Psyllid ID: psy5338

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70------
Protein Sequence
MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTPADVKKSYRKACT
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
msqlvtpadvKKSYRKAClavhpdkilewtegkkgNIRALLCSLHTILWEGAKWKcemsqlvtpadvKKSYRKACT
Flexible Loop (DISEMBL)
msqlvtpadvkksyrkaclavhpdkilewtegkkgnIRALLCSLHTILWEGAKWKCEmsqlvtpadvkKSYRKACT
Low Complexity Region (SEG)
MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTPADVKKSYRKACT
Disordered region (IsUnstruct)
************SYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVT*************
Disordered Region (DISOPRED)
*********************HPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTPADVKKSYRKACT
Disordered Region (DISEMBL)
**********KKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTP************
Disordered Region (DISPRO)
*****TPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTPADVKKSYRKACT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEGAKWKCEMSQLVTPADVKKSYRKACT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	76	2.2.26 [Sep-21-2011]
O75061	913	Putative tyrosine-protein	yes	N/A	0.657	0.054	0.653	1e-11
Q27974	910	Putative tyrosine-protein	no	N/A	0.657	0.054	0.653	1e-11
Q80TZ3	938	Putative tyrosine-protein	yes	N/A	0.657	0.053	0.634	3e-11
P97874	1305	Cyclin-G-associated kinas	no	N/A	0.789	0.045	0.530	9e-11
Q99KY4	1305	Cyclin-G-associated kinas	no	N/A	0.789	0.045	0.530	1e-10
O14976	1311	Cyclin-G-associated kinas	no	N/A	0.789	0.045	0.515	8e-10
O13773	697	UBA domain-containing pro	yes	N/A	0.644	0.070	0.52	4e-07
Q9SU08	904	Auxilin-related protein 1	no	N/A	0.657	0.055	0.470	1e-06
Q0WQ57	891	Auxilin-related protein 2	no	N/A	0.657	0.056	0.470	1e-06

>sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 2/52 (3%)

Query: 25  KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA
Sbjct: 821 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 872

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|Q27974|AUXI_BOVIN Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 2/52 (3%)

Query: 25  KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA
Sbjct: 818 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 869

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q80TZ3|AUXI_MOUSE Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 2/52 (3%)

Query: 25  KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YR+A
Sbjct: 846 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRA 897

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P97874|GAK_RAT Cyclin-G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 6/66 (9%)

Query: 15   RKACLAVHPD----KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVK 68
            RK  LA   D    K+L+W EGK+ NIRALL +LHT+LW+G ++W    M+ LVTP  VK
Sbjct: 1199 RKQELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVK 1258

Query: 69   KSYRKA 74
            K YR+A
Sbjct: 1259 KQYRRA 1264

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99KY4|GAK_MOUSE Cyclin-G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 6/66 (9%)

Query: 15   RKACLAVHPD----KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVK 68
            RK  LA   D    K+L+W EGK+ NIRALL +LHT+LW+G ++W    M+ LVTP  VK
Sbjct: 1199 RKQELARDTDPLKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVK 1258

Query: 69   KSYRKA 74
            K YR+A
Sbjct: 1259 KQYRRA 1264

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 6/66 (9%)

Query: 15   RKACLAVHPD----KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVK 68
            RK  LA   D    K+L+W EGK+ NIRALL +LHT+LW+G ++W    M+ LV P  VK
Sbjct: 1205 RKQDLAKDTDPLKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVGMADLVAPEQVK 1264

Query: 69   KSYRKA 74
            K YR+A
Sbjct: 1265 KHYRRA 1270

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O13773|UCP7_SCHPO UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp7 PE=4 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 28  EWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKACT 76
           +W EGK+ N+RALL SL TILW   +W K  +S+LV P  VK +Y KA +
Sbjct: 609 KWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVS 658

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 25  KILEWTEGKKGNIRALLCSLHTILWEGAKWK-CEMSQLVTPADVKKSYRKA 74
           +I  W  GK+GN+RALL +L  +LW    W+   ++ L+T A VKK YRKA
Sbjct: 812 EIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKA 862

Promotes probably uncoating of clathrin-coated vesicles.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 25  KILEWTEGKKGNIRALLCSLHTILWEGAKWK-CEMSQLVTPADVKKSYRKA 74
           +I  W  GK+GN+RALL +L  +LW    W+   ++ L+T A VKK YRKA
Sbjct: 799 EIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKA 849

Promotes probably uncoating of clathrin-coated vesicles.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
91090196	1123	PREDICTED: similar to AGAP003715-PA [Tri	0.802	0.054	0.727	3e-20
156537582	1205	PREDICTED: cyclin-G-associated kinase-li	0.789	0.049	0.698	2e-18
170044846	1194	cyclin G-associated kinase [Culex quinqu	0.671	0.042	0.788	3e-18
312373769	1344	hypothetical protein AND_17024 [Anophele	0.671	0.037	0.788	6e-18
194741626	1197	GF17690 [Drosophila ananassae] gi|190626	0.671	0.042	0.730	7e-18
195036290	1207	GH18708 [Drosophila grimshawi] gi|193893	0.657	0.041	0.764	7e-18
195400222	1212	GJ14155 [Drosophila virilis] gi|19414227	0.671	0.042	0.730	9e-18
157109838	1135	hypothetical protein AaeL_AAEL005425 [Ae	0.671	0.044	0.75	2e-17
194898368	1174	GG12187 [Drosophila erecta] gi|190650489	0.671	0.043	0.711	2e-17
347970471	1287	AGAP003715-PA [Anopheles gambiae str. PE	0.671	0.039	0.769	2e-17

>gi|91090196|ref|XP_967193.1| PREDICTED: similar to AGAP003715-PA [Tribolium castaneum] gi|270013468|gb|EFA09916.1| hypothetical protein TcasGA2_TC012067 [Tribolium castaneum]

 Score =  102 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 5/66 (7%)

Query: 15   RKACLAVHPD----KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKK 69
            RK  +A + D    KI+EW EGKK NIRALLCSLHT+LWEG KW KC+MSQLVTPADVKK
Sbjct: 1015 RKEDMATYMDPDKIKIMEWKEGKKNNIRALLCSLHTVLWEGTKWNKCDMSQLVTPADVKK 1074

Query: 70   SYRKAC 75
            +YRKAC
Sbjct: 1075 AYRKAC 1080

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156537582|ref|XP_001607688.1| PREDICTED: cyclin-G-associated kinase-like [Nasonia vitripennis]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 3/63 (4%)

Query: 16   KACLAVHPDK--ILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYR 72
            +A  ++ PDK  + EWTEGKKGN+RALLCS+HTILW+G KW KCEM  LV+ ADVKKSYR
Sbjct: 1101 EAAKSMDPDKMKVTEWTEGKKGNLRALLCSMHTILWDGCKWQKCEMHMLVSAADVKKSYR 1160

Query: 73   KAC 75
            KAC
Sbjct: 1161 KAC 1163

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170044846|ref|XP_001850042.1| cyclin G-associated kinase [Culex quinquefasciatus] gi|167867967|gb|EDS31350.1| cyclin G-associated kinase [Culex quinquefasciatus]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            K++EWTEGKK NIRALLC++HTILW GAKW KCEM QLV+ ADVKK+YRKAC
Sbjct: 1100 KLMEWTEGKKANIRALLCTVHTILWPGAKWTKCEMHQLVSAADVKKAYRKAC 1151

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312373769|gb|EFR21458.1| hypothetical protein AND_17024 [Anopheles darlingi]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/52 (78%), Positives = 46/52 (88%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            K++EWTEGKK NIRALLC++HT+LW GAKW KCEM QLVT ADVKK YRKAC
Sbjct: 1222 KLMEWTEGKKSNIRALLCTVHTVLWPGAKWTKCEMHQLVTAADVKKIYRKAC 1273

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194741626|ref|XP_001953290.1| GF17690 [Drosophila ananassae] gi|190626349|gb|EDV41873.1| GF17690 [Drosophila ananassae]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/52 (73%), Positives = 48/52 (92%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            +I+EWT+GKK NIRALLCS+HT+LWE AKW +CEMS +VTPA+VKK+YR+AC
Sbjct: 1103 RIMEWTDGKKNNIRALLCSMHTVLWENAKWQRCEMSTMVTPAEVKKAYRRAC 1154

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195036290|ref|XP_001989604.1| GH18708 [Drosophila grimshawi] gi|193893800|gb|EDV92666.1| GH18708 [Drosophila grimshawi]

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/51 (76%), Positives = 47/51 (92%), Gaps = 1/51 (1%)

Query: 26   ILEWTEGKKGNIRALLCSLHTILWEGAKWK-CEMSQLVTPADVKKSYRKAC 75
            I+EWT+GKK NIRALLCS+HT+LWE AKWK CEMS +VTPA+VKK+YR+AC
Sbjct: 1114 IMEWTDGKKNNIRALLCSMHTVLWENAKWKRCEMSTMVTPAEVKKAYRRAC 1164

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195400222|ref|XP_002058717.1| GJ14155 [Drosophila virilis] gi|194142277|gb|EDW58685.1| GJ14155 [Drosophila virilis]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/52 (73%), Positives = 48/52 (92%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            +I+EWT+GKK NIRALLCS+HT+LWE AKW +CEMS +VTPA+VKK+YR+AC
Sbjct: 1118 RIMEWTDGKKNNIRALLCSMHTVLWENAKWQRCEMSTMVTPAEVKKAYRRAC 1169

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109838|ref|XP_001650843.1| hypothetical protein AaeL_AAEL005425 [Aedes aegypti] gi|108878880|gb|EAT43105.1| AAEL005425-PA, partial [Aedes aegypti]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            K++EWTEGKK NIRALLC++HT+LW GAKW KC+M QLV+ ADVKK+YRKAC
Sbjct: 1041 KLMEWTEGKKNNIRALLCTVHTVLWPGAKWTKCDMHQLVSAADVKKTYRKAC 1092

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194898368|ref|XP_001978786.1| GG12187 [Drosophila erecta] gi|190650489|gb|EDV47744.1| GG12187 [Drosophila erecta]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/52 (71%), Positives = 48/52 (92%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            +I+EWT+GKK NIRALLCS+HT+LW+ AKW +CEMS +VTPA+VKK+YR+AC
Sbjct: 1080 RIMEWTDGKKNNIRALLCSMHTVLWDNAKWQRCEMSTMVTPAEVKKAYRRAC 1131

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970471|ref|XP_310244.7| AGAP003715-PA [Anopheles gambiae str. PEST] gi|333466689|gb|EAA06048.5| AGAP003715-PA [Anopheles gambiae str. PEST]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 1/52 (1%)

Query: 25   KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
            K++EWTEGKK NIRALLC++HT+LW GAKW KCEM QLV+ ADVKK YRKAC
Sbjct: 1193 KLMEWTEGKKNNIRALLCTVHTVLWPGAKWTKCEMHQLVSAADVKKIYRKAC 1244

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
FB|FBgn0037218	1165	aux "auxillin" [Drosophila mel	0.671	0.043	0.692	1.2e-16
UNIPROTKB|F1NC60	1225	Gga.54538 "Uncharacterized pro	0.657	0.040	0.673	1e-11
UNIPROTKB|F1NL76	1265	Gga.54538 "Uncharacterized pro	0.657	0.039	0.673	1.1e-11
UNIPROTKB|F1NC57	1266	Gga.54538 "Uncharacterized pro	0.657	0.039	0.673	1.1e-11
UNIPROTKB|F1MIB2	1268	GAK "Uncharacterized protein"	0.657	0.039	0.634	3.2e-11
ZFIN|ZDB-GENE-080104-2	903	dnajc6 "DnaJ (Hsp40) homolog,	0.657	0.055	0.634	3.8e-11
UNIPROTKB|Q27974	910	DNAJC6 "Putative tyrosine-prot	0.657	0.054	0.653	3.9e-11
UNIPROTKB|O75061	913	DNAJC6 "Putative tyrosine-prot	0.657	0.054	0.653	3.9e-11
UNIPROTKB|F1PGG9	1304	GAK "Uncharacterized protein"	0.657	0.038	0.615	4.8e-11
MGI|MGI:1919935	938	Dnajc6 "DnaJ (Hsp40) homolog,	0.657	0.053	0.634	8.5e-11

FB|FBgn0037218 aux "auxillin" [Drosophila melanogaster (taxid:7227)]

 Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 36/52 (69%), Positives = 47/52 (90%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKAC 75
             +I+EWT+GKK NIRALLCS+HT+LW+ AKW +CEMS +VTP +VKK+YR+AC
Sbjct:  1071 RIMEWTDGKKNNIRALLCSMHTVLWDNAKWQRCEMSTMVTPTEVKKAYRRAC 1122

GO:0016191 "synaptic vesicle uncoating" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IMP

GO:0001745 "compound eye morphogenesis" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0007291 "sperm individualization" evidence=IMP

UNIPROTKB|F1NC60 Gga.54538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEGA-KWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRAL+ +LHT+LWEG  KWK   M+ LVTP  VKK YRKA
Sbjct:  1133 KILEWIEGKERNIRALISTLHTVLWEGENKWKPVSMADLVTPEQVKKYYRKA 1184

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NL76 Gga.54538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEGA-KWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRAL+ +LHT+LWEG  KWK   M+ LVTP  VKK YRKA
Sbjct:  1173 KILEWIEGKERNIRALISTLHTVLWEGENKWKPVSMADLVTPEQVKKYYRKA 1224

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NC57 Gga.54538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEGA-KWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRAL+ +LHT+LWEG  KWK   M+ LVTP  VKK YRKA
Sbjct:  1174 KILEWIEGKERNIRALISTLHTVLWEGENKWKPVSMADLVTPEQVKKYYRKA 1225

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|F1MIB2 GAK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 33/52 (63%), Positives = 41/52 (78%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             K+LEWTEGK+ NIRALL +LHT LW+G ++W    M+ LVTPA VKK YR+A
Sbjct:  1176 KLLEWTEGKERNIRALLSTLHTALWDGESRWTPVGMADLVTPAQVKKHYRRA 1227

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

ZFIN|ZDB-GENE-080104-2 dnajc6 "DnaJ (Hsp40) homolog, subfamily C, member 6" [Danio rerio (taxid:7955)]

 Score = 166 (63.5 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 33/52 (63%), Positives = 40/52 (76%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             KIL+W EGK+ NIRALL ++HT+LWEG  +WK   M+ LVTP  VKK YRKA
Sbjct:   811 KILDWIEGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKA 862

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q27974 DNAJC6 "Putative tyrosine-protein phosphatase auxilin" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 34/52 (65%), Positives = 39/52 (75%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA
Sbjct:   818 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 869

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

UNIPROTKB|O75061 DNAJC6 "Putative tyrosine-protein phosphatase auxilin" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 34/52 (65%), Positives = 39/52 (75%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA
Sbjct:   821 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 872

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

UNIPROTKB|F1PGG9 GAK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 167 (63.8 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 32/52 (61%), Positives = 41/52 (78%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             K+LEWTEGK+ NIRALL +LHT+LW+G ++W    M+ LVTP  VKK YR+A
Sbjct:  1212 KLLEWTEGKERNIRALLSTLHTVLWDGESRWAPVGMADLVTPGQVKKQYRRA 1263

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:1919935 Dnajc6 "DnaJ (Hsp40) homolog, subfamily C, member 6" [Mus musculus (taxid:10090)]

 Score = 163 (62.4 bits), Expect = 8.5e-11, P = 8.5e-11
 Identities = 33/52 (63%), Positives = 39/52 (75%)

Query:    25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKA 74
             KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YR+A
Sbjct:   846 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRA 897

GO:0003674 "molecular_function" evidence=ND

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O13773	UCP7_SCHPO	No assigned EC number	0.52	0.6447	0.0703	yes	N/A
O75061	AUXI_HUMAN	3, ., 1, ., 3, ., 4, 8	0.6538	0.6578	0.0547	yes	N/A
Q80TZ3	AUXI_MOUSE	3, ., 1, ., 3, ., 4, 8	0.6346	0.6578	0.0533	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	76
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	9e-05
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-04
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	4e-04
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.003
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	0.004

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 36.0 bits (84), Expect = 9e-05
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 6  TPADVKKSYRKACLAVHPDK 25
          +  ++KK+YRK  L  HPDK
Sbjct: 13 SDEEIKKAYRKLALKYHPDK 32

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 35.2 bits (82), Expect = 2e-04
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 6  TPADVKKSYRKACLAVHPDK 25
          +  ++KK+YRK  L  HPDK
Sbjct: 13 SDEEIKKAYRKLALKYHPDK 32

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 34.1 bits (79), Expect = 4e-04
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 6  TPADVKKSYRKACLAVHPDK 25
          +  ++KK+YRK  L  HPDK
Sbjct: 14 SLDEIKKAYRKLALKYHPDK 33

Length = 60

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDK 25
          M+       ++K+Y + C   HPDK
Sbjct: 21 MAAWGNLPLMRKAYLRKCKEYHPDK 45

Length = 647

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 33.3 bits (76), Expect = 0.004
 Identities = 11/25 (44%), Positives = 18/25 (72%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDK 25
          +S+  +P ++KK+YRK  +  HPDK
Sbjct: 9  VSKTASPEEIKKAYRKLAVKYHPDK 33

Length = 391

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	76
KOG0431|consensus	453		99.91
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.12
KOG0713|consensus	336		99.04
PRK14288	369	chaperone protein DnaJ; Provisional	98.85
KOG0712|consensus	337		98.77
PRK14296	372	chaperone protein DnaJ; Provisional	98.75
PRK14279	392	chaperone protein DnaJ; Provisional	98.7
PRK14282	369	chaperone protein DnaJ; Provisional	98.68
PRK14286	372	chaperone protein DnaJ; Provisional	98.67
PRK14283	378	chaperone protein DnaJ; Provisional	98.67
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	98.66
PRK14287	371	chaperone protein DnaJ; Provisional	98.65
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.62
KOG0716|consensus	279		98.62
PRK14299	291	chaperone protein DnaJ; Provisional	98.62
PRK14295	389	chaperone protein DnaJ; Provisional	98.61
PRK14285	365	chaperone protein DnaJ; Provisional	98.61
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	98.61
PRK14278	378	chaperone protein DnaJ; Provisional	98.59
PRK14291	382	chaperone protein DnaJ; Provisional	98.59
PRK14284	391	chaperone protein DnaJ; Provisional	98.59
PRK14294	366	chaperone protein DnaJ; Provisional	98.59
PRK14290	365	chaperone protein DnaJ; Provisional	98.58
KOG0691|consensus	296		98.58
PRK14280	376	chaperone protein DnaJ; Provisional	98.57
PRK14276	380	chaperone protein DnaJ; Provisional	98.57
PRK14277	386	chaperone protein DnaJ; Provisional	98.56
PRK14298	377	chaperone protein DnaJ; Provisional	98.56
PRK14297	380	chaperone protein DnaJ; Provisional	98.56
PRK10767	371	chaperone protein DnaJ; Provisional	98.54
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	98.54
PRK14301	373	chaperone protein DnaJ; Provisional	98.54
PHA03102	153	Small T antigen; Reviewed	98.51
PRK14281	397	chaperone protein DnaJ; Provisional	98.5
KOG0717|consensus	508		98.5
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	98.49
PRK14300	372	chaperone protein DnaJ; Provisional	98.49
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.48
PRK14289	386	chaperone protein DnaJ; Provisional	98.42
KOG0715|consensus	288		98.41
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	98.39
PRK14292	371	chaperone protein DnaJ; Provisional	98.38
PRK14293	374	chaperone protein DnaJ; Provisional	98.37
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	98.32
KOG0718|consensus	546		98.32
KOG0721|consensus	230		98.28
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	98.27
KOG0719|consensus	264		98.26
PTZ00100	116	DnaJ chaperone protein; Provisional	98.24
KOG0722|consensus	329		98.14
KOG0431|consensus	453		98.03
PHA02624	647	large T antigen; Provisional	97.89
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.88
KOG0550|consensus	486		97.69
KOG0714|consensus	306		97.68
KOG1150|consensus	250		97.52
KOG0720|consensus	490		97.52
PRK05014	171	hscB co-chaperone HscB; Provisional	97.4
PRK01356	166	hscB co-chaperone HscB; Provisional	97.21
PRK03578	176	hscB co-chaperone HscB; Provisional	97.2
PRK00294	173	hscB co-chaperone HscB; Provisional	97.08
KOG0624|consensus	504		96.98
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	96.87
KOG1789|consensus	2235		96.57
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	96.12
PRK01773	173	hscB co-chaperone HscB; Provisional	94.37
KOG0723|consensus	112		93.03
KOG0568|consensus	342		92.7
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	90.08
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	85.63
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	85.29

>KOG0431|consensus

Probab=99.91  E-value=3.1e-25  Score=171.65  Aligned_cols=61  Identities=49%  Similarity=0.889  Sum_probs=57.9

Q ss_pred             HHHHHhCCC--CcccchhchHHHHHHHHHhhhhhhcCCCCc-cccccccCCchhHHHHHHhhcC
Q psy5338          16 KACLAVHPD--KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKACT   76 (76)
Q Consensus        16 ~~a~~~hPD--Ki~~W~e~ke~n~R~LL~~l~~vLw~~~~w-~v~~~~l~~~~~vK~~y~ka~~   76 (76)
                      ++++.+.|.  +|..|.+|+++|||+||+|||.|||++++| +|||+|||+|++|||+||||||
T Consensus       351 e~~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L  414 (453)
T KOG0431|consen  351 ELSRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVL  414 (453)
T ss_pred             HHHhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhh
Confidence            457888885  899999999999999999999999999999 9999999999999999999997

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.12  E-value=9.3e-11  Score=89.80  Aligned_cols=47  Identities=21%  Similarity=0.347  Sum_probs=39.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||++|||||||+||++||||+++. .+.++..|+.+-..+ +||-
T Consensus        12 V~k~As~~EIKkAYRkLA~kyHPD~n~g-~~~AeeKFKEI~eAY-EVLs   58 (371)
T COG0484          12 VSKDASEEEIKKAYRKLAKKYHPDRNPG-DKEAEEKFKEINEAY-EVLS   58 (371)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCC-CHHHHHHHHHHHHHH-HHhC
Confidence            6899999999999999999999999996 467888888876654 4553

>KOG0713|consensus

Probab=99.04  E-value=3.4e-10  Score=85.79  Aligned_cols=43  Identities=23%  Similarity=0.399  Sum_probs=38.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++|+.+|||+|||+||+++|||||++. +.+...|..+...+
T Consensus        24 V~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AY   66 (336)
T KOG0713|consen   24 VPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAY   66 (336)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHH
Confidence            58999999999999999999999999975 67888888887765

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.85  E-value=5e-09  Score=79.23  Aligned_cols=47  Identities=23%  Similarity=0.306  Sum_probs=35.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||++|||||||++|+++||||++.- ..++..|..+-.. -+||-
T Consensus        11 v~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~A-YevLs   57 (369)
T PRK14288         11 VEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEA-YGVLS   57 (369)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHH-HHHhc
Confidence            57999999999999999999999998742 3355566554443 34553

>KOG0712|consensus

Probab=98.77  E-value=1.1e-08  Score=77.81  Aligned_cols=44  Identities=27%  Similarity=0.391  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||++|||||||++|+++||||+++    +...|+++-. ..+||-
T Consensus        12 v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~-AyevLs   55 (337)
T KOG0712|consen   12 VSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQ-AYEVLS   55 (337)
T ss_pred             cCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHH-HHHHhc
Confidence            5789999999999999999999999996    5566666543 334553

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.75  E-value=1.6e-08  Score=76.64  Aligned_cols=42  Identities=17%  Similarity=0.295  Sum_probs=33.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||++|||+|||++|+++|||++++  ..++..|+.+-..+
T Consensus        12 v~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~Ay   53 (372)
T PRK14296         12 VSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAA   53 (372)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHH
Confidence            5789999999999999999999999863  45666676554443

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.70  E-value=3.1e-08  Score=75.54  Aligned_cols=47  Identities=26%  Similarity=0.344  Sum_probs=34.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||||||++|+++||||++.- +.++..|..|-. .-+||-
T Consensus        17 v~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~-Ay~vLs   63 (392)
T PRK14279         17 VSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSE-AHDVLS   63 (392)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHH-HHHHhc
Confidence            57899999999999999999999998742 345555654443 334443

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.68  E-value=3.6e-08  Score=74.42  Aligned_cols=47  Identities=19%  Similarity=0.371  Sum_probs=35.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+++|||++..-...++..|+.+...+ +||
T Consensus        12 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay-~vL   58 (369)
T PRK14282         12 VSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAY-EVL   58 (369)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHH-HHh
Confidence            57899999999999999999999998643234556666544443 344

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.67  E-value=4.1e-08  Score=74.35  Aligned_cols=46  Identities=24%  Similarity=0.353  Sum_probs=34.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+++|||+++.- ..++..|+.+-.. .+||
T Consensus        12 v~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~A-y~vL   57 (372)
T PRK14286         12 VSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEA-YEIL   57 (372)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHH-HHHh
Confidence            57899999999999999999999998642 3355556554333 3344

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.67  E-value=4.2e-08  Score=74.27  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++|+++|||++++  +.++..|+++...+
T Consensus        13 v~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay   54 (378)
T PRK14283         13 VDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAY   54 (378)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHH
Confidence            5789999999999999999999999874  45667776665554

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=98.66  E-value=1e-07  Score=54.00  Aligned_cols=46  Identities=24%  Similarity=0.330  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHT   46 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~   46 (76)
                      |++++|.++||++|+++++.+|||+...-.+.....|+.|...++.
T Consensus         9 l~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~   54 (60)
T smart00271        9 VPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEV   54 (60)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHH
Confidence            5778999999999999999999998763223444555555444443

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.65  E-value=5.4e-08  Score=73.70  Aligned_cols=45  Identities=22%  Similarity=0.319  Sum_probs=35.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||||||++|+++|||++++  +.++..|..+...+ +||
T Consensus        12 v~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay-~~L   56 (371)
T PRK14287         12 VDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAY-DTL   56 (371)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHH-HHh
Confidence            5789999999999999999999999863  44556666554444 355

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.62  E-value=5.7e-08  Score=75.08  Aligned_cols=43  Identities=28%  Similarity=0.437  Sum_probs=32.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||||||++|+++||||+.+     ...|.. ++..-+||-
T Consensus        36 V~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~-i~~AYevLs   78 (421)
T PTZ00037         36 LSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKE-ISRAYEVLS   78 (421)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHH-HHHHHHHhc
Confidence            5789999999999999999999999752     244544 344444553

>KOG0716|consensus

Probab=98.62  E-value=6.5e-08  Score=71.98  Aligned_cols=48  Identities=27%  Similarity=0.336  Sum_probs=38.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWE   50 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~   50 (76)
                      |+++||.++|||+||++|+.+||||..+.  ....+.-.++++.++||=+
T Consensus        39 l~k~at~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD   86 (279)
T KOG0716|consen   39 LPKTATKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSD   86 (279)
T ss_pred             CCcccchHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999998865  4455566666777777743

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.62  E-value=7.4e-08  Score=70.74  Aligned_cols=46  Identities=20%  Similarity=0.341  Sum_probs=34.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+.+|||++.+  ..++..|..+- ..-+||.
T Consensus        12 v~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~-~Ay~~L~   57 (291)
T PRK14299         12 VPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEIN-EAYTVLS   57 (291)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHH-HHHHHhc
Confidence            5789999999999999999999999863  34555555443 3334454

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.61  E-value=7.5e-08  Score=73.38  Aligned_cols=47  Identities=23%  Similarity=0.302  Sum_probs=35.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+++|||++..- ..++..|+.| +..-+||-
T Consensus        17 v~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i-~~Ay~vL~   63 (389)
T PRK14295         17 VPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEI-SEAYDVLS   63 (389)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHH-HHHHHHHC
Confidence            57899999999999999999999998642 3455666544 44444553

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.61  E-value=7.9e-08  Score=72.67  Aligned_cols=48  Identities=23%  Similarity=0.324  Sum_probs=35.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWE   50 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~   50 (76)
                      |+++||.+|||+|||++|+++||||+..- +.++..|+.+-. .-+||-+
T Consensus        11 v~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~-Ay~vL~d   58 (365)
T PRK14285         11 LSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATE-AYEVLID   58 (365)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHH-HHHHHcC
Confidence            57899999999999999999999998642 334555654443 4445544

>cd06257 DnaJ DnaJ domain or J-domain

Probab=98.61  E-value=1.7e-07  Score=52.16  Aligned_cols=41  Identities=24%  Similarity=0.354  Sum_probs=30.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLC   42 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~   42 (76)
                      +++++|.++||++||++++.+|||+...- +.....|..|..
T Consensus         8 l~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~   48 (55)
T cd06257           8 VPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINE   48 (55)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHH
Confidence            46889999999999999999999987631 234444444433

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.59  E-value=8.9e-08  Score=72.68  Aligned_cols=45  Identities=24%  Similarity=0.472  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+++|||++.+  ..++..|+.+-..+ +||
T Consensus        11 v~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay-~vL   55 (378)
T PRK14278         11 VSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAY-EVL   55 (378)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHH-HHh
Confidence            5789999999999999999999999873  44556666554444 355

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.59  E-value=9.3e-08  Score=72.56  Aligned_cols=46  Identities=22%  Similarity=0.325  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+.+|||++.+  ..++..|+.+ +...+||-
T Consensus        11 v~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i-~~Ay~vLs   56 (382)
T PRK14291         11 VSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEI-NEAYQVLS   56 (382)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHH-HHHHHHhc
Confidence            5789999999999999999999999874  3455556544 33334553

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.59  E-value=9.3e-08  Score=72.75  Aligned_cols=42  Identities=26%  Similarity=0.421  Sum_probs=32.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~   43 (76)
                      |+++||++|||||||++|+.+|||++++- +.++..|+.+...
T Consensus         9 v~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~A   50 (391)
T PRK14284          9 VSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEA   50 (391)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHH
Confidence            57899999999999999999999998742 3455556544433

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.59  E-value=1e-07  Score=71.88  Aligned_cols=46  Identities=22%  Similarity=0.303  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+++|||+++.- +.++..|..+-. .-+||
T Consensus        12 v~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~-Ay~vL   57 (366)
T PRK14294         12 VTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAE-AYEVL   57 (366)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHH-HHHHh
Confidence            57899999999999999999999998742 234555655543 33444

>PRK14290 chaperone protein DnaJ; Provisional

Probab=98.58  E-value=1.1e-07  Score=71.77  Aligned_cols=48  Identities=17%  Similarity=0.252  Sum_probs=36.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+++|||+++.-.+.++..|+.+...+ +||-
T Consensus        11 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay-~~L~   58 (365)
T PRK14290         11 VDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAY-EVLS   58 (365)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHH-HHhc
Confidence            57899999999999999999999998753334666676555444 4443

>KOG0691|consensus

Probab=98.58  E-value=9.8e-08  Score=71.42  Aligned_cols=46  Identities=33%  Similarity=0.432  Sum_probs=38.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+.+||.+||+||||..|+++||||+++..+ +..+|..|=..+ +||
T Consensus        13 i~~~at~~eIkKaYr~kaL~~HPDKNp~dP~-A~ekFq~L~eAy-~VL   58 (296)
T KOG0691|consen   13 ISEDATDAEIKKAYRKKALQYHPDKNPGDPQ-AAEKFQELSEAY-EVL   58 (296)
T ss_pred             CCCCCCHHHHHHHHHHHHHhcCCCCCCCChH-HHHHHHHHHHHH-HHh
Confidence            4678999999999999999999999999866 888998665554 444

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.57  E-value=1.1e-07  Score=72.02  Aligned_cols=45  Identities=29%  Similarity=0.467  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+.+|||++++  ..++..|+.+...+ +||
T Consensus        12 v~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay-~vL   56 (376)
T PRK14280         12 VSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAY-EVL   56 (376)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHH-HHh
Confidence            5789999999999999999999999863  45566666554444 344

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.57  E-value=1.2e-07  Score=71.94  Aligned_cols=46  Identities=26%  Similarity=0.346  Sum_probs=34.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+.+|||++.+  ..++..|..|- ..-+||-
T Consensus        12 v~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~-~Ay~vL~   57 (380)
T PRK14276         12 VSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQ-EAYETLS   57 (380)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHH-HHHHHhc
Confidence            5789999999999999999999999873  34555665444 4444553

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.56  E-value=1.3e-07  Score=71.94  Aligned_cols=46  Identities=22%  Similarity=0.309  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+++|||+++.- ..++..|..+...+ +||
T Consensus        13 v~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay-~vL   58 (386)
T PRK14277         13 VDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAY-EIL   58 (386)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHH-HHh
Confidence            57899999999999999999999998742 23445555444443 344

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.56  E-value=1.3e-07  Score=71.91  Aligned_cols=47  Identities=28%  Similarity=0.440  Sum_probs=35.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWE   50 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~   50 (76)
                      |+++||.+|||+|||++|+++|||++++  ..++..|+.+-.. -+||-+
T Consensus        13 v~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~A-y~vL~d   59 (377)
T PRK14298         13 LSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEA-YAVLSD   59 (377)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHH-HHHhcc
Confidence            5789999999999999999999999863  4566667654444 345543

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.56  E-value=1.3e-07  Score=71.61  Aligned_cols=48  Identities=19%  Similarity=0.342  Sum_probs=36.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWE   50 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~   50 (76)
                      |+++||.+|||+|||++|+.+|||++..- +.++..|+.|...+ +||-+
T Consensus        12 v~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay-~vL~d   59 (380)
T PRK14297         12 LEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAY-QVLSD   59 (380)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHH-HHhcC
Confidence            57899999999999999999999998642 34556666554444 45533

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.54  E-value=1.7e-07  Score=70.72  Aligned_cols=46  Identities=22%  Similarity=0.387  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+.+||||+..- ..++..|+.+-..+ +||
T Consensus        12 v~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay-~~L   57 (371)
T PRK10767         12 VSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAY-EVL   57 (371)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHH-HHh
Confidence            57899999999999999999999998642 23445555544444 444

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=98.54  E-value=3e-07  Score=52.96  Aligned_cols=29  Identities=28%  Similarity=0.398  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      |+++++.++||++|+++++.+|||++..-
T Consensus         8 l~~~~~~~eik~~y~~l~~~~HPD~~~~~   36 (64)
T PF00226_consen    8 LPPDASDEEIKKAYRRLSKQYHPDKNSGD   36 (64)
T ss_dssp             STTTSSHHHHHHHHHHHHHHTSTTTGTST
T ss_pred             CCCCCCHHHHHHHHHhhhhccccccchhh
Confidence            57899999999999999999999998753

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.54  E-value=1.6e-07  Score=71.20  Aligned_cols=47  Identities=23%  Similarity=0.340  Sum_probs=34.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++|+++||||+..- +.++..|..+-. .-+||-
T Consensus        12 v~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~-Ay~vL~   58 (373)
T PRK14301         12 VSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAE-AYEVLR   58 (373)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHH-HHHHhc
Confidence            57899999999999999999999998742 334555654443 334553

>PHA03102 Small T antigen; Reviewed

Probab=98.51  E-value=2.1e-07  Score=63.98  Aligned_cols=27  Identities=30%  Similarity=0.518  Sum_probs=24.7

Q ss_pred             CCCCC--CHHHHHHHHHHHHHHhCCCCcc
Q psy5338           1 MSQLV--TPADVKKSYRKACLAVHPDKIL   27 (76)
Q Consensus         1 ~~~~a--t~~eikkayr~~a~~~hPDKi~   27 (76)
                      |+++|  |.+|||+|||++|+.+||||..
T Consensus        13 l~~~A~~s~~eIKkAYr~la~~~HPDkgg   41 (153)
T PHA03102         13 LPRSAWGNLPLMRKAYLRKCLEFHPDKGG   41 (153)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCcCCCc
Confidence            57889  9999999999999999999953

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.50  E-value=2.3e-07  Score=70.84  Aligned_cols=47  Identities=26%  Similarity=0.388  Sum_probs=34.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||||||++|+.+||||+..- ..++..|+. ++..-+||-
T Consensus        11 v~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~-i~~Ay~vL~   57 (397)
T PRK14281         11 VSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKE-VNEAYEVLS   57 (397)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHH-HHHHHHHhh
Confidence            57899999999999999999999998642 234455544 344444543

>KOG0717|consensus

Probab=98.50  E-value=1.8e-07  Score=73.94  Aligned_cols=44  Identities=25%  Similarity=0.398  Sum_probs=37.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++|+..|||++||++|+++||||+++-.+.+...|+.|-+.+
T Consensus        16 v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAY   59 (508)
T KOG0717|consen   16 VERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAY   59 (508)
T ss_pred             ccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999876667777787776665

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=98.49  E-value=2.6e-07  Score=69.15  Aligned_cols=45  Identities=22%  Similarity=0.394  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+.+|||++.  ...++..|..|...+ +||
T Consensus         8 v~~~a~~~~ik~ayr~la~~~HPD~~~--~~~~~~~f~~i~~Ay-~vL   52 (354)
T TIGR02349         8 VSKDASEEEIKKAYRKLAKKYHPDRNK--DKEAEEKFKEINEAY-EVL   52 (354)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCC--CccHHHHHHHHHHHH-HHh
Confidence            578999999999999999999999986  334555555444433 344

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.49  E-value=2.6e-07  Score=69.93  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=33.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++|+.+|||++..  ..++..|+.+...+
T Consensus        11 v~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay   52 (372)
T PRK14300         11 VSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAY   52 (372)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHH
Confidence            5789999999999999999999999862  44566666655544

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.48  E-value=2.9e-07  Score=67.97  Aligned_cols=41  Identities=17%  Similarity=0.268  Sum_probs=31.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~   43 (76)
                      |+++||.+|||+|||++|+++|||++.+  +.++..|..+-..
T Consensus        12 v~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~A   52 (306)
T PRK10266         12 VKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEA   52 (306)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHH
Confidence            5789999999999999999999999763  3455555544443

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.42  E-value=4.7e-07  Score=68.65  Aligned_cols=40  Identities=28%  Similarity=0.401  Sum_probs=31.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALL   41 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL   41 (76)
                      |+++||.+|||+|||++|+.+|||+++.- ..++..|..+-
T Consensus        13 v~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~   52 (386)
T PRK14289         13 VSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAA   52 (386)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHH
Confidence            57899999999999999999999998742 23444555433

>KOG0715|consensus

Probab=98.41  E-value=4.5e-07  Score=67.18  Aligned_cols=43  Identities=19%  Similarity=0.309  Sum_probs=36.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      ++++||..|||+||+++|+.+|||-+.+  ++++..|..+-+.++
T Consensus        51 v~~~At~~EIK~Af~~LaKkyHPD~n~~--~~a~~kF~eI~~AYE   93 (288)
T KOG0715|consen   51 VSRNATLSEIKSAFRKLAKKYHPDVNKD--KEASKKFKEISEAYE   93 (288)
T ss_pred             cCCCCCHHHHHHHHHHHHHhhCCCCCCC--cchhhHHHHHHHHHH
Confidence            5789999999999999999999997663  478888888777764

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=98.39  E-value=5.9e-07  Score=65.76  Aligned_cols=47  Identities=26%  Similarity=0.380  Sum_probs=36.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc------hhchHHHHHHHHHhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW------TEGKKGNIRALLCSLHTI   47 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W------~e~ke~n~R~LL~~l~~v   47 (76)
                      +++++|.+|||++||++++.+||||+..=      .+.++..|+.+...++.+
T Consensus       208 v~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L  260 (267)
T PRK09430        208 VSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI  260 (267)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999997531      123556777777666544

>PRK14292 chaperone protein DnaJ; Provisional

Probab=98.38  E-value=6.8e-07  Score=67.41  Aligned_cols=48  Identities=27%  Similarity=0.468  Sum_probs=36.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcCC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEG   51 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~~   51 (76)
                      |+++||.+|||+|||++|+++|||++.+  ..++..| ..++..-+||.+.
T Consensus        10 v~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~-~~i~~Ay~vL~d~   57 (371)
T PRK14292         10 VSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKF-AQINEAYAVLSDA   57 (371)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHH-HHHHHHHHHhcch
Confidence            5789999999999999999999999863  2344444 5555555677653

>PRK14293 chaperone protein DnaJ; Provisional

Probab=98.37  E-value=7.7e-07  Score=67.36  Aligned_cols=45  Identities=22%  Similarity=0.391  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+++||.+|||+|||++|+.+|||++.+  ..++..|..+-.. -+||
T Consensus        11 v~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~A-y~vL   55 (374)
T PRK14293         11 VSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRA-YEVL   55 (374)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHH-HHHH
Confidence            5789999999999999999999999873  3455555444333 3344

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=98.32  E-value=1.7e-06  Score=56.99  Aligned_cols=29  Identities=31%  Similarity=0.447  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      |+++||..||++|||++|+.+|||++..-
T Consensus        14 v~~~as~~eik~ayrkla~~~HPD~~~~~   42 (237)
T COG2214          14 VPPNASLEEIKKAYRKLALKYHPDRNPGD   42 (237)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCc
Confidence            46899999999999999999999998854

>KOG0718|consensus

Probab=98.32  E-value=9.5e-07  Score=70.18  Aligned_cols=71  Identities=20%  Similarity=0.382  Sum_probs=48.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHhhhhhhcCC----------------CCccccccccC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCSLHTILWEG----------------AKWKCEMSQLV   62 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~l~~vLw~~----------------~~w~v~~~~l~   62 (76)
                      ++++||.+|||+|||++++.+||||..+-..  .++.+| ..+....+||-+.                .||.|. .-.-
T Consensus        17 lpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F-~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~gwEl~-~r~~   94 (546)
T KOG0718|consen   17 LPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKF-QRIQRAYEVLSDPQKRAIYDNYGEQGLKTEGWELG-FRGK   94 (546)
T ss_pred             CCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHH-HHHHHHHHHhcChHHHHHHHHhhhccccccCceee-cCCC
Confidence            5799999999999999999999999986432  455555 4456666776542                255221 1234


Q ss_pred             CchhHHHHHHh
Q psy5338          63 TPADVKKSYRK   73 (76)
Q Consensus        63 ~~~~vK~~y~k   73 (76)
                      +|..+|.-|.+
T Consensus        95 tpeEIreE~Er  105 (546)
T KOG0718|consen   95 TPEEIREEYER  105 (546)
T ss_pred             CHHHHHHHHHH
Confidence            67777777764

>KOG0721|consensus

Probab=98.28  E-value=1.5e-06  Score=63.23  Aligned_cols=28  Identities=29%  Similarity=0.535  Sum_probs=26.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      |++++|++|||||||+|..++||||++.
T Consensus       107 l~pgas~~eIKkaYR~LSik~HPDK~~~  134 (230)
T KOG0721|consen  107 LDPGASEKEIKKAYRRLSIKYHPDKQPP  134 (230)
T ss_pred             CCCCCCHHHHHHHHHHhhhhhCCCcCCC
Confidence            5789999999999999999999999874

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=98.27  E-value=1.4e-06  Score=73.86  Aligned_cols=47  Identities=13%  Similarity=0.075  Sum_probs=36.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWE   50 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~   50 (76)
                      |+++||.+|||||||++|+.+||||++.  ..+...|+.+-..+ +||-+
T Consensus       581 Vs~dAS~~EIKKAYRKLAlkyHPDKN~~--~~A~ekFq~I~EAY-eVLSD  627 (1136)
T PTZ00341        581 VGVNADMKEISERYFKLAENYYPPKRSG--NEGFHKFKKINEAY-QILGD  627 (1136)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHH-HHhCC
Confidence            5789999999999999999999999875  24666777665444 44533

>KOG0719|consensus

Probab=98.26  E-value=1.7e-06  Score=63.85  Aligned_cols=27  Identities=33%  Similarity=0.575  Sum_probs=25.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKIL   27 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~   27 (76)
                      |.++||+.+|+|||+++|+.+||||+.
T Consensus        22 Ver~a~~~eIrkAY~klal~~HPDk~~   48 (264)
T KOG0719|consen   22 VERDATDKEIRKAYHKLALRLHPDKNH   48 (264)
T ss_pred             hcccCCHHHHHHHHHHHHHHhCCCcch
Confidence            468999999999999999999999996

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=98.24  E-value=2.8e-06  Score=56.29  Aligned_cols=25  Identities=20%  Similarity=0.430  Sum_probs=23.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDK   25 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDK   25 (76)
                      +++++|.+|||++||++++.+|||+
T Consensus        73 v~~~As~~eIkkaYRrLa~~~HPDk   97 (116)
T PTZ00100         73 ISPTASKERIREAHKQLMLRNHPDN   97 (116)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999997

>KOG0722|consensus

Probab=98.14  E-value=2.1e-06  Score=64.40  Aligned_cols=48  Identities=17%  Similarity=0.316  Sum_probs=35.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhcCC
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEG   51 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw~~   51 (76)
                      ++++++.+||.||||++|+++|||++.+   ...+..-.++++.-++|-++
T Consensus        41 V~Rea~KseIakAYRqLARrhHPDr~r~---~e~k~~F~~iAtayeilkd~   88 (329)
T KOG0722|consen   41 VAREANKSEIAKAYRQLARRHHPDRNRD---PESKKLFVKIATAYEILKDN   88 (329)
T ss_pred             hhhhccHHHHHHHHHHHHHHhCCcccCC---chhhhhhhhhhcccccccch
Confidence            4688999999999999999999999874   22224445556666666543

>KOG0431|consensus

Probab=98.03  E-value=4e-06  Score=65.65  Aligned_cols=46  Identities=43%  Similarity=0.678  Sum_probs=37.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vL   48 (76)
                      |+...|+++|||+||+..+.+||||++.  .|..-.-+.|.+.+.++|
T Consensus       396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq--~gas~~qK~Iaekvfd~l  441 (453)
T KOG0431|consen  396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQ--KGASLEQKYIAEKVFDAL  441 (453)
T ss_pred             hhhccCHHHHHHHHHhhhheeCcccccC--CcccHHHHHHHHHHHHHH
Confidence            4567899999999999999999999994  456666667777777777

>PHA02624 large T antigen; Provisional

Probab=97.89  E-value=2.1e-05  Score=64.18  Aligned_cols=37  Identities=24%  Similarity=0.464  Sum_probs=29.0

Q ss_pred             CCCCC--CHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHH
Q psy5338           1 MSQLV--TPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLC   42 (76)
Q Consensus         1 ~~~~a--t~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~   42 (76)
                      |+++|  |.++||+|||++|+.+||||.     |.+..|+.|..
T Consensus        19 L~~~A~gs~~eIKkAYRkLAkkyHPDKg-----Gdeekfk~Ln~   57 (647)
T PHA02624         19 LPMAAWGNLPLMRKAYLRKCKEYHPDKG-----GDEEKMKRLNS   57 (647)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCcCCC-----CcHHHHHHHHH
Confidence            57889  999999999999999999984     33445554433

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.88  E-value=2.7e-05  Score=64.93  Aligned_cols=41  Identities=17%  Similarity=0.267  Sum_probs=32.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~   43 (76)
                      |+++|+.++||+|||++|+.+||||...  ..+...|+.+...
T Consensus        10 Vs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEA   50 (871)
T TIGR03835        10 IDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEA   50 (871)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHH
Confidence            5789999999999999999999999875  4445556554333

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0550|consensus

Probab=97.69  E-value=3.8e-05  Score=60.65  Aligned_cols=44  Identities=25%  Similarity=0.375  Sum_probs=36.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      +.++|+..|||+|||++|+.+|||++..-...+|..||..-..+
T Consensus       381 i~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy  424 (486)
T KOG0550|consen  381 ISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAY  424 (486)
T ss_pred             hhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHH
Confidence            46789999999999999999999998765557777788766553

>KOG0714|consensus

Probab=97.68  E-value=6.3e-05  Score=51.98  Aligned_cols=41  Identities=29%  Similarity=0.459  Sum_probs=29.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALL   41 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL   41 (76)
                      +.++|+.+||++||+++|+.+||||+..-...++..|..+-
T Consensus        11 i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~   51 (306)
T KOG0714|consen   11 IARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIA   51 (306)
T ss_pred             ccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhh
Confidence            35688999999999999999999996643223444444443

>KOG1150|consensus

Probab=97.52  E-value=0.0001  Score=53.83  Aligned_cols=38  Identities=37%  Similarity=0.495  Sum_probs=32.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIR   38 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R   38 (76)
                      |.+..|.++||+.||++...+|||||++..+.+..-|-
T Consensus        61 Idpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFd   98 (250)
T KOG1150|consen   61 IDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFD   98 (250)
T ss_pred             cCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHH
Confidence            46788999999999999999999999998776655553

>KOG0720|consensus

Probab=97.52  E-value=0.00011  Score=58.36  Aligned_cols=38  Identities=34%  Similarity=0.559  Sum_probs=30.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRAL   40 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~L   40 (76)
                      |+++++.++|||+||++|...||||+.  .++++.-|..|
T Consensus       243 l~~d~sd~~lKk~Yrk~A~LVhPDKn~--~~~A~Eafk~L  280 (490)
T KOG0720|consen  243 LPSDCSDADLKKNYRKKAMLVHPDKNM--IPRAEEAFKKL  280 (490)
T ss_pred             CCCCCCHHHHHHHHHhhceEeCCCccC--ChhHHHHHHHH
Confidence            467899999999999999999999998  44555555444

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=97.40  E-value=0.00049  Score=47.56  Aligned_cols=25  Identities=20%  Similarity=0.309  Sum_probs=22.5

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +++..+|+++||++++.+||||...
T Consensus        14 ~~d~~~L~~~yr~l~~~~HPDk~~~   38 (171)
T PRK05014         14 DIDTQLLASRYQELQRQFHPDKFAN   38 (171)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCCCCC
Confidence            4778999999999999999999764

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=97.21  E-value=0.00044  Score=47.69  Aligned_cols=25  Identities=24%  Similarity=0.267  Sum_probs=22.6

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +++.++|+++||++++.+||||...
T Consensus        15 ~id~~~L~~aYr~lq~~~HPDk~~~   39 (166)
T PRK01356         15 NIDLKILEKQYFAMQVKYHPDKAKT   39 (166)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCC
Confidence            3789999999999999999999763

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=97.20  E-value=0.0009  Score=46.59  Aligned_cols=25  Identities=28%  Similarity=0.511  Sum_probs=22.6

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +++..+|+++||++++.+|||+...
T Consensus        19 ~~d~~~L~~~yr~lq~~~HPD~~~~   43 (176)
T PRK03578         19 ALDEAALDAAYRTVQAQVHPDRFAA   43 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCC
Confidence            4688999999999999999999864

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=97.08  E-value=0.0014  Score=45.64  Aligned_cols=25  Identities=24%  Similarity=0.493  Sum_probs=22.3

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +.+.++|+++||++++.+|||+...
T Consensus        17 ~id~~~L~~~Yr~Lq~~~HPDk~~~   41 (173)
T PRK00294         17 RLDLDQLATRYRELAREVHPDRFAD   41 (173)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCC
Confidence            4678999999999999999999754

>KOG0624|consensus

Probab=96.98  E-value=0.00074  Score=53.11  Aligned_cols=47  Identities=19%  Similarity=0.348  Sum_probs=34.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~l~~vL   48 (76)
                      +.++|+..||-||||++|.+.|||-.++-.+  .+++.|-.+- ..-+||
T Consensus       402 VkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIA-AAKEVL  450 (504)
T KOG0624|consen  402 VKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIA-AAKEVL  450 (504)
T ss_pred             hcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHH-HHHHhh
Confidence            4689999999999999999999997765433  4555555443 234555

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=96.87  E-value=0.0027  Score=43.28  Aligned_cols=25  Identities=20%  Similarity=0.316  Sum_probs=21.8

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +.+..+|+++||++++.+|||+...
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~   26 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFAS   26 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCC
Confidence            3578899999999999999998653

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1789|consensus

Probab=96.57  E-value=0.0037  Score=54.90  Aligned_cols=38  Identities=34%  Similarity=0.471  Sum_probs=30.1

Q ss_pred             CHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHh
Q psy5338           6 TPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCS   43 (76)
Q Consensus         6 t~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~   43 (76)
                      ..+.|||+|+++|.+|||||+++=.+  .+.+..-.+|++
T Consensus      1298 ~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLSS 1337 (2235)
T ss_pred             cHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHH
Confidence            34889999999999999999996544  455666777774

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=96.12  E-value=0.003  Score=50.85  Aligned_cols=28  Identities=36%  Similarity=0.554  Sum_probs=25.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      |+++++..+|||+||++..++||||...
T Consensus       106 I~~~ts~rdik~~yr~Ls~KfhpdK~~~  133 (610)
T COG5407         106 IDQDTSERDIKKRYRMLSMKFHPDKAPP  133 (610)
T ss_pred             ccCCCcHHHHHHHHHhheeecChhhcCC
Confidence            4688999999999999999999999875

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=94.37  E-value=0.12  Score=35.95  Aligned_cols=25  Identities=20%  Similarity=0.306  Sum_probs=22.4

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +.+...+++.||++.+.+|||+...
T Consensus        15 ~iD~~~L~~~y~~Lq~~~HPD~f~~   39 (173)
T PRK01773         15 QLDNALLSERYLALQKSLHPDNFAN   39 (173)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCcccC
Confidence            4788999999999999999998764

>KOG0723|consensus

Probab=93.03  E-value=0.12  Score=34.28  Aligned_cols=42  Identities=24%  Similarity=0.343  Sum_probs=31.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCccc-chhchHHHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILE-WTEGKKGNIRALLC   42 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~-W~e~ke~n~R~LL~   42 (76)
                      ++++++.+.||.|.|+.....|||+=-. .-..+.++...+|.
T Consensus        64 v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAsKINEAKdlLe  106 (112)
T KOG0723|consen   64 VTPSLDKDKIKEAHRRIMLANHPDRGGSPYLASKINEAKDLLE  106 (112)
T ss_pred             CCccccHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999996331 11245566666664

>KOG0568|consensus

Probab=92.70  E-value=0.28  Score=36.96  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=30.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccch--h---chHHHHHHHHHh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWT--E---GKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~--e---~ke~n~R~LL~~   43 (76)
                      +..+|+++|++.||.++|+++|||-=.+-+  +   +-+.-||..|+.
T Consensus        55 v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   55 VEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             ccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            356899999999999999999999433211  1   233446655554

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=90.08  E-value=0.67  Score=30.24  Aligned_cols=47  Identities=19%  Similarity=0.306  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCcccch---hchHHHHHHHHHhhhhhhc
Q psy5338           3 QLVTPADVKKSYRKACLAVHPDKILEWT---EGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         3 ~~at~~eikkayr~~a~~~hPDKi~~W~---e~ke~n~R~LL~~l~~vLw   49 (76)
                      +..+..+++.|.|..-+..|||-...-.   +-.++.++.|.+-|+.+-=
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~   53 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK   53 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence            5667889999999999999999544332   2345557777776766653

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=85.63  E-value=1.4  Score=33.88  Aligned_cols=46  Identities=20%  Similarity=0.213  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      -|++.+|.++.++....|||||-..=.+.....|-.|+...-+||-
T Consensus        57 ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~  102 (379)
T COG5269          57 KAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLG  102 (379)
T ss_pred             CCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhc
Confidence            4788999999999999999997642222233445566666555553

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=85.29  E-value=1  Score=30.81  Aligned_cols=45  Identities=24%  Similarity=0.339  Sum_probs=30.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCccc------chhchHHHHHHHHHhhhh
Q psy5338           2 SQLVTPADVKKSYRKACLAVHPDKILE------WTEGKKGNIRALLCSLHT   46 (76)
Q Consensus         2 ~~~at~~eikkayr~~a~~~hPDKi~~------W~e~ke~n~R~LL~~l~~   46 (76)
                      ...+...+|+++||++...+|||+...      +-+..+..+..+...+..
T Consensus       122 ~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~  172 (174)
T COG1076         122 EIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED  172 (174)
T ss_pred             chhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh
Confidence            346778999999999999999996542      123444455555555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	76
1n4c_A	182	Nmr Structure Of The J-Domain And Clathrin Substrat		3e-12
1xi5_J	114	Clathrin D6 Coat With Auxilin J-Domain Length = 114		4e-12
2qwo_B	92	Crystal Structure Of Disulfide-Bond-Crosslinked Com		9e-12
2qwn_B	94	Crystal Structure Of Disulfide-Bond-Crosslinked Com		9e-12
1nz6_A	101	Crystal Structure Of Auxilin J-Domain Length = 101		9e-11
3ag7_A	106	An Auxilin-Like J-Domain Containing Protein, Jac1 J		3e-07

>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate Binding Domain Of Bovine Auxilin Length = 182

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 25  KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 90  KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 142

>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain Length = 114

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
          KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 22 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 74

>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi Form #1 Length = 92

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
          KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 6  KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 58

>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 94

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
          KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 7  KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 59

>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain Length = 101

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 25 KILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
          KILEW EGK+ NIRALL + HT+LW G  KWK    + LVTP  VKK YRKA 
Sbjct: 9  KILEWIEGKERNIRALLSTXHTVLWAGETKWKPVGXADLVTPEQVKKVYRKAV 61

>pdb|3AG7|A Chain A, An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 25 KILEWTEGKKGNIRALLCSLHTILWEGAKWK-CEMSQLVTPADVKKSYRKAC 75
          KI +W+ GK GNIR+LL +L  ILW G+ WK   +  ++    V+KSY++A 
Sbjct: 14 KIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	76
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	9e-19
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	4e-07
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	3e-17
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	4e-07
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	1e-16
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	9e-07
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 72.3 bits (177), Expect = 9e-19
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 24 DKILEWTEGKKGNIRALLCSLHTILWEGAKWK-CEMSQLVTPADVKKSYRKAC 75
           KI +W+ GK GNIR+LL +L  ILW G+ WK   +  ++    V+KSY++A 
Sbjct: 13 AKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 42.7 bits (100), Expect = 4e-07
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDKI 26
          +  ++    V+KSY++A L +HPDK+
Sbjct: 48 LMDMIEGNAVRKSYQRALLILHPDKL 73

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 70.6 bits (172), Expect = 3e-17
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 8   ADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPA 65
           A+++K      +     KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP 
Sbjct: 73  AEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPE 132

Query: 66  DVKKSYRKAC 75
            VKK YRKA 
Sbjct: 133 QVKKVYRKAV 142

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 43.7 bits (102), Expect = 4e-07
 Identities = 18/26 (69%), Positives = 19/26 (73%)

Query: 1   MSQLVTPADVKKSYRKACLAVHPDKI 26
           M+ LVTP  VKK YRKA L VHPDK 
Sbjct: 125 MADLVTPEQVKKVYRKAVLVVHPDKA 150

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 66.6 bits (162), Expect = 1e-16
 Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)

Query: 24 DKILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 5  LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 58

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 41.5 bits (97), Expect = 9e-07
 Identities = 17/26 (65%), Positives = 18/26 (69%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDKI 26
          M+ LVTP  VKK YRKA L VHP K 
Sbjct: 41 MADLVTPEQVKKVYRKAVLVVHPCKA 66

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDK 25
           S       ++K+Y K C   HPDK
Sbjct: 18 RSAWGNIPLMRKAYLKKCKEFHPDK 42

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 35.6 bits (81), Expect = 5e-04
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 15/64 (23%)

Query: 6   TPADVKKSYRKACLAVHPD------KILE--WTEGKKGNIRALLCSLH--TILWEGAKWK 55
            PA+ +K + +  L+V P        +L   W +  K ++  ++  LH  +++    K  
Sbjct: 367 EPAEYRKMFDR--LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV---EKQP 421

Query: 56  CEMS 59
            E +
Sbjct: 422 KEST 425

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	76
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.51
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.28
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.1
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	98.98
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	98.97
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	98.96
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	98.86
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	98.84
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	98.83
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	98.83
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	98.82
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	98.79
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	98.79
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	98.78
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	98.75
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	98.72
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	98.7
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	98.7
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	98.7
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	98.69
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	98.68
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	98.64
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	98.63
2guz_A	71	Mitochondrial import inner membrane translocase su	98.62
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	98.6
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	98.54
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	98.53
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	98.46
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	98.45
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.33
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	98.22
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	98.19
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	98.18
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	98.11
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	98.11
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	97.96
2guz_B	65	Mitochondrial import inner membrane translocase su	97.64
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	96.37
1gv2_A	105	C-MYB, MYB proto-oncogene protein; transcription,	85.16

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.51  E-value=2.8e-15  Score=94.31  Aligned_cols=52  Identities=63%  Similarity=1.105  Sum_probs=49.5

Q ss_pred             CcccchhchHHHHHHHHHhhhhhhcCC-CCc-cccccccCCchhHHHHHHhhcC
Q psy5338          25 KILEWTEGKKGNIRALLCSLHTILWEG-AKW-KCEMSQLVTPADVKKSYRKACT   76 (76)
Q Consensus        25 Ki~~W~e~ke~n~R~LL~~l~~vLw~~-~~w-~v~~~~l~~~~~vK~~y~ka~~   76 (76)
                      ||..|++|+++|+|+||++|+.|||+| +.| .++++...++.+||++|||+.+
T Consensus         6 ~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal   59 (92)
T 2qwo_B            6 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVL   59 (92)
T ss_dssp             HHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999997 899 9999999999999999999863

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.28  E-value=1.3e-12  Score=90.61  Aligned_cols=71  Identities=52%  Similarity=0.903  Sum_probs=64.0

Q ss_pred             CCCHHHHHHHHHHHHHHhCCC--CcccchhchHHHHHHHHHhhhhhhcCC-CCc-cccccccCCchhHHHHHHhhcC
Q psy5338           4 LVTPADVKKSYRKACLAVHPD--KILEWTEGKKGNIRALLCSLHTILWEG-AKW-KCEMSQLVTPADVKKSYRKACT   76 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPD--Ki~~W~e~ke~n~R~LL~~l~~vLw~~-~~w-~v~~~~l~~~~~vK~~y~ka~~   76 (76)
                      ..|.+++++  .++|+..+|.  ++.+|.+++++|||+||++|+.|||++ ..| -+++....++.+||++|||+++
T Consensus        69 ~~~~~~~r~--~~~a~~~D~l~~~i~~W~~gk~~niRaLLssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal  143 (182)
T 1n4c_A           69 PRTIAEMRK--EEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVL  143 (182)
T ss_dssp             CCCTHHHHH--HHHHTCCCTTTHHHHHHHHHHTTCHHHHHHHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred             cchHHHHHH--HHHHHhccHHHHHHHHHHcccHHHHHHHHHHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHH
Confidence            457899999  6669999997  788999999999999999999999996 577 9999999999999999999863

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.10  E-value=1.6e-11  Score=78.25  Aligned_cols=53  Identities=42%  Similarity=0.854  Sum_probs=49.0

Q ss_pred             CCcccchhchHHHHHHHHHhhhhhhcCCCCc-cccccccCCchhHHHHHHhhcC
Q psy5338          24 DKILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLVTPADVKKSYRKACT   76 (76)
Q Consensus        24 DKi~~W~e~ke~n~R~LL~~l~~vLw~~~~w-~v~~~~l~~~~~vK~~y~ka~~   76 (76)
                      +++..|++++++|+|+||++++.++|++.+| .|...+..++.+||++|||+.+
T Consensus        13 ~~i~~W~~~~~~~ir~lL~~l~~~l~~~~d~Y~vl~~~~As~~eIKkAYRklal   66 (106)
T 3ag7_A           13 AKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALL   66 (106)
T ss_dssp             HHHHHHHTTTTTCHHHHHTTGGGTSCTTSCCCCCCGGGSCSHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHhcccCCHHHHcCCCCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999 9988888889999999999863

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.98  E-value=6.1e-10  Score=68.82  Aligned_cols=47  Identities=21%  Similarity=0.222  Sum_probs=37.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTI   47 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~v   47 (76)
                      |+++||.+|||+|||++|+.+||||+.+-.+.++..|..|...++.+
T Consensus        24 v~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL   70 (88)
T 1iur_A           24 QAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL   70 (88)
T ss_dssp             HTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999998764445667777776665543

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=98.97  E-value=2.1e-10  Score=71.90  Aligned_cols=44  Identities=43%  Similarity=0.414  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~l   44 (76)
                      |+++||++|||||||++|+.+||||+++-..  .++..|..+-..+
T Consensus        41 v~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAy   86 (92)
T 2qwo_B           41 MADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAW   86 (92)
T ss_dssp             GGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHH
Confidence            4678999999999999999999999985321  2555676665544

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.96  E-value=1.4e-09  Score=66.81  Aligned_cols=45  Identities=24%  Similarity=0.485  Sum_probs=36.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTI   47 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~v   47 (76)
                      |+++||.+|||+|||++++.+||||+..  ++....|+.|...++.+
T Consensus        35 v~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L   79 (90)
T 2ys8_A           35 VKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTAL   79 (90)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999874  46667777776665443

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=3.5e-09  Score=63.23  Aligned_cols=45  Identities=27%  Similarity=0.388  Sum_probs=35.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |++++|.+|||+|||++++.+||||+..-.+.++..|+.|...++
T Consensus        17 v~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~   61 (82)
T 2ej7_A           17 VPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYE   61 (82)
T ss_dssp             CCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999987543445556666555544

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=4.3e-09  Score=64.29  Aligned_cols=44  Identities=30%  Similarity=0.448  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |++++|.+|||+|||++++.+||||+..-.+.++..|+.|...+
T Consensus        17 v~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay   60 (92)
T 2dmx_A           17 VQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAY   60 (92)
T ss_dssp             CCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHH
Confidence            57899999999999999999999998754344555666655544

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=98.83  E-value=7.2e-09  Score=63.00  Aligned_cols=43  Identities=28%  Similarity=0.433  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |+++||.+|||+|||++++.+||||+..  +..+..|+.|...++
T Consensus        25 v~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~   67 (88)
T 2cug_A           25 VSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYE   67 (88)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHH
Confidence            5789999999999999999999999874  455666666555443

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=7.3e-09  Score=62.98  Aligned_cols=43  Identities=19%  Similarity=0.377  Sum_probs=33.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |+++||.+|||+|||++++.+||||+.  .+.++..|+.|...++
T Consensus        15 v~~~as~~eIk~ayr~l~~~~HPDk~~--~~~a~~~f~~i~~Ay~   57 (88)
T 2ctr_A           15 VPKSASERQIKKAFHKLAMKYHPDKNK--SPDAEAKFREIAEAYE   57 (88)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHTCTTTCC--SHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHH
Confidence            578999999999999999999999987  3445556666555443

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.82  E-value=7.6e-09  Score=61.23  Aligned_cols=43  Identities=23%  Similarity=0.492  Sum_probs=34.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |+++||.++||+|||++++.+||||+..  ++....|+.|...++
T Consensus        11 v~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~   53 (77)
T 1hdj_A           11 LARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYD   53 (77)
T ss_dssp             CCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHH
Confidence            5789999999999999999999999874  455666666655543

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=98.79  E-value=1.1e-08  Score=63.99  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=34.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..-.+.++..|+.|...+
T Consensus        10 v~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY   53 (99)
T 2lgw_A           10 VPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAY   53 (99)
T ss_dssp             SCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHH
Confidence            57899999999999999999999998754334555666655544

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.4e-08  Score=60.23  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=33.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |++++|.++||+|||++++.+||||+..- +.+...|+.|...+
T Consensus        15 v~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay   57 (79)
T 2dn9_A           15 VPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAY   57 (79)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHH
Confidence            57899999999999999999999998742 34555565555444

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=8.6e-09  Score=61.11  Aligned_cols=43  Identities=30%  Similarity=0.465  Sum_probs=34.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |++++|.+|||+|||++++.+||||+..  ++....|+.|...++
T Consensus        15 v~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~   57 (78)
T 2ctp_A           15 VSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYA   57 (78)
T ss_dssp             CCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHH
Confidence            5789999999999999999999999873  455666666555543

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.75  E-value=1.5e-08  Score=62.81  Aligned_cols=43  Identities=19%  Similarity=0.333  Sum_probs=33.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..- +.+...|+.|...+
T Consensus        25 v~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay   67 (99)
T 2yua_A           25 VPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAY   67 (99)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHH
Confidence            57899999999999999999999998642 33455566555544

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=98.72  E-value=2.2e-08  Score=63.19  Aligned_cols=43  Identities=30%  Similarity=0.417  Sum_probs=32.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..- +.+...|+.|...+
T Consensus        25 v~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay   67 (109)
T 2ctw_A           25 LDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAH   67 (109)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHH
Confidence            57899999999999999999999998742 33445555544443

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=2.4e-08  Score=63.19  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=33.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..- +.++..|+.|...+
T Consensus        28 v~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay   70 (112)
T 2ctq_A           28 CDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAK   70 (112)
T ss_dssp             CCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHH
Confidence            57899999999999999999999998742 34555565554443

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=98.70  E-value=3.2e-08  Score=58.03  Aligned_cols=40  Identities=25%  Similarity=0.415  Sum_probs=31.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |++++|.++||+|||++++.+||||+.+    ....|+.|...+
T Consensus        16 l~~~a~~~eIk~ayr~l~~~~HPD~~~~----~~~~f~~i~~Ay   55 (73)
T 2och_A           16 VKPDASDNELKKAYRKMALKFHPDKNPD----GAEQFKQISQAY   55 (73)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHTCTTTCTT----CHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCcC----HHHHHHHHHHHH
Confidence            5789999999999999999999999863    234555554443

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=98.70  E-value=1e-08  Score=62.45  Aligned_cols=45  Identities=22%  Similarity=0.195  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc-----hhchHHHHHHHHHhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW-----TEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W-----~e~ke~n~R~LL~~l~   45 (76)
                      |+++||.+|||+|||++++.+||||+..-     .+.....|+.|...++
T Consensus        24 v~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~   73 (94)
T 1wjz_A           24 ADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWK   73 (94)
T ss_dssp             CCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHH
Confidence            57899999999999999999999998631     1345555665555443

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=98.69  E-value=2.2e-08  Score=60.26  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=30.5

Q ss_pred             CCCC--CCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQL--VTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~--at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++  +|.++||+|||++|+.+||||..     ....|+.|...+
T Consensus        19 l~~~~~a~~~eIk~aYr~la~~~HPDk~~-----~~~~f~~i~~AY   59 (79)
T 1faf_A           19 LPRQLWGDFGRMQQAYKQQSLLLHPDKGG-----SHALMQELNSLW   59 (79)
T ss_dssp             CCSSSTTCHHHHHHHHHHHHHHSSGGGSC-----CHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCcCCCC-----CHHHHHHHHHHH
Confidence            4667  99999999999999999999864     344566555544

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=98.68  E-value=3.8e-08  Score=60.28  Aligned_cols=40  Identities=30%  Similarity=0.418  Sum_probs=30.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |++++|.+|||+|||++++.+||||+..-    ...|+.|...+
T Consensus        16 v~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay   55 (92)
T 2o37_A           16 VSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAF   55 (92)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHH
Confidence            57899999999999999999999998632    33455444433

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=98.64  E-value=4e-08  Score=65.67  Aligned_cols=42  Identities=19%  Similarity=0.413  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~   43 (76)
                      |+++||.+|||+|||++++.+||||+..- +.+...|+.|...
T Consensus        10 ~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~A   51 (210)
T 3apq_A           10 VSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRA   51 (210)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHH
Confidence            57899999999999999999999998642 3455556655443

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=98.63  E-value=1.2e-08  Score=64.76  Aligned_cols=44  Identities=25%  Similarity=0.361  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCcccch---h---chHHHHHHHHHhhhhhh
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILEWT---E---GKKGNIRALLCSLHTIL   48 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~W~---e---~ke~n~R~LL~~l~~vL   48 (76)
                      .||.+|||+|||++|+.+||||+++-.   +   .++..|+.|-..+ +||
T Consensus        51 ~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AY-evL  100 (106)
T 3ag7_A           51 MIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAW-DHF  100 (106)
T ss_dssp             SCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHH-HHH
T ss_pred             CCCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHH-HHH
Confidence            499999999999999999999987411   1   2356677665544 444

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.62  E-value=5.6e-08  Score=57.27  Aligned_cols=40  Identities=28%  Similarity=0.265  Sum_probs=30.2

Q ss_pred             CCC-CCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhh
Q psy5338           1 MSQ-LVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLH   45 (76)
Q Consensus         1 ~~~-~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~   45 (76)
                      |++ ++|.+|||+|||++++.+||||.     +....|..|...++
T Consensus        22 l~~~~a~~~eIk~ayr~l~~~~HPDk~-----g~~~~f~~i~~Aye   62 (71)
T 2guz_A           22 LTENTLTKKKLKEVHRKIMLANHPDKG-----GSPFLATKINEAKD   62 (71)
T ss_dssp             CCTTTCCHHHHHHHHHHHHHHHCGGGT-----CCHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCC-----CCHHHHHHHHHHHH
Confidence            456 69999999999999999999984     33345555555443

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=98.60  E-value=4.4e-08  Score=61.01  Aligned_cols=43  Identities=14%  Similarity=0.351  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..- +.++..|+.|...+
T Consensus        11 v~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay   53 (103)
T 1bq0_A           11 VSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAY   53 (103)
T ss_dssp             SCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHH
Confidence            57899999999999999999999998742 33445555554443

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=98.54  E-value=5.7e-08  Score=67.24  Aligned_cols=44  Identities=45%  Similarity=0.474  Sum_probs=33.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++++.+||||+..-..  .++..|..|...+
T Consensus       125 v~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAY  170 (182)
T 1n4c_A          125 MADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAW  170 (182)
T ss_dssp             GGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHH
Confidence            4678999999999999999999999875321  1455666655544

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=98.53  E-value=6.2e-08  Score=60.76  Aligned_cols=44  Identities=16%  Similarity=0.239  Sum_probs=32.5

Q ss_pred             CCCCC-CHHHHHHHHHHHHHHhCCCCccc--chhchHHHHHHHHHhh
Q psy5338           1 MSQLV-TPADVKKSYRKACLAVHPDKILE--WTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~a-t~~eikkayr~~a~~~hPDKi~~--W~e~ke~n~R~LL~~l   44 (76)
                      |+++| |.+|||+|||++++.+||||+..  -.+.+...|+.|...+
T Consensus        23 v~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY   69 (109)
T 2qsa_A           23 VNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAY   69 (109)
T ss_dssp             CCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHH
Confidence            46788 99999999999999999999864  1123445555555444

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=98.46  E-value=5.7e-08  Score=62.45  Aligned_cols=28  Identities=29%  Similarity=0.424  Sum_probs=25.3

Q ss_pred             CCCCCCH--HHHHHHHHHHHHHhCCCCccc
Q psy5338           1 MSQLVTP--ADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         1 ~~~~at~--~eikkayr~~a~~~hPDKi~~   28 (76)
                      |+++|+.  ++||+|||++|+.+||||+.+
T Consensus        16 v~~~as~~~~eIk~aYr~la~~~HPDk~~~   45 (114)
T 1gh6_A           16 LERSAWGNIPLMRKAYLKKCKEFHPDKGGD   45 (114)
T ss_dssp             CCTTSCSCHHHHHHHHHHTTTTCCTTTCCT
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence            5678888  999999999999999999764

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=98.45  E-value=3.3e-07  Score=60.43  Aligned_cols=29  Identities=31%  Similarity=0.375  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      |+++|+.++||+|||++++.+||||+..-
T Consensus        18 v~~~a~~~eIk~aYr~l~~~~HPDk~~~~   46 (155)
T 2l6l_A           18 ADPSANISDLKQKYQKLILMYHPDKQSTD   46 (155)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC
Confidence            57899999999999999999999998753

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.33  E-value=6.3e-08  Score=71.42  Aligned_cols=42  Identities=19%  Similarity=0.287  Sum_probs=0.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |+++||.+|||+|||++|+.+||||+.+  +.++..|+.|...+
T Consensus        36 v~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay   77 (329)
T 3lz8_A           36 VQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAW   77 (329)
T ss_dssp             --------------------------------------------
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHH
Confidence            5789999999999999999999999873  35666676665544

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=98.22  E-value=1.6e-06  Score=58.68  Aligned_cols=29  Identities=14%  Similarity=0.190  Sum_probs=25.9

Q ss_pred             CCCCC--CHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           1 MSQLV--TPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         1 ~~~~a--t~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      |++++  |.++||++||++++.+||||+..-
T Consensus         9 l~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~   39 (171)
T 1fpo_A            9 LPARYQLDTQALSLRFQDLQRQYHPDKFASG   39 (171)
T ss_dssp             CCSSSCCCHHHHHHHHHHHHHHTCGGGGTTS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhCcCCCCCC
Confidence            46777  999999999999999999998753

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=98.19  E-value=1.1e-06  Score=60.42  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=27.8

Q ss_pred             CCCCCC--HHHHHHHHHHHHHHhCCCCcccchh-chHHHHHHHHHh
Q psy5338           1 MSQLVT--PADVKKSYRKACLAVHPDKILEWTE-GKKGNIRALLCS   43 (76)
Q Consensus         1 ~~~~at--~~eikkayr~~a~~~hPDKi~~W~e-~ke~n~R~LL~~   43 (76)
                      |+++|+  .+|||+|||++|+.+||||+.+-.. ...+....+|++
T Consensus        19 l~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsd   64 (174)
T 2pf4_E           19 LERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMED   64 (174)
T ss_dssp             CCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCC
Confidence            467787  5999999999999999999764110 233444444544

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=98.11  E-value=3.6e-06  Score=58.65  Aligned_cols=26  Identities=27%  Similarity=0.374  Sum_probs=23.5

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      +++.++||++||++++.+||||+..-
T Consensus        56 ~a~~~eIk~aYr~L~~~~HPDk~~~~   81 (207)
T 3bvo_A           56 RVDTAKLQHRYQQLQRLVHPDFFSQR   81 (207)
T ss_dssp             CCCHHHHHHHHHHHHHHHCGGGGTTS
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCC
Confidence            37899999999999999999998753

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=98.11  E-value=1.3e-06  Score=59.81  Aligned_cols=26  Identities=23%  Similarity=0.396  Sum_probs=24.0

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           3 QLVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         3 ~~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      .+||.++||++||++++.+||||+..
T Consensus        28 ~~a~~~eIk~aYr~la~~~HPDk~~~   53 (181)
T 3uo3_A           28 WTIDQSRLRKEYRQLQAQHHPDMAQQ   53 (181)
T ss_dssp             SCCCHHHHHHHHHHHHHTCCTTSCCS
T ss_pred             CCCCHHHHHHHHHHHHHHhCcCCCcc
Confidence            37999999999999999999999874

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=97.96  E-value=1.4e-06  Score=67.84  Aligned_cols=39  Identities=21%  Similarity=0.480  Sum_probs=15.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHH
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRAL   40 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~L   40 (76)
                      |+++||.+|||+|||++|+.+||||+..- +.++..|+.|
T Consensus        29 ~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i   67 (780)
T 3apo_A           29 VSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKI   67 (780)
T ss_dssp             CCTTCCHHHHHHHHCC------------------------
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHH
Confidence            57899999999999999999999998532 2334444433

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=97.64  E-value=2.7e-05  Score=45.75  Aligned_cols=22  Identities=5%  Similarity=0.036  Sum_probs=20.9

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCc
Q psy5338           5 VTPADVKKSYRKACLAVHPDKI   26 (76)
Q Consensus         5 at~~eikkayr~~a~~~hPDKi   26 (76)
                      ++.++|+++||++....||||=
T Consensus        19 a~~~~Ik~~yr~Lm~~nhPDkG   40 (65)
T 2guz_B           19 LNMDKINNRFNYLFEVNDKEKG   40 (65)
T ss_dssp             CSHHHHHHHHHHHHHHTCGGGT
T ss_pred             CCHHHHHHHHHHHHHHhCCCCC
Confidence            8999999999999999999983

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=96.37  E-value=0.0035  Score=43.33  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=30.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCcccch--hchHHHHHHHHHh
Q psy5338           2 SQLVTPADVKKSYRKACLAVHPDKILEWT--EGKKGNIRALLCS   43 (76)
Q Consensus         2 ~~~at~~eikkayr~~a~~~hPDKi~~W~--e~ke~n~R~LL~~   43 (76)
                      .+.++.++++++|+++++..|||+...-.  +..+..|+.|...
T Consensus       391 ~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~a  434 (450)
T 2y4t_A          391 KRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAA  434 (450)
T ss_dssp             STTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHH
Confidence            46778899999999999999999887432  2345555555443

>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A

Probab=85.16  E-value=2.2  Score=25.50  Aligned_cols=63  Identities=19%  Similarity=0.357  Sum_probs=44.4

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCC-CcccchhchHHHHHHHHHhhhhhhcCCCCc-cccccccC--CchhHHHHHHhhc
Q psy5338           3 QLVTPADVKKSYRKACLAVHPD-KILEWTEGKKGNIRALLCSLHTILWEGAKW-KCEMSQLV--TPADVKKSYRKAC   75 (76)
Q Consensus         3 ~~at~~eikkayr~~a~~~hPD-Ki~~W~e~ke~n~R~LL~~l~~vLw~~~~w-~v~~~~l~--~~~~vK~~y~ka~   75 (76)
                      ++.|..+++..|+..   .+|+ +-..|++.+...+..++..+      |..| .|+- .|-  ++.+||..|...+
T Consensus        35 ~~Rt~~qcr~Rw~~~---l~p~~~~~~Wt~eEd~~L~~~~~~~------G~~W~~Ia~-~l~gRt~~~~k~rw~~~~  101 (105)
T 1gv2_A           35 KGRIGKQCRERWHNH---LNPEVKKTSWTEEEDRIIYQAHKRL------GNRWAEIAK-LLPGRTDNAIKNHWNSTM  101 (105)
T ss_dssp             TTCCHHHHHHHHHHT---TCCCCCCCCCCHHHHHHHHHHHHHH------SSCHHHHHT-TCTTCCHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHhc---cCCcccccCCCHHHHHHHHHHHHHh------CCCHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence            356788888877763   6787 55679887777777776665      4689 8763 232  5688999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	76
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-16
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	0.003

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.6 bits (157), Expect = 3e-16
 Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)

Query: 24 DKILEWTEGKKGNIRALLCSLHTILWEG-AKWK-CEMSQLVTPADVKKSYRKAC 75
           KILEW EGK+ NIRALL ++HT+LW G  KWK   M+ LVTP  VKK YRKA 
Sbjct: 5  LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV 58

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 31.5 bits (71), Expect = 0.003
 Identities = 18/25 (72%), Positives = 19/25 (76%)

Query: 1  MSQLVTPADVKKSYRKACLAVHPDK 25
          M+ LVTP  VKK YRKA L VHPDK
Sbjct: 41 MADLVTPEQVKKVYRKAVLVVHPDK 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	76
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.49
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	98.95
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	98.92
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	98.64
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	98.6
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	98.6
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	98.54
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	98.51
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	98.31

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.49  E-value=2.2e-15  Score=93.71  Aligned_cols=51  Identities=65%  Similarity=1.135  Sum_probs=48.5

Q ss_pred             CcccchhchHHHHHHHHHhhhhhhcCC-CCc-cccccccCCchhHHHHHHhhc
Q psy5338          25 KILEWTEGKKGNIRALLCSLHTILWEG-AKW-KCEMSQLVTPADVKKSYRKAC   75 (76)
Q Consensus        25 Ki~~W~e~ke~n~R~LL~~l~~vLw~~-~~w-~v~~~~l~~~~~vK~~y~ka~   75 (76)
                      ||.+|++|+++|+|+||++|++|||+| ..| +++|++++++.+||++|++++
T Consensus         6 ~i~~W~~~~~~~ir~lL~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~   58 (98)
T d1nz6a_           6 KILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAV   58 (98)
T ss_dssp             HHHHHHTTTTTCHHHHHTTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHH
T ss_pred             HHHHHHhcchhhHHHHHHhhhhhcCCcccCCeecCCCccCCHHHHHHHHHHHH
Confidence            788999999999999999999999997 589 999999999999999999986

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=4.1e-10  Score=68.45  Aligned_cols=47  Identities=21%  Similarity=0.222  Sum_probs=38.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTI   47 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~v   47 (76)
                      ++.+||.+|||+|||++++.+||||+++-.+.+...|..|-..+..+
T Consensus        24 v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L   70 (88)
T d1iura_          24 QAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL   70 (88)
T ss_dssp             HTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999998875556677787777766543

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=1.2e-09  Score=64.00  Aligned_cols=47  Identities=15%  Similarity=0.312  Sum_probs=34.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+|||+|||++++.+||||+..- +..+..|+ .++...+||-
T Consensus        11 v~~~As~~eIk~aYr~l~~~~HPDk~~~~-~~~~~~f~-~i~~Ay~vL~   57 (75)
T d1xbla_          11 VSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFK-EIKEAYEVLT   57 (75)
T ss_dssp             CSSSCCHHHHHHHHHHHHHHTCCTTCTTT-CHHHHHHH-HHHHHHHHTT
T ss_pred             CCCCcCHHHHHHHHHHHHhhhhhhccCCC-hHHHHHHH-HHHHHHHhcC
Confidence            67899999999999999999999998742 22333344 4555556664

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=98.64  E-value=9.7e-09  Score=63.88  Aligned_cols=28  Identities=29%  Similarity=0.459  Sum_probs=24.5

Q ss_pred             CCCCC--CHHHHHHHHHHHHHHhCCCCccc
Q psy5338           1 MSQLV--TPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         1 ~~~~a--t~~eikkayr~~a~~~hPDKi~~   28 (76)
                      |+++|  |.++||+|||++|+.+||||+.+
T Consensus        16 v~~~a~~~~~~IKkAYrkla~k~HPDk~~~   45 (114)
T d1gh6a_          16 LERSAWGNIPLMRKAYLKKCKEFHPDKGGD   45 (114)
T ss_dssp             CCTTSCSCHHHHHHHHHHTTTTCCTTTCCT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhcccchhh
Confidence            56778  67899999999999999999763

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=1.4e-08  Score=61.64  Aligned_cols=29  Identities=31%  Similarity=0.373  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEW   29 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W   29 (76)
                      |+++||.+|||+||+++++.+||||+..-
T Consensus        24 v~~~as~~eIk~aY~~l~~~~HPDk~~~~   52 (94)
T d1wjza_          24 ADPSANMSDLKQKYQKLILLYHPDKQSAD   52 (94)
T ss_dssp             CCTTCCHHHHHHHHHHTTSSSCSTTCCTT
T ss_pred             CCCCcCHHHHHHHHHHHHHHhhhhhcccc
Confidence            57899999999999999999999998753

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=3.9e-08  Score=57.41  Aligned_cols=46  Identities=24%  Similarity=0.445  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhhhhhhc
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSLHTILW   49 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l~~vLw   49 (76)
                      |+++||.+||++|||++++.+|||+...  +.....| ..|....+||-
T Consensus        11 v~~~as~~eIk~ay~~l~~~~hPD~~~~--~~~~~~~-~~i~~Ay~vLs   56 (77)
T d1hdja_          11 LARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKF-KEIAEAYDVLS   56 (77)
T ss_dssp             CCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHH-HHHHHHHHHTT
T ss_pred             CCCCcCHHHHHHHHHHHHHHhccccccc--hhHHHHH-HHHHHHHHHhc
Confidence            6789999999999999999999998874  2333334 45556666664

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=98.54  E-value=4.2e-08  Score=58.33  Aligned_cols=39  Identities=18%  Similarity=0.314  Sum_probs=29.6

Q ss_pred             CCCCC--CHHHHHHHHHHHHHHhCCCCcccchhchHHHHHHHHHhh
Q psy5338           1 MSQLV--TPADVKKSYRKACLAVHPDKILEWTEGKKGNIRALLCSL   44 (76)
Q Consensus         1 ~~~~a--t~~eikkayr~~a~~~hPDKi~~W~e~ke~n~R~LL~~l   44 (76)
                      |++++  |.++||+|||++++.+||||..     .+..|+.|...+
T Consensus        19 l~~~~~~~~~~IkkaYr~l~~~~HPDk~g-----~~e~~~~in~Ay   59 (79)
T d1fafa_          19 LPRQLWGDFGRMQQAYKQQSLLLHPDKGG-----SHALMQELNSLW   59 (79)
T ss_dssp             CCSSSTTCHHHHHHHHHHHHHHSSGGGSC-----CHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhCcccCC-----CHHHHHHHHHHH
Confidence            45666  8999999999999999999854     334566555544

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.51  E-value=2.2e-08  Score=61.41  Aligned_cols=47  Identities=43%  Similarity=0.447  Sum_probs=33.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCcccchh--chHHHHHHHHHhhhhhh
Q psy5338           1 MSQLVTPADVKKSYRKACLAVHPDKILEWTE--GKKGNIRALLCSLHTIL   48 (76)
Q Consensus         1 ~~~~at~~eikkayr~~a~~~hPDKi~~W~e--~ke~n~R~LL~~l~~vL   48 (76)
                      |+..+|+++||+|||++++.+||||+..-..  .++..|. .+...-+||
T Consensus        41 l~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~-~I~~Ay~~L   89 (98)
T d1nz6a_          41 MADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFM-ELNDAWSEF   89 (98)
T ss_dssp             GGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHH-HHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHH-HHHHHHHHH
Confidence            3567999999999999999999999875322  2333444 444444555

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.31  E-value=4.7e-07  Score=52.34  Aligned_cols=25  Identities=16%  Similarity=0.280  Sum_probs=22.2

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCccc
Q psy5338           4 LVTPADVKKSYRKACLAVHPDKILE   28 (76)
Q Consensus         4 ~at~~eikkayr~~a~~~hPDKi~~   28 (76)
                      +++.+|||+|||++++.+||||...
T Consensus        14 ~~d~~eIk~aYr~l~~~~HPDk~~~   38 (76)
T d1fpoa1          14 QLDTQALSLRFQDLQRQYHPDKFAS   38 (76)
T ss_dssp             CCCHHHHHHHHHHHHHHTCGGGGTT
T ss_pred             CCCHHHHHHHHHHHHHHhCcccccc
Confidence            4568999999999999999999764