Psyllid ID: psy5556

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrscntgglglrncntgglglrncntgglglrncntgglglrncntrglvaftgptqag
Flexible Loop (DISEMBL)
msgglglrncntgglglrncntggLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGglglrncntrglvaftgptqag
Low Complexity Region (SEG)
MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG
Disordered region (IsUnstruct)
******LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFT******
Disordered Region (DISOPRED)
*********CNTGGL*LR*CNTG*LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG***********
Disordered Region (DISEMBL)
MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG
Disordered Region (DISPRO)
****LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR*CNTR************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q6C908	1634	Actin cytoskeleton-regula	yes	N/A	0.869	0.061	0.336	4e-07

>sp|Q6C908|PAN1_YARLI Actin cytoskeleton-regulatory complex protein PAN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAN1 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 1   MSGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
           ++GG+ L+   TG +  L+  +TG   L++  TGG  L++  TGG  L++  TGG  L+S
Sbjct: 399 ITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQS 458

Query: 60  CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
             TGG  L+  +TG   L+  +TG   L+  +TG +  +  
Sbjct: 459 QLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGYMPQQQT 499

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
440906263	154	hypothetical protein M91_19203, partial	0.904	0.675	0.384	1e-23
395503012	1709	PREDICTED: X-linked retinitis pigmentosa	0.747	0.050	0.29	8e-14
156402770	156	predicted protein [Nematostella vectensi	0.895	0.660	0.310	1e-12
156385484	151	predicted protein [Nematostella vectensi	0.852	0.649	0.5	3e-12
156408239	301	predicted protein [Nematostella vectensi	0.773	0.295	0.391	5e-11
156402772	123	predicted protein [Nematostella vectensi	0.895	0.837	0.300	5e-11
260819543	697	hypothetical protein BRAFLDRAFT_85244 [B	0.817	0.134	0.211	7e-11
350412375	3430	PREDICTED: hypothetical protein LOC10074	0.956	0.032	0.3	4e-10
156339202	239	hypothetical protein NEMVEDRAFT_v1g66646	0.686	0.330	0.292	4e-10
440893796	158	hypothetical protein M91_13311, partial	0.843	0.613	0.422	5e-10

>gi|440906263|gb|ELR56546.1| hypothetical protein M91_19203, partial [Bos grunniens mutus]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 72/104 (69%)

Query: 2   SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
           +  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR C+
Sbjct: 38  TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 97

Query: 62  TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
           T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T+ +
Sbjct: 98  TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYI 141

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395503012|ref|XP_003755867.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 [Sarcophilus harrisii]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 42/100 (42%)

Query: 2    SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
               L + N N     + NC    L L NC+     L NC    L L + +   L + +C+
Sbjct: 1218 EAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKLSLEDYDEAKLAIENCD 1277

Query: 62   TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
                 L NC+   L L NC+     + NC+   L L NC+
Sbjct: 1278 EENKSLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCD 1317

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156402770|ref|XP_001639763.1| predicted protein [Nematostella vectensis] gi|156226893|gb|EDO47700.1| predicted protein [Nematostella vectensis]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%)

Query: 3   GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
             LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  + 
Sbjct: 11  PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 70

Query: 63  GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
             LGL+  +   LGL+  +   LGL+  +   LGLR  +   L
Sbjct: 71  PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPAL 113

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|156385484|ref|XP_001633660.1| predicted protein [Nematostella vectensis] gi|156220733|gb|EDO41597.1| predicted protein [Nematostella vectensis]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 50/98 (51%)

Query: 7   LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
           LR C T G  LR C T G  LR C T G  LR C T G  LR C T G  LR C T G  
Sbjct: 3   LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62

Query: 67  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
           LR C T G  LR C T G  +R C T G  LR C T G
Sbjct: 63  LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSG 100

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|156408239|ref|XP_001641764.1| predicted protein [Nematostella vectensis] gi|156228904|gb|EDO49701.1| predicted protein [Nematostella vectensis]

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 47/97 (48%)

Query: 6   GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
           GLR  +T   GLR  +T   GLR  +T    LR  +T   GLR  +T    LR  +T   
Sbjct: 186 GLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDTEQPRLRPLDTEQP 245

Query: 66  GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
            LR  +T   GLR  NT   GLR  +T   GLR  +T
Sbjct: 246 RLRPLDTKQPGLRPLNTKQPGLRPLDTEQPGLRPLDT 282

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|156402772|ref|XP_001639764.1| predicted protein [Nematostella vectensis] gi|156226894|gb|EDO47701.1| predicted protein [Nematostella vectensis]

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%)

Query: 3   GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
             LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  + 
Sbjct: 19  SALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 78

Query: 63  GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
             LGL+  +   LGL+  +   LGL+  +   LGL+  +   L
Sbjct: 79  SALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 121

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|260819543|ref|XP_002605096.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae] gi|229290426|gb|EEN61106.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 59/104 (56%)

Query: 1   MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
            S G  +++C + G  +++C + G  +++C + G  +++C + G  +++C + G     C
Sbjct: 316 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDC 375

Query: 61  NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
            + G  +++C + G  +++C + G  +++C + G  +++C + G
Sbjct: 376 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 419

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350412375|ref|XP_003489624.1| PREDICTED: hypothetical protein LOC100746973 [Bombus impatiens]

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 44/110 (40%)

Query: 4    GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
            G  +    T G  +    T G G+    T G G+    T G G+    T G G+    T 
Sbjct: 1760 GPTVEEKPTEGPTVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTE 1819

Query: 64   GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
            G G+    T G G+    T G G+    T G G+    T G VA   PT+
Sbjct: 1820 GPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGSVAEEKPTE 1869

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156339202|ref|XP_001620110.1| hypothetical protein NEMVEDRAFT_v1g66646 [Nematostella vectensis] gi|156204499|gb|EDO28010.1| predicted protein [Nematostella vectensis]

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%)

Query: 4   GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
            + LR C+   + LR C    + L  C+   + LR C+   + LR C+   + LR C+  
Sbjct: 38  SVHLRMCSVCSVHLRMCGVRSVHLPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSAC 97

Query: 64  GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
            + LR C+   + LR C+   + LR C+   + LR C+ 
Sbjct: 98  SVHLRMCSACSVHLRMCSACSVHLRMCSVCSVDLRMCSV 136

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|440893796|gb|ELR46445.1| hypothetical protein M91_13311, partial [Bos grunniens mutus]

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 50/97 (51%)

Query: 4   GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
           G  LR+C   G  LR+C   G  LR+C   G  LR+C   G  LR+C   G  LRSC   
Sbjct: 10  GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 69

Query: 64  GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
           G  LR+C   G  LR+C   G  LR+C   G  LR+C
Sbjct: 70  GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 106

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
WB|WBGene00001599	974	glh-2 [Caenorhabditis elegans	0.973	0.114	0.403	2.1e-14
UNIPROTKB|Q966L9	974	glh-2 "ATP-dependent RNA helic	0.973	0.114	0.403	2.1e-14
UNIPROTKB|Q6MWX9	3157	PPE55 "PPE FAMILY PROTEIN" [My	0.878	0.031	0.432	7.7e-13
UNIPROTKB|Q6MX48	963	PPE6 "PPE family protein" [Myc	0.921	0.110	0.394	2.2e-12
UNIPROTKB|P42611	487	ppe10 "Uncharacterized PPE fam	0.991	0.234	0.324	9e-12
UNIPROTKB|Q79FI9	1459	PPE34 "Uncharacterized protein	0.878	0.069	0.377	1.9e-10
UNIPROTKB|Q79FL2	1053	ppe24 "Uncharacterized PPE fam	0.860	0.094	0.382	4.3e-10
UNIPROTKB|Q79FW4	645	ppe12 "Uncharacterized PPE fam	0.991	0.176	0.316	4.3e-09
UNIPROTKB|Q6MWY2	2523	ppe54 "Uncharacterized PPE fam	0.913	0.041	0.359	1.4e-08
WB|WBGene00001598	763	glh-1 [Caenorhabditis elegans	0.930	0.140	0.363	1e-07

WB|WBGene00001599 glh-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 197 (74.4 bits), Expect = 2.1e-14, P = 2.1e-14
 Identities = 46/114 (40%), Positives = 56/114 (49%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
             +GG G  + N GG G  + N GG G  + N GG G  + N GG G    N GG G  S N
Sbjct:    73 AGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGN 132

Query:    62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
              GG GL + N GG G  + N GG G  + N GG G  +    G   F G  +AG
Sbjct:   133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGG-TGF-GSGKAG 184

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0004386 "helicase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006915 "apoptotic process" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0016070 "RNA metabolic process" evidence=ISS

GO:0043186 "P granule" evidence=IDA

GO:0003724 "RNA helicase activity" evidence=IDA

GO:0008432 "JUN kinase binding" evidence=IPI

GO:0043621 "protein self-association" evidence=IPI

UNIPROTKB|Q966L9 glh-2 "ATP-dependent RNA helicase glh-2" [Caenorhabditis elegans (taxid:6239)]

 Score = 197 (74.4 bits), Expect = 2.1e-14, P = 2.1e-14
 Identities = 46/114 (40%), Positives = 56/114 (49%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
             +GG G  + N GG G  + N GG G  + N GG G  + N GG G    N GG G  S N
Sbjct:    73 AGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGN 132

Query:    62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
              GG GL + N GG G  + N GG G  + N GG G  +    G   F G  +AG
Sbjct:   133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGG-TGF-GSGKAG 184

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q6MWX9 PPE55 "PPE FAMILY PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 188 (71.2 bits), Expect = 7.7e-13, P = 7.7e-13
 Identities = 45/104 (43%), Positives = 50/104 (48%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
             +G LGL N  TG +G  N  TG  GL N  +   G+ N  TG  GL N    NTG     
Sbjct:  1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566

Query:    59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
             S NTG L   N NTGG    N NTG     + NTGG    N NT
Sbjct:  1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610

GO:0052556 "positive regulation by symbiont of host immune response" evidence=IDA

UNIPROTKB|Q6MX48 PPE6 "PPE family protein" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 178 (67.7 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 43/109 (39%), Positives = 50/109 (45%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
             S  +GL N  +G +GL N  TG  G+ N  TG  GL N    NTG     + NTGG    
Sbjct:   289 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 348

Query:    59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
             S NTG     N NTG     N NTG     + NTG     N NT   +A
Sbjct:   349 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|P42611 ppe10 "Uncharacterized PPE family protein PPE10" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 168 (64.2 bits), Expect = 9.0e-12, P = 9.0e-12
 Identities = 38/117 (32%), Positives = 55/117 (47%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRS 59
             SG +G  N     +G  N  TG +G  N  +G LGL N   G +G  N  +G  G G+  
Sbjct:   197 SGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITG 256

Query:    60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL-VAFTGPTQAG 115
              +  G G  N  +G +G  N  TG +GL N  +G +G+ N  +    +  +G   AG
Sbjct:   257 DHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAG 313

GO:0042783 "active evasion of host immune response" evidence=IMP

UNIPROTKB|Q79FI9 PPE34 "Uncharacterized protein" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 40/106 (37%), Positives = 50/106 (47%)

Query:     2 SGGLG-LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLG 56
             + G G +   N G L L + N GG   GL N  +  +GL N   G +G  N   G  G G
Sbjct:   210 NSGFGQMGAANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFG 269

Query:    57 LRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
             L   N  G G  N  TG +GL N  TG +G+ N  TG  G+ N  T
Sbjct:   270 LTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGT 315

GO:0005576 "extracellular region" evidence=IDA

GO:0052553 "modulation by symbiont of host immune response" evidence=IDA

UNIPROTKB|Q79FL2 ppe24 "Uncharacterized PPE family protein PPE24" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 157 (60.3 bits), Expect = 4.3e-10, P = 4.3e-10
 Identities = 39/102 (38%), Positives = 47/102 (46%)

Query:     4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
             G+G  N  TG  GL N  +G +G  N   G  G+ N    NTGG    + NTG     S 
Sbjct:   310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369

Query:    61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
             NTG L + N NTG L   + N G     + NTG     N NT
Sbjct:   370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411

GO:0040007 "growth" evidence=IMP

UNIPROTKB|Q79FW4 ppe12 "Uncharacterized PPE family protein PPE12" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 145 (56.1 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 37/117 (31%), Positives = 50/117 (42%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRS 59
             +G +G+ N   G  G  N     +GL N   G +G  N  +   G  N   N  G+GL  
Sbjct:   300 NGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTG 359

Query:    60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TRGLVAFTGPTQAG 115
              N  G G  N  +G +G  N  TG +G  N  +G  G+ N   T   VA +G    G
Sbjct:   360 SNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTG 416

GO:0040007 "growth" evidence=IMP

UNIPROTKB|Q6MWY2 ppe54 "Uncharacterized PPE family protein PPE54" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 147 (56.8 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 41/114 (35%), Positives = 52/114 (45%)

Query:     1 MSGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGL 57
             +SGG LG  N   G +G  N     +G  N  +   GL N   G +GL N   G  G+GL
Sbjct:   731 LSGGALGGNNFGLGNIGFDN-----VGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGL 785

Query:    58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF-TG 110
                N  G G  N  +  +GL N  TG +G  N  TG LG+ N  +     F TG
Sbjct:   786 SGDNLTGFGGFNSGSENVGLFNSGTGNVGFFNSGTGNLGVFNSGSHNTGFFLTG 839

GO:0040007 "growth" evidence=IMP

GO:0052170 "negative regulation by symbiont of host innate immune response" evidence=IDA

WB|WBGene00001598 glh-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 40/110 (36%), Positives = 46/110 (41%)

Query:     2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
             SGG G    N GG G      GG G    NTGG G    NTGG G     TGG G    N
Sbjct:    20 SGG-GFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGN 78

Query:    62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-GLGLRNCNTRGLVAFTG 110
             T G G    +TGG      ++G  G     +G G G ++    G   F G
Sbjct:    79 TCGSGFGGGSTGGSPYGGASSG-FGGSTATSGFGSGEKSSAFGGSGGFGG 127

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0004386 "helicase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006915 "apoptotic process" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0016070 "RNA metabolic process" evidence=ISS

GO:0043186 "P granule" evidence=IDA

GO:0003724 "RNA helicase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008432 "JUN kinase binding" evidence=IPI

GO:0043621 "protein self-association" evidence=IPI

GO:0017151 "DEAD/H-box RNA helicase binding" evidence=IPI

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	115
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	2e-05
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	9e-04

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 14/98 (14%), Positives = 19/98 (19%)

Query: 7   LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
              CN  G    +         +C       R  N   +                   L 
Sbjct: 97  FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVHFNQTRLVESEFFEVTWXXLL 156

Query: 67  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
           L  C+       N +  GL         L        G
Sbjct: 157 LEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSG 194

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 36.0 bits (83), Expect = 9e-04
 Identities = 13/99 (13%), Positives = 21/99 (21%)

Query: 7   LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
             + +   +    CN  G    +         +C       R  N   +           
Sbjct: 87  WLSGSFHRVTFLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVHFNQTRLVESE 146

Query: 67  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
                   L L  C+       N +  GL         L
Sbjct: 147 FFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERL 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00