Psyllid ID: psy6410


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIYS
ccccEEEEEEEEEEccccccccccEEEEEEEccccEEccEEEEEEEEEEEcccccccccccccccEEEccEEEEcccccccccccccEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEccccccccccEEEccccccccEEEEEEcccccccEEEEcccccEEEcc
ccccEEEEEEEEcccccccccccccEEEEEEccccccccccEEEEEEEEEccccccccccccccccccccEEEEcccccccccccccEEEEEEccccEEEEEEEEEEEEEEcccEEEEEcccccccccccEEEccccccHHHHHEEcccccccccEEEEEccccEEEEc
mpttqveqtitygpyenvppytkanitihyennspfLVVTRLVRQIEVShwgtlniesftsvmpttqveqtitygpyenvppytkanitihyennspfLVVTRLVRQIEVSHWEhihlkhdgaklkgtfsrydyqrdsahgikSFKTIlpaaasdayyrdeigkRFIYS
mpttqveqtitygpyenvPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWgtlniesftsvmPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWehihlkhdgaklkgTFSRYDYQRDsahgiksfktilpaaasdayyrDEIGKRFIYS
MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIYS
********TITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFI**
****QVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIE************************ITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIY*
MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIYS
MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIYS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWEHIHLKHDGAKLKGTFSRYDYQRDSAHGIKSFKTILPAAASDAYYRDEIGKRFIYS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query169 2.2.26 [Sep-21-2011]
Q9GMB0 608 Dolichyl-diphosphooligosa yes N/A 0.668 0.185 0.540 1e-31
Q4R4T0 607 Dolichyl-diphosphooligosa N/A N/A 0.644 0.179 0.559 1e-31
Q5RFB6 607 Dolichyl-diphosphooligosa yes N/A 0.644 0.179 0.559 2e-31
P04843 607 Dolichyl-diphosphooligosa yes N/A 0.644 0.179 0.559 2e-31
Q91YQ5 608 Dolichyl-diphosphooligosa yes N/A 0.668 0.185 0.524 3e-31
P07153 605 Dolichyl-diphosphooligosa yes N/A 0.668 0.186 0.524 1e-30
Q9ZUA0 464 Dolichyl-diphosphooligosa yes N/A 0.639 0.232 0.491 4e-24
Q0DJC5 615 Dolichyl-diphosphooligosa yes N/A 0.639 0.175 0.466 5e-24
B9FDT1 473 Dolichyl-diphosphooligosa no N/A 0.804 0.287 0.404 1e-22
Q54C27 460 Dolichyl-diphosphooligosa yes N/A 0.928 0.341 0.364 2e-20
>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1 Back     alignment and function desciption
 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 9/122 (7%)

Query: 51  WGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEV 110
             + N+ES+T +   T+ E  + YGP+ +VPPY++    +H ENNSPFL +T + R IEV
Sbjct: 178 LASRNVESYTKLGNPTRSEDLLDYGPFRDVPPYSQDTFKVHSENNSPFLTITSMTRVIEV 237

Query: 111 SHW------EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDE 161
           SHW      E++ LKH GA LKG FSRYDYQR    G   I+SFKTILPAAA D YYRDE
Sbjct: 238 SHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDE 297

Query: 162 IG 163
           IG
Sbjct: 298 IG 299




Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Sus scrofa (taxid: 9823)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 1EC: 9
>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1 Back     alignment and function description
>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1 Back     alignment and function description
>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1 Back     alignment and function description
>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2 SV=1 Back     alignment and function description
>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2 SV=1 Back     alignment and function description
>sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query169
242009823 446 Dolichyl-diphosphooligosaccharide--prote 0.928 0.352 0.445 2e-33
291240752 606 PREDICTED: ribophorin I-like [Saccogloss 0.644 0.179 0.579 2e-32
196005937 541 hypothetical protein TRIADDRAFT_56383 [T 0.715 0.223 0.526 3e-32
346469193 599 hypothetical protein [Amblyomma maculatu 0.745 0.210 0.550 4e-32
156393894 602 predicted protein [Nematostella vectensi 0.644 0.181 0.577 7e-32
449276665 521 Dolichyl-diphosphooligosaccharide--prote 0.745 0.241 0.517 9e-32
383848775 608 PREDICTED: dolichyl-diphosphooligosaccha 0.644 0.179 0.576 1e-31
115707196 603 PREDICTED: dolichyl-diphosphooligosaccha 0.644 0.180 0.581 1e-31
307198050 611 Dolichyl-diphosphooligosaccharide--prote 0.644 0.178 0.584 1e-31
326927952 539 PREDICTED: dolichyl-diphosphooligosaccha 0.644 0.202 0.576 2e-31
>gi|242009823|ref|XP_002425682.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor, putative [Pediculus humanus corporis] gi|212509575|gb|EEB12944.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 18/175 (10%)

Query: 3   TTQVEQTITYGPYENVPPY-----TKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIE 57
           T ++E  +T+    N+ PY      K    + Y  N+ F    + ++Q+     GT N+E
Sbjct: 119 TVEIETVLTH----NLKPYPAAITQKEKQLLLYTGNAYFYSPYKTLKQVTTVMLGTKNVE 174

Query: 58  SFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW---- 113
           +++ + PT+  +  + YGPY NV P++   + +HYENNSPF+ VT L R IEVSHW    
Sbjct: 175 NYSKIKPTSLSDTNVVYGPYSNVEPFSIEKMVVHYENNSPFVTVTNLERVIEVSHWGNIA 234

Query: 114 --EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDEIG 163
             E I ++H GA LK +FSRYDYQR+S  G   +KSFKTILPA+A+DAYYRDEIG
Sbjct: 235 IEETISMEHKGALLKNSFSRYDYQRESQSGLSSVKSFKTILPASATDAYYRDEIG 289




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291240752|ref|XP_002740264.1| PREDICTED: ribophorin I-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|196005937|ref|XP_002112835.1| hypothetical protein TRIADDRAFT_56383 [Trichoplax adhaerens] gi|190584876|gb|EDV24945.1| hypothetical protein TRIADDRAFT_56383 [Trichoplax adhaerens] Back     alignment and taxonomy information
>gi|346469193|gb|AEO34441.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|156393894|ref|XP_001636562.1| predicted protein [Nematostella vectensis] gi|156223666|gb|EDO44499.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|449276665|gb|EMC85097.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, partial [Columba livia] Back     alignment and taxonomy information
>gi|383848775|ref|XP_003700023.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|115707196|ref|XP_782614.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|307198050|gb|EFN79103.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|326927952|ref|XP_003210151.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Meleagris gallopavo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query169
UNIPROTKB|E1C0F1 601 RPN1 "Dolichyl-diphosphooligos 0.905 0.254 0.450 1.8e-31
UNIPROTKB|B7Z4L4 435 RPN1 "Dolichyl-diphosphooligos 0.644 0.250 0.559 3e-30
UNIPROTKB|P04843 607 RPN1 "Dolichyl-diphosphooligos 0.769 0.214 0.5 5e-30
UNIPROTKB|E2RQ08 607 RPN1 "Uncharacterized protein" 0.769 0.214 0.493 6.5e-30
ZFIN|ZDB-GENE-030131-4286 598 rpn1 "ribophorin I" [Danio rer 0.639 0.180 0.564 7.8e-30
MGI|MGI:98084 608 Rpn1 "ribophorin I" [Mus muscu 0.769 0.213 0.486 1.1e-29
UNIPROTKB|F1SPG2 608 RPN1 "Dolichyl-diphosphooligos 0.923 0.256 0.431 1.4e-29
UNIPROTKB|Q9GMB0 608 RPN1 "Dolichyl-diphosphooligos 0.923 0.256 0.431 1.4e-29
RGD|3594 605 Rpn1 "ribophorin I" [Rattus no 0.769 0.214 0.486 4.8e-29
UNIPROTKB|A3KN04 609 RPN1 "Uncharacterized protein" 0.769 0.213 0.479 8.1e-29
UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 351 (128.6 bits), Expect = 1.8e-31, P = 1.8e-31
 Identities = 78/173 (45%), Positives = 106/173 (61%)

Query:     6 VEQTITY--GPYENVPPYTKANITIHYENN----SPFLVVTRLVRQIEVSHWGTLNIESF 59
             VE   T+   PY      ++    + +E N    SP+   T+  R ++++   + N+ES+
Sbjct:   125 VEMVFTHVLQPYPTHITQSEKQFVV-FEGNHYFYSPYFTKTQTTR-VKLA---SRNVESY 179

Query:    60 TSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW------ 113
             T +   ++ E  I YGP++++PPY++  + +HYENNSPFL +T + R IEVSHW      
Sbjct:   180 TKLGNPSRTEDMIEYGPFKDIPPYSQDTLKVHYENNSPFLTITSMTRVIEVSHWGNIAVE 239

Query:   114 EHIHLKHDGAKLKGTFSRYDYQRDSAHGI---KSFKTILPAAASDAYYRDEIG 163
             E + LKH GA LKG FSRYDYQR    GI   KSFKTILPAAA D YYRDEIG
Sbjct:   240 ETVDLKHTGAVLKGPFSRYDYQRQPDSGISSVKSFKTILPAAAQDVYYRDEIG 292


GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
UNIPROTKB|B7Z4L4 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|3594 Rpn1 "ribophorin I" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A3KN04 RPN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5RFB6RPN1_PONAB2, ., 4, ., 1, ., 1, 1, 90.55930.64490.1795yesN/A
Q9GMB0RPN1_PIG2, ., 4, ., 1, ., 1, 1, 90.54090.66860.1858yesN/A
P07153RPN1_RAT2, ., 4, ., 1, ., 1, 1, 90.52450.66860.1867yesN/A
Q91YQ5RPN1_MOUSE2, ., 4, ., 1, ., 1, 1, 90.52450.66860.1858yesN/A
P04843RPN1_HUMAN2, ., 4, ., 1, ., 1, 1, 90.55930.64490.1795yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.119LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query169
pfam04597 429 pfam04597, Ribophorin_I, Ribophorin I 3e-41
>gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I Back     alignment and domain information
 Score =  142 bits (361), Expect = 3e-41
 Identities = 64/123 (52%), Positives = 79/123 (64%), Gaps = 13/123 (10%)

Query: 55  NIESFTSV--MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSH 112
           NI S+T    +P T+   T+TYGPYENVP ++   IT+HYENN P + VT L R IEVSH
Sbjct: 147 NILSYTKTPNLPPTRQGNTLTYGPYENVPAFSLEPITVHYENNKPLITVTNLERDIEVSH 206

Query: 113 W------EHIHLKHDGAKLKGTFSRYDYQRDS-----AHGIKSFKTILPAAASDAYYRDE 161
           W      E+  L ++GAKLKG FSR DYQ+ S     +  +KS KT LPA A+D YY DE
Sbjct: 207 WGNIAVEEYYELTNNGAKLKGGFSRVDYQKGSYSTRNSSALKSLKTPLPAGATDVYYTDE 266

Query: 162 IGK 164
           IG 
Sbjct: 267 IGN 269


Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 169
KOG2291|consensus 602 100.0
PF04597 432 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri 100.0
KOG2291|consensus 602 99.55
PF04597 432 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri 99.52
>KOG2291|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-50  Score=360.65  Aligned_cols=163  Identities=42%  Similarity=0.733  Sum_probs=155.6

Q ss_pred             CceeeeceEEEeeCCCCCCCCCc-----cEEEEEecC----cceEEEEEeeEEEEEEecCCcceeeeeecCCCceecceE
Q psy6410           2 PTTQVEQTITYGPYENVPPYTKA-----NITIHYENN----SPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTI   72 (169)
Q Consensus         2 ~~~~~~~~i~Ygp~~~v~p~~~~-----~~~v~y~~n----SPY~t~~~l~rq~~~~~~gs~~veeyt~~~~~~~~~~~l   72 (169)
                      |+++.+..|.++....+.|||.+     +|.|.|++|    |||.|++    |++.+++++.+||+||+.++.+++|++|
T Consensus       121 pge~vTl~V~~~~t~vl~P~Pe~I~QsE~Q~vv~~tn~~~~SpY~Tk~----Q~t~ikl~Ss~ies~T~~~~~k~~gn~l  196 (602)
T KOG2291|consen  121 PGEKVTLIVEAVLTHVLRPLPEEITQSEEQFVVYETNAYLLSPYDTKS----QSTTIKLPSSKIESYTTVEPSKRSGNEL  196 (602)
T ss_pred             CCceEEEEEEeecccCcccChhhhCcCceeeEEEeccccccCcccccc----eeEEEEcccccceeccccCcccccCcee
Confidence            67889999999999999999976     699999999    9999999    9999999999999999999999999999


Q ss_pred             EecccccCCCCCcccEEEEEecCCCeeEEEEEEEEEEeecc------ceeeeEEecCCcCCCcCcceeccccc----cCc
Q psy6410          73 TYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW------EHIHLKHDGAKLKGTFSRYDYQRDSA----HGI  142 (169)
Q Consensus        73 ~yGp~~~v~pfs~~~~~vhye~~~P~~~v~~L~R~ievSHW------e~~~l~n~GA~Lkg~FsR~d~~~~~~----~~~  142 (169)
                      +||||+|+++||..|+.||||||.||.++.+|+|+||||||      |+|+|+|+||+|||+|||+|||+++.    +++
T Consensus       197 ~yGPyeni~afs~~pl~VhYEnnaPf~~v~~L~R~IevSHWgnIqVeE~~~lth~gAkLkg~FSR~d~q~~~~~~g~sai  276 (602)
T KOG2291|consen  197 KYGPYENIPAFSQEPLVVHYENNAPFVTVENLEREIEVSHWGNIQVEENYELTHKGAKLKGPFSRLDYQKQRRTRGASAI  276 (602)
T ss_pred             eecCccccccccCCceEEEEecCCCcceeeeEEEEEEeecceeeEEEEEEEEEecceeccCCcchHhhhhcCCcCcchHH
Confidence            99999999999999999999999999999999999999999      99999999999999999999998753    344


Q ss_pred             cEEEEeCCCCCCCeEEEeccCeeecC
Q psy6410         143 KSFKTILPAAASDAYYRDEIGKRFIY  168 (169)
Q Consensus       143 ~~~~~~Lp~~a~d~yy~D~iGnvST~  168 (169)
                      +++.+.||++|+|+||||+|||||||
T Consensus       277 ~~l~~~LP~~A~dvYYrDeiGNISTS  302 (602)
T KOG2291|consen  277 NSLKTVLPARAKDVYYRDEIGNISTS  302 (602)
T ss_pred             HHHHhhCCCccCceeeecccCcEehh
Confidence            88999999999999999999999998



>PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 Back     alignment and domain information
>KOG2291|consensus Back     alignment and domain information
>PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00