Psyllid ID: psy5794


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV
cHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHccc
cHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHcccccHHHHHHHHHHHHcccccccccccccccccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccc
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFvipgeeannldlspdsgindlqnlspeeQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV
veeeintlkhvlasktktaqdlKKKLGFTVWKEFNDDLTQSiknvketqvrdIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLtqsiknvketqv
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV
********************DLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPG******************************************INTLKHVLASKTKTAQDLKKKLGFTVWKEFNDD*************
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVR*IHIV*****************************************QELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSI*NV*****
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLS***********TQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV
VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPGE*****************N*SPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNV*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query152 2.2.26 [Sep-21-2011]
P55326195 Uncharacterized protein F yes N/A 0.342 0.266 0.480 1e-06
Q96J77140 Tumor protein D55 OS=Homo no N/A 0.401 0.435 0.369 0.0006
>sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1 OS=Caenorhabditis elegans GN=F13E6.1 PE=3 SV=2 Back     alignment and function desciption
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query: 99  ELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
           EL + EEEI+TLK VL+++ K A +LK+KLG T + E + D+ +S+K V +T
Sbjct: 67  ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDT 118





Caenorhabditis elegans (taxid: 6239)
>sp|Q96J77|TPD55_HUMAN Tumor protein D55 OS=Homo sapiens GN=TPD52L3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query152
121543927211 hypothetical protein [Maconellicoccus hi 0.625 0.450 0.583 8e-25
307211897 364 Tumor protein D54 [Harpegnathos saltator 0.565 0.236 0.616 4e-22
332025983 357 Tumor protein D54 [Acromyrmex echinatior 0.605 0.257 0.577 4e-22
307179237 278 Tumor protein D54 [Camponotus floridanus 0.565 0.309 0.616 6e-22
328782269 368 PREDICTED: hypothetical protein LOC72619 0.532 0.220 0.626 1e-21
383862441 364 PREDICTED: uncharacterized protein LOC10 0.605 0.252 0.546 1e-21
350408584216 PREDICTED: tumor protein D54-like isofor 0.565 0.398 0.569 1e-20
350408586 367 PREDICTED: tumor protein D54-like isofor 0.565 0.234 0.569 2e-20
340719992 367 PREDICTED: hypothetical protein LOC10064 0.565 0.234 0.569 2e-20
195155336 372 GL17776 [Drosophila persimilis] gi|19411 0.480 0.196 0.643 8e-20
>gi|121543927|gb|ABM55628.1| hypothetical protein [Maconellicoccus hirsutus] Back     alignment and taxonomy information
 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 58  LRFVIPGEEANNLDL-SPDSGINDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLAS 116
           +  +  GE++    L SPDSGIN+LQ LSPEEQEKQ+  W QEL  +E EI+TL+HVL S
Sbjct: 1   MSVISSGEDSIGESLQSPDSGINELQGLSPEEQEKQREAWQQELTNIENEIHTLRHVLTS 60

Query: 117 KTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 152
           KT+TA +LK+KLG +VW+E  DD++Q IKNVKE+ V
Sbjct: 61  KTRTAHELKRKLGISVWREIQDDMSQGIKNVKESNV 96




Source: Maconellicoccus hirsutus

Species: Maconellicoccus hirsutus

Genus: Maconellicoccus

Family: Pseudococcidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211897|gb|EFN87824.1| Tumor protein D54 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332025983|gb|EGI66136.1| Tumor protein D54 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307179237|gb|EFN67633.1| Tumor protein D54 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|328782269|ref|XP_001121953.2| PREDICTED: hypothetical protein LOC726199 [Apis mellifera] gi|380029249|ref|XP_003698291.1| PREDICTED: uncharacterized protein LOC100870637 [Apis florea] Back     alignment and taxonomy information
>gi|383862441|ref|XP_003706692.1| PREDICTED: uncharacterized protein LOC100878467 [Megachile rotundata] Back     alignment and taxonomy information
>gi|350408584|ref|XP_003488451.1| PREDICTED: tumor protein D54-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|350408586|ref|XP_003488452.1| PREDICTED: tumor protein D54-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340719992|ref|XP_003398428.1| PREDICTED: hypothetical protein LOC100644898 [Bombus terrestris] Back     alignment and taxonomy information
>gi|195155336|ref|XP_002018561.1| GL17776 [Drosophila persimilis] gi|194114357|gb|EDW36400.1| GL17776 [Drosophila persimilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query152
WB|WBGene00008745195 F13E6.1 [Caenorhabditis elegan 0.342 0.266 0.480 2e-08
RGD|1306767226 Tpd52 "tumor protein D52" [Rat 0.578 0.389 0.368 3.1e-08
UNIPROTKB|Q5ZHP4184 TPD52 "Uncharacterized protein 0.427 0.353 0.434 4.2e-08
MGI|MGI:107749224 Tpd52 "tumor protein D52" [Mus 0.578 0.392 0.368 5.2e-08
UNIPROTKB|F1NDS1239 TPD52 "Uncharacterized protein 0.585 0.372 0.354 6.7e-08
UNIPROTKB|P55327224 TPD52 "Tumor protein D52" [Hom 0.453 0.308 0.410 1.5e-07
UNIPROTKB|Q95212184 TPD52 "Tumor protein D52" [Ory 0.453 0.375 0.397 1.8e-07
UNIPROTKB|F1RX99184 TPD52 "Uncharacterized protein 0.526 0.434 0.341 2.9e-07
UNIPROTKB|Q9I8F4 210 TPD52L1 "Tumor protein D53 hom 0.552 0.4 0.317 5.9e-07
UNIPROTKB|E1BE76 247 TPD52 "Uncharacterized protein 0.526 0.323 0.341 6e-07
WB|WBGene00008745 F13E6.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query:    99 ELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
             EL + EEEI+TLK VL+++ K A +LK+KLG T + E + D+ +S+K V +T
Sbjct:    67 ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDT 118


GO:0019915 "lipid storage" evidence=IMP
RGD|1306767 Tpd52 "tumor protein D52" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZHP4 TPD52 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:107749 Tpd52 "tumor protein D52" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDS1 TPD52 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P55327 TPD52 "Tumor protein D52" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q95212 TPD52 "Tumor protein D52" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms
UNIPROTKB|F1RX99 TPD52 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9I8F4 TPD52L1 "Tumor protein D53 homolog" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BE76 TPD52 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query152
pfam04201162 pfam04201, TPD52, Tumour protein D52 family 9e-09
pfam04201162 pfam04201, TPD52, Tumour protein D52 family 2e-05
>gnl|CDD|217962 pfam04201, TPD52, Tumour protein D52 family Back     alignment and domain information
 Score = 51.1 bits (122), Expect = 9e-09
 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 84  LSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQS 143
           LS  E+E+ + E    LA++EEEI+TL+ VLA+K K   +LK+KLG T   E   ++++S
Sbjct: 26  LSEAEKEELRTE----LAKLEEEISTLRQVLAAKEKHLAELKRKLGLTPLSELKQNISKS 81

Query: 144 IKNVKET 150
             +V  T
Sbjct: 82  WHDVTAT 88


The hD52 gene was originally identified through its elevated expression level in human breast carcinoma. Cloning of D52 homologues from other species has indicated that D52 may play roles in calcium-mediated signal transduction and cell proliferation. Two human homologues of hD52, hD53 and hD54, have also been identified, demonstrating the existence of a novel gene/protein family. These proteins have an amino terminal coiled-coil that allows members to form homo- and heterodimers with each other. Length = 162

>gnl|CDD|217962 pfam04201, TPD52, Tumour protein D52 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 152
PF04201162 TPD52: Tumour protein D52 family; InterPro: IPR007 99.96
KOG4010|consensus 208 99.95
KOG4010|consensus208 99.94
PF04201162 TPD52: Tumour protein D52 family; InterPro: IPR007 99.91
PF1438988 Lzipper-MIP1: Leucine-zipper of ternary complex fa 81.89
>PF04201 TPD52: Tumour protein D52 family; InterPro: IPR007327 The hD52 gene was originally identified through its elevated expression level in human breast carcinoma Back     alignment and domain information
Probab=99.96  E-value=2.2e-30  Score=206.75  Aligned_cols=82  Identities=37%  Similarity=0.539  Sum_probs=74.2

Q ss_pred             ccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHhhhCccchHHhhHHH
Q psy5794          61 VIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDL  140 (152)
Q Consensus        61 v~~geda~~~~~s~~~~~~~~~~LseEE~e~~~eelr~EL~kvEeEI~TLrqvLaaKe~~~~elKrkLGit~~~elkqn~  140 (152)
                      +++|+|++++..      +.+++|||||+    +|||.||+|||+||+||||||+||++||+|||||||||||++|||||
T Consensus         9 ~e~~~~~~~~~~------~~~~~LsEeE~----eeLr~EL~KvEeEI~TLrqvL~aKer~~~eLKrkLGit~l~elkqnl   78 (162)
T PF04201_consen    9 TEEGEDTAASIS------ASEEGLSEEER----EELRSELAKVEEEIQTLRQVLAAKERHCAELKRKLGITPLSELKQNL   78 (162)
T ss_pred             CCCCcchhhhcc------CCcccCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCchHHHHHHHH
Confidence            478888876432      34589999998    59999999999999999999999999999999999999999999999


Q ss_pred             hhchhhhhhcCC
Q psy5794         141 TQSIKNVKETQV  152 (152)
Q Consensus       141 skg~~~vq~s~~  152 (152)
                      ++||||||+|++
T Consensus        79 skg~~~vq~S~a   90 (162)
T PF04201_consen   79 SKGWHDVQDSNA   90 (162)
T ss_pred             HHHhHhhhchhH
Confidence            999999999985



Cloning of D52 homologues from other species has indicated that D52 may play roles in calcium-mediated signal transduction and cell proliferation. Two human homologues of hD52, hD53 and hD54, have also been identified, demonstrating the existence of a novel gene/protein family []. These proteins have an N-terminal coiled-coil that allows members to form homo- and heterodimers with each other [].

>KOG4010|consensus Back     alignment and domain information
>KOG4010|consensus Back     alignment and domain information
>PF04201 TPD52: Tumour protein D52 family; InterPro: IPR007327 The hD52 gene was originally identified through its elevated expression level in human breast carcinoma Back     alignment and domain information
>PF14389 Lzipper-MIP1: Leucine-zipper of ternary complex factor MIP1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00