Psyllid ID: psy5732

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
Protein Sequence
MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAALHMPMDSTLDNIDDALSDPGGGDTSPVP
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHEEEEEEEEcHHHHHHccccccccEEEEEccccccccccccccccccccccccccEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccEEEccccEEccccccEEcccccccccccccccccEEEEEEcccEEEEcccEEEEEccccccccccccccccccEEEEEEccEEEEcccHHHHHcccccccccccccccEEEEEEEEEEEccccEEEEcccccEEcccccccccccccccEEEEEEccEEcccccccccccccEEEEcccEEEEEcccccccccHHHHHHHHHHcccccccccccccEEEEEcccccEEEEEccHHHHHHHHHEEEEccHHHHHHHHHHEEEEEEEEEEcccccccEEEccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEcccccccEEEEEEEHHHHHHHHHHHEEHHHHHHHcHHHHHHHcccccccEEEEEHHHHcHccccccccccEEEccccccccEEEEEEEccccEEEEEccccccccccccccHHHHHHccccccHHccccEEEEcccccEccHHHHHHHHcccccccEcccccccEEEEEEEcccEEccccEEEEEcccccccccccccccccEEEEEEEcccEEEEcHHHHHHHHccccEEEEcccccEEEEEEEEEEcccccEEEEEcccccccccccccccccccHHHHHHHHccccccccccEcccccccEEEcccEEEEEcccccccccccHHHHHHHHcccccccccccccccEEccccccEEEEEccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHEEEEcccccccccccccHHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mprkkktpvedliippqdqkicgticiCQMTAVLSTVALVYLTVAIYMPYMRAvqsgidtspvmctTTRAVIIEtctwgscgewclsktsgACAQIYVSLRhngsnllfvnctnsanktcygidqenAKKYRCIADECknltgtfnctqgtcinitdafecdfretdsplkcsgrrgkinciamhglqncvrgtcerirtpyncdrrcvdiptrnknviVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFnvnntsrgiealdcingsvldrsaltdltnftflNYLNIYnatildkdrqiappeqdLLLANESRLLINLEGCVNTLRDECKEFLREFgkdgtdhnararfpcfysekipgtviARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGeaalhmpmdstldniddalsdpgggdtspvp
Flexible Loop (DISEMBL)
mprkkktpvedliippqdqkiCGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIamhglqncvrgtcerirtpyncdrrcvdiptrNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLRefgkdgtdhnararfpcfysekipgtVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAALHMPMDSTLDNIDDALsdpgggdtspvp
Low Complexity Region (SEG)
MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAALHMPMDSTLDNIDDALSDPGGGDTSPVP
Disordered region (IsUnstruct)
***********LIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGD*****************************************
Disordered Region (DISOPRED)
**************PPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAA****************************
Disordered Region (DISEMBL)
********VEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAALHMPMDSTLDNIDDALSD**********
Disordered Region (DISPRO)
******TPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKG*******************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFKKKGEAALHMPMDSTLDNIDDALSDPGGGDTSPVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
91092214	450	PREDICTED: similar to AGAP002819-PA [Tri	0.982	0.991	0.706	0.0
383861779	446	PREDICTED: uncharacterized protein LOC10	0.975	0.993	0.685	0.0
328791764	446	PREDICTED: hypothetical protein LOC10057	0.975	0.993	0.682	0.0
380028641	446	PREDICTED: uncharacterized protein LOC10	0.975	0.993	0.680	0.0
242020100	445	conserved hypothetical protein [Pediculu	0.916	0.934	0.731	0.0
307200252	446	hypothetical protein EAI_15321 [Harpegna	0.973	0.991	0.686	0.0
350419486	447	PREDICTED: hypothetical protein LOC10074	0.977	0.993	0.678	0.0
340709659	447	PREDICTED: hypothetical protein LOC10064	0.977	0.993	0.680	0.0
380028643	452	PREDICTED: uncharacterized protein LOC10	0.918	0.922	0.714	0.0
312382102	786	hypothetical protein AND_05497 [Anophele	0.914	0.527	0.715	1e-180

>gi|91092214|ref|XP_969938.1| PREDICTED: similar to AGAP002819-PA [Tribolium castaneum] gi|270014434|gb|EFA10882.1| hypothetical protein TcasGA2_TC001706 [Tribolium castaneum]

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/450 (70%), Positives = 377/450 (83%), Gaps = 4/450 (0%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP+KK  PVEDLIIPPQD +ICGTIC+CQMT VLS+VA+VYLTVAIY+P  RA++SGI  
Sbjct: 1   MPKKKPVPVEDLIIPPQDTRICGTICLCQMTLVLSSVAIVYLTVAIYVPSTRALKSGISE 60

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTTTRAV +E C WGSCGEWCLSKTSGAC QIYV+LRHNGSNLL  NCTN+ANKTC
Sbjct: 61  DPVMCTTTRAVQVEACDWGSCGEWCLSKTSGACMQIYVNLRHNGSNLLLANCTNTANKTC 120

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK RCIAD+CKNLTGTFNCT G CINITDAFEC F++TD PLKCSGRRGKI 
Sbjct: 121 YGIDQENAKKSRCIADDCKNLTGTFNCTTGMCINITDAFECIFKDTDPPLKCSGRRGKIT 180

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI ++GL +C RGTCERIRTPYNCDRRCVDIPTRNKNVI+LSGD+VYLSQCQ+A+ L++ 
Sbjct: 181 CIDLNGLYSCNRGTCERIRTPYNCDRRCVDIPTRNKNVILLSGDKVYLSQCQRAIDLDSG 240

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
           E E+W E Q+NI+M+SC+N+ NT+RG+ A+DC+NGS+L  + L DLTNFT+L+YL+++N 
Sbjct: 241 E-EVWNESQDNIMMSSCYNILNTTRGVVAIDCVNGSLLPNNVLNDLTNFTYLSYLSVFNT 299

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R IAPPE DLL+ANES+LLINLEGCVNTLRDECKEFLR +GKDGTDHNARARFP
Sbjct: 300 VPLDEKRIIAPPEPDLLIANESKLLINLEGCVNTLRDECKEFLRVYGKDGTDHNARARFP 359

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           CFYS   PG V+ARF+L+ T ++F+I   +P +L +VSCLTLILCQRTV VGDDAKMRF+
Sbjct: 360 CFYSNDNPGVVVARFDLATTTKQFLIASVLPTVLFVVSCLTLILCQRTVVVGDDAKMRFQ 419

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDT 450
                       +T  N    ++D GGG++
Sbjct: 420 SCVAGDGETIEKTTSAN---NMTDRGGGNS 446

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861779|ref|XP_003706362.1| PREDICTED: uncharacterized protein LOC100878121 [Megachile rotundata]

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/451 (68%), Positives = 369/451 (81%), Gaps = 8/451 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS +L  NCTN+ NKTC
Sbjct: 59  VPVMCTTIRAVNADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSTILLANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNC+ G CINITDAFEC F +TD P+KCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCSSGVCINITDAFECIFHDTDPPMKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+LSGD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLSGDKVYLSQCERAIDV-QT 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  LTDLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLTDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL E+GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHEYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E   G V++RFNL  TY+EF+I   +P IL +VSCLTLI CQRTV VGDDAKMRF 
Sbjct: 358 CYYAESNTGIVVSRFNLENTYKEFLIALLLPSILFVVSCLTLIFCQRTVVVGDDAKMRF- 416

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDTS 451
            KG    H  ++ +       L D GGG+++
Sbjct: 417 -KGTVGAHGSIEKSASG---NLGDAGGGNSA 443

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791764|ref|XP_003251631.1| PREDICTED: hypothetical protein LOC100577273 [Apis mellifera]

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/451 (68%), Positives = 369/451 (81%), Gaps = 8/451 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS +L  NCTN+ NKTC
Sbjct: 59  VPVMCTTIRAVNADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSRILLANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNC+ G CINITDAFEC F +TD P+KCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCSSGVCINITDAFECIFHDTDPPMKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+L+GD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLTGDKVYLSQCERAIDV-QT 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  LTDLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLTDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL E+GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHEYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E   G V++RFNL  TY+EFMI   +P IL +VSCLTLI CQ+TV VGDDAKMRFK
Sbjct: 358 CYYAESNTGIVVSRFNLENTYKEFMIALLLPSILFVVSCLTLIFCQKTVVVGDDAKMRFK 417

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDTS 451
               A   M   ++ +     L D GGG+++
Sbjct: 418 GTVGALSSMEKSASGN-----LGDAGGGNSA 443

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028641|ref|XP_003698002.1| PREDICTED: uncharacterized protein LOC100863035 isoform 1 [Apis florea]

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/451 (68%), Positives = 369/451 (81%), Gaps = 8/451 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS +L  NCTN+ NKTC
Sbjct: 59  VPVMCTTIRAVNADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSTILLANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNC+ G CINITDAFEC F +TD P+KCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCSSGVCINITDAFECIFHDTDPPMKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+L+GD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLTGDKVYLSQCERAIDV-QT 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  LTDLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLTDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL E+GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHEYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E   G V++RFNL  TY+EF+I   +P IL +VSCLTLI CQ+TV VGDDAKMRFK
Sbjct: 358 CYYAESNTGIVVSRFNLENTYKEFLIALLLPSILFVVSCLTLIFCQKTVVVGDDAKMRFK 417

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDTS 451
               A   M   ++ +     L D GGG+++
Sbjct: 418 GTVGALSSMEKSASGN-----LGDAGGGNSA 443

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242020100|ref|XP_002430494.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212515651|gb|EEB17756.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/417 (73%), Positives = 358/417 (85%), Gaps = 1/417 (0%)

Query: 4   KKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPV 63
           KKK P EDL+IPPQDQ+ICGTICICQMTAVLSTVALVYLTVAIY+P M+A QSGI   PV
Sbjct: 3   KKKIPPEDLLIPPQDQRICGTICICQMTAVLSTVALVYLTVAIYVPSMKAFQSGISEVPV 62

Query: 64  MCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGI 123
           MCTT RAV  ETC W SCGEWCLSK+SGAC QI V  R NGS+LLF NCTN+ANKTCYGI
Sbjct: 63  MCTTLRAVNNETCKWESCGEWCLSKSSGACIQIIVHSRRNGSDLLFANCTNTANKTCYGI 122

Query: 124 DQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIA 183
           DQE+A KYRCIADECKNLTGTFNC+ G CINITDAFEC+F+ TD P KCSGRRGKI C  
Sbjct: 123 DQESAVKYRCIADECKNLTGTFNCSAGVCINITDAFECEFKMTDPPSKCSGRRGKITCST 182

Query: 184 MHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQE 243
           + GLQ C RGTCERIRTPYNCDRRCVDIPTRNKN+I+LSGD+ YLSQC+KA+ + +++QE
Sbjct: 183 IEGLQYCDRGTCERIRTPYNCDRRCVDIPTRNKNIILLSGDQAYLSQCRKAIDI-DSDQE 241

Query: 244 IWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATIL 303
           IW E+  NILMASC+ V NTS G+EA+DCING++L ++AL D+TNFT+L YL+++++  L
Sbjct: 242 IWNENNGNILMASCYKVTNTSNGVEAVDCINGTLLPKTALHDVTNFTYLAYLSVWSSVPL 301

Query: 304 DKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFY 363
           D+ + IAPPE +L++ANESRL INL+GCVNTLRDECKEFLRE+GKDGTDHNARARFPC+Y
Sbjct: 302 DERKLIAPPEHELIIANESRLKINLDGCVNTLRDECKEFLREYGKDGTDHNARARFPCYY 361

Query: 364 SEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           SE  P  V+ARF+L+ TY+EF+I   +P +L +VSCLTL+LCQRTV VGDDAKMRFK
Sbjct: 362 SENNPDMVVARFDLATTYKEFLIASVLPSVLFVVSCLTLLLCQRTVVVGDDAKMRFK 418

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200252|gb|EFN80531.1| hypothetical protein EAI_15321 [Harpegnathos saltator]

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/450 (68%), Positives = 366/450 (81%), Gaps = 8/450 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MPR    PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MPRP--VPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS +L  NCTN+ NKTC
Sbjct: 59  VPVMCTTIRAVNADNCDWGSCGEWCLSKTSGPCVQIHVNLRRNGSTILLANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNC+ GTCINITDAFEC F +TD PLKCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCSAGTCINITDAFECMFHDTDPPLKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+LSGD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLSGDKVYLSQCERAIDV-ET 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  LTDLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLTDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD D+ +APPEQ L++ANESRLLINLEGCVNTLRDECKEFL E+GKDG+DHNARARFP
Sbjct: 298 KPLDADKLVAPPEQSLIIANESRLLINLEGCVNTLRDECKEFLHEYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E     V++RFNL  TY+EF+I   +P IL +VSCLTLI CQRTV VGDDAKMRFK
Sbjct: 358 CYYAEDNTDVVVSRFNLQTTYKEFLIALLLPSILFVVSCLTLIFCQRTVVVGDDAKMRFK 417

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDT 450
                 + +   ++ +     L D GGGD+
Sbjct: 418 GTPGTLVSIEKSASGN-----LGDAGGGDS 442

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419486|ref|XP_003492197.1| PREDICTED: hypothetical protein LOC100747979 [Bombus impatiens]

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/451 (67%), Positives = 367/451 (81%), Gaps = 7/451 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RA+  + C WGSCGEWCLSKTSG C QI+V+LR NGS ++  NCTN+ NKTC
Sbjct: 59  IPVMCTTIRAINADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSAIILANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNCT G CINITDAFEC F +TD PLKCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCTSGVCINITDAFECIFHDTDPPLKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+LSGD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLSGDKVYLSQCERAIDV-ET 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  L+DLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLSDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL  +GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHVYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E     V++RFNL  TY+EF+I   +P +L ++SCLTLI CQRTV VGDDAKMRFK
Sbjct: 358 CYYAEGNTEVVVSRFNLESTYKEFLIALVLPSVLFVISCLTLIFCQRTVVVGDDAKMRFK 417

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDTS 451
               A L     S   N+ DA    GGG+++
Sbjct: 418 GTVGAGLTSIEKSASGNLGDA----GGGNSA 444

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709659|ref|XP_003393420.1| PREDICTED: hypothetical protein LOC100642796 [Bombus terrestris]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/451 (68%), Positives = 366/451 (81%), Gaps = 7/451 (1%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSFVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS ++  NCTN+ NKTC
Sbjct: 59  IPVMCTTIRAVNADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSAIILANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNCT G CINITDAFEC F +TD P+KCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCTSGVCINITDAFECIFHDTDPPMKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+LSGD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLSGDKVYLSQCERAIDV-ET 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  L+DLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLSDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL  +GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHVYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E   G V++RFNL  TY+EF+I    P +L ++SCLTLI CQRTV VGDDAKMRFK
Sbjct: 358 CYYAEGDTGIVVSRFNLESTYKEFLISLVFPSVLFVISCLTLIFCQRTVVVGDDAKMRFK 417

Query: 421 KKGEAALHMPMDSTLDNIDDALSDPGGGDTS 451
               A L     S   N+ DA    GGG+++
Sbjct: 418 GTVGAGLTSIEKSASGNLGDA----GGGNSA 444

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028643|ref|XP_003698003.1| PREDICTED: uncharacterized protein LOC100863035 isoform 2 [Apis florea]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/420 (71%), Positives = 356/420 (84%), Gaps = 3/420 (0%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           MP  K+ PVE+L+IPPQD +ICGTICICQMTAVLS+VALVYLTVAIYMP  RA QSGI  
Sbjct: 1   MP--KQVPVENLVIPPQDGRICGTICICQMTAVLSSVALVYLTVAIYMPSTRAFQSGISE 58

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
            PVMCTT RAV  + C WGSCGEWCLSKTSG C QI+V+LR NGS +L  NCTN+ NKTC
Sbjct: 59  VPVMCTTIRAVNADNCEWGSCGEWCLSKTSGPCVQIHVNLRRNGSTILLANCTNTTNKTC 118

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK +CIADEC+NLTGTFNC+ G CINITDAFEC F +TD P+KCSGRRGKI 
Sbjct: 119 YGIDQENAKKSKCIADECRNLTGTFNCSSGVCINITDAFECIFHDTDPPMKCSGRRGKIT 178

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL NC RGTCERIRTPYNCDRRCVDIPTRNKN+I+L+GD+VYLSQC++A+ +  T
Sbjct: 179 CIDIDGLFNCNRGTCERIRTPYNCDRRCVDIPTRNKNMILLTGDKVYLSQCERAIDV-QT 237

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
            +EIW ED+ +++MASC+ + N++ G+EA+DCINGSVL++  LTDLTNFT+L+YLNI+  
Sbjct: 238 NREIWHEDRGDVMMASCYGIFNSTLGVEAVDCINGSVLEKDLLTDLTNFTYLSYLNIFAT 297

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
             LD+ R +APPEQDL++ANESRLLINLEGCVNTLR+ECKEFL E+GKDG+DHNARARFP
Sbjct: 298 KPLDETRMVAPPEQDLIIANESRLLINLEGCVNTLREECKEFLHEYGKDGSDHNARARFP 357

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
           C+Y+E   G V++RFNL  TY+EF+I   +P IL +VSCLTLI CQ+TV VGDDAKMRFK
Sbjct: 358 CYYAESNTGIVVSRFNLENTYKEFLIALLLPSILFVVSCLTLIFCQKTVVVGDDAKMRFK 417

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312382102|gb|EFR27669.1| hypothetical protein AND_05497 [Anopheles darlingi]

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/419 (71%), Positives = 353/419 (84%), Gaps = 4/419 (0%)

Query: 1   MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
           M +KK TP+EDLIIPPQD +ICG IC+CQ+T VLSTVA+VYLTVAIYMP  RA +SGID 
Sbjct: 1   MGKKKPTPIEDLIIPPQDTRICGIICVCQLTFVLSTVAIVYLTVAIYMPSSRAFKSGIDE 60

Query: 61  SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
           +PVMCTTTRA+  + C WGSCGEWCLSKTSGAC QIYV LR NGS+LLF NCTNSANKTC
Sbjct: 61  TPVMCTTTRALNQDACEWGSCGEWCLSKTSGACIQIYVHLRMNGSSLLFTNCTNSANKTC 120

Query: 121 YGIDQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKIN 180
           YGIDQENAKK RCIADECKNLTGTFNCT G CINITDAFEC F+ TD PLKCSGRRGKI 
Sbjct: 121 YGIDQENAKKSRCIADECKNLTGTFNCTDGMCINITDAFECVFKNTDPPLKCSGRRGKIT 180

Query: 181 CIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNT 240
           CI + GL +C RGTC +IRTPYNCDRRCVDIPTRNKN+I+LSGD+VYLSQC  A+ +  T
Sbjct: 181 CIDIKGLFSCHRGTCRKIRTPYNCDRRCVDIPTRNKNMILLSGDKVYLSQCSSAIDM-ET 239

Query: 241 EQEIWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNA 300
           +QE+W E ++ ++M+SC+++ NTS GIEA DC+NGSVL+++ LTDLTNFT+L+YL+    
Sbjct: 240 KQEVWNEAEDKVIMSSCYSIQNTSLGIEANDCVNGSVLEKTELTDLTNFTYLSYLHY--- 296

Query: 301 TILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFP 360
            +    + IAP E DL ++NESRL+INLEGCVNTL+DECKEFL+EFGKDGTDHNARARFP
Sbjct: 297 AVSKPVKVIAPLESDLTMSNESRLMINLEGCVNTLQDECKEFLKEFGKDGTDHNARARFP 356

Query: 361 CFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRF 419
           CFYS+     V+ARFNL  TYR+F++GFF+P IL  +SC+TLI CQRT+ VGDDAKMRF
Sbjct: 357 CFYSKSQMTQVVARFNLETTYRQFVVGFFIPTILFGISCMTLIFCQRTITVGDDAKMRF 415

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
FB|FBgn0040697	448	Teh3 "tipE homolog 3" [Drosoph	0.909	0.921	0.685	1e-162
FB|FBgn0035504	524	Teh4 "tipE homolog 4" [Drosoph	0.896	0.776	0.384	3.2e-81
FB|FBgn0037766	279	Teh1 "tipE homolog 1" [Drosoph	0.220	0.358	0.283	9.4e-10
FB|FBgn0035505	313	Teh2 "tipE homolog 2" [Drosoph	0.242	0.351	0.279	1.3e-09
FB|FBgn0003710	452	tipE "temperature-induced para	0.209	0.210	0.278	1.5e-05

FB|FBgn0040697 Teh3 "tipE homolog 3" [Drosophila melanogaster (taxid:7227)]

 Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
 Identities = 286/417 (68%), Positives = 341/417 (81%)

Query:     4 KKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPV 63
             KKK PVEDL++PPQD +ICGTICICQMT VLS+VALVYLTVAIYMP  RA +SGID +PV
Sbjct:     3 KKKVPVEDLVVPPQDTRICGTICICQMTLVLSSVALVYLTVAIYMPSTRAFKSGIDPTPV 62

Query:    64 MCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGI 123
             MCTTTRAV  + C WGSCGEWCLSKTSGAC QIYV+LR NGSNL+F NCTNSANKTCYGI
Sbjct:    63 MCTTTRAVNKDNCEWGSCGEWCLSKTSGACIQIYVNLRSNGSNLIFQNCTNSANKTCYGI 122

Query:   124 DQENAKKYRCIADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKINCIA 183
             DQ+ A K RCI DECKNLTGTFNCT G C+NITDAFEC F  +D+P+KCSGRRGKINC+ 
Sbjct:   123 DQDRADKARCINDECKNLTGTFNCTAGQCLNITDAFECIFHNSDAPVKCSGRRGKINCMD 182

Query:   184 MHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNNTEQE 243
             + GL +C RGTC +IRTPYNCDRRCVDIPTRNKNV+VLSGD+VYLSQCQ A+     E E
Sbjct:   183 ISGLYSCSRGTCRKIRTPYNCDRRCVDIPTRNKNVVVLSGDKVYLSQCQNAINAETLE-E 241

Query:   244 IWTEDQNNILMASCFNVNNTSRGIEALDCINGSVLDRSALTDLTNFTFLNYLNIYNATIL 303
             +W E   N+ M SC+ + +TS  ++A+DCINGS L+ + L+DLTNFT+L++L++  AT +
Sbjct:   242 VWNESSENVAMTSCYFIRHTSDQVDAVDCINGSTLETNMLSDLTNFTYLSHLHVSVATPV 301

Query:   304 DKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARARFPCFY 363
                 +IAPP+ DL ++NES+L+INLEGCVNTL DECKEFL++FG+DG+DHNARARFPCFY
Sbjct:   302 P---EIAPPDVDLTISNESKLMINLEGCVNTLMDECKEFLKDFGRDGSDHNARARFPCFY 358

Query:   364 SEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLILCQRTVEVGDDAKMRFK 420
             S      V+ARF+L  TYR+F+    VP +L +VSC  LI+CQ TV VGDDAKMRFK
Sbjct:   359 SPGKKDVVVARFDLEVTYRQFVFASVVPSVLFVVSCSILIMCQTTVYVGDDAKMRFK 415

GO:0017080 "sodium channel regulator activity" evidence=IDA

GO:0002028 "regulation of sodium ion transport" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM

FB|FBgn0035504 Teh4 "tipE homolog 4" [Drosophila melanogaster (taxid:7227)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 167/434 (38%), Positives = 249/434 (57%)

Query:     1 MPRKKKTPVEDLIIPPQDQKICGTICICQMTAVLSTVALVYLTVAIYMPYMRAVQSGIDT 60
             M R+K  P    +IP QD +IC  IC+CQ+T VLS V++VYL+VAIY P ++A +SG + 
Sbjct:     1 MGRRKDKP---RVIPEQDARICRAICLCQLTMVLSCVSIVYLSVAIYSPSLKAFKSGFEL 57

Query:    61 SPVMCTTTRAVIIETCTWGSCGEWCLSKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTC 120
              PVMC T    +   C W SCGEWCL+KTSG C QI+  +R NG+++   NCT   N +C
Sbjct:    58 DPVMCQTVDRQMPNNCPWASCGEWCLTKTSGFCPQIHSIVRRNGTDIQLNNCTRVTNTSC 117

Query:   121 YGIDQENAKKYRCI-ADECKNLTGTFNCTQGTCINITDAFECDFRETDSPLKCSGRRGKI 179
               ID     K+ C     C N+ G FNC+ G C N+++ F C  +     +       K+
Sbjct:   118 AMIDLSRLNKFNCNNGTACNNIRGVFNCSNGHCKNMSEFFLCHHKADGLTVNSQKDNTKL 177

Query:   180 NCIAMHGLQNCVRGTCERIRTPYNCDRRCVDIPTRNKNVIVLSGDRVYLSQCQKAVLLNN 239
             N     G   C    C +I+ P++CDR C  I T N N +++  D +  + C+ AV  N 
Sbjct:   178 N-----GFFECHGVHCTKIKKPFSCDRYCSKITTTNVNTLIMHEDNLIAADCENAVAFNQ 232

Query:   240 ---TEQ-------EIWTEDQNNILMASCFNVNNTSRG-IEALDCINGSVLDRSAL-TDLT 287
                +E        E W ED  N+L  +C  V   S   I A DCING++L+   L     
Sbjct:   233 ARGSEHGVRIEPFEFWKEDDGNLL-TNCATVTRESDNRITATDCINGTLLEHDTLPAPFM 291

Query:   288 NFTFLNYLNIY-NAT-ILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLRE 345
             NFT   +  IY N+T  +D +++  P + +L + +  +L INLEGCVNTLR ECK+F+  
Sbjct:   292 NFT--QFWAIYENSTRSVDPEQRYLPNQANLTIYSWKKLFINLEGCVNTLRGECKDFVAR 349

Query:   346 FGKDGTDHNARARFPCFYS-EKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLIL 404
             +G DG ++ A++R+ C+Y+ +     V+AR++L + YRE ++   VP +L ++S ++L +
Sbjct:   350 YGNDGDNNTAQSRYQCYYNKDSNVEFVVARYDLDKVYRELLVSLIVPIVLFVISSISLCI 409

Query:   405 CQRTVEVGDDAKMR 418
               ++V+VGDDAKMR
Sbjct:   410 ITKSVKVGDDAKMR 423

GO:0017080 "sodium channel regulator activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISM

GO:0002028 "regulation of sodium ion transport" evidence=ISS

FB|FBgn0037766 Teh1 "tipE homolog 1" [Drosophila melanogaster (taxid:7227)]

 Score = 115 (45.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
 Identities = 30/106 (28%), Positives = 50/106 (47%)

Query:   299 NATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECKEFLREFGKDGTDHNARAR 358
             N TI +     +    D+  + E+ LL+N++GC       CK F   +G +G      A 
Sbjct:   129 NITIPENMTDYSNFTSDMEQSGEATLLVNIKGCGYPPSVTCKNFNGYYGIEG------AI 182

Query:   359 FPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVSCLTLIL 404
             FPCFYS K    V+  +N  +     +  F VP ++ ++S + L +
Sbjct:   183 FPCFYSRKNKTVVLTSYNHDDQVAMIIHFFAVPFVITVISSIALCI 228

GO:0016021 "integral to membrane" evidence=ISM

GO:0002028 "regulation of sodium ion transport" evidence=IDA

GO:0017080 "sodium channel regulator activity" evidence=IDA

FB|FBgn0035505 Teh2 "tipE homolog 2" [Drosophila melanogaster (taxid:7227)]

 Score = 110 (43.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 33/118 (27%), Positives = 50/118 (42%)

Query:   281 SALTDLTNFTFLNYLNIYNATILDKDRQIAPPEQDLLLANESRLLINLEGCVNTLRDECK 340
             S+LT      F+NY  I  +      R +     D+   + ++ LIN EGC       C 
Sbjct:   154 SSLTKCHQL-FVNYTRIPFSEWERNPRDLDTVNWDV---SYTKFLINSEGCGYPPTTNCS 209

Query:   341 EFLREFGKDGTDHNARARFPCFYSEKIPGTVIARFNLSETYREFMIGFFVPCILLIVS 398
              F R++G     H     FPCFYS   P  VI R++        ++   +P +L  +S
Sbjct:   210 IFARQYG---FSHIGEP-FPCFYSRAYPEVVIGRYSWENNLYHLILSLIIPNVLFAIS 263

GO:0016021 "integral to membrane" evidence=ISM

GO:0017080 "sodium channel regulator activity" evidence=IDA

GO:0002028 "regulation of sodium ion transport" evidence=IDA

FB|FBgn0003710 tipE "temperature-induced paralytic E" [Drosophila melanogaster (taxid:7227)]

 Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 29/104 (27%), Positives = 46/104 (44%)

Query:    30 MTAVLSTVALVYLTVAIYMPYMRAVQSGIDTSPVMCTTTRAVII---ETCTWGSCGEWCL 86
             +    S  A ++L   +  P    +    +  P +C T    I    + C+W SC E C 
Sbjct:    24 LLGTFSLFAFLFLVPFVIEPAFTTIFMQFEEVPALCETYDTEIYYGAKNCSWSSCREGC- 82

Query:    87 SKTSGACAQIYVSLRHNGSNLLFVNCTNSANKTCYGIDQENAKK 130
             +K    C QI V+ R N    L+ N T+  N T Y I+ + A++
Sbjct:    83 TKDIYTCTQIRVNYRLN----LY-NFTDEFNFTEYHINLKEAER 121

GO:0017080 "sodium channel regulator activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS;IDA

GO:0034605 "cellular response to heat" evidence=IDA

GO:0002028 "regulation of sodium ion transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS

GO:0045433 "male courtship behavior, veined wing generated song production" evidence=IMP

GO:0005248 "voltage-gated sodium channel activity" evidence=ISS;TAS

GO:0006814 "sodium ion transport" evidence=NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	454
PF03185	201	CaKB: Calcium-activated potassium channel, beta su	96.96
PF03185	201	CaKB: Calcium-activated potassium channel, beta su	87.79

>PF03185 CaKB: Calcium-activated potassium channel, beta subunit; InterPro: IPR003930 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=96.96  E-value=0.00019  Score=68.32  Aligned_cols=80  Identities=29%  Similarity=0.546  Sum_probs=0.0

Q ss_pred             eeEeeccEEEEeccCCcCCCh---------hhHHHHHHHhcCC-CCCCCCCccceeeeeCCCC-ceEEEeechhhhHHhh
Q psy5732         316 LLLANESRLLINLEGCVNTLR---------DECKEFLREFGKD-GTDHNARARFPCFYSEKIP-GTVIARFNLSETYREF  384 (454)
Q Consensus       316 Lti~nearLlINleGCGYpp~---------veCk~F~~~YG~d-G~d~na~arFPCYYSr~~p-~~VVaryd~~~t~~~l  384 (454)
                      +..+||..+..|-| |-|.|.         .+=.+|.+.||.. |      ..|||||+..++ +-||-+-..  +...+
T Consensus        97 ~L~~~E~~l~~n~k-CsY~P~C~~d~~~~~~~V~~~~~~~~~~~g------q~f~Cfy~P~~~~~~Vil~r~y--~~~~~  167 (201)
T PF03185_consen   97 LLHHDEETLDSNPK-CSYIPKCHRDRQDNRAEVEDFQENFGQQNG------QTFPCFYDPDNQPEDVILRRKY--DPSVL  167 (201)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEEEchHhhccCCc-ceecCcccccHHHHHHHHHHHHHHhhhccC------cceeeeecCCCCcceEEEEEec--CHhHH
Confidence            44556666667777 999872         2234688888887 5      899999999974 566644333  23468


Q ss_pred             hheeecchhhHHHHHhheee
Q psy5732         385 MIGFFVPCILLIVSCLTLIL  404 (454)
Q Consensus       385 i~a~~VP~vlFviS~i~L~~  404 (454)
                      +++|.-|.++|+.+++...+
T Consensus       168 fhslfWP~l~lvgG~liv~m  187 (201)
T PF03185_consen  168 FHSLFWPSLMLVGGVLIVAM  187 (201)
T ss_dssp             --------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876554433

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Ca2+-activated K+ channels are a diverse group of channels that are activated by an increase in intracellular Ca2+ concentration. They are found in the majority of nerve cells, where they modulate cell excitability and action potential. Three types of Ca2+-activated K+ channel have been characterised, termed small-conductance (SK), intermediate conductance (IK) and large conductance (BK) respectively []. BK channels (also referred to as maxi-K channels) are widely expressed in the body, being found in glandular tissue, smooth and skeletal muscle, as well as in neural tissues. They have been demonstrated to regulate arteriolar and airway diameter, and also neurotransmitter release. Each channel complex is thought to be composed of 2 types of subunit: the pore- forming (alpha) subunits and smaller accessory (beta) subunits. The beta subunit (which is thought to possess 2 TM domains) increases the Ca2+ sensitivity of the BK channel []. It does this by enhancing the time spent by the channel in burst-like open states. However, it has little effect on the durations of closed intervals between bursts, or on the numbers of open and closed states entered during gating []. ; GO: 0015269 calcium-activated potassium channel activity, 0006813 potassium ion transport, 0016020 membrane; PDB: 1JO6_A.

>PF03185 CaKB: Calcium-activated potassium channel, beta subunit; InterPro: IPR003930 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=87.79  E-value=0.16  Score=48.78  Aligned_cols=85  Identities=22%  Similarity=0.532  Sum_probs=0.5

Q ss_pred             CCCCcceeeeEeeehhhHHHHhhheeee-eeeEeechhhhhhcCcccCCceeEeecccccccCcccc----ccCCcccCC
Q psy5732          15 PPQDQKICGTICICQMTAVLSTVALVYL-TVAIYMPYMRAVQSGIDTSPVMCTTTRAVIIETCTWGS----CGEWCLSKT   89 (454)
Q Consensus        15 P~Qd~rICg~IC~cQlt~v~S~va~vyL-tvaiy~Ps~~a~~~~~~e~PvmC~T~~~~~~~nC~W~S----C~EwClsk~   89 (454)
                      .-+|+.|+=.     ++++.++|..+|+ ...+.-|++....    .++.-||+..+.-.+.  |-+    ||--|-...
T Consensus        10 ~gedrai~lg-----~~m~~~svlm~~vlGitiv~P~l~s~~----~~et~Ctvl~s~i~~~--~v~Cs~~cg~~c~~~s   78 (201)
T PF03185_consen   10 AGEDRAILLG-----FAMMICSVLMLFVLGITIVKPYLKSLW----FEETNCTVLSSHIVGE--WVDCSFSCGSDCRGVS   78 (201)
T ss_dssp             -S------------------------------------------------------------------------------
T ss_pred             ccchHHHHHH-----HHHHHHHHHHHHHHHHhccchhhhhcc----cccceEEEEEEEeecc--cccccccCCCCCCCcC
Confidence            4567777644     3444444444444 3333338775433    5788999999964433  664    455554456


Q ss_pred             CccccEEEEEEeecCceeeEe
Q psy5732          90 SGACAQIYVSLRHNGSNLLFV  110 (454)
Q Consensus        90 sg~C~qI~v~~r~NGs~l~l~  110 (454)
                      .|.|-||+|++-..|..-+|+
T Consensus        79 ~yPCLqV~Vn~t~sg~~a~L~   99 (201)
T PF03185_consen   79 KYPCLQVFVNYTHSGQTALLH   99 (201)
T ss_dssp             ---------------------
T ss_pred             CCCceEEEEEecCCCceEEEE
Confidence            789999999998877766665

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Ca2+-activated K+ channels are a diverse group of channels that are activated by an increase in intracellular Ca2+ concentration. They are found in the majority of nerve cells, where they modulate cell excitability and action potential. Three types of Ca2+-activated K+ channel have been characterised, termed small-conductance (SK), intermediate conductance (IK) and large conductance (BK) respectively []. BK channels (also referred to as maxi-K channels) are widely expressed in the body, being found in glandular tissue, smooth and skeletal muscle, as well as in neural tissues. They have been demonstrated to regulate arteriolar and airway diameter, and also neurotransmitter release. Each channel complex is thought to be composed of 2 types of subunit: the pore- forming (alpha) subunits and smaller accessory (beta) subunits. The beta subunit (which is thought to possess 2 TM domains) increases the Ca2+ sensitivity of the BK channel []. It does this by enhancing the time spent by the channel in burst-like open states. However, it has little effect on the durations of closed intervals between bursts, or on the numbers of open and closed states entered during gating []. ; GO: 0015269 calcium-activated potassium channel activity, 0006813 potassium ion transport, 0016020 membrane; PDB: 1JO6_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00