Psyllid ID: psy6087

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MNFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN
Secondary Structure (PSIPRED)
cccccHHHHHcccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHcccccccccccEEEcccEEEEEEEEEcHHHHHHHHHHHHcccEEEEEEEcHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccccccccccHHHcccHHHcEEccHHHEEEEEEccHHHHHHHHHHHHHHccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccEEEccEccHHHHHHHHHHHHHHHHHHccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mnfntivqwsnpsgsllTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAmivprssqlvsqdQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAmivprssqlvsqdQDFALYTVTLFKKVQDEFRHHAREKN
Flexible Loop (DISEMBL)
mnfntivqwsnpsgslLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHArekkfivrefvyneeELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN
Low Complexity Region (SEG)
MNFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN
Disordered region (IsUnstruct)
*****IVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQ***********
Disordered Region (DISOPRED)
**************SLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEE***************TAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHA****
Disordered Region (DISEMBL)
MNFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEF********
Disordered Region (DISPRO)
*N***IVQWS*PSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNxxxxxxxxxxxxxxxxxxxxxIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q9V7N5	836	V-type proton ATPase subu	yes	N/A	0.714	0.143	0.642	7e-41
Q9U5N1	385	V-type proton ATPase subu	N/A	N/A	0.678	0.296	0.658	5e-40
Q5XH14	382	V-type proton ATPase subu	N/A	N/A	0.607	0.267	0.617	3e-33
Q6P4Y9	382	V-type proton ATPase subu	yes	N/A	0.607	0.267	0.617	8e-33
Q5FVI6	382	V-type proton ATPase subu	yes	N/A	0.607	0.267	0.637	1e-32
Q7T385	383	V-type proton ATPase subu	yes	N/A	0.607	0.266	0.617	3e-32
P21282	382	V-type proton ATPase subu	yes	N/A	0.607	0.267	0.617	8e-32
Q9Z1G3	382	V-type proton ATPase subu	yes	N/A	0.607	0.267	0.617	8e-32
Q5RDQ7	382	V-type proton ATPase subu	yes	N/A	0.607	0.267	0.617	9e-32
Q4R5H9	382	V-type proton ATPase subu	N/A	N/A	0.607	0.267	0.617	9e-32

>sp|Q9V7N5|VATC_DROME V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=2 SV=5

 Score =  166 bits (420), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 79/123 (64%), Positives = 101/123 (82%), Gaps = 3/123 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVKKEHFILDSEYLTTLLV+VP+    +W+ NYEK+T MIVPRSSQL+ 
Sbjct: 607 TGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQ 666

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEKLTA 129
           +D D+ L+ VTLFKKV +EF+ HARE+KFIVR+FVYNEEEL   +N++T+ + + +K   
Sbjct: 667 EDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKKQFG 726

Query: 130 MIV 132
            +V
Sbjct: 727 PLV 729

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
Drosophila melanogaster (taxid: 7227)

>sp|Q9U5N1|VATC_MANSE V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1

 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 98/117 (83%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVKKEHFILDSEYLTTLLV+VP++   +W  NYEK+T MIVPRS+QL+ 
Sbjct: 157 TGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIH 216

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QD D+ L+TVTLFKKV DEF+ HARE+KF+VREF YNE +L   +N++T+ + + +K
Sbjct: 217 QDGDYGLFTVTLFKKVVDEFKLHARERKFVVREFAYNEADLVAGKNEITKLLTDKKK 273

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Manduca sexta (taxid: 7130)

>sp|Q5XH14|VATC1_XENLA V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1

 Score =  140 bits (354), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 85/102 (83%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSL+TR+LA++VKK+ F+LDSEYL TLLVVVP+N  T+W++ YE L+ M+VPRSS ++S
Sbjct: 158 AGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEYETLSEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KF+VR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFVVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Xenopus laevis (taxid: 8355)

>sp|Q6P4Y9|VATC1_XENTR V-type proton ATPase subunit C 1 OS=Xenopus tropicalis GN=atp6v1c1 PE=2 SV=1

 Score =  139 bits (350), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 83/102 (81%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSL+TR+LA++VKK+ F+LDSEYL TLLVVVP+N   +WV+ YE L  M+VPRSS ++S
Sbjct: 158 AGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYNDWVKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KF+VR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFVVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Xenopus tropicalis (taxid: 8364)

>sp|Q5FVI6|VATC1_RAT V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 82/102 (80%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct: 158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLFKK  D+FRH ARE KFIVR+F YNEEE+R
Sbjct: 218 EDQDSYLCNVTLFKKAVDDFRHKARENKFIVRDFQYNEEEMR 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Rattus norvegicus (taxid: 10116)

>sp|Q7T385|VTC1A_DANRE V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 81/102 (79%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LAD+VKK+ F+LDSEYL TLLVVVP+   T+W + YE L  M+VPRS+ L+ 
Sbjct: 158 AGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLF 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +D D  L+TVTLF+K  D+FRH ARE KF VR+F YNEEE++
Sbjct: 218 EDHDSGLFTVTLFRKAIDDFRHKARENKFTVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Danio rerio (taxid: 7955)

>sp|P21282|VATC1_BOVIN V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3

 Score =  135 bits (341), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct: 158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Bos taurus (taxid: 9913)

>sp|Q9Z1G3|VATC1_MOUSE V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4

 Score =  135 bits (341), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct: 158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Mus musculus (taxid: 10090)

>sp|Q5RDQ7|VATC1_PONAB V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1

 Score =  135 bits (341), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct: 158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Pongo abelii (taxid: 9601)

>sp|Q4R5H9|VATC1_MACFA V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1

 Score =  135 bits (341), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct: 158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
           +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct: 218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Macaca fascicularis (taxid: 9541)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
134141801	386	vacuolar ATPase subunit C [Lutzomyia lon	0.678	0.295	0.709	7e-41
193702420	387	PREDICTED: v-type proton ATPase subunit	0.714	0.310	0.682	7e-41
94469226	364	V-ATPase C subunit [Aedes aegypti]	0.678	0.313	0.700	1e-40
157140118	299	vacuolar ATP synthase subunit c [Aedes a	0.678	0.381	0.700	1e-40
157109023	695	vacuolar ATP synthase subunit c [Aedes a	0.714	0.172	0.674	1e-40
289740295	387	vacuolar H+-ATPase v1 sector subunit C [	0.678	0.294	0.683	3e-40
195429922	752	GK21692 [Drosophila willistoni] gi|19415	0.714	0.159	0.650	3e-40
170030920	528	vacuolar ATP synthase subunit C [Culex q	0.714	0.227	0.658	4e-40
307191540	402	Vacuolar proton pump subunit C [Camponot	0.678	0.283	0.683	4e-40
158294869	385	AGAP005845-PA [Anopheles gambiae str. PE	0.678	0.296	0.700	6e-40

>gi|134141801|gb|ABO61291.1| vacuolar ATPase subunit C [Lutzomyia longipalpis]

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 101/117 (86%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLAD+VK+EHFILDSEYLTTLLV+VP+  V +W  +YEKLT MIVPRS+Q ++
Sbjct: 158 TGSLLTRNLADIVKREHFILDSEYLTTLLVIVPKALVQDWNGHYEKLTDMIVPRSTQCIT 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QDQDFALYTVTLFKKV DEF+ HAREKKF+VREF YNEEEL   +N++T+ V + +K
Sbjct: 218 QDQDFALYTVTLFKKVVDEFKLHAREKKFVVREFTYNEEELAAGKNEITKLVTDKKK 274

Source: Lutzomyia longipalpis

Species: Lutzomyia longipalpis

Genus: Lutzomyia

Family: Psychodidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193702420|ref|XP_001946227.1| PREDICTED: v-type proton ATPase subunit C-like [Acyrthosiphon pisum]

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 103/123 (83%), Gaps = 3/123 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLV+KEHFI DSEYLTTLLVVVP++  ++W QNYEKLT MIVPRSSQLVS
Sbjct: 158 TGSLLTRNLADLVRKEHFIQDSEYLTTLLVVVPKSGFSDWNQNYEKLTDMIVPRSSQLVS 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEKLTA 129
           QD D+ L+TVTLFKKV +EF+HHARE+KFIVREF YNE EL   +N++++ V + +K   
Sbjct: 218 QDNDYGLFTVTLFKKVAEEFKHHARERKFIVREFTYNEVELAAGKNEISKLVTDKKKQFG 277

Query: 130 MIV 132
            +V
Sbjct: 278 PLV 280

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|94469226|gb|ABF18462.1| V-ATPase C subunit [Aedes aegypti]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 100/117 (85%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVK+EHFILDSEYLTTLLV+VP+  V +W  NYEK+T MIVPRSSQL++
Sbjct: 137 TGSLLTRNLADLVKREHFILDSEYLTTLLVIVPKQMVNDWNANYEKITDMIVPRSSQLIT 196

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QD D+AL TVTLFKKV DEF+ HARE+KF+VREF YNEEEL   +N++T+ V + +K
Sbjct: 197 QDNDYALCTVTLFKKVVDEFKLHARERKFVVREFTYNEEELAAGKNEITKLVTDKKK 253

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157140118|ref|XP_001647617.1| vacuolar ATP synthase subunit c [Aedes aegypti] gi|108866460|gb|EAT32285.1| AAEL015594-PA, partial [Aedes aegypti]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 100/117 (85%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVK+EHFILDSEYLTTLLV+VP+  V +W  NYEK+T MIVPRSSQL++
Sbjct: 102 TGSLLTRNLADLVKREHFILDSEYLTTLLVIVPKQMVNDWNANYEKITDMIVPRSSQLIT 161

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QD D+AL TVTLFKKV DEF+ HARE+KF+VREF YNEEEL   +N++T+ V + +K
Sbjct: 162 QDNDYALCTVTLFKKVVDEFKLHARERKFVVREFTYNEEELAAGKNEITKLVTDKKK 218

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109023|ref|XP_001650489.1| vacuolar ATP synthase subunit c [Aedes aegypti] gi|108879141|gb|EAT43366.1| AAEL005173-PA [Aedes aegypti]

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 102/123 (82%), Gaps = 3/123 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVK+EHFILDSEYLTTLLV+VP+  V +W  NYEK+T MIVPRSSQL++
Sbjct: 468 TGSLLTRNLADLVKREHFILDSEYLTTLLVIVPKQMVNDWNANYEKITDMIVPRSSQLIT 527

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEKLTA 129
           QD D+AL TVTLFKKV DEF+ HARE+KF+VREF YNEEEL   +N++T+ V + +K   
Sbjct: 528 QDNDYALCTVTLFKKVVDEFKLHARERKFVVREFTYNEEELAAGKNEITKLVTDKKKQFG 587

Query: 130 MIV 132
            +V
Sbjct: 588 PLV 590

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740295|gb|ADD18895.1| vacuolar H+-ATPase v1 sector subunit C [Glossina morsitans morsitans]

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 99/117 (84%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVKK+HFILDSEYLTTLLV+VP+    EW+ NYEK+T MIVPRSS L++
Sbjct: 158 TGSLLTRNLADLVKKDHFILDSEYLTTLLVIVPKIHCQEWIANYEKITDMIVPRSSTLIT 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QD D+ LY VTLFKKV +EF+ HAREKKFIVR+FVYNEEEL   +N++T+ + + +K
Sbjct: 218 QDNDYCLYNVTLFKKVVEEFKLHAREKKFIVRDFVYNEEELTAGKNEITKLITDKKK 274

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195429922|ref|XP_002063006.1| GK21692 [Drosophila willistoni] gi|194159091|gb|EDW73992.1| GK21692 [Drosophila willistoni]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 101/123 (82%), Gaps = 3/123 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           SGSLLTRNLADLVKKEHFILDSEYLTTLLV+VP+    +W+ NYEK+T MIVPRSSQL+ 
Sbjct: 523 SGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKAMANDWLANYEKITDMIVPRSSQLIK 582

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEKLTA 129
           +D D+ L+ VTLFKKV +EF+ HARE+KFIVR+FVYNEEEL   +N++T+ + + +K   
Sbjct: 583 EDPDYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEITKLMTDKKKQFG 642

Query: 130 MIV 132
            +V
Sbjct: 643 PLV 645

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030920|ref|XP_001843335.1| vacuolar ATP synthase subunit C [Culex quinquefasciatus] gi|167868815|gb|EDS32198.1| vacuolar ATP synthase subunit C [Culex quinquefasciatus]

 Score =  169 bits (428), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 102/123 (82%), Gaps = 3/123 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVK+EHFILDSEYLTTLLV+VP+  + +W  NYEK+T MIVPRSSQ+++
Sbjct: 301 TGSLLTRNLADLVKREHFILDSEYLTTLLVIVPKQMINDWNVNYEKITDMIVPRSSQMIT 360

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEKLTA 129
           QD D+AL TVTLFKKV DEF+ HARE+KF+VREF YNEEEL   +N++T+ V + +K   
Sbjct: 361 QDNDYALCTVTLFKKVVDEFKLHARERKFVVREFTYNEEELAAGKNEITKLVTDKKKQFG 420

Query: 130 MIV 132
            +V
Sbjct: 421 PLV 423

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191540|gb|EFN75043.1| Vacuolar proton pump subunit C [Camponotus floridanus]

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 100/117 (85%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +GSLLTRNLADLVKKEHFILDSEYLTTLLV+VPR+   +W   YEKLT MIVPRS+QL++
Sbjct: 173 TGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPRSNFQDWYSCYEKLTDMIVPRSTQLIT 232

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QD ++ L+T+TLFKKV DEF+ HAREKKFIVR+F+YNEEEL   +N++T+ V + +K
Sbjct: 233 QDSEYGLFTITLFKKVMDEFKLHAREKKFIVRDFIYNEEELAAGKNEITKLVTDKKK 289

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158294869|ref|XP_315870.4| AGAP005845-PA [Anopheles gambiae str. PEST] gi|157015765|gb|EAA11948.4| AGAP005845-PA [Anopheles gambiae str. PEST]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 100/117 (85%), Gaps = 3/117 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           SGSLLTRNLADLVKKEHFILDSEYLTTLLV+VP+  + +W  +YEK+T MIVPRSSQ ++
Sbjct: 158 SGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKANMGDWNAHYEKITDMIVPRSSQTIT 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
           QDQD+ L TVTLFKKV DEF+ HARE+KF+VREFVYNEEEL   +N++T+ V + +K
Sbjct: 218 QDQDYVLCTVTLFKKVVDEFKLHARERKFVVREFVYNEEELAAGKNEITKLVTDKKK 274

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
FB|FBgn0262511	836	Vha44 "Vacuolar H[+] ATPase 44	0.678	0.136	0.666	4.7e-37
RGD|1311082	382	Atp6v1c1 "ATPase, H+ transport	0.607	0.267	0.637	4.2e-31
ZFIN|ZDB-GENE-030616-612	383	atp6v1c1a "ATPase, H+ transpor	0.607	0.266	0.617	8.8e-31
UNIPROTKB|P21282	382	ATP6V1C1 "V-type proton ATPase	0.607	0.267	0.617	1.8e-30
UNIPROTKB|E2RSK6	404	ATP6V1C1 "Uncharacterized prot	0.607	0.252	0.617	1.8e-30
UNIPROTKB|E7EV59	307	ATP6V1C1 "V-type proton ATPase	0.607	0.332	0.617	1.8e-30
UNIPROTKB|P21283	382	ATP6V1C1 "V-type proton ATPase	0.607	0.267	0.617	1.8e-30
UNIPROTKB|Q4R5H9	382	ATP6V1C1 "V-type proton ATPase	0.607	0.267	0.617	1.8e-30
UNIPROTKB|Q5RDQ7	382	ATP6V1C1 "V-type proton ATPase	0.607	0.267	0.617	1.8e-30
MGI|MGI:1913585	382	Atp6v1c1 "ATPase, H+ transport	0.607	0.267	0.617	1.8e-30

FB|FBgn0262511 Vha44 "Vacuolar H[+] ATPase 44kD subunit" [Drosophila melanogaster (taxid:7227)]

 Score = 407 (148.3 bits), Expect = 4.7e-37, P = 4.7e-37
 Identities = 78/117 (66%), Positives = 99/117 (84%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTRNLADLVKKEHFILDSEYLTTLLV+VP+    +W+ NYEK+T MIVPRSSQL+ 
Sbjct:   607 TGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQ 666

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEEL---RNQVTEWVQNYEK 126
             +D D+ L+ VTLFKKV +EF+ HARE+KFIVR+FVYNEEEL   +N++T+ + + +K
Sbjct:   667 EDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKK 723

GO:0015992 "proton transport" evidence=ISS

GO:0000221 "vacuolar proton-transporting V-type ATPase, V1 domain" evidence=ISS;NAS

GO:0007557 "regulation of juvenile hormone biosynthetic process" evidence=TAS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=ISM;IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0033181 "plasma membrane proton-transporting V-type ATPase complex" evidence=IMP

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=ISM

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

RGD|1311082 Atp6v1c1 "ATPase, H+ transporting, lysosomal V1 subunit C1" [Rattus norvegicus (taxid:10116)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 65/102 (63%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLFKK  D+FRH ARE KFIVR+F YNEEE+R
Sbjct:   218 EDQDSYLCNVTLFKKAVDDFRHKARENKFIVRDFQYNEEEMR 259

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0006200 "ATP catabolic process" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA;ISO

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015992 "proton transport" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=ISO

GO:0045177 "apical part of cell" evidence=IDA

ZFIN|ZDB-GENE-030616-612 atp6v1c1a "ATPase, H+ transporting, lysosomal, V1 subunit C, isoform 1a" [Danio rerio (taxid:7955)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/102 (61%), Positives = 81/102 (79%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LAD+VKK+ F+LDSEYL TLLVVVP+   T+W + YE L  M+VPRS+ L+ 
Sbjct:   158 AGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLF 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +D D  L+TVTLF+K  D+FRH ARE KF VR+F YNEEE++
Sbjct:   218 EDHDSGLFTVTLFRKAIDDFRHKARENKFTVRDFQYNEEEMK 259

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0015992 "proton transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|P21282 ATP6V1C1 "V-type proton ATPase subunit C 1" [Bos taurus (taxid:9913)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0005886 "plasma membrane" evidence=ISS

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|E2RSK6 ATP6V1C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|E7EV59 ATP6V1C1 "V-type proton ATPase subunit C 1" [Homo sapiens (taxid:9606)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:    83 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 142

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   143 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 184

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

UNIPROTKB|P21283 ATP6V1C1 "V-type proton ATPase subunit C 1" [Homo sapiens (taxid:9606)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=TAS

GO:0005215 "transporter activity" evidence=NAS

GO:0015992 "proton transport" evidence=TAS

GO:0016469 "proton-transporting two-sector ATPase complex" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006879 "cellular iron ion homeostasis" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0033572 "transferrin transport" evidence=TAS

GO:0051701 "interaction with host" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0090382 "phagosome maturation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q4R5H9 ATP6V1C1 "V-type proton ATPase subunit C 1" [Macaca fascicularis (taxid:9541)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|Q5RDQ7 ATP6V1C1 "V-type proton ATPase subunit C 1" [Pongo abelii (taxid:9601)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0005886 "plasma membrane" evidence=ISS

MGI|MGI:1913585 Atp6v1c1 "ATPase, H+ transporting, lysosomal V1 subunit C1" [Mus musculus (taxid:10090)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/102 (61%), Positives = 82/102 (80%)

Query:    13 SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
             +GSLLTR+LA++VKK+ F+LDSEYL TLLVVVP+    +W++ YE L  M+VPRSS ++S
Sbjct:   158 AGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLS 217

Query:    73 QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELR 114
             +DQD  L  VTLF+K  D+FRH ARE KFIVR+F YNEEE++
Sbjct:   218 EDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMK 259

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IDA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015992 "proton transport" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=IDA

GO:0045177 "apical part of cell" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6P4Y9	VATC1_XENTR	No assigned EC number	0.6176	0.6071	0.2670	yes	N/A
Q9XXU9	VATC_CAEEL	No assigned EC number	0.6037	0.5833	0.2552	yes	N/A
Q7T385	VTC1A_DANRE	No assigned EC number	0.6176	0.6071	0.2663	yes	N/A
Q9V7N5	VATC_DROME	No assigned EC number	0.6422	0.7142	0.1435	yes	N/A
P21283	VATC1_HUMAN	No assigned EC number	0.6176	0.6071	0.2670	yes	N/A
P21282	VATC1_BOVIN	No assigned EC number	0.6176	0.6071	0.2670	yes	N/A
Q5FVI6	VATC1_RAT	No assigned EC number	0.6372	0.6071	0.2670	yes	N/A
Q9Z1G3	VATC1_MOUSE	No assigned EC number	0.6176	0.6071	0.2670	yes	N/A
Q5RDQ7	VATC1_PONAB	No assigned EC number	0.6176	0.6071	0.2670	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	168
pfam03223	371	pfam03223, V-ATPase_C, V-ATPase subunit C	2e-53
COG5127	383	COG5127, COG5127, Vacuolar H+-ATPase V1 sector, su	2e-27
pfam03223	371	pfam03223, V-ATPase_C, V-ATPase subunit C	9e-21
COG5127	383	COG5127, COG5127, Vacuolar H+-ATPase V1 sector, su	5e-08

>gnl|CDD|217433 pfam03223, V-ATPase_C, V-ATPase subunit C

 Score =  172 bits (439), Expect = 2e-53
 Identities = 57/107 (53%), Positives = 85/107 (79%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +G+L  R+LAD+VK E F+LDSEYLTT+LV VP+N V +++ +YE L+ M+VPRS+++++
Sbjct: 158 TGNLSVRSLADIVKPEDFVLDSEYLTTVLVAVPKNSVKDFLASYETLSDMVVPRSAKVIA 217

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTE 119
           +D ++AL+TVTLFKKV ++F+   REKKFIVR+F Y+EE    +  E
Sbjct: 218 EDDEYALFTVTLFKKVVEDFKTKCREKKFIVRDFKYSEELSEEEKRE 264

Length = 371

>gnl|CDD|227456 COG5127, COG5127, Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

 Score =  105 bits (263), Expect = 2e-27
 Identities = 44/120 (36%), Positives = 73/120 (60%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
            GSL   +L  +V++E  +  SE+LT + V VP+  V E+ ++YE L+  + P S++ V+
Sbjct: 157 RGSLSDISLGIIVEREDVVEGSEFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVN 216

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMIV 132
            D+++ L+ V +FKK +++FR  ARE+KF+VREF  N       + E  +  EK +AM  
Sbjct: 217 SDEEYVLFKVYVFKKGEEDFRTMAREEKFMVREFDKNMVLSEEMIAERDRAAEKESAMEK 276

Length = 383

>gnl|CDD|217433 pfam03223, V-ATPase_C, V-ATPase subunit C

 Score = 86.9 bits (216), Expect = 9e-21
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 10/77 (12%)

Query: 102 IVRE--FVYNEEELR--------NQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVT 151
           IV+   FV + E L         N V +++ +YE L+ M+VPRS++++++D ++AL+TVT
Sbjct: 169 IVKPEDFVLDSEYLTTVLVAVPKNSVKDFLASYETLSDMVVPRSAKVIAEDDEYALFTVT 228

Query: 152 LFKKVQDEFRHHAREKN 168
           LFKKV ++F+   REK 
Sbjct: 229 LFKKVVEDFKTKCREKK 245

Length = 371

>gnl|CDD|227456 COG5127, COG5127, Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

 Score = 50.7 bits (121), Expect = 5e-08
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 8/71 (11%)

Query: 105 EFVYNEEELR--------NQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKV 156
           + V   E L           V E+ ++YE L+  + P S++ V+ D+++ L+ V +FKK 
Sbjct: 173 DVVEGSEFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKG 232

Query: 157 QDEFRHHAREK 167
           +++FR  ARE+
Sbjct: 233 EEDFRTMAREE 243

Length = 383

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PF03223	371	V-ATPase_C: V-ATPase subunit C; InterPro: IPR00490	100.0
KOG2909|consensus	381		100.0
COG5127	383	Vacuolar H+-ATPase V1 sector, subunit C [Energy pr	100.0
PF03223	371	V-ATPase_C: V-ATPase subunit C; InterPro: IPR00490	99.79
KOG2909|consensus	381		99.71
COG5127	383	Vacuolar H+-ATPase V1 sector, subunit C [Energy pr	99.29

>PF03223 V-ATPase_C: V-ATPase subunit C; InterPro: IPR004907 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=6.8e-47  Score=336.14  Aligned_cols=117  Identities=55%  Similarity=0.939  Sum_probs=91.8

Q ss_pred             cccccccccCCCCCccccccccccCCCCccccCcceeEEEEEecCCCHHHHHHhhhhhcCccccCCccceeecCCeeeEE
Q psy6087           2 NFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYT   81 (168)
Q Consensus         2 ~~~~~~~~Rk~~GnL~~r~L~dvV~~e~~v~dsEyLtTl~V~VPk~~~~~w~~~YE~l~~~VVPrSs~~i~eD~e~~L~~   81 (168)
                      +++++.  ||++|||++|||++||+|+|||+|||||||++|||||++++||+++||+|++|||||||++|++|+||+||+
T Consensus       147 ~l~~~~--RK~~GnL~~rsL~~iV~~ed~v~dSEyL~Tl~VvVPk~~~~ewl~~YEtL~~~VVPrSs~~i~eD~ey~L~~  224 (371)
T PF03223_consen  147 NLQALE--RKQTGNLSVRSLSDIVKPEDFVLDSEYLTTLLVVVPKNSVKEWLKSYETLTDMVVPRSSKKIAEDSEYVLFS  224 (371)
T ss_dssp             HHHHHH--HHT-S-TTTS--TTT--GGGS--S-SSEEEEEEEEEGGGHHHHHHHGGGSSTTB-TT--EEEEE-SSEEEEE
T ss_pred             HHHHHh--hhccCccccccHHhhCCHHhcccccccceEEEEEechhhHHHHHHHHhccCCccCCChHHhhhcCCCeEEEE
Confidence            356666  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeechHHHHHHHHHhcCCeeEEEeechhhhhhhHHHH
Q psy6087          82 VTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEW  120 (168)
Q Consensus        82 V~lFkk~v~~F~~~~re~kf~vRdF~y~ee~~~sskKEw  120 (168)
                      |||||+++++|+++|||+||+||||+|+|+.++..++|.
T Consensus       225 VtlFkk~~~eF~~~~re~kf~vRdF~y~ee~~~~~~~e~  263 (371)
T PF03223_consen  225 VTLFKKVVDEFKNKCREKKFIVRDFKYDEEESEEEKEER  263 (371)
T ss_dssp             EEEEGGGHHHHHHHHHHTT-EEE-----HHHHHHHHHHH
T ss_pred             EEEEeccHHHHHHHHHHcCCeeeecccCHHHHHHHHHHH
Confidence            999999999999999999999999999999887655444

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C subunit that is part of the V1 complex, and is localised to the interface between the V1 and V0 complexes []. This subunit does not show any homology with F-ATPase subunits. The C subunit plays an essential role in controlling the assembly of V-ATPase, acting as a flexible stator that holds together the catalytic (V1) and membrane (V0) sectors of the enzyme []. The release of subunit C from the ATPase complex results in the dissociation of the V1 and V0 subcomplexes, which is an important mechanism in controlling V-ATPase activity in cells. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0033180 proton-transporting V-type ATPase, V1 domain; PDB: 1U7L_A.

>KOG2909|consensus

Probab=100.00  E-value=1.4e-44  Score=317.68  Aligned_cols=128  Identities=52%  Similarity=0.846  Sum_probs=121.2

Q ss_pred             cccccccccCCCCCccccccccccCCCCccccCcceeEEEEEecCCCHHHHHHhhhhhcCccccCCccceeecCCeeeEE
Q psy6087           2 NFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYT   81 (168)
Q Consensus         2 ~~~~~~~~Rk~~GnL~~r~L~dvV~~e~~v~dsEyLtTl~V~VPk~~~~~w~~~YE~l~~~VVPrSs~~i~eD~e~~L~~   81 (168)
                      |+|+|.  ||++|||++|||++||+|||||+|||||+||+|||||.+++||+++||||++||||||+++|.||.||.||+
T Consensus       150 nl~nle--rK~~GsL~~rsL~~IVk~edfvl~SEyL~tllVvVPK~~~~df~~~YEtlsd~VvPrSskki~eD~Ey~Lf~  227 (381)
T KOG2909|consen  150 NLQNLE--RKKTGSLSTRSLADIVKKEDFVLDSEYLTTLLVVVPKALVKDFLKSYETLSDMVVPRSSKKINEDAEYVLFT  227 (381)
T ss_pred             HHHHHh--hhccCChhhhhHHHhCCchhhccchhhheeEEEEeeccchHHHHHHHHhhccccchhhhhhcccccceEEEE
Confidence            678888  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeechHHHHHHHHHhcCCeeEEEeechhhhhhhHHHHHHhhhhhcCce
Q psy6087          82 VTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAMI  131 (168)
Q Consensus        82 V~lFkk~v~~F~~~~re~kf~vRdF~y~ee~~~sskKEw~~~Ye~l~~~V  131 (168)
                      |+||||.+|+|+++|||+||+||||.|+++.++..++|+-..-+....|-
T Consensus       228 V~lFkk~~edFr~~ArE~kF~vRdF~y~ee~~e~~k~E~~ra~~~~k~~~  277 (381)
T KOG2909|consen  228 VTLFKKVAEDFRTKAREKKFIVRDFDYNEEEIETEKAEMDRAATDKKSMR  277 (381)
T ss_pred             EEEeehhHHHHHHHHHHcCCceeeccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999877665554443

>COG5127 Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=100.00  E-value=4.9e-34  Score=248.94  Aligned_cols=127  Identities=35%  Similarity=0.545  Sum_probs=121.0

Q ss_pred             cccccccccCCCCCccccccccccCCCCccccCcceeEEEEEecCCCHHHHHHhhhhhcCccccCCccceeecCCeeeEE
Q psy6087           2 NFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYT   81 (168)
Q Consensus         2 ~~~~~~~~Rk~~GnL~~r~L~dvV~~e~~v~dsEyLtTl~V~VPk~~~~~w~~~YE~l~~~VVPrSs~~i~eD~e~~L~~   81 (168)
                      ++++|+  ||++|||+.+||++||+++|++.+|||||+++|||||+...+|+++||||++.|+|+|+.++++|.||.||+
T Consensus       148 ~~~~~q--rk~~G~Ls~~sL~~IV~~eDvv~gse~Lt~v~vaVpk~l~~~F~~syeTls~~V~p~sa~kv~~D~EyvLf~  225 (383)
T COG5127         148 ECEKLQ--RKTRGSLSDISLGIIVEREDVVEGSEFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFK  225 (383)
T ss_pred             HHHHHH--hhccCChhhhhHhhhcCchhhccchhhheeeEEEehhhhhHHHHhhhhhcCcccChhHHhhhcCccceEEEE
Confidence            456677  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeechHHHHHHHHHhcCCeeEEEeechhhhhhhHHHHHHhhhhhcCc
Q psy6087          82 VTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEWVQNYEKLTAM  130 (168)
Q Consensus        82 V~lFkk~v~~F~~~~re~kf~vRdF~y~ee~~~sskKEw~~~Ye~l~~~  130 (168)
                      |.+|||-+++|.++|||+||+||||.|+++..+.++.|+-..-+..+.|
T Consensus       226 V~vfkk~~~~f~t~are~kf~vref~~~~~l~e~~~~e~d~Aa~ke~~m  274 (383)
T COG5127         226 VYVFKKGEEDFRTMAREEKFMVREFDKNMVLSEEMIAERDRAAEKESAM  274 (383)
T ss_pred             EEEEecChHHHHHHHHhcCcchhhcchhhhhHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999999999999999999999999998877776665

>PF03223 V-ATPase_C: V-ATPase subunit C; InterPro: IPR004907 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.79  E-value=7.6e-20  Score=163.23  Aligned_cols=55  Identities=53%  Similarity=0.992  Sum_probs=49.7

Q ss_pred             hhhHHHHHHhhhhhcCceecCCcccccccCCeeEEEEEEeeecHHHHHHHHhhcC
Q psy6087         114 RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN  168 (168)
Q Consensus       114 ~sskKEw~~~Ye~l~~~VVPrSs~~i~~d~e~~L~~V~lFkk~~~~F~~~~re~~  168 (168)
                      ++..+||+++||+|++|||||||++|++|+||+||+||||||++++|+++|||+|
T Consensus       189 k~~~~ewl~~YEtL~~~VVPrSs~~i~eD~ey~L~~VtlFkk~~~eF~~~~re~k  243 (371)
T PF03223_consen  189 KNSVKEWLKSYETLTDMVVPRSSKKIAEDSEYVLFSVTLFKKVVDEFKNKCREKK  243 (371)
T ss_dssp             GGGHHHHHHHGGGSSTTB-TT--EEEEE-SSEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHhccCCccCCChHHhhhcCCCeEEEEEEEEeccHHHHHHHHHHcC
Confidence            5889999999999999999999999999999999999999999999999999986

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C subunit that is part of the V1 complex, and is localised to the interface between the V1 and V0 complexes []. This subunit does not show any homology with F-ATPase subunits. The C subunit plays an essential role in controlling the assembly of V-ATPase, acting as a flexible stator that holds together the catalytic (V1) and membrane (V0) sectors of the enzyme []. The release of subunit C from the ATPase complex results in the dissociation of the V1 and V0 subcomplexes, which is an important mechanism in controlling V-ATPase activity in cells. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0033180 proton-transporting V-type ATPase, V1 domain; PDB: 1U7L_A.

>KOG2909|consensus

Probab=99.71  E-value=4.8e-18  Score=150.35  Aligned_cols=64  Identities=47%  Similarity=0.870  Sum_probs=58.8

Q ss_pred             EEeechhhh--------hhhHHHHHHhhhhhcCceecCCcccccccCCeeEEEEEEeeecHHHHHHHHhhcC
Q psy6087         105 EFVYNEEEL--------RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN  168 (168)
Q Consensus       105 dF~y~ee~~--------~sskKEw~~~Ye~l~~~VVPrSs~~i~~d~e~~L~~V~lFkk~~~~F~~~~re~~  168 (168)
                      ||..+.|.+        +...+||+++||||++|||||||++|++|.||.||+||||||.+|+|+++|||+|
T Consensus       175 dfvl~SEyL~tllVvVPK~~~~df~~~YEtlsd~VvPrSskki~eD~Ey~Lf~V~lFkk~~edFr~~ArE~k  246 (381)
T KOG2909|consen  175 DFVLDSEYLTTLLVVVPKALVKDFLKSYETLSDMVVPRSSKKINEDAEYVLFTVTLFKKVAEDFRTKAREKK  246 (381)
T ss_pred             hhccchhhheeEEEEeeccchHHHHHHHHhhccccchhhhhhcccccceEEEEEEEeehhHHHHHHHHHHcC
Confidence            666665544        5889999999999999999999999999999999999999999999999999987

>COG5127 Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=99.29  E-value=2.2e-12  Score=113.68  Aligned_cols=55  Identities=35%  Similarity=0.675  Sum_probs=53.3

Q ss_pred             hhhHHHHHHhhhhhcCceecCCcccccccCCeeEEEEEEeeecHHHHHHHHhhcC
Q psy6087         114 RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN  168 (168)
Q Consensus       114 ~sskKEw~~~Ye~l~~~VVPrSs~~i~~d~e~~L~~V~lFkk~~~~F~~~~re~~  168 (168)
                      .+...||+++||||++.|+|+|+++|++|.||.||+|.+|||-.++|+++|||.|
T Consensus       190 k~l~~~F~~syeTls~~V~p~sa~kv~~D~EyvLf~V~vfkk~~~~f~t~are~k  244 (383)
T COG5127         190 KALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKGEEDFRTMAREEK  244 (383)
T ss_pred             hhhhHHHHhhhhhcCcccChhHHhhhcCccceEEEEEEEEecChHHHHHHHHhcC
Confidence            5889999999999999999999999999999999999999999999999999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
4dl0_I	130	Crystal Structure Of The Heterotrimeric Egchead Per		2e-21
4dl0_I	130	Crystal Structure Of The Heterotrimeric Egchead Per		4e-05
1u7l_A	392	Crystal Structure Of Subunit C (Vma5p) Of The Yeast		4e-21
1u7l_A	392	Crystal Structure Of Subunit C (Vma5p) Of The Yeast		3e-05

>pdb|4DL0|I Chain I, Crystal Structure Of The Heterotrimeric Egchead Peripheral Stalk Complex Of The Yeast Vacuolar Atpase Length = 130

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 72/99 (72%)
Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +G L  R+L D+VK E F+L+SE+LTT+LV VP++  +++ ++YE L+  +VP S+ +++
Sbjct: 20  TGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIA 79
Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEE 111
           +D ++ L+ V LFKK   EF   AREKKFI REF Y+EE
Sbjct: 80  EDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEE 118

>pdb|4DL0|I Chain I, Crystal Structure Of The Heterotrimeric Egchead Peripheral Stalk Complex Of The Yeast Vacuolar Atpase Length = 130

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 105 EFVYNEEEL--------RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKV 156
           +FV N E L        ++  +++ ++YE L+  +VP S+ ++++D ++ L+ V LFKK 
Sbjct: 36  DFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKN 95
Query: 157 QDEFRHHAREK 167
             EF   AREK
Sbjct: 96  VQEFTTAAREK 106

>pdb|1U7L|A Chain A, Crystal Structure Of Subunit C (Vma5p) Of The Yeast V-Atpase Length = 392

Iteration: 1
 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 72/99 (72%)
Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +G L  R+L D+VK E F+L+SE+LTT+LV VP++  +++ ++YE L+  +VP S+ +++
Sbjct: 167 TGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIA 226
Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEE 111
           +D ++ L+ V LFKK   EF   AREKKFI REF Y+EE
Sbjct: 227 EDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEE 265

>pdb|1U7L|A Chain A, Crystal Structure Of Subunit C (Vma5p) Of The Yeast V-Atpase Length = 392

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 105 EFVYNEEEL--------RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKV 156
           +FV N E L        ++  +++ ++YE L+  +VP S+ ++++D ++ L+ V LFKK 
Sbjct: 183 DFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKN 242
Query: 157 QDEFRHHAREK 167
             EF   AREK
Sbjct: 243 VQEFTTAAREK 253

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	7e-44
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	6e-18

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1 Length = 392

 Score =  148 bits (374), Expect = 7e-44
 Identities = 48/107 (44%), Positives = 74/107 (69%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +G L  R+L D+VK E F+L+SE+LTT+LV VP++  +++ ++YE L+  +VP S+ +++
Sbjct: 167 TGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIA 226

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTE 119
           +D ++ L+ V LFKK   EF   AREKKFI REF Y+EE +     E
Sbjct: 227 EDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKE 273

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1 Length = 392

 Score = 78.5 bits (193), Expect = 6e-18
 Identities = 19/55 (34%), Positives = 36/55 (65%)

Query: 114 RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN 168
           ++  +++ ++YE L+  +VP S+ ++++D ++ L+ V LFKK   EF   AREK 
Sbjct: 200 KSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKK 254

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	100.0
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	99.8

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1

Probab=100.00  E-value=1.1e-47  Score=342.06  Aligned_cols=117  Identities=42%  Similarity=0.688  Sum_probs=111.5

Q ss_pred             cccccccccCCCCCccccccccccCCCCccccCcceeEEEEEecCCCHHHHHHhhhhhcCccccCCccceeecCCeeeEE
Q psy6087           2 NFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYT   81 (168)
Q Consensus         2 ~~~~~~~~Rk~~GnL~~r~L~dvV~~e~~v~dsEyLtTl~V~VPk~~~~~w~~~YE~l~~~VVPrSs~~i~eD~e~~L~~   81 (168)
                      |++++.  ||++|||++|||++||+|||||+|||||||++|||||++++||+++||+|++|||||||++|++|+||+||+
T Consensus       158 ~l~~~~--RK~~GnL~~rsL~~iV~~edfv~dSEyL~TllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~ey~L~~  235 (392)
T 1u7l_A          158 NLAAAE--RKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFN  235 (392)
T ss_dssp             HHHHHH--HHTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEE
T ss_pred             HHHHHh--cccCCceeeeeHHHhcCHHHccCccccceEEEEEEeCccHHHHHHHHhhcCCCccCChhhhhhcCCCceEEE
Confidence            456666  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeechHHHHHHHHHhcCCeeEEEeechhhhhhhHHHH
Q psy6087          82 VTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEW  120 (168)
Q Consensus        82 V~lFkk~v~~F~~~~re~kf~vRdF~y~ee~~~sskKEw  120 (168)
                      ||||||++++|+++|||+||+||||+|+|+++++.++|.
T Consensus       236 VtlFkk~~~eF~~~~Re~kf~vRdF~y~ee~~~~~~~e~  274 (392)
T 1u7l_A          236 VHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEH  274 (392)
T ss_dssp             EEEEGGGHHHHHHHHHHTTCEEECCCCCHHHHHHHHHHH
T ss_pred             EEEEhhhHHHHHHHHHHcCCccccCcCCHHHHHHHHHHH
Confidence            999999999999999999999999999999987666554

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1

Probab=99.80  E-value=2.8e-20  Score=165.75  Aligned_cols=55  Identities=35%  Similarity=0.675  Sum_probs=53.8

Q ss_pred             hhhHHHHHHhhhhhcCceecCCcccccccCCeeEEEEEEeeecHHHHHHHHhhcC
Q psy6087         114 RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN  168 (168)
Q Consensus       114 ~sskKEw~~~Ye~l~~~VVPrSs~~i~~d~e~~L~~V~lFkk~~~~F~~~~re~~  168 (168)
                      ++..+||+++||||++|||||||++|++|+||+||+||||||++++|+++|||+|
T Consensus       200 k~~~~dwl~~YEtL~~~VVPrSs~~i~~D~ey~L~~VtlFkk~~~eF~~~~Re~k  254 (392)
T 1u7l_A          200 KSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKK  254 (392)
T ss_dssp             GGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred             CccHHHHHHHHhhcCCCccCChhhhhhcCCCceEEEEEEEhhhHHHHHHHHHHcC
Confidence            6889999999999999999999999999999999999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	168
d1u7la_	388	e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Bak	2e-48
d1u7la_	388	e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Bak	4e-20

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  158 bits (402), Expect = 2e-48
 Identities = 49/118 (41%), Positives = 78/118 (66%), Gaps = 3/118 (2%)

Query: 13  SGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVS 72
           +G L  R+L D+VK E F+L+SE+LTT+LV VP++  +++ ++YE L+  +VP S+ +++
Sbjct: 163 TGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIA 222

Query: 73  QDQDFALYTVTLFKKVQDEFRHHAREKKFIVREFVYNEE---ELRNQVTEWVQNYEKL 127
           +D ++ L+ V LFKK   EF   AREKKFI REF Y+EE   +L+ +        + L
Sbjct: 223 EDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSL 280

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.7 bits (207), Expect = 4e-20
 Identities = 19/55 (34%), Positives = 36/55 (65%)

Query: 114 RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN 168
           ++  +++ ++YE L+  +VP S+ ++++D ++ L+ V LFKK   EF   AREK 
Sbjct: 196 KSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKK 250

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d1u7la_	388	Vacuolar ATP synthase subunit C {Baker's yeast (Sa	100.0
d1u7la_	388	Vacuolar ATP synthase subunit C {Baker's yeast (Sa	99.79

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-47  Score=338.14  Aligned_cols=117  Identities=42%  Similarity=0.688  Sum_probs=112.1

Q ss_pred             cccccccccCCCCCccccccccccCCCCccccCcceeEEEEEecCCCHHHHHHhhhhhcCccccCCccceeecCCeeeEE
Q psy6087           2 NFNTIVQWSNPSGSLLTRNLADLVKKEHFILDSEYLTTLLVVVPRNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYT   81 (168)
Q Consensus         2 ~~~~~~~~Rk~~GnL~~r~L~dvV~~e~~v~dsEyLtTl~V~VPk~~~~~w~~~YE~l~~~VVPrSs~~i~eD~e~~L~~   81 (168)
                      |++++.  ||++|||++|||++||+|+|||+|||||||++|||||++++||+++||+|++|||||||++|++|+||+||+
T Consensus       154 ~l~~~~--RK~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~  231 (388)
T d1u7la_         154 NLAAAE--RKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFN  231 (388)
T ss_dssp             HHHHHH--HHTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEE
T ss_pred             HHHHHh--hccCCceeeccHHhhCCHHHhccccccceEEEEEeecccHHHHHHHHhhhcCcccCChhhhceecCCeeEEE
Confidence            466777  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeechHHHHHHHHHhcCCeeEEEeechhhhhhhHHHH
Q psy6087          82 VTLFKKVQDEFRHHAREKKFIVREFVYNEEELRNQVTEW  120 (168)
Q Consensus        82 V~lFkk~v~~F~~~~re~kf~vRdF~y~ee~~~sskKEw  120 (168)
                      ||+|||++++|+++|||+||+||||.|+|+.+++.++|.
T Consensus       232 VtlFkk~~~eF~~~aRE~kf~vRdF~y~ee~~~~~~~e~  270 (388)
T d1u7la_         232 VHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEH  270 (388)
T ss_dssp             EEEEGGGHHHHHHHHHHTTCEEECCCCCHHHHHHHHHHH
T ss_pred             EEEEhhhHHHHHHHHHHcCcccccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999988776655

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=2.7e-20  Score=163.57  Aligned_cols=64  Identities=38%  Similarity=0.711  Sum_probs=58.6

Q ss_pred             EEeechhhh--------hhhHHHHHHhhhhhcCceecCCcccccccCCeeEEEEEEeeecHHHHHHHHhhcC
Q psy6087         105 EFVYNEEEL--------RNQVTEWVQNYEKLTAMIVPRSSQLVSQDQDFALYTVTLFKKVQDEFRHHAREKN  168 (168)
Q Consensus       105 dF~y~ee~~--------~sskKEw~~~Ye~l~~~VVPrSs~~i~~d~e~~L~~V~lFkk~~~~F~~~~re~~  168 (168)
                      ||..|.|.+        +++.+||+++||+|++|||||||++|++|+||+||+||||||++++|+++|||+|
T Consensus       179 d~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~eF~~~aRE~k  250 (388)
T d1u7la_         179 DFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKK  250 (388)
T ss_dssp             GSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred             HhccccccceEEEEEeecccHHHHHHHHhhhcCcccCChhhhceecCCeeEEEEEEEhhhHHHHHHHHHHcC
Confidence            555555544        6889999999999999999999999999999999999999999999999999987