IGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYW  136 (178)
Q Consensus       102 ~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~  136 (178)
                      +.|..+ ..+++.+|.+.++..+++|+++.++|++.
T Consensus       220 i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       220 TPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            666665 78999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.16  E-value=2.5e-05  Score=63.45  Aligned_cols=131  Identities=12%  Similarity=0.146  Sum_probs=95.9

Q ss_pred             HHHHHHHHHhhhcCCCCCc--hhHHHHHHhHHHHHHHHHHHHHcC-ChHHHhcccccccchhhhHhhhhHHHHHHHHHHH
Q psy5010          30 SLALYSIHTKKVLPCVNNE--IWLLSYYNNVYSSIILLFVSGLFG-ELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVT  106 (178)
Q Consensus        30 ~~a~~~i~~kk~~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~  106 (178)
                      ++..+.+.+++..++...+  |..+++-+...+.+...+.....+ +.         .+...+......+++-+....+.
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---------SRKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---------CCcChHHHHHHHHHHHHHHHHHH
Confidence            4455678888876654434  778888888877777666655444 11         11112222344555555555666


Q ss_pred             HHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHHHHH
Q psy5010         107 TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEA  169 (178)
Q Consensus       107 ~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~~~~  169 (178)
                      ..+++.++..+..+.-..+++..+++|+++++++.+..++++..++..|+.++...+.++++.
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            788899999999999999999999999999999999999999999999999988876554443

; GO: 0055085 transmembrane transport

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.15  E-value=7.6e-05  Score=59.06  Aligned_cols=140  Identities=16%  Similarity=0.117  Sum_probs=96.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhH
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      ...+..+.+..++.++......|+..++ ..++..........+.+...+.....  .....     .....+......+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~   76 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLE--PRGLR-----PALRPWLLLLLLA   76 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhh--ccccc-----ccccchHHHHHHH
Confidence            4578888889999999999999997665 23555665656666655533222211  10000     1111123344555


Q ss_pred             HHHHHHHHHH-HHHhhccCchhhhhhhchhHHHHHHHHH-HhcCCcccccchhhhHHhhhhhhHHHHHhH
Q psy5010          97 LCGFAIGYVT-TLQIKITSPLTHNISGTAKACAQTVIAS-YWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  164 (178)
Q Consensus        97 v~~~~~~~~~-~~~i~~~~~~~~sv~~~l~~v~~~i~g~-~~f~e~~t~~~~iG~~lil~g~~l~~~~k~  164 (178)
                      .+........ +..++++++...+......|++.+++++ ++++|+++..++.|..+.+.|+++......
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            5555555444 4679999999999999999999999996 777999999999999999999987665443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.08  E-value=1.7e-05  Score=55.17  Aligned_cols=63  Identities=11%  Similarity=-0.013  Sum_probs=49.7

Q ss_pred             HHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          98 CGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ++..+.+..+ ..+++.+.......-.+.++.++++|+++|||++|+.+++|+++++.|+.+..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4444444444 56777776666665668999999999999999999999999999999987643

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.05  E-value=5.2e-05  Score=62.49  Aligned_cols=138  Identities=12%  Similarity=0.103  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHH
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG   99 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~   99 (178)
                      |-++++..+........+.++   +.+ .|..+.+.+...-.++..+.........+...    .....|+..++.|++=
T Consensus        18 gQ~lsl~~~~t~~~s~~l~~~---~~~-~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~----~~~~~~w~y~lla~~D   89 (334)
T PF06027_consen   18 GQVLSLCITGTGTFSSLLANK---GVN-IPTFQSFFNYVLLALVYTPILLYRRGFKKWLK----VLKRPWWKYFLLALLD   89 (334)
T ss_pred             HHHHHHHHHhHHHHHHHHHhc---Ccc-CcHHHHHHHHHHHHHHHhhhhhhccccccchh----hcchhHHHHHHHHHHH
Confidence            444444444444444444444   222 35555555555544444454443322111111    1123444566678888


Q ss_pred             HHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHH
Q psy5010         100 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  165 (178)
Q Consensus       100 ~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~  165 (178)
                      ...|+....+.++++-+...+......+++.++|+++++++.++.+++|..++++|+.+.......
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            888999889999999999999999999999999999999999999999999999999876666543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=98.01  E-value=9.1e-05  Score=51.35  Aligned_cols=53  Identities=11%  Similarity=0.078  Sum_probs=44.4

Q ss_pred             HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010         108 LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus       108 ~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ..+|+.+ .+.+++..-+..+.+++.|+++|||++|+.+++|+++++.|+...+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4555554 5567777778889999999999999999999999999999998653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.93  E-value=2.1e-05  Score=54.69  Aligned_cols=66  Identities=3%  Similarity=0.047  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          97 LCGFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        97 v~~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      +.+...++..+ .++++.+ ...+++..-+..+.+++.|+++|||++|+.+++|+.+++.|+.+.+..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34444444433 4566655 455666677788999999999999999999999999999999987654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.90  E-value=0.00063  Score=54.96  Aligned_cols=105  Identities=14%  Similarity=-0.006  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      ..|+.+.+++.++++......|...++  .+|.+...+.+.++.++++++......         ..+.+.|...+..|.
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~--~~~~~~~~~R~~~a~l~l~~~~~~~~~---------~~~~~~~~~~~~~g~   79 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPL--VGAPGVTALRLALGTLILIAIFKPWRL---------RFAKEQRLPLLFYGV   79 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHhHHhc---------cCCHHHHHHHHHHHH
Confidence            579999999999999999999988775  489999999999999888776432111         012234434445555


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHH
Q psy5010          98 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIA  133 (178)
Q Consensus        98 ~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g  133 (178)
                      +....++..+..++++++...++.....|+++.+++
T Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~  115 (293)
T PRK10532         80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS  115 (293)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence            544445555678899988888888888898887776

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.85  E-value=5.8e-05  Score=51.81  Aligned_cols=64  Identities=11%  Similarity=0.200  Sum_probs=51.7

Q ss_pred             HHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          99 GFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        99 ~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      +...+|... ..+|+.+ .+.+++..-...+.+++.|+++|||++|+.+++|+.+++.|+...+..
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            333444443 5667655 667888889999999999999999999999999999999999876543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.78  E-value=8e-05  Score=51.31  Aligned_cols=64  Identities=8%  Similarity=0.010  Sum_probs=50.7

Q ss_pred             HHHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHH
Q psy5010          98 CGFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  161 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~  161 (178)
                      .+...++... ..+|+.+ .+.+++..-+..+.+++.|+++|||++|+.+++|+.+++.|+...+.
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            3334444333 4566655 56788888899999999999999999999999999999999987643

>KOG4510|consensus

Probab=97.76  E-value=7.1e-06  Score=64.90  Aligned_cols=130  Identities=12%  Similarity=0.051  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC   98 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~   98 (178)
                      .|..+..++ ..+...+++.+|....   +|.++.....+.-+....|..+.....  .+     .+...-.++++-|++
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~--v~-----gp~g~R~~LiLRg~m  106 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQP--VI-----GPEGKRKWLILRGFM  106 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeee--ee-----cCCCcEEEEEeehhh
Confidence            577777777 6666667777776553   566666555333333333333332221  11     111122245667777


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHH
Q psy5010          99 GFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  159 (178)
Q Consensus        99 ~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~  159 (178)
                      |+..-+..|++..+.+-....++....|+++++++|.+++|+.|....+|..+.+.|+.+.
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLI  167 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLI  167 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEE
Confidence            7777777788888888788888999999999999999999999999999999999999763

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.68  E-value=0.0014  Score=47.28  Aligned_cols=130  Identities=15%  Similarity=0.154  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHH
Q psy5010          21 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  100 (178)
Q Consensus        21 ~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~  100 (178)
                      .++++.+-.+.++....--++.++.+ ||+...+.+...+.+.+..+....++. +..+    .....| +....|++|-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~----~~~~p~-w~~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLAS----LSSVPW-WAYLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccch----hccCCh-HHhccHHHHH
Confidence            45677777777777777777666554 699999999999999998888877654 2221    111223 2344788888


Q ss_pred             HHHHHHHHHhhccCchhhhhhhchhHH-HHHHHHHH----hcCCcccccchhhhHHhhhhhh
Q psy5010         101 AIGYVTTLQIKITSPLTHNISGTAKAC-AQTVIASY----WYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus       101 ~~~~~~~~~i~~~~~~~~sv~~~l~~v-~~~i~g~~----~f~e~~t~~~~iG~~lil~g~~  157 (178)
                      ..-++....+.+.++...........+ .+.++.-+    .-++++++.+++|.++++.|+.
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            777887788999998888776544443 34444443    2235899999999999999975

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.62  E-value=0.0012  Score=54.58  Aligned_cols=139  Identities=16%  Similarity=0.044  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHH--HHHHHHH-HcCChHHHhcccccccchhhhHhhh
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSI--ILLFVSG-LFGELKTVQDYADLNTAYFWLFLPI   94 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~--~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~   94 (178)
                      ..|+++.+++++|++.+.+-.|| .++   -++|.. |- ..+..  ++.|... ..++ +++.+.-...++..+..-++
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v~gi~~wl~~~~~~g~~~~-~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-VGGIFSWLILPWLIAALLL-PDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-HHHHHHHHHHHHHHHHHHh-hhHHHHHHhcCHHHHHHHHH
Confidence            46999999999999999999998 443   456665 43 22221  1222111 1111 22222112245556666666


Q ss_pred             hHHHHHHHHHHHHHHhhccCc-hhhhhhhchhHHHHHHHHHHhcCCcc---cc----cchhhhHHhhhhhhHHHHHh
Q psy5010          95 GGLCGFAIGYVTTLQIKITSP-LTHNISGTAKACAQTVIASYWYNEVK---PF----LWWVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus        95 ~gv~~~~~~~~~~~~i~~~~~-~~~sv~~~l~~v~~~i~g~~~f~e~~---t~----~~~iG~~lil~g~~l~~~~k  163 (178)
                      .|++=...+...+..+++.|- .+..+..-+.-+..++++.+++||.-   +.    ...+|.++++.|+.+-+++-
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            776665666666677777663 23333334577899999999999753   22    36788899999998888753

>KOG3912|consensus

Probab=97.55  E-value=0.00045  Score=55.23  Aligned_cols=147  Identities=16%  Similarity=0.083  Sum_probs=103.8

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHH---Hhcccccccchhhh-
Q psy5010          15 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKT---VQDYADLNTAYFWL-   90 (178)
Q Consensus        15 ~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~-   90 (178)
                      +--..|+++.+++-+..|...++-+|.+++++++|.+...|..+++.+++..+.....-.+.   ....+ +-..+.|. 
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~-~g~~eD~~~  250 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNP-RGVLEDWGD  250 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCC-CcchhhHHH
Confidence            33367999999999999999999999999889999999999999997765544432211110   00000 00011111 


Q ss_pred             --------HhhhhHHHHHHHHHHHH-----HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhh
Q psy5010          91 --------FLPIGGLCGFAIGYVTT-----LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus        91 --------~l~~~gv~~~~~~~~~~-----~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~  157 (178)
                              -.++.+..++......|     ..-|..|+++=.+.-.++..+.=+++..+..|.++..|+.|-++.+.|.+
T Consensus       251 ~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~  330 (372)
T KOG3912|consen  251 AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGII  330 (372)
T ss_pred             HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    11233344444433322     24578899999999999998888888888899999999999999999999


Q ss_pred             HHHHH
Q psy5010         158 AYTFV  162 (178)
Q Consensus       158 l~~~~  162 (178)
                      +|+-.
T Consensus       331 lY~~i  335 (372)
T KOG3912|consen  331 LYNQI  335 (372)
T ss_pred             HHHHH
Confidence            98754

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.55  E-value=0.00011  Score=58.08  Aligned_cols=80  Identities=10%  Similarity=0.090  Sum_probs=70.7

Q ss_pred             hhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          87 YFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        87 ~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      +....+...+++=...|...|..++..+|.++.+....|.+++.++++++++.+++..||+++.+.+.|+.+........
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            34456778888888888998999999999999999999999999999999999999999999999999998876655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.52  E-value=0.0015  Score=52.27  Aligned_cols=127  Identities=12%  Similarity=0.028  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      ..|+...+++.+.|..|....|-.    +.|++....=++.--.+.-+.+....++  +.      .+...|. -++.|+
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~------~~k~~~~-nil~G~  203 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKK--PF------FEKKSWK-NILTGL  203 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccc--cc------cccchHH-hhHHHH
Confidence            459999999999999999997773    3467777665543322222222222211  11      1223343 344555


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCccccc----chhhhHHhhhhhh
Q psy5010          98 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFL----WWVSNWVVLFGSA  157 (178)
Q Consensus        98 ~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~----~~iG~~lil~g~~  157 (178)
                      +=...|.+.+...++.|..+.-..+-+..+++++.|++++||+=+..    .++|.++++.|..
T Consensus       204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            54455666677888899888888888899999999999999987766    5567777777764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.43  E-value=0.00081  Score=53.76  Aligned_cols=115  Identities=7%  Similarity=-0.061  Sum_probs=72.5

Q ss_pred             chhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhh-chhH
Q psy5010          48 EIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISG-TAKA  126 (178)
Q Consensus        48 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~-~l~~  126 (178)
                      +|.+.+.-..+-+.++-+...++.+...       ..+...+..-+++|++=...+...|...++.|-.++-.++ -+.-
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~-------~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QL   83 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAF-------SMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQL   83 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence            5667666665555555554444432210       0123455556677776666666666666666654444444 2466


Q ss_pred             HHHHHHHHHhcCCcccccchh----hhHHhhhhhhHHHHHhHHHHHH
Q psy5010         127 CAQTVIASYWYNEVKPFLWWV----SNWVVLFGSAAYTFVKQREMEA  169 (178)
Q Consensus       127 v~~~i~g~~~f~e~~t~~~~i----G~~lil~g~~l~~~~k~~~~~~  169 (178)
                      +.++++|+++|||.-+..+++    ++++++.|+.+-++.++++++.
T Consensus        84 vg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~  130 (269)
T PF06800_consen   84 VGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKS  130 (269)
T ss_pred             HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            778999999999987766544    6788999998877766555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.08  E-value=0.0014  Score=43.98  Aligned_cols=55  Identities=11%  Similarity=0.301  Sum_probs=29.7

Q ss_pred             HHHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHh
Q psy5010          98 CGFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVV  152 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~li  152 (178)
                      .+...++..+ .++|+.+ .+.+++..-+..+.+++.|+++|||++|+.+++|+.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3444454444 4566655 34456666788899999999999999999999998765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.06  E-value=0.00019  Score=56.31  Aligned_cols=138  Identities=7%  Similarity=-0.022  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC   98 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~   98 (178)
                      .+++.+++-++.|....+...|..    -+|.+.+.-..+-+.++-+.+..+..+         ..+...+..-+++|.+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p---------~~T~~~~iv~~isG~~   68 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSP---------ELTLTIFIVGFISGAF   68 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecC---------ccchhhHHHHHHhhhH
Confidence            457788889999988887777743    257777776666666665555444321         1233344444555555


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhh-chhHHHHHHHHHHhcCCcccccch-h---hhHHhhhhhhHHHHHhHHHHHH
Q psy5010          99 GFAIGYVTTLQIKITSPLTHNISG-TAKACAQTVIASYWYNEVKPFLWW-V---SNWVVLFGSAAYTFVKQREMEA  169 (178)
Q Consensus        99 ~~~~~~~~~~~i~~~~~~~~sv~~-~l~~v~~~i~g~~~f~e~~t~~~~-i---G~~lil~g~~l~~~~k~~~~~~  169 (178)
                      =...+...|..++..|...+..++ -..-+-++++|++.|||.-++.+. +   .+++++.|.++-++.++.+|+.
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~  144 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE  144 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc
Confidence            444555566665555544333333 246788999999999998887754 3   4678889988877766544443

>KOG2766|consensus

Probab=97.04  E-value=0.00036  Score=55.11  Aligned_cols=134  Identities=12%  Similarity=0.043  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhh-H
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG-G   96 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g   96 (178)
                      ..|++++++.+-+||..++.-....++.  +..+.+....++++++-.+-.++.  ..+...  -+|+   |-...+. .
T Consensus       165 ~~GD~lvi~GATlYaVSNv~EEflvkn~--d~~elm~~lgLfGaIIsaIQ~i~~--~~~~~t--l~w~---~~i~~yl~f  235 (336)
T KOG2766|consen  165 VKGDFLVIAGATLYAVSNVSEEFLVKNA--DRVELMGFLGLFGAIISAIQFIFE--RHHVST--LHWD---SAIFLYLRF  235 (336)
T ss_pred             ccCcEEEEecceeeeeccccHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHhhh--ccceee--Eeeh---HHHHHHHHH
Confidence            4799999999999999999988877754  678888888888887776653332  111111  0122   2111121 1


Q ss_pred             HHHHHHHHHHH-HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          97 LCGFAIGYVTT-LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        97 v~~~~~~~~~~-~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      .+..++-|+.. ..+|.+|++.+++--...+..+.++  ..||-++++.-.+.-+.+..|.++|+..
T Consensus       236 ~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  236 ALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            12222223332 3578899999988777777888777  7788889999999999999999999654

>KOG2234|consensus

Probab=96.94  E-value=0.035  Score=45.82  Aligned_cols=139  Identities=9%  Similarity=0.033  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCC--CCCchhHHHHHHhHHHHHHHHHHHHHcCCh--HH-Hhccc-cc-ccchhhhHhhh
Q psy5010          22 VYGVIASASLALYSIHTKKVLPC--VNNEIWLLSYYNNVYSSIILLFVSGLFGEL--KT-VQDYA-DL-NTAYFWLFLPI   94 (178)
Q Consensus        22 ~~~l~s~~~~a~~~i~~kk~~~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~--~~-~~~~~-~~-~~~~~~~~l~~   94 (178)
                      +..+.-.+..+.+....|...++  .+..|.+..+-.-.+-.+++....+.+...  .. ..... .. ..+..-..+..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            34444455556666666654332  234566666666666666666665554211  11 11100 01 12323334666


Q ss_pred             hHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          95 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        95 ~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      .+.+=...|...|......+|+++.+...+|...+.++++++++++++..||....+-..|+.+.+
T Consensus        98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            777777888777788999999999999999999999999999999999999999999999998776

>KOG4314|consensus

Probab=96.46  E-value=0.016  Score=44.30  Aligned_cols=144  Identities=14%  Similarity=0.082  Sum_probs=84.8

Q ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHH----HHH-HHHHcCChHHHhcccccccch
Q psy5010          13 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSII----LLF-VSGLFGELKTVQDYADLNTAY   87 (178)
Q Consensus        13 ~~~~~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~----l~~-~~~~~~~~~~~~~~~~~~~~~   87 (178)
                      +..-++.|+.+++.|++..|+|.+..|+..-+-+..  +...+.+..+..=    .+| +.+.....++..    ++...
T Consensus       129 ~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q----sFA~~  202 (290)
T KOG4314|consen  129 EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ----SFAAA  202 (290)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH----HHhhC
Confidence            555679999999999999999999999986543211  2222222222211    111 111111222222    12344


Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          88 FWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        88 ~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      .|+.++..+.+..+.|+..-..+..+.|.-.|+=....-..-+.+..++-+-..+.....|..++..|.++....
T Consensus       203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            677777777777777766555566666766664322222333455555444477888889999999998765543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.26  E-value=0.078  Score=38.76  Aligned_cols=137  Identities=15%  Similarity=0.096  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      +...+..+.+-.+-....-.--++.+..+ +|.--...+...+...+..+....++.++...    -....| +....|+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~----~~~~pw-W~~~GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAA----VASAPW-WAWIGGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh----ccCCch-HHHHccc
Confidence            45566777777777777666666544443 68888888888888888888777544332210    111223 2344567


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhc-hhHHHHHHHHHHhcC----CcccccchhhhHHhhhhhhHHH
Q psy5010          98 CGFAIGYVTTLQIKITSPLTHNISGT-AKACAQTVIASYWYN----EVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        98 ~~~~~~~~~~~~i~~~~~~~~sv~~~-l~~v~~~i~g~~~f~----e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      +|-..-++......+.+++++..... -.-+.+.++.-+=+.    .++|...++|+++++.|.++..
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            77655555556677777766655443 233444444444322    3699999999999999965443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.09  E-value=0.0072  Score=49.25  Aligned_cols=117  Identities=14%  Similarity=0.082  Sum_probs=77.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhH
Q psy5010          17 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG   96 (178)
Q Consensus        17 ~~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   96 (178)
                      ...|..+++.++++.+.-..++||...+.+.++..-.                  .+..+..     -++..|..++ .-
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------------------~~~~~~l-----~~~~W~~G~~-~~   60 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------------------SGGRSYL-----RRPLWWIGLL-LM   60 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------------------chhhHHH-----hhHHHHHHHH-HH
Confidence            4579999999999999999999997544321111100                  0000010     1121222222 22


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHH
Q psy5010          97 LCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  160 (178)
Q Consensus        97 v~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~  160 (178)
                      ..|-..+   +.+....++.-++..+.+.-+...+++-++++|+++...+.|.++++.|..+..
T Consensus        61 ~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   61 VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            2333333   345666677778888888889999999999999999999999999999986643

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.70  E-value=0.24  Score=40.94  Aligned_cols=144  Identities=16%  Similarity=0.102  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHH
Q psy5010          18 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL   97 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv   97 (178)
                      ..|+++..+.+++.+.+.+=.||. |+   -++|...-..-+-.-+.+|.....-+.|++.+.-...+.+.+....+.|+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-k~---WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-KG---WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-CC---ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            579999999999999999998986 43   35666544333222334454432222333322211223233332222221


Q ss_pred             HHHHHHHHHH-HHhhccC-chhhhhhhchhHHHHHHHHHHhcC-------CcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          98 CGFAIGYVTT-LQIKITS-PLTHNISGTAKACAQTVIASYWYN-------EVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        98 ~~~~~~~~~~-~~i~~~~-~~~~sv~~~l~~v~~~i~g~~~f~-------e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      + ..+.=..| ..+++.+ ++..++.--+..++.+++-.++.+       ++-....++|.++++.|+..-.++-..|
T Consensus        82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            1 01111222 3455555 344444444455555666544432       2223458899999999998877775433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.54  E-value=0.011  Score=46.90  Aligned_cols=133  Identities=17%  Similarity=0.218  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHH
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG   99 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~   99 (178)
                      |++.+++|++++...-+=.||. +..  |++-.+.+......+.-+.+.+..+ .+.           ++.+-.+.|.+=
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~-~p~-----------f~p~amlgG~lW   65 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DTG--DGFFFQWVMCSGIFLVGLVVNLILG-FPP-----------FYPWAMLGGALW   65 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cCC--CcHHHHHHHHHHHHHHHHHHHHhcC-CCc-----------ceeHHHhhhhhh
Confidence            6788899999999888888885 322  5655555443333332232222222 111           111122222222


Q ss_pred             HHHHHHHHHHhhccC-chhhhhhhchhHHHHHHHHHH-hcCCc-----ccccchhhhHHhhhhhhHHHHHhHHHH
Q psy5010         100 FAIGYVTTLQIKITS-PLTHNISGTAKACAQTVIASY-WYNEV-----KPFLWWVSNWVVLFGSAAYTFVKQREM  167 (178)
Q Consensus       100 ~~~~~~~~~~i~~~~-~~~~sv~~~l~~v~~~i~g~~-~f~e~-----~t~~~~iG~~lil~g~~l~~~~k~~~~  167 (178)
                      ...|....-.++..| +.-..+.+..+-+..=..|-+ +|+++     -++.+++|.++++.|..+|.+-|.+++
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            222333333444444 222333333333443333322 45442     445699999999999999988776653

The region concerned is approximately 280 residues long.

>KOG1441|consensus

Probab=94.87  E-value=0.06  Score=44.20  Aligned_cols=124  Identities=10%  Similarity=-0.012  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHhhhcC--CCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHHHHHHHH
Q psy5010          27 ASASLALYSIHTKKVLP--CVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGY  104 (178)
Q Consensus        27 s~~~~a~~~i~~kk~~~--~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~  104 (178)
                      .-++....+++-|+.++  +.+ -|+.++......+...+...... +..+    .++..+...|..++-.|++.+....
T Consensus        25 w~~~~v~~~~~nK~il~~~~f~-~p~~lt~~~~~~~~l~~~v~~~l-~~~~----~~~~~~~~~~~~llpl~~~~~~~~v   98 (316)
T KOG1441|consen   25 WYVLSVGVIILNKYILSKYGFP-FPITLTMLHLFCGALALLVIKVL-KLVP----PSKISSKLPLRTLLPLGLVFCISHV   98 (316)
T ss_pred             HhhhheeeEEeeHhhhccCCCC-CccHHHHHHHHHHHHHHHHHHHh-cCCC----CCccccccchHHHHHHHHHHHHHHH
Confidence            33334445566677777  443 35555555444444444333222 2111    0111133455556666766665555


Q ss_pred             HHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhh
Q psy5010         105 VTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGS  156 (178)
Q Consensus       105 ~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~  156 (178)
                      .....+++++-..+.++.+++|+++.++++++.+|..+...+..+..+..|+
T Consensus        99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV  150 (316)
T KOG1441|consen   99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGV  150 (316)
T ss_pred             hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeE
Confidence            5556788999999999999999999999999999998876655555555554

>KOG2765|consensus

Probab=92.57  E-value=0.08  Score=44.16  Aligned_cols=74  Identities=12%  Similarity=0.055  Sum_probs=61.6

Q ss_pred             hhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          93 PIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        93 ~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      +..+.+=|+-+|+.-.+++.++....++++.....++.++|..+-+|++|....++..+.+.|+++.+..+.++
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            34455556666665568999999999999999999999999999999999999999999999998877665443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.45  E-value=0.31  Score=33.92  Aligned_cols=37  Identities=16%  Similarity=0.104  Sum_probs=32.0

Q ss_pred             hchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhH
Q psy5010         122 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAA  158 (178)
Q Consensus       122 ~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l  158 (178)
                      +.+.-+++.+.|+++.+|..+...++|+.+++.|+.+
T Consensus        75 Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   75 NSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             hHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4567789999999988888899999999999999753

Many members are annotated as potential transmembrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.29  E-value=5.9  Score=33.04  Aligned_cols=140  Identities=10%  Similarity=0.015  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHHHHH-------HHHhhhcCCCCCchhHHHHHHhH---HHHHHH-HHHHHH---c-CChHHHhcccc
Q psy5010          18 ISGTVYGVIASASLALYS-------IHTKKVLPCVNNEIWLLSYYNNV---YSSIIL-LFVSGL---F-GELKTVQDYAD   82 (178)
Q Consensus        18 ~~G~~~~l~s~~~~a~~~-------i~~kk~~~~~~~~~~~~~~~~~~---~a~~~l-~~~~~~---~-~~~~~~~~~~~   82 (178)
                      -.|++.++++.+.+++|+       ...+.. .+.+.++.....-+..   .+..+. +..+..   . ++.+...+.  
T Consensus       173 ~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~--  249 (345)
T PRK13499        173 KKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF--  249 (345)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc--
Confidence            469999999999999999       433332 1123344433322322   222211 111121   1 111101111  


Q ss_pred             ccc----chhhhHhhhhHHHHHHHHHHHHHHhhccCchhhh----hhhchhHHHHHHHHHHhcCCccc------ccchhh
Q psy5010          83 LNT----AYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHN----ISGTAKACAQTVIASYWYNEVKP------FLWWVS  148 (178)
Q Consensus        83 ~~~----~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~s----v~~~l~~v~~~i~g~~~f~e~~t------~~~~iG  148 (178)
                      ..+    ...+....+.|++=...+++..+.-++.+.....    +-..+.-+++++.|+ ++||.=+      ...++|
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            011    1122222333333333334434555555433222    222556689999998 5999877      457899


Q ss_pred             hHHhhhhhhHHHH
Q psy5010         149 NWVVLFGSAAYTF  161 (178)
Q Consensus       149 ~~lil~g~~l~~~  161 (178)
                      .++++.|..+..+
T Consensus       329 ~vliI~g~~lig~  341 (345)
T PRK13499        329 CVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999877554

>KOG4314|consensus

Probab=90.18  E-value=0.18  Score=38.73  Aligned_cols=61  Identities=11%  Similarity=0.033  Sum_probs=52.9

Q ss_pred             HHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHh
Q psy5010         103 GYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus       103 ~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k  163 (178)
                      ||.....+++.+|+..+-+..-+..+.-+++|+.++|.+....++...+.++|+...++..
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            5665578999999999999999999999999999999999999999999999987666543

>KOG3912|consensus

Probab=89.42  E-value=2.1  Score=34.80  Aligned_cols=64  Identities=16%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             hHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhH
Q psy5010          95 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAA  158 (178)
Q Consensus        95 ~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l  158 (178)
                      .+++-....-..|-.+..++++.+.|.--.-.+++-+++..+++.+++..||+|+..+.+|+..
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlvi  155 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVI  155 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhe
Confidence            4444444445555567778888888776666788899999999999999999999999999854

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=88.86  E-value=0.65  Score=37.87  Aligned_cols=82  Identities=10%  Similarity=0.037  Sum_probs=48.6

Q ss_pred             cchhhhHhhhhHHHHHHHHHHHHHHhhccCchhhhhhhc-hhHHHHHHHHHHhcCCc--cccc----chhhhHHhhhhhh
Q psy5010          85 TAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGT-AKACAQTVIASYWYNEV--KPFL----WWVSNWVVLFGSA  157 (178)
Q Consensus        85 ~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~-l~~v~~~i~g~~~f~e~--~t~~----~~iG~~lil~g~~  157 (178)
                      ++..|..++....+....-+..-.++++.+++.+..+.+ .=...+++-|..+|+|.  .++.    ...|..+++.|++
T Consensus       209 ~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~  288 (300)
T PF05653_consen  209 YPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVF  288 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhh
Confidence            344565444433333333344445777777655444432 23467788888899984  5553    4567788999998


Q ss_pred             HHHHHhHHH
Q psy5010         158 AYTFVKQRE  166 (178)
Q Consensus       158 l~~~~k~~~  166 (178)
                      +.+..|+.|
T Consensus       289 lL~~~~~~~  297 (300)
T PF05653_consen  289 LLSSSKDKE  297 (300)
T ss_pred             eeeccCchh
Confidence            876654433

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=87.25  E-value=0.05  Score=42.99  Aligned_cols=131  Identities=15%  Similarity=0.022  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHhhhhHHH
Q psy5010          19 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC   98 (178)
Q Consensus        19 ~G~~~~l~s~~~~a~~~i~~kk~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~   98 (178)
                      .|....+.|.+.|..|.+..+...    .+.+....-+..-..+.-+.+....+|..        .+...|. -.+.|++
T Consensus       152 kgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqAiGMv~~ali~~~~~~~~~--------~~K~t~~-nii~G~~  218 (288)
T COG4975         152 KGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQAIGMVIGALILGFFKMEKR--------FNKYTWL-NIIPGLI  218 (288)
T ss_pred             hheeeeeeeccceeeeEeeecccc----ccchhhhhHHHHHHHHHHHHHhhcccccc--------hHHHHHH-HHhhHHH
Confidence            488888889999999988877642    34444443333322222223333333221        1233443 3445555


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccc----hhhhHHhhhhhhHHHHH
Q psy5010          99 GFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLW----WVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        99 ~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~----~iG~~lil~g~~l~~~~  162 (178)
                      =-..|...+.+-++.+-.+-=-.+-+.-+++++-|+++++|+-|..+    ++|+.+++.|..+....
T Consensus       219 Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~  286 (288)
T COG4975         219 WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA  286 (288)
T ss_pred             HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence            55566776666666664333334455668899999999999988875    56777888877665543

>KOG1580|consensus

Probab=87.18  E-value=0.72  Score=36.47  Aligned_cols=57  Identities=7%  Similarity=0.180  Sum_probs=44.1

Q ss_pred             HHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhH
Q psy5010         108 LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  164 (178)
Q Consensus       108 ~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~  164 (178)
                      .+++.++=-+.-+-..-||+-.+++|+++.+.+-++....=...|+.|+.++.+...
T Consensus       104 ~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen  104 QALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             chhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence            455555433333333679999999999999999999999999999999998887533

>KOG1581|consensus

Probab=86.36  E-value=8.2  Score=31.63  Aligned_cols=139  Identities=7%  Similarity=0.099  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC-CCC------CchhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccccccchhhhHh
Q psy5010          20 GTVYGVIASASLALYSIHTKKVLP-CVN------NEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL   92 (178)
Q Consensus        20 G~~~~l~s~~~~a~~~i~~kk~~~-~~~------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (178)
                      ..++...=-..+-.+.+++.|+.. .++      .++.-+.+-|.+.+.+.-....-.+. .+       ......|.-.
T Consensus        15 L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k-~~-------~~~~apl~~y   86 (327)
T KOG1581|consen   15 LVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWK-KE-------LSGVAPLYKY   86 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccc-cc-------CCCCCchhHH
Confidence            333333334445566677777542 221      35556666677766665533222111 00       0112233334


Q ss_pred             hhhHHHHHHHHHHHHHHhhccCchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHhHHH
Q psy5010          93 PIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  166 (178)
Q Consensus        93 ~~~gv~~~~~~~~~~~~i~~~~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k~~~  166 (178)
                      ...++..+.-..+.+-++|++|=-+..+.-.-|-+..+++|.++.+.+.++...+=..++-.|+..++..+..+
T Consensus        87 ~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   87 SLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             hHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            45555666556777788999998888888888999999999999999999999999999999998888776554

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.68  E-value=5.9  Score=26.89  Aligned_cols=65  Identities=11%  Similarity=0.065  Sum_probs=41.7

Q ss_pred             hhHHHHHHHHHHHHHHh---hccCchhhhhh--hchhHHH----HHHHHHHhcCCcccccchhhhHHhhhhhhH
Q psy5010          94 IGGLCGFAIGYVTTLQI---KITSPLTHNIS--GTAKACA----QTVIASYWYNEVKPFLWWVSNWVVLFGSAA  158 (178)
Q Consensus        94 ~~gv~~~~~~~~~~~~i---~~~~~~~~sv~--~~l~~v~----~~i~g~~~f~e~~t~~~~iG~~lil~g~~l  158 (178)
                      ...+.+..++++.|...   .++|-..++..  ..+..+.    -..+|+++++||+.+..+.|..++++|+++
T Consensus        39 ~~i~~SWGIA~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f  112 (116)
T COG3169          39 IVILASWGIAFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF  112 (116)
T ss_pred             HHHHHHhhHHHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence            34445666677766432   34443333322  2233333    356789999999999999999999988853

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=83.30  E-value=3.6  Score=28.22  Aligned_cols=30  Identities=7%  Similarity=0.047  Sum_probs=26.0

Q ss_pred             HHHHHHHHhcCCcccccchhhhHHhhhhhh
Q psy5010         128 AQTVIASYWYNEVKPFLWWVSNWVVLFGSA  157 (178)
Q Consensus       128 ~~~i~g~~~f~e~~t~~~~iG~~lil~g~~  157 (178)
                      +=+.+++++++|++++....|.++++++++
T Consensus        75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~  104 (108)
T PF04342_consen   75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVY  104 (108)
T ss_pred             eeHHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence            336778999999999999999999988875

>KOG1444|consensus

Probab=80.07  E-value=32  Score=28.31  Aligned_cols=115  Identities=17%  Similarity=0.203  Sum_probs=70.1

Q ss_pred             HHhhhcCCCCCc-hhHHHHHHhHHHHHHHHHHHHHcCChHHHhcccc--cccchhhhHhhhhHHHHHHHHHHHHHHhhcc
Q psy5010          37 HTKKVLPCVNNE-IWLLSYYNNVYSSIILLFVSGLFGELKTVQDYAD--LNTAYFWLFLPIGGLCGFAIGYVTTLQIKIT  113 (178)
Q Consensus        37 ~~kk~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gv~~~~~~~~~~~~i~~~  113 (178)
                      .-|.....++.+ ...++.+|++.+.+.+...-...     +.++++  .-.++.|.   -..++-.+.-++.-..++..
T Consensus        30 vNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-----lv~~~~l~~~~~kk~~---P~~~lf~~~i~t~~~slk~l  101 (314)
T KOG1444|consen   30 VNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLG-----LVNFRPLDLRTAKKWF---PVSLLFVGMLFTGSKSLKYL  101 (314)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc-----eeecCCcChHHHHHHc---cHHHHHHHHHHHcccccccc
Confidence            334445555422 33444588888877665543321     122211  11122332   11111111123333567888


Q ss_pred             CchhhhhhhchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHH
Q psy5010         114 SPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  159 (178)
Q Consensus       114 ~~~~~sv~~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~  159 (178)
                      +--++.+...+.++.+.+...++|+-.++...|.......+|...+
T Consensus       102 nVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~  147 (314)
T KOG1444|consen  102 NVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAA  147 (314)
T ss_pred             CchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhh
Confidence            8888899999999999999999999999999999988888887553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.82
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.39

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.82  E-value=4.8e-09  Score=74.71  Aligned_cols=70  Identities=3%  Similarity=0.035  Sum_probs=48.4

Q ss_pred             hhHHHHHHHHHHHH-HHhhccCchhhhhh-hchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHHh
Q psy5010          94 IGGLCGFAIGYVTT-LQIKITSPLTHNIS-GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  163 (178)
Q Consensus        94 ~~gv~~~~~~~~~~-~~i~~~~~~~~sv~-~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~k  163 (178)
                      ..+++++++.+..+ ..+++.++.+...+ ..+.|++++++|+++|||++|+.+++|+++++.|+++.+..+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34556666666655 67899888877776 899999999999999999999999999999999999887644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.39  E-value=5.5e-07  Score=61.62  Aligned_cols=68  Identities=3%  Similarity=0.021  Sum_probs=54.2

Q ss_pred             hHHHHHHHHHHHH-HHhhccCchhhhhh-hchhHHHHHHHHHHhcCCcccccchhhhHHhhhhhhHHHHH
Q psy5010          95 GGLCGFAIGYVTT-LQIKITSPLTHNIS-GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  162 (178)
Q Consensus        95 ~gv~~~~~~~~~~-~~i~~~~~~~~sv~-~~l~~v~~~i~g~~~f~e~~t~~~~iG~~lil~g~~l~~~~  162 (178)
                      .++.+....+..+ ..+|+.+..+...+ ..+.|+.++++|+++|||++|+.+++|+.+++.|+.+.+..
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3444555555544 57788776666555 78999999999999999999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00