Psyllid ID: psy6410
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 169 | ||||||
| 242009823 | 446 | Dolichyl-diphosphooligosaccharide--prote | 0.928 | 0.352 | 0.445 | 2e-33 | |
| 291240752 | 606 | PREDICTED: ribophorin I-like [Saccogloss | 0.644 | 0.179 | 0.579 | 2e-32 | |
| 196005937 | 541 | hypothetical protein TRIADDRAFT_56383 [T | 0.715 | 0.223 | 0.526 | 3e-32 | |
| 346469193 | 599 | hypothetical protein [Amblyomma maculatu | 0.745 | 0.210 | 0.550 | 4e-32 | |
| 156393894 | 602 | predicted protein [Nematostella vectensi | 0.644 | 0.181 | 0.577 | 7e-32 | |
| 449276665 | 521 | Dolichyl-diphosphooligosaccharide--prote | 0.745 | 0.241 | 0.517 | 9e-32 | |
| 383848775 | 608 | PREDICTED: dolichyl-diphosphooligosaccha | 0.644 | 0.179 | 0.576 | 1e-31 | |
| 115707196 | 603 | PREDICTED: dolichyl-diphosphooligosaccha | 0.644 | 0.180 | 0.581 | 1e-31 | |
| 307198050 | 611 | Dolichyl-diphosphooligosaccharide--prote | 0.644 | 0.178 | 0.584 | 1e-31 | |
| 326927952 | 539 | PREDICTED: dolichyl-diphosphooligosaccha | 0.644 | 0.202 | 0.576 | 2e-31 |
| >gi|242009823|ref|XP_002425682.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor, putative [Pediculus humanus corporis] gi|212509575|gb|EEB12944.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 18/175 (10%)
Query: 3 TTQVEQTITYGPYENVPPY-----TKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIE 57
T ++E +T+ N+ PY K + Y N+ F + ++Q+ GT N+E
Sbjct: 119 TVEIETVLTH----NLKPYPAAITQKEKQLLLYTGNAYFYSPYKTLKQVTTVMLGTKNVE 174
Query: 58 SFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW---- 113
+++ + PT+ + + YGPY NV P++ + +HYENNSPF+ VT L R IEVSHW
Sbjct: 175 NYSKIKPTSLSDTNVVYGPYSNVEPFSIEKMVVHYENNSPFVTVTNLERVIEVSHWGNIA 234
Query: 114 --EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDEIG 163
E I ++H GA LK +FSRYDYQR+S G +KSFKTILPA+A+DAYYRDEIG
Sbjct: 235 IEETISMEHKGALLKNSFSRYDYQRESQSGLSSVKSFKTILPASATDAYYRDEIG 289
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|291240752|ref|XP_002740264.1| PREDICTED: ribophorin I-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
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| >gi|196005937|ref|XP_002112835.1| hypothetical protein TRIADDRAFT_56383 [Trichoplax adhaerens] gi|190584876|gb|EDV24945.1| hypothetical protein TRIADDRAFT_56383 [Trichoplax adhaerens] | Back alignment and taxonomy information |
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| >gi|346469193|gb|AEO34441.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
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| >gi|156393894|ref|XP_001636562.1| predicted protein [Nematostella vectensis] gi|156223666|gb|EDO44499.1| predicted protein [Nematostella vectensis] | Back alignment and taxonomy information |
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| >gi|449276665|gb|EMC85097.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, partial [Columba livia] | Back alignment and taxonomy information |
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| >gi|383848775|ref|XP_003700023.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|115707196|ref|XP_782614.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Strongylocentrotus purpuratus] | Back alignment and taxonomy information |
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| >gi|307198050|gb|EFN79103.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|326927952|ref|XP_003210151.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Meleagris gallopavo] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 169 | ||||||
| UNIPROTKB|E1C0F1 | 601 | RPN1 "Dolichyl-diphosphooligos | 0.905 | 0.254 | 0.450 | 1.8e-31 | |
| UNIPROTKB|B7Z4L4 | 435 | RPN1 "Dolichyl-diphosphooligos | 0.644 | 0.250 | 0.559 | 3e-30 | |
| UNIPROTKB|P04843 | 607 | RPN1 "Dolichyl-diphosphooligos | 0.769 | 0.214 | 0.5 | 5e-30 | |
| UNIPROTKB|E2RQ08 | 607 | RPN1 "Uncharacterized protein" | 0.769 | 0.214 | 0.493 | 6.5e-30 | |
| ZFIN|ZDB-GENE-030131-4286 | 598 | rpn1 "ribophorin I" [Danio rer | 0.639 | 0.180 | 0.564 | 7.8e-30 | |
| MGI|MGI:98084 | 608 | Rpn1 "ribophorin I" [Mus muscu | 0.769 | 0.213 | 0.486 | 1.1e-29 | |
| UNIPROTKB|F1SPG2 | 608 | RPN1 "Dolichyl-diphosphooligos | 0.923 | 0.256 | 0.431 | 1.4e-29 | |
| UNIPROTKB|Q9GMB0 | 608 | RPN1 "Dolichyl-diphosphooligos | 0.923 | 0.256 | 0.431 | 1.4e-29 | |
| RGD|3594 | 605 | Rpn1 "ribophorin I" [Rattus no | 0.769 | 0.214 | 0.486 | 4.8e-29 | |
| UNIPROTKB|A3KN04 | 609 | RPN1 "Uncharacterized protein" | 0.769 | 0.213 | 0.479 | 8.1e-29 |
| UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Score = 351 (128.6 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 78/173 (45%), Positives = 106/173 (61%)
Query: 6 VEQTITY--GPYENVPPYTKANITIHYENN----SPFLVVTRLVRQIEVSHWGTLNIESF 59
VE T+ PY ++ + +E N SP+ T+ R ++++ + N+ES+
Sbjct: 125 VEMVFTHVLQPYPTHITQSEKQFVV-FEGNHYFYSPYFTKTQTTR-VKLA---SRNVESY 179
Query: 60 TSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW------ 113
T + ++ E I YGP++++PPY++ + +HYENNSPFL +T + R IEVSHW
Sbjct: 180 TKLGNPSRTEDMIEYGPFKDIPPYSQDTLKVHYENNSPFLTITSMTRVIEVSHWGNIAVE 239
Query: 114 EHIHLKHDGAKLKGTFSRYDYQRDSAHGI---KSFKTILPAAASDAYYRDEIG 163
E + LKH GA LKG FSRYDYQR GI KSFKTILPAAA D YYRDEIG
Sbjct: 240 ETVDLKHTGAVLKGPFSRYDYQRQPDSGISSVKSFKTILPAAAQDVYYRDEIG 292
|
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| UNIPROTKB|B7Z4L4 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| RGD|3594 Rpn1 "ribophorin I" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A3KN04 RPN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 169 | |||
| pfam04597 | 429 | pfam04597, Ribophorin_I, Ribophorin I | 3e-41 |
| >gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 3e-41
Identities = 64/123 (52%), Positives = 79/123 (64%), Gaps = 13/123 (10%)
Query: 55 NIESFTSV--MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSH 112
NI S+T +P T+ T+TYGPYENVP ++ IT+HYENN P + VT L R IEVSH
Sbjct: 147 NILSYTKTPNLPPTRQGNTLTYGPYENVPAFSLEPITVHYENNKPLITVTNLERDIEVSH 206
Query: 113 W------EHIHLKHDGAKLKGTFSRYDYQRDS-----AHGIKSFKTILPAAASDAYYRDE 161
W E+ L ++GAKLKG FSR DYQ+ S + +KS KT LPA A+D YY DE
Sbjct: 207 WGNIAVEEYYELTNNGAKLKGGFSRVDYQKGSYSTRNSSALKSLKTPLPAGATDVYYTDE 266
Query: 162 IGK 164
IG
Sbjct: 267 IGN 269
|
Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 169 | |||
| KOG2291|consensus | 602 | 100.0 | ||
| PF04597 | 432 | Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri | 100.0 | |
| KOG2291|consensus | 602 | 99.55 | ||
| PF04597 | 432 | Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri | 99.52 |
| >KOG2291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=360.65 Aligned_cols=163 Identities=42% Similarity=0.733 Sum_probs=155.6
Q ss_pred CceeeeceEEEeeCCCCCCCCCc-----cEEEEEecC----cceEEEEEeeEEEEEEecCCcceeeeeecCCCceecceE
Q psy6410 2 PTTQVEQTITYGPYENVPPYTKA-----NITIHYENN----SPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTI 72 (169)
Q Consensus 2 ~~~~~~~~i~Ygp~~~v~p~~~~-----~~~v~y~~n----SPY~t~~~l~rq~~~~~~gs~~veeyt~~~~~~~~~~~l 72 (169)
|+++.+..|.++....+.|||.+ +|.|.|++| |||.|++ |++.+++++.+||+||+.++.+++|++|
T Consensus 121 pge~vTl~V~~~~t~vl~P~Pe~I~QsE~Q~vv~~tn~~~~SpY~Tk~----Q~t~ikl~Ss~ies~T~~~~~k~~gn~l 196 (602)
T KOG2291|consen 121 PGEKVTLIVEAVLTHVLRPLPEEITQSEEQFVVYETNAYLLSPYDTKS----QSTTIKLPSSKIESYTTVEPSKRSGNEL 196 (602)
T ss_pred CCceEEEEEEeecccCcccChhhhCcCceeeEEEeccccccCcccccc----eeEEEEcccccceeccccCcccccCcee
Confidence 67889999999999999999976 699999999 9999999 9999999999999999999999999999
Q ss_pred EecccccCCCCCcccEEEEEecCCCeeEEEEEEEEEEeecc------ceeeeEEecCCcCCCcCcceeccccc----cCc
Q psy6410 73 TYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW------EHIHLKHDGAKLKGTFSRYDYQRDSA----HGI 142 (169)
Q Consensus 73 ~yGp~~~v~pfs~~~~~vhye~~~P~~~v~~L~R~ievSHW------e~~~l~n~GA~Lkg~FsR~d~~~~~~----~~~ 142 (169)
+||||+|+++||..|+.||||||.||.++.+|+|+|||||| |+|+|+|+||+|||+|||+|||+++. +++
T Consensus 197 ~yGPyeni~afs~~pl~VhYEnnaPf~~v~~L~R~IevSHWgnIqVeE~~~lth~gAkLkg~FSR~d~q~~~~~~g~sai 276 (602)
T KOG2291|consen 197 KYGPYENIPAFSQEPLVVHYENNAPFVTVENLEREIEVSHWGNIQVEENYELTHKGAKLKGPFSRLDYQKQRRTRGASAI 276 (602)
T ss_pred eecCccccccccCCceEEEEecCCCcceeeeEEEEEEeecceeeEEEEEEEEEecceeccCCcchHhhhhcCCcCcchHH
Confidence 99999999999999999999999999999999999999999 99999999999999999999998753 344
Q ss_pred cEEEEeCCCCCCCeEEEeccCeeecC
Q psy6410 143 KSFKTILPAAASDAYYRDEIGKRFIY 168 (169)
Q Consensus 143 ~~~~~~Lp~~a~d~yy~D~iGnvST~ 168 (169)
+++.+.||++|+|+||||+|||||||
T Consensus 277 ~~l~~~LP~~A~dvYYrDeiGNISTS 302 (602)
T KOG2291|consen 277 NSLKTVLPARAKDVYYRDEIGNISTS 302 (602)
T ss_pred HHHHhhCCCccCceeeecccCcEehh
Confidence 88999999999999999999999998
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|
| >PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 | Back alignment and domain information |
|---|
| >KOG2291|consensus | Back alignment and domain information |
|---|
| >PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00