Psyllid ID: psy5121


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200----
MWPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATVRSGEKSGKTDPVKPGFPSSRLTRLWIKAKF
cccccHHHHHHHHcccccccccccccccccEEEEEccccEEEEcccccccccHHHHHHHccccccccccccccccEEEEEEccccEEEEEEEEEEEcEEEEcccccEEEEEccccEEEEcccccEEEEEEEEEEEEEccccccccccccccEEEEcccccccccccccccccEEEEcccccccccccccccccEEEHHHHHHcc
cccccHHHHHHHHcHHccccccccccccHcEEEEcccccEEEEEEcccccHHHHHHHHHHcccccccHHHHccccEEEEEEcccccEEEEEEEEEEccccccccccEEEcccccEEEEEccccccEEEEEEEEEcccccHHHHHHHccccccEEccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHccc
mwpplitstwarhlpalgvsrnmvdrpsieqvklcypgsvnvsvdidqwpvnykgILSVLTildmpppveadpsrltriltmdfpHYFAVVSRVKQEVhaigpeggmvsssvvpqvqavfpqgaltkKIKVGLQVnlfkprknvppaalkkitvnhipkkkrfslvwvgggatvrsgeksgktdpvkpgfpssrltRLWIKAKF
mwpplitstwarhlpalgvsRNMVDRPSIEQVKLCYPGSVnvsvdidqwpVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVnlfkprknvppaalkkitvnhipkkkrfslvWVGGGAtvrsgeksgktdpvkpgfpssrltrlwikakf
MWPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMvsssvvpqvqavfpqGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATVRSGEKSGKTDPVKPGFPSSRLTRLWIKAKF
****LITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGAT*******************************
*WPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDM*****ADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATVRSG************FPSSRLTRLWIKAKF
MWPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATV************KPGFPSSRLTRLWIKAKF
*WPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATVRSG*****TDPVKPGFPSSRLTRLWIKAKF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MWPPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGATVRSGEKSGKTDPVKPGFPSSRLTRLWIKAKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query204 2.2.26 [Sep-21-2011]
Q8C8R3 3898 Ankyrin-2 OS=Mus musculus yes N/A 0.352 0.018 0.635 1e-20
Q12955 4377 Ankyrin-3 OS=Homo sapiens no N/A 0.5 0.023 0.481 2e-20
G5E8K5 1961 Ankyrin-3 OS=Mus musculus no N/A 0.460 0.047 0.477 2e-20
Q01484 3957 Ankyrin-2 OS=Homo sapiens no N/A 0.348 0.017 0.657 3e-20
Q02357 1862 Ankyrin-1 OS=Mus musculus no N/A 0.294 0.032 0.55 5e-13
P16157 1881 Ankyrin-1 OS=Homo sapiens no N/A 0.294 0.031 0.533 7e-13
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2 Back     alignment and function desciption
 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 2/74 (2%)

Query: 62   ILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFP 121
            +LD P  +E    R+ RI+T DFP YFAVVSR+KQ+ + IGPEGG++SS+VV QVQAVFP
Sbjct: 1094 VLDSPEDLEK--KRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVSQVQAVFP 1151

Query: 122  QGALTKKIKVGLQV 135
            +GALTK+I+VGLQ 
Sbjct: 1152 EGALTKRIRVGLQA 1165




Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.
Mus musculus (taxid: 10090)
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3 Back     alignment and function description
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1 Back     alignment and function description
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 Back     alignment and function description
>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2 Back     alignment and function description
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query204
347967523 1146 AGAP002272-PA [Anopheles gambiae str. PE 0.455 0.081 0.806 2e-39
161082089 1159 ankyrin 2, isoform N [Drosophila melanog 0.480 0.084 0.775 4e-39
442630833 1309 ankyrin 2, isoform W [Drosophila melanog 0.480 0.074 0.775 7e-39
20151935 1009 GH01626p [Drosophila melanogaster] 0.480 0.097 0.775 1e-38
321478442218 hypothetical protein DAPPUDRAFT_95003 [D 0.504 0.472 0.75 8e-34
270004596 7005 hypothetical protein TcasGA2_TC003960 [T 0.328 0.009 0.805 5e-25
328704300 3800 PREDICTED: hypothetical protein LOC10016 0.411 0.022 0.595 7e-25
357626003 766 putative ankyrin 2,3/unc44 [Danaus plexi 0.328 0.087 0.820 3e-24
189235951 1719 PREDICTED: similar to ankyrin 2,3/unc44 0.323 0.038 0.818 6e-24
332022332 7686 Ankyrin-2 [Acromyrmex echinatior] 0.436 0.011 0.606 1e-23
>gi|347967523|ref|XP_307908.4| AGAP002272-PA [Anopheles gambiae str. PEST] gi|333466255|gb|EAA03765.4| AGAP002272-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/93 (80%), Positives = 85/93 (91%)

Query: 75   RLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQ 134
            R+ R +T DFP YFAV+SR++QEVHAIGPEGGMVSS+VVPQVQAVFPQGALTKKIKVGLQ
Sbjct: 1054 RICRFVTYDFPQYFAVISRIRQEVHAIGPEGGMVSSTVVPQVQAVFPQGALTKKIKVGLQ 1113

Query: 135  VNLFKPRKNVPPAALKKITVNHIPKKKRFSLVW 167
            VNLFKPRK V P  L+KI+VNH+PKKKRFSL+W
Sbjct: 1114 VNLFKPRKGVAPEKLRKISVNHVPKKKRFSLIW 1146




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161082089|ref|NP_001097533.1| ankyrin 2, isoform N [Drosophila melanogaster] gi|8132557|gb|AAF73309.1|AF190635_1 ankyrin 2 [Drosophila melanogaster] gi|158028465|gb|ABW08483.1| ankyrin 2, isoform N [Drosophila melanogaster] gi|374275901|gb|AEZ02848.1| FI18613p1 [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442630833|ref|NP_001261536.1| ankyrin 2, isoform W [Drosophila melanogaster] gi|440215441|gb|AGB94231.1| ankyrin 2, isoform W [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|20151935|gb|AAM11327.1| GH01626p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|321478442|gb|EFX89399.1| hypothetical protein DAPPUDRAFT_95003 [Daphnia pulex] Back     alignment and taxonomy information
>gi|270004596|gb|EFA01044.1| hypothetical protein TcasGA2_TC003960 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328704300|ref|XP_003242449.1| PREDICTED: hypothetical protein LOC100167995 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|357626003|gb|EHJ76257.1| putative ankyrin 2,3/unc44 [Danaus plexippus] Back     alignment and taxonomy information
>gi|189235951|ref|XP_001809144.1| PREDICTED: similar to ankyrin 2,3/unc44 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332022332|gb|EGI62644.1| Ankyrin-2 [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query204
ZFIN|ZDB-GENE-060621-1 3980 ank3a "ankyrin 3a" [Danio reri 0.387 0.019 0.481 3.1e-13
UNIPROTKB|G3N0C1 2302 G3N0C1 "Uncharacterized protei 0.348 0.030 0.493 4.1e-13
RGD|620157 960 Ank3 "ankyrin 3, node of Ranvi 0.421 0.089 0.456 8.2e-13
UNIPROTKB|F1M982 1156 Ank3 "Protein Ank3" [Rattus no 0.421 0.074 0.456 1e-12
UNIPROTKB|B1AQT2 1001 ANK3 "Ankyrin-3" [Homo sapiens 0.421 0.085 0.456 1.1e-12
UNIPROTKB|K7GMI1 1001 ANK3 "Uncharacterized protein" 0.421 0.085 0.456 1.1e-12
UNIPROTKB|K7GNH3 1093 ANK3 "Uncharacterized protein" 0.421 0.078 0.456 1.2e-12
UNIPROTKB|F1S146 3896 ANK2 "Uncharacterized protein" 0.348 0.018 0.493 1.6e-12
UNIPROTKB|F1LM13 1783 Ank3 "Protein Ank3" [Rattus no 0.421 0.048 0.456 1.8e-12
MGI|MGI:88026 1961 Ank3 "ankyrin 3, epithelial" [ 0.421 0.043 0.456 2e-12
ZFIN|ZDB-GENE-060621-1 ank3a "ankyrin 3a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 181 (68.8 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 39/81 (48%), Positives = 49/81 (60%)

Query:    56 ILSVLTILD--MPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMXXXXXX 113
             + S+L  +D  M  P E +  R+ RI+T DFP YFAVVSR+KQE   +GPEGG+      
Sbjct:  1054 LTSILNGMDEEMDSPAELEKKRICRIITKDFPQYFAVVSRIKQESDHMGPEGGVLTSEAV 1113

Query:   114 XXXXXXXXXGALTKKIKVGLQ 134
                      GALTKKI+VGLQ
Sbjct:  1114 PMVKAAFPQGALTKKIRVGLQ 1134


GO:0007165 "signal transduction" evidence=IEA
UNIPROTKB|G3N0C1 G3N0C1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|620157 Ank3 "ankyrin 3, node of Ranvier (ankyrin G)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M982 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B1AQT2 ANK3 "Ankyrin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|K7GMI1 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|K7GNH3 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1S146 ANK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1LM13 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:88026 Ank3 "ankyrin 3, epithelial" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 204
KOG4177|consensus 1143 99.61
PF00791103 ZU5: ZU5 domain; InterPro: IPR000906 This is a dom 95.78
>KOG4177|consensus Back     alignment and domain information
Probab=99.61  E-value=3e-17  Score=163.95  Aligned_cols=105  Identities=37%  Similarity=0.461  Sum_probs=93.5

Q ss_pred             cccChhhhhhhcCCCCCCCCCcCCCCceEEEEcCCCCceeEEEeeeeeeeeeecCCCceEEeeeecceeEecCCCCceee
Q psy5121          49 WPVNYKGILSVLTILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKK  128 (204)
Q Consensus        49 Wp~~~e~il~~l~~EeL~slEel~~kRI~RIiT~DFPqYFAVVSRIrQE~~~IGPEGG~lsSsvVPqVQA~FPeGALTKk  128 (204)
                      |-+.+-+.=..--.+.|.+.++|.++|+|||+|.|         |++|+++.+|||||.  |+.+|+||++||++++||+
T Consensus       833 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~---------~v~~~~~~~g~~~~~--~~~~~~~~~~f~~~~~~~~  901 (1143)
T KOG4177|consen  833 WKEHDCNYGEDKLYEILNSAEELDTKRICRIITSD---------RVRQEYLASGPEGGV--STLVPLVQAVFPENALTKR  901 (1143)
T ss_pred             HhhhhhccCcchhhhccchHHHhcccchhhHHhhh---------hhccccccccCCCCc--CcccceehhhcCCCcchHH
Confidence            76644333333345677799999999999999999         999999999999999  9999999999999999999


Q ss_pred             eEEEEEeeecCCCCCCChhhHhhhhccCCCcceeeEEEEecc
Q psy5121         129 IKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGG  170 (204)
Q Consensus       129 IrVgLQaQPI~P~qpV~de~vrki~GN~a~~spivTlEpr~~  170 (204)
                      ||++||+||      ++.++++++.||++++++|+|+|+|+-
T Consensus       902 ~r~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~e~r~~  937 (1143)
T KOG4177|consen  902 IRVSLQAQP------VPLEVVTKLLGNKATFSPIVTVEPRRR  937 (1143)
T ss_pred             HHHHHhccc------ccHHHHHHhcCCcccccceeeecchHH
Confidence            999999977      679999999999999999999999963



>PF00791 ZU5: ZU5 domain; InterPro: IPR000906 This is a domain of unknown function, present in ZO-1 and Unc5-like netrin receptors Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query204
4d8o_A 581 Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd T 5e-13
3ud1_A326 Crystal Structure Of Zu5a-Zu5b Domains Of Human Ery 3e-07
3ud2_C326 Crystal Structure Of Selenomethionine Zu5a-Zu5b Pro 4e-07
>pdb|4D8O|A Chain A, Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd Tandem Length = 581 Back     alignment and structure

Iteration: 1

Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 62 ILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMXXXXXXXXXXXXXX 121 +LD P +E R+ RI+T DFP YFAVVSR+KQ+ + IGPEGG+ Sbjct: 149 VLDSPEDLEK--KRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVPQVQAVFP 206 Query: 122 XGALTKKIKVGLQVN 136 GALTK+I+VGLQ Sbjct: 207 EGALTKRIRVGLQAQ 221
>pdb|3UD1|A Chain A, Crystal Structure Of Zu5a-Zu5b Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure
>pdb|3UD2|C Chain C, Crystal Structure Of Selenomethionine Zu5a-Zu5b Protein Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query204
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 3e-18
4d8o_A 581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 5e-18
3f59_A161 Ankyrin-1; beta sandwich, ZU5, spectrin binding, a 4e-05
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Length = 326 Back     alignment and structure
 Score = 80.2 bits (197), Expect = 3e-18
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 64  DMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQG 123
           ++    E +  R+ RI+T DFP YF ++SR+ Q+   IGPEGG + S +VP VQA FP+ 
Sbjct: 132 ELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDIIGPEGGSLKSKLVPLVQATFPEN 191

Query: 124 ALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHI 157
           A+TK++K+ LQ         VP   + K+  N  
Sbjct: 192 AVTKRVKLALQAQ------PVPDELVTKLLGNQA 219


>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Length = 581 Back     alignment and structure
>3f59_A Ankyrin-1; beta sandwich, ZU5, spectrin binding, alternative P usage, ANK repeat, cytoskeleton, disease mutation; 2.00A {Homo sapiens} PDB: 3kbt_C 3kbu_C Length = 161 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query204
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 100.0
4d8o_A 581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 100.0
3f59_A161 Ankyrin-1; beta sandwich, ZU5, spectrin binding, a 99.51
3f59_A161 Ankyrin-1; beta sandwich, ZU5, spectrin binding, a 91.74
4d8o_A 581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 86.75
3ud1_A 326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 84.86
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Back     alignment and structure
Probab=100.00  E-value=6.6e-38  Score=275.73  Aligned_cols=123  Identities=33%  Similarity=0.475  Sum_probs=110.9

Q ss_pred             eEeeeccccc-----ChhhhhhhcC--CCCCCCCCcCCCCceEEEEcCCCCceeEEEeeeeeeeeeecCCCceEEeeeec
Q psy5121          42 VSVDIDQWPV-----NYKGILSVLT--ILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVP  114 (204)
Q Consensus        42 ~~~~~~~Wp~-----~~e~il~~l~--~EeL~slEel~~kRI~RIiT~DFPqYFAVVSRIrQE~~~IGPEGG~lsSsvVP  114 (204)
                      .|-|-++|.+     +.|.+-..|+  +||++|+||++++|++||+|+|||+|||||||+|||++.||||||+++|+++|
T Consensus       103 rSd~G~~W~eh~~~~~~~~l~~~l~g~~~~~~sle~~~k~r~~ri~v~~fp~~FaVVSRl~qe~~~V~~eGg~l~Ss~~p  182 (326)
T 3ud1_A          103 RSENGSVWKEHRSRYGESYLDQILNGMDEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDIIGPEGGSLKSKLVP  182 (326)
T ss_dssp             EESSSSCCEECCCSSCGGGHHHHTTTCCCCCCCHHHHHC-CEEEEEEEECCSEEEEEEEECCCCEEECTTCEEEECSSCT
T ss_pred             EecCCCcceecccccchhHHHhhhccccccccchhhhcCceEEEEEecCCCeEEEEEeeEEeeeeeECCCCceEeeccCC
Confidence            4557789996     3445555554  78999999999999999999999999999999999999999999999999999


Q ss_pred             ceeEecCCCCceeeeEEEEEeeecCCCCCCChhhHhhhhccCCCcceeeEEEEecc
Q psy5121         115 QVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGG  170 (204)
Q Consensus       115 qVQA~FPeGALTKkIrVgLQaQPI~P~qpV~de~vrki~GN~a~~spivTlEpr~~  170 (204)
                      +|||.|||||+||+++|+|||||      |+++++++++||++++||+||+|||+-
T Consensus       183 ~Vq~~FP~ga~~k~~~V~lQvqp------V~~~~v~~l~g~~~s~SPivtlep~~~  232 (326)
T 3ud1_A          183 LVQATFPENAVTKRVKLALQAQP------VPDELVTKLLGNQATFSPIVTVEPRRR  232 (326)
T ss_dssp             TCEEEECTTSSSSCEEEEEEEEC------CCHHHHHHHHTTSCEECCEEEEESSSC
T ss_pred             CeEEecCCccccCceEEEEEEEe------cCHHHHHHHhcCCCccCCeEEEecCCc
Confidence            99999999999999999999988      567999999999999999999999754



>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Back     alignment and structure
>3f59_A Ankyrin-1; beta sandwich, ZU5, spectrin binding, alternative P usage, ANK repeat, cytoskeleton, disease mutation; 2.00A {Homo sapiens} PDB: 3kbt_C 3kbu_C Back     alignment and structure
>3f59_A Ankyrin-1; beta sandwich, ZU5, spectrin binding, alternative P usage, ANK repeat, cytoskeleton, disease mutation; 2.00A {Homo sapiens} PDB: 3kbt_C 3kbu_C Back     alignment and structure
>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Back     alignment and structure
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00