Psyllid ID: psy5933

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
MRVNISYLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRESHDINEPESIVSHHGQSVYAD
ccEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccEEcHHHHHHHHHccccEEEEEEccccccccccccccccccccccEEEcccccccccccccccccccccHHHHHHHccccccccccccccHHHHHHHHcccEEEEccccEEEEEEcccccccccHHHHHHHHcccccccccccccccccEEEEEEEEcccEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccccccHHcccccccccc
cEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccccccccccccccHHHcccccccccccccccccccccccccccccEEEEcccHHHHHHHccccEHHHEEcccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHccEEEEEEEEEcccccccHHHHHHHHHHHHHccccccEEEEEcccEEEcEcccccccccccEEcccEEHHHccccccccccccEEEEEHHHHHHcccccccccccccHHHHHHHHHHcccEEEcccccEEEEEEEEcccccccHHHHHHHHHHHHHHcHcccccEEEEEEEEEEEccccEEEEEEEccccccccccccccccHHHEccccccccccccccccccccccccHHHEcccccEEEcc
mrvnisylplhsdyqrktyyCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDnienhlepiqiktvnthtplcsifeKHSKMfnknfvfndtALNILHTrlninkggaweptdcipqhqVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIeqrhpaefnrgkllnigyiealkikpfhcfifhdvdlmptnpnniyactkqprhmsvaidtfnyelpyctIFGGAIAMLQHQFRqvngfsnlyfgwgaeddDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEklengpfrfktdglnTLQNNYTVLageangcvtqykdnssidscsfdlqvphSALQMINVVIDAAADHLdyrwreshdinepesivshhgqsvyad
mrvnisylplhsdyqrKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLengpfrfktdglNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWREShdinepesivshhgqsvyad
MRVNISYLPLHSDYQRKTYYCLHKLRYLVRRKGllivlvlvtlwlllvRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAketeklerlekleNGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRESHDINEPESIVSHHGQSVYAD
****ISYLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRE*********************
******YLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHL************************************************GAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRE*********************
MRVNISYLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRESHDINEPESIVSHHGQSVYAD
MRVNISYLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTF********************HTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSAL*****VIDAAADHLDYRWRESHDINEPESIVSHH***VYA*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRVNISYLPLHSDYQRKTYYCLHKLRYLVRRKGLLIVLVLVTLWLLLVRYYNFILTILYCVTFIQVDNIENHLEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLSNYYSICRFSKQVSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRESHDINEPESIVSHHGQSVYAD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query406 2.2.26 [Sep-21-2011]
A8Y1P7384 Beta-1,4-N-acetylgalactos N/A N/A 0.630 0.666 0.415 3e-54
Q9GUM2383 Beta-1,4-N-acetylgalactos yes N/A 0.522 0.553 0.453 4e-53
P15535399 Beta-1,4-galactosyltransf yes N/A 0.529 0.538 0.443 8e-49
P15291398 Beta-1,4-galactosyltransf yes N/A 0.532 0.542 0.441 8e-49
P08037402 Beta-1,4-galactosyltransf yes N/A 0.529 0.534 0.429 9e-49
Q80WN9369 Beta-1,4-galactosyltransf no N/A 0.522 0.574 0.415 2e-47
Q9Z2Y2369 Beta-1,4-galactosyltransf no N/A 0.522 0.574 0.406 9e-47
Q80WN7344 Beta-1,4-galactosyltransf no N/A 0.544 0.642 0.422 2e-46
O60909372 Beta-1,4-galactosyltransf no N/A 0.522 0.569 0.406 4e-46
Q9JJ04344 Beta-1,4-galactosyltransf no N/A 0.532 0.627 0.423 2e-45
>sp|A8Y1P7|BRE4_CAEBR Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis briggsae GN=bre-4 PE=3 SV=1 Back     alignment and function desciption
 Score =  213 bits (541), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 151/260 (58%), Gaps = 4/260 (1%)

Query: 73  LEPIQIKTVNTHTPLCSIFEKHSKMFNKNFVFNDTALNILHTRLNINKGGAWEPTDCIPQ 132
           + PI     N   P C+    H     + F+       +       + GG   PT+C+ +
Sbjct: 89  IRPILFGDANETRPHCNQTPPHLVGPIRVFLDEPDFATLEKIYPETHPGGHGIPTECVAR 148

Query: 133 HQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEA 192
           H+VAIIVPY +RE  L+  L ++H  L KQ + Y IFV+EQ     FNRGKL+N+GY  A
Sbjct: 149 HRVAIIVPYRDREAHLRIMLHNLHSLLAKQQLDYAIFVVEQVANQTFNRGKLMNVGYDVA 208

Query: 193 LKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQH 252
            ++ P+ CFIFHDVDL+P +  N+Y C  QPRHMSVAID F+Y+LPY  IFGG  A+ Q 
Sbjct: 209 SRLYPWQCFIFHDVDLLPEDDRNLYTCPIQPRHMSVAIDKFHYKLPYSAIFGGISALTQE 268

Query: 253 QFRQVNGFSNLYFGWGAEDDDLFQRLSNY-YSICRFSKQVSEYVMLNHAKETEKLE---R 308
             + +NGFSN ++GWG EDDDL  R S     + R+  Q++ Y M+ H+ E        R
Sbjct: 269 HVKAINGFSNDFWGWGGEDDDLATRTSQAGLKVSRYPAQIARYKMIKHSTEATNPVNKCR 328

Query: 309 LEKLENGPFRFKTDGLNTLQ 328
            + +     R+KTDGL++L+
Sbjct: 329 YKIMGQTKRRWKTDGLSSLK 348
Catalyzes the transfer of galactose onto proteins or lipids. Required for susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2 and bre-3.
Caenorhabditis briggsae (taxid: 6238)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9GUM2|BRE4_CAEEL Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis elegans GN=bre-4 PE=1 SV=1 Back     alignment and function description
>sp|P15535|B4GT1_MOUSE Beta-1,4-galactosyltransferase 1 OS=Mus musculus GN=B4galt1 PE=2 SV=1 Back     alignment and function description
>sp|P15291|B4GT1_HUMAN Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1 SV=5 Back     alignment and function description
>sp|P08037|B4GT1_BOVIN Beta-1,4-galactosyltransferase 1 OS=Bos taurus GN=B4GALT1 PE=1 SV=3 Back     alignment and function description
>sp|Q80WN9|B4GT2_CRIGR Beta-1,4-galactosyltransferase 2 OS=Cricetulus griseus GN=B4GALT2 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z2Y2|B4GT2_MOUSE Beta-1,4-galactosyltransferase 2 OS=Mus musculus GN=B4galt2 PE=2 SV=1 Back     alignment and function description
>sp|Q80WN7|B4GT4_CRIGR Beta-1,4-galactosyltransferase 4 OS=Cricetulus griseus GN=B4GALT4 PE=2 SV=1 Back     alignment and function description
>sp|O60909|B4GT2_HUMAN Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9JJ04|B4GT4_MOUSE Beta-1,4-galactosyltransferase 4 OS=Mus musculus GN=B4galt4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query406
156542995330 PREDICTED: beta-1,4-N-acetylgalactosamin 0.544 0.669 0.566 1e-70
253795474329 beta-1,4-galactosyltransferase-like [Acy 0.741 0.914 0.469 3e-69
307176238330 Beta-1,4-N-acetylgalactosaminyltransfera 0.674 0.830 0.465 9e-68
322803070327 hypothetical protein SINV_03838 [Solenop 0.726 0.902 0.450 2e-67
307207089330 Beta-1,4-N-acetylgalactosaminyltransfera 0.716 0.881 0.447 2e-67
110749779329 PREDICTED: beta-1,4-N-acetylgalactosamin 0.672 0.829 0.462 3e-67
380027086329 PREDICTED: beta-1,4-N-acetylgalactosamin 0.672 0.829 0.462 8e-67
383864799330 PREDICTED: beta-1,4-N-acetylgalactosamin 0.726 0.893 0.431 1e-66
242011477313 conserved hypothetical protein [Pediculu 0.709 0.920 0.471 2e-66
332023597303 Beta-1,4-N-acetylgalactosaminyltransfera 0.546 0.732 0.537 2e-66
>gi|156542995|ref|XP_001603169.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 127/224 (56%), Positives = 158/224 (70%), Gaps = 3/224 (1%)

Query: 112 LHTRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVI 171
           L  RL +  GG W+PT+C P + VAII+PY NR+ QL TF+ +IH FLQ Q + Y+IFVI
Sbjct: 94  LARRLGVLPGGQWKPTNCQPVYNVAIILPYRNRQSQLNTFMNYIHPFLQSQNLDYRIFVI 153

Query: 172 EQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAID 231
           EQ    EFNR KL NIG++EA KI  FHCFIF D+DL+P NPNNIYACTK PRHMS +++
Sbjct: 154 EQSSTKEFNRAKLFNIGFVEATKISDFHCFIFQDIDLIPQNPNNIYACTKMPRHMSSSVN 213

Query: 232 TFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQ 290
           TF Y LPY  +FGGAIA+ + QF +VNGFSN++FGWG EDDD + RL S  + + RF   
Sbjct: 214 TFRYNLPYTGLFGGAIALTRQQFEKVNGFSNVFFGWGGEDDDFYSRLQSRGFPVTRFGPD 273

Query: 291 VSEYVMLNHAKETEKLERLEKLENGPFRFKTDGLNTLQNNYTVL 334
           V++Y ML H KE     R   LENG  RF TDG++ L+  Y VL
Sbjct: 274 VAQYYMLKHKKEPPSSARFTNLENGAKRFDTDGISDLE--YEVL 315

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|253795474|ref|NP_001156727.1| beta-1,4-galactosyltransferase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307176238|gb|EFN65873.1| Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322803070|gb|EFZ23158.1| hypothetical protein SINV_03838 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307207089|gb|EFN84898.1| Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|110749779|ref|XP_624523.2| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4 isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|380027086|ref|XP_003697264.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 1 [Apis florea] gi|380027088|ref|XP_003697265.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 2 [Apis florea] Back     alignment and taxonomy information
>gi|383864799|ref|XP_003707865.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|242011477|ref|XP_002426475.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510601|gb|EEB13737.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|332023597|gb|EGI63830.1| Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query406
FB|FBgn0027538403 beta4GalNAcTA "beta4GalNAcTA" 0.554 0.558 0.458 5.5e-54
WB|WBGene00000269383 bre-4 [Caenorhabditis elegans 0.443 0.469 0.502 2.9e-48
UNIPROTKB|Q9GUM2383 bre-4 "Beta-1,4-N-acetylgalact 0.443 0.469 0.502 2.9e-48
FB|FBgn0039625323 beta4GalNAcTB "beta4GalNAcTB" 0.672 0.845 0.395 9.8e-48
ZFIN|ZDB-GENE-041114-103353 b4galt4 "UDP-Gal:betaGlcNAc be 0.438 0.504 0.491 1.6e-47
UNIPROTKB|F1SE74401 B4GALT1 "Uncharacterized prote 0.529 0.536 0.434 1.3e-45
ZFIN|ZDB-GENE-050417-236364 b4galt1 "UDP-Gal:betaGlcNAc be 0.450 0.502 0.472 1.6e-45
UNIPROTKB|F1PGZ1258 B4GALT1 "Uncharacterized prote 0.554 0.872 0.432 2.1e-45
UNIPROTKB|P08037402 B4GALT1 "Beta-1,4-galactosyltr 0.450 0.455 0.467 5.6e-45
UNIPROTKB|P15291398 B4GALT1 "Beta-1,4-galactosyltr 0.453 0.462 0.481 5.6e-45
FB|FBgn0027538 beta4GalNAcTA "beta4GalNAcTA" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 106/231 (45%), Positives = 151/231 (65%)

Query:   108 ALNILHTRLN--INKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFIS 165
             +L+++   L   +  GGA+EP +C  QH VAI+VP+ +R   L  FL +IH FL KQ I+
Sbjct:   154 SLDVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIA 213

Query:   166 YQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRH 225
             Y+IF++EQ +   FNR  ++NIGY+EALK+  + CFIFHDVDL+P +  N+Y C +QPRH
Sbjct:   214 YRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQPRH 273

Query:   226 MSVAIDTFNYELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL--SNYYS 283
             MSVAIDT N+ LPY +IFGG  AM +  F+ VNGFSN +FGWG EDDD+  RL  +N + 
Sbjct:   274 MSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLF- 332

Query:   284 ICRFSKQVSEYVMLNHAXXXXXXXXXXXXXNGPFRFKTDGLNTLQNN-YTV 333
             I R+   ++ Y ML H              NG  + + DG+N+++ + Y++
Sbjct:   333 ISRYPVNIARYKMLKHQKEKANPKRYENLQNGMSKIEQDGINSIKYSIYSI 383
GO:0007291 "sperm individualization" evidence=IMP
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0008376 "acetylgalactosaminyltransferase activity" evidence=IDA
GO:0008344 "adult locomotory behavior" evidence=IMP
GO:0006044 "N-acetylglucosamine metabolic process" evidence=IDA
GO:0007528 "neuromuscular junction development" evidence=IMP
GO:0033842 "N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity" evidence=IDA
GO:0009247 "glycolipid biosynthetic process" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
WB|WBGene00000269 bre-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GUM2 bre-4 "Beta-1,4-N-acetylgalactosaminyltransferase bre-4" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0039625 beta4GalNAcTB "beta4GalNAcTB" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-103 b4galt4 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SE74 B4GALT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-236 b4galt1 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGZ1 B4GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P08037 B4GALT1 "Beta-1,4-galactosyltransferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P15291 B4GALT1 "Beta-1,4-galactosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
3rd Layer2.4.1.133LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query406
cd00899219 cd00899, b4GalT, Beta-4-Galactosyltransferase is i 3e-82
pfam13733136 pfam13733, Glyco_transf_7N, N-terminal region of g 2e-38
pfam0270978 pfam02709, Glyco_transf_7C, N-terminal domain of g 8e-25
pfam10111278 pfam10111, Glyco_tranf_2_2, Glycosyltransferase li 9e-04
>gnl|CDD|132999 cd00899, b4GalT, Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information 
 Score =  250 bits (642), Expect = 3e-82
 Identities = 104/206 (50%), Positives = 135/206 (65%), Gaps = 6/206 (2%)

Query: 133 HQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEA 192
           H+VAIIVP+ NR   L  FL H+H FLQ+Q + Y+IFVIEQ     FNR KLLN+G++EA
Sbjct: 2   HKVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQVGNFRFNRAKLLNVGFLEA 61

Query: 193 LKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFGGAIAMLQH 252
           LK   + CFIFHDVDL+P N  N+Y C + PRH+SV +D F+Y+LPY T FGG +A+ + 
Sbjct: 62  LKDGDWDCFIFHDVDLLPENDRNLYGCEEGPRHLSVPLDKFHYKLPYKTYFGGVLALTRE 121

Query: 253 QFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEYVMLNH---AKETEKLER 308
           QFR+VNGFSN Y+GWG EDDDL+ R+ +    I R S     Y M+ H    +  +   R
Sbjct: 122 QFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNR 181

Query: 309 LEKLENGPFRFKTDGLNTLQNNYTVL 334
              L+N   R  +DGLN+L   Y VL
Sbjct: 182 FALLQNSRERDHSDGLNSL--KYKVL 205

Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. Length = 219
>gnl|CDD|222351 pfam13733, Glyco_transf_7N, N-terminal region of glycosyl transferase group 7 Back     alignment and domain information
>gnl|CDD|217196 pfam02709, Glyco_transf_7C, N-terminal domain of galactosyltransferase Back     alignment and domain information
>gnl|CDD|220577 pfam10111, Glyco_tranf_2_2, Glycosyltransferase like family 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 406
KOG3916|consensus372 100.0
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 100.0
PF13733136 Glyco_transf_7N: N-terminal region of glycosyl tra 100.0
KOG3917|consensus310 100.0
PF0270978 Glyco_transf_7C: N-terminal domain of galactosyltr 99.88
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.78
KOG3588|consensus494 99.76
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.6
PF05679499 CHGN: Chondroitin N-acetylgalactosaminyltransferas 99.6
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.4
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.29
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.28
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.17
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.16
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.15
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.14
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.13
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.05
PRK11204420 N-glycosyltransferase; Provisional 99.02
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.01
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.0
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.0
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.96
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 98.95
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 98.93
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 98.92
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 98.86
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 98.84
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 98.81
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 98.78
PRK10063248 putative glycosyl transferase; Provisional 98.72
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 98.71
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 98.71
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.64
PRK10018279 putative glycosyl transferase; Provisional 98.63
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 98.52
cd06442224 DPM1_like DPM1_like represents putative enzymes si 98.48
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.46
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 98.45
COG1216305 Predicted glycosyltransferases [General function p 98.44
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.38
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 98.37
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.36
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 98.35
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 98.26
COG1215439 Glycosyltransferases, probably involved in cell wa 98.2
PRK10073328 putative glycosyl transferase; Provisional 98.19
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.18
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 98.18
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.04
COG4092346 Predicted glycosyltransferase involved in capsule 98.01
cd06438183 EpsO_like EpsO protein participates in the methano 97.98
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 97.84
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 97.83
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.8
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.61
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 97.54
KOG3736|consensus578 97.53
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.47
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 97.43
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 97.25
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.23
PRK05454 691 glucosyltransferase MdoH; Provisional 97.22
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 96.96
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 96.92
KOG3737|consensus 603 96.12
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 95.98
KOG3738|consensus 559 95.96
KOG2978|consensus238 94.52
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 93.74
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 93.35
PF03214348 RGP: Reversibly glycosylated polypeptide; InterPro 87.7
PLN03180346 reversibly glycosylated polypeptide; Provisional 86.06
>KOG3916|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.4e-100  Score=752.68  Aligned_cols=265  Identities=42%  Similarity=0.760  Sum_probs=257.1

Q ss_pred             CCCCCCCCc-CCCcceeecccCCCChHHHHH-hcCCCCCCCeecCCCCcCCceEEEEEeecCchHHHHHHHHHHHHHHhh
Q psy5933          84 HTPLCSIFE-KHSKMFNKNFVFNDTALNILH-TRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQK  161 (406)
Q Consensus        84 ~~~~Cp~~~-~l~G~~~~~~~~~~~~~~~v~-~~~~~~~GG~~~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~r  161 (406)
                      .++.||+.+ .++||+.++|+.+.. +|.++ +||.|.|||+|+|++|+|++|||||||||+|++||+.||.||||+|||
T Consensus       101 ~l~~Cp~~~p~l~g~~~~~~~~~~~-~e~v~~~~P~v~pGG~~~P~dC~ar~kvAIIIPfR~Re~HL~~~l~~LhP~Lqr  179 (372)
T KOG3916|consen  101 ELPPCPEVSPILVGPILVNFSMPSL-LELVQKENPEVRPGGRYRPEDCQARHKVAIIIPFRNREEHLRYLLHHLHPFLQR  179 (372)
T ss_pred             cCCCCCCCCcccCCccceecccchH-HHHHHhcCCCcCCCCCcCCCCCCccceeEEEeecccHHHHHHHHHHHhhHHHHh
Confidence            488999996 999999999996654 78888 599999999999999999999999999999999999999999999999


Q ss_pred             cccceeEEEEEEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCceeeeeCCCcceeEEecccccccCCccc
Q psy5933         162 QFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCT  241 (406)
Q Consensus       162 Q~l~y~I~VIeQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY~c~~~PrHlS~~~dkf~yrlpy~~  241 (406)
                      |+++|+||||||.++++|||||+||+||.||+|++.|||||||||||+|+||+|+|.|+.+|||+|+++|||+|+|||..
T Consensus       180 QrL~y~iyVieQ~g~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPenDrNlY~C~~~PRH~sva~dk~gy~LPY~~  259 (372)
T KOG3916|consen  180 QRLDYRIYVIEQAGNKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDRNLYGCPEQPRHMSVALDKFGYRLPYKE  259 (372)
T ss_pred             hhhceeEEEEEecCCCcccHHHhhhhHHHHHHHhcCCCEEEEecccccccCCCCccCCCCCCcchhhhhhhccccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecccceeeEEeccC--CCcchhHHHHHHHHcCCce
Q psy5933         242 IFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEYVMLNH--AKETEKLERLEKLENGPFR  318 (406)
Q Consensus       242 ~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~~~grY~ml~H--k~~~~N~~R~~ll~~~~~r  318 (406)
                      +||||+|++++||.+||||||.|||||||||||+.|+ .+|++|+||++++|||+||+|  |+|++|+.|+++|.+++.|
T Consensus       260 ~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~~Ry~lL~~tk~r  339 (372)
T KOG3916|consen  260 YFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNPGRYKLLRNTKER  339 (372)
T ss_pred             hhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCChHHHHHHHhhhhh
Confidence            9999999999999999999999999999999999999 999999999999999999999  7899999999999999999


Q ss_pred             eccCcccccccceEEeEEEEeceeeEEEeCCCC
Q psy5933         319 FKTDGLNTLQNNYTVLAGEANGCVTQYKDNSSI  351 (406)
Q Consensus       319 ~~~DGLnsl~~~Y~vl~~~~~~lyT~i~~~~~~  351 (406)
                      |..||||||  +|++++++.+||||||+||++.
T Consensus       340 ~~~DGLnsl--~Y~~~~v~~~pLyt~itVDl~~  370 (372)
T KOG3916|consen  340 QTQDGLNSL--KYQLLKVELDPLYTNITVDLGP  370 (372)
T ss_pred             hhhccccce--eeeeeeeecccceEEEEEeccc
Confidence            999999999  9999999999999999666654

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A Back     alignment and domain information
>KOG3917|consensus Back     alignment and domain information
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>KOG3588|consensus Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG3736|consensus Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG3737|consensus Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>KOG3738|consensus Back     alignment and domain information
>KOG2978|consensus Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants [] Back     alignment and domain information
>PLN03180 reversibly glycosylated polypeptide; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query406
1nmm_B286 Beta-1,4-Galactosyltransferase Mutant Cys342thr Com 2e-47
1fr8_A288 Crystal Structure Of The Bovine Beta 1,4 Galactosyl 2e-47
1fgx_A288 Crystal Structure Of The Bovine Beta 1,4 Galactosyl 2e-47
1nf5_B286 Crystal Structure Of Lactose Synthase, Complex With 3e-47
1yro_B286 Crystal Structure Of Beta14,-Galactosyltransferase 4e-47
2fyd_B286 Catalytic Domain Of Bovine Beta 1, 4-Galactosyltran 6e-47
1tvy_A286 Beta-1,4-Galactosyltransferase Mutant Met344his (M3 1e-46
2ae7_A287 Crystal Structure Of Human M340h-Beta1,4-Galactosyl 1e-46
1nhe_B286 Crystal Structure Of Lactose Synthase Complex With 2e-46
1pzy_B286 W314a-Beta1,4-Galactosyltransferase-I Complexed Wit 6e-46
3lw6_A287 Crystal Structure Of Drosophila Beta1,4-Galactosylt 4e-19
>pdb|1NMM|B Chain B, Beta-1,4-Galactosyltransferase Mutant Cys342thr Complex With Alpha- Lactalbumin And Glcnac Length = 286 Back     alignment and structure 
Iteration: 1

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/184 (46%), Positives = 122/184 (66%), Gaps = 1/184 (0%)
Query: 118 INKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPA 177
           +  GG + P DCI  H+VAII+P+ NR+  LK +L ++H  LQ+Q + Y I+VI Q   +
Sbjct: 49  VKLGGRYTPMDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGES 108
Query: 178 EFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYEL 237
            FNR KLLN+G+ EALK   ++CF+F DVDL+P N +N Y C  QPRH+SVA+D F + L
Sbjct: 109 MFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFSL 168
Query: 238 PYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRLS-NYYSICRFSKQVSEYVM 296
           PY   FGG  A+ + QF  +NGF N Y+GWG EDDD++ RL+    S+ R +  + +  M
Sbjct: 169 PYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRLAFRGMSVSRPNAVIGKTRM 228
Query: 297 LNHA 300
           + H+
Sbjct: 229 IRHS 232
>pdb|1FR8|A Chain A, Crystal Structure Of The Bovine Beta 1,4 Galactosyltransferase (B4galt1) Catalytic Domain Complexed With Uridine Diphosphogalactose Length = 288 Back     alignment and structure
>pdb|1FGX|A Chain A, Crystal Structure Of The Bovine Beta 1,4 Galactosyltransferase (B4galt1) Catalytic Domain Complexed With Ump Length = 288 Back     alignment and structure
>pdb|1NF5|B Chain B, Crystal Structure Of Lactose Synthase, Complex With Glucose Length = 286 Back     alignment and structure
>pdb|1YRO|B Chain B, Crystal Structure Of Beta14,-Galactosyltransferase Mutant Arg228lys In Complex With Alpha-Lactalbumin In The Presence Of Udp-Galactose And Mn Length = 286 Back     alignment and structure
>pdb|2FYD|B Chain B, Catalytic Domain Of Bovine Beta 1, 4-Galactosyltransferase In Complex With Alpha-Lactalbumin, Glucose, Mn, And Udp-N- Acetylgalactosamine Length = 286 Back     alignment and structure
>pdb|1TVY|A Chain A, Beta-1,4-Galactosyltransferase Mutant Met344his (M344h-Gal- T1) Complex With Udp-Galactose And Manganese Length = 286 Back     alignment and structure
>pdb|2AE7|A Chain A, Crystal Structure Of Human M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1) In Complex With Pentasaccharide Length = 287 Back     alignment and structure
>pdb|1NHE|B Chain B, Crystal Structure Of Lactose Synthase Complex With Udp Length = 286 Back     alignment and structure
>pdb|1PZY|B Chain B, W314a-Beta1,4-Galactosyltransferase-I Complexed With Alpha-Lactalbumin In The Presence Of N-Acetylglucosamine, Udp And Manganese Length = 286 Back     alignment and structure
>pdb|3LW6|A Chain A, Crystal Structure Of Drosophila Beta1,4-Galactosyltransferas Length = 287 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query406
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 2e-58
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 8e-55
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Length = 287 Back     alignment and structure
 Score =  191 bits (486), Expect = 2e-58
 Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 6/222 (2%)

Query: 117 NINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP 176
           N+  GG + P DC+  H+VAII+P+ NR+  LK +L ++H  LQ+Q + Y I+VI Q   
Sbjct: 49  NVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGD 108

Query: 177 AEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYE 236
             FNR KLLN+G+ EALK   + CF+F DVDL+P N +N Y C  QPRH+SVA+D F + 
Sbjct: 109 TIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFS 168

Query: 237 LPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEYV 295
           LPY   FGG  A+ + QF  +NGF N Y+GWG EDDD+F RL     SI R +  V    
Sbjct: 169 LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTR 228

Query: 296 MLNHAKETEK---LERLEKLENGPFRFKTDGLNTLQNNYTVL 334
            + H+++ +     +R +++ +      +DGLN+L   Y VL
Sbjct: 229 HIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL--TYQVL 268
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Length = 287 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query406
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 100.0
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 100.0
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.46
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.41
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.39
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.38
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 99.28
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.26
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.16
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 99.15
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.99
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.5
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 98.5
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.48
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.38
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 97.02
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 95.37
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 94.4
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 89.59
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure
Probab=100.00  E-value=1.8e-77  Score=582.20  Aligned_cols=249  Identities=27%  Similarity=0.488  Sum_probs=200.1

Q ss_pred             CCCcceeecccCCCChHHHHH-hcCCCCCCCeecCCCCcCCceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEE
Q psy5933          93 KHSKMFNKNFVFNDTALNILH-TRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVI  171 (406)
Q Consensus        93 ~l~G~~~~~~~~~~~~~~~v~-~~~~~~~GG~~~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VI  171 (406)
                      .-+||+.|+|+.+++ |++|+ +||.|++||+|+|++|+|+++||||||||||++||+.||+||||||+||+++|.|+||
T Consensus        11 ~~~gp~~~~~~~~~~-l~~v~~~~~~v~~gG~~~P~~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~Vi   89 (287)
T 3lw6_A           11 RGSGPMLIEFNIPVD-LKLVEQQNPKVKLGGRYTPMDGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVL   89 (287)
T ss_dssp             -------------------------------------CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCeEEEcCCCCC-HHHHHHhCCCcccCCEECCCccCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEE
Confidence            457999999999988 99999 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCceeeeeCC--CcceeEEecccccccCCccccccceeee
Q psy5933         172 EQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTK--QPRHMSVAIDTFNYELPYCTIFGGAIAM  249 (406)
Q Consensus       172 eQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY~c~~--~PrHlS~~~dkf~yrlpy~~~fGGv~a~  249 (406)
                      ||.|+.+||||+|||+||.||++  .+||||||||||||++|+|.|.|++  +|+|+|.  ++++|++||..+|||++|+
T Consensus        90 eQ~~~~~FNRa~LlNvGf~ea~~--~~d~~ifHDVDLlP~dd~n~Y~c~~~~~P~Hls~--~~~~~~~~Y~~~~GGv~a~  165 (287)
T 3lw6_A           90 NQVDRFRFNRASLINVGFQFASD--VYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAG--PKLHPKYHYDNFVGGILLV  165 (287)
T ss_dssp             EECSSSCCCHHHHHHHHHHHSCT--TCCEEEEECTTEEECCTTSCCCCCCTTCCEESSC--TTTCSSCCCTTCCCSEEEE
T ss_pred             ecCCCCccchhheecccHHHHhc--cCCEEEEecccccccCCCccccCCCCCCceEEee--ccccCCCCcCCccccEEec
Confidence            99999999999999999999976  6899999999999999999999986  8999986  5789999999999999999


Q ss_pred             cHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEeccc-ceeeEEeccCCC-----cchhHHHHHHHHcCCceeccC
Q psy5933         250 LQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSK-QVSEYVMLNHAK-----ETEKLERLEKLENGPFRFKTD  322 (406)
Q Consensus       250 ~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~-~~grY~ml~Hk~-----~~~N~~R~~ll~~~~~r~~~D  322 (406)
                      +++||.+||||||.|||||+||+||+.|+ .+|+++.|++. .+|||+|+.|.+     ++.+++|++++..+++|+..|
T Consensus       166 ~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~d  245 (287)
T 3lw6_A          166 RREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKT  245 (287)
T ss_dssp             EHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSC
T ss_pred             cHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCC
Confidence            99999999999999999999999999999 99999999986 899999999733     234567899999999999999


Q ss_pred             cccccccceEEeEEEEe------ceeeEEEeC
Q psy5933         323 GLNTLQNNYTVLAGEAN------GCVTQYKDN  348 (406)
Q Consensus       323 GLnsl~~~Y~vl~~~~~------~lyT~i~~~  348 (406)
                      |||||  +|++++++.-      .+++||.+.
T Consensus       246 GLnsl--~Y~v~s~~~~~i~~~~~~~~nv~l~  275 (287)
T 3lw6_A          246 GLDNV--KYKILKVHEMLIDQVPVTILNILLD  275 (287)
T ss_dssp             SGGGC--CEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred             CCeee--EEEEEEEEEEEecCCCcEEEEEEEE
Confidence            99999  9999999877      777777443
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 406
d1pzta_271 c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4Ga 7e-67
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Length = 271 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  211 bits (539), Expect = 7e-67
 Identities = 94/233 (40%), Positives = 141/233 (60%), Gaps = 6/233 (2%)

Query: 117 NINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP 176
            +  GG + P DCI  H+VAII+P+ NR+  LK +L ++H  LQ+Q + Y I+VI Q   
Sbjct: 33  KVKLGGRYTPMDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGE 92

Query: 177 AEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYE 236
           + FNR KLLN+G+ EALK   ++CF+F DVDL+P N +N Y C  QPRH+SVA+D F + 
Sbjct: 93  SMFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFS 152

Query: 237 LPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQR-LSNYYSICRFSKQVSEYV 295
           LPY   FGG  A+ + QF  +NGF N Y+G G EDDD++ R      S+ R +  + +  
Sbjct: 153 LPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTR 212

Query: 296 MLNHAKETEK---LERLEKLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQY 345
           M+ H+++ +     +R +++ +      +DGLN+L   Y VL  +     T+ 
Sbjct: 213 MIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL--TYMVLEVQRYPLYTKI 263

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query406
d1pzta_271 beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos 100.0
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.62
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.89
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.23
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 97.09
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-80  Score=599.87  Aligned_cols=263  Identities=38%  Similarity=0.694  Sum_probs=253.4

Q ss_pred             CCCCCc-CCCcceeecccCCCChHHHHH-hcCCCCCCCeecCCCCcCCceEEEEEeecCchHHHHHHHHHHHHHHhhccc
Q psy5933          87 LCSIFE-KHSKMFNKNFVFNDTALNILH-TRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFI  164 (406)
Q Consensus        87 ~Cp~~~-~l~G~~~~~~~~~~~~~~~v~-~~~~~~~GG~~~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l  164 (406)
                      .||+.| .|+||+.|+++..++ +++++ .+|.|++||+|+|++|+|++|||||||||||++||+.||++|+++|++|++
T Consensus         2 ~cp~~~p~l~g~~~~~~~~~~~-~~~~~~~~~~~~~gg~~~p~~c~~~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~~   80 (271)
T d1pzta_           2 ACPEESPLLVGPMLIEFNIPVD-LKLVEQQNPKVKLGGRYTPMDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQL   80 (271)
T ss_dssp             BCCSSCTTCCCBCCCCCSSCCC-HHHHHHHCTTCBTTTEECCSSSBCSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCccCcCceEeecCCCCC-HHHHHHhCCCcCCCCEECCCCCcccceEEEEEecCChHHHHHHHHHHHHHHHHhcCC
Confidence            699986 999999999988877 99999 899999999999999999999999999999999999999999999999999


Q ss_pred             ceeEEEEEEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCceeeeeCCCcceeEEecccccccCCcccccc
Q psy5933         165 SYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFNYELPYCTIFG  244 (406)
Q Consensus       165 ~y~I~VIeQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY~c~~~PrHlS~~~dkf~yrlpy~~~fG  244 (406)
                      +|.|+||||.++.+||||+++|+||.+|++..++||+|||||||+|+++.+.|.|.+.|+|++.+.++++|+++|..++|
T Consensus        81 ~y~I~vieQ~~~~~FNRg~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y~~~~~p~h~~~~~~~~~~~~~y~~~~G  160 (271)
T d1pzta_          81 DYGIYVINQAGESMFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFSLPYVQYFG  160 (271)
T ss_dssp             EEEEEEEEECSSSCCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCSCCSSCEECCCEEGGGTTSCSCTTCCC
T ss_pred             CEEEEEEeccCCcchhhhhhhhHHHHHhhhccCccEEEEecCCcCcccccccccccccCcceeeeccccccccccccccc
Confidence            99999999999999999999999999999988999999999999999999999999999999999999999999999999


Q ss_pred             ceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecccceeeEEeccCC---CcchhHHHHHHHHcCCceec
Q psy5933         245 GAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEYVMLNHA---KETEKLERLEKLENGPFRFK  320 (406)
Q Consensus       245 Gv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~~~grY~ml~Hk---~~~~N~~R~~ll~~~~~r~~  320 (406)
                      ||++|+++||.+||||||.|||||||||||..|+ .+|+++.|++..+++|+|+.|.   .+..|++|++++.++++||.
T Consensus       161 Gv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~~~~~y~~l~H~~d~~~~~n~~r~~~l~~~~~~~~  240 (271)
T d1pzta_         161 GVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPNPQRFDRIAHTKETML  240 (271)
T ss_dssp             SEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCTTTTEEEECCCSSCCCCCCCCCCCCCHHHHHHHTT
T ss_pred             eeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCCCccccceeeccCCcccccchHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999 9999999999999999999994   35578889999999999999


Q ss_pred             cCcccccccceEEeEEEEeceeeEEEeCCCCcceeeEeccC
Q psy5933         321 TDGLNTLQNNYTVLAGEANGCVTQYKDNSSIDSCSFDLQVP  361 (406)
Q Consensus       321 ~DGLnsl~~~Y~vl~~~~~~lyT~i~~~~~~~~~~v~~~~~  361 (406)
                      .||||||  +|++++++.+||||+|         +|||++|
T Consensus       241 ~dGLnsl--~Y~v~~~~~~~lyt~i---------~Vdi~~p  270 (271)
T d1pzta_         241 SDGLNSL--TYMVLEVQRYPLYTKI---------TVDIGTP  270 (271)
T ss_dssp             TSSGGGC--CCEEEEEEECSSCEEE---------EEECCSC
T ss_pred             CCCCcce--EEEEeEEEecCCeEEE---------EEEccCC
Confidence            9999999  9999999999999999         7777766
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure