Psyllid ID: psy6425
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 68 | ||||||
| 321464273 | 595 | hypothetical protein DAPPUDRAFT_226428 [ | 0.764 | 0.087 | 0.634 | 9e-14 | |
| 115707196 | 603 | PREDICTED: dolichyl-diphosphooligosaccha | 0.764 | 0.086 | 0.615 | 9e-13 | |
| 91095077 | 459 | PREDICTED: similar to olygosaccharyltran | 0.897 | 0.132 | 0.524 | 2e-12 | |
| 169805304 | 601 | ribophorin I [Penaeus monodon] | 0.764 | 0.086 | 0.596 | 4e-12 | |
| 405960099 | 602 | Dolichyl-diphosphooligosaccharide--prote | 0.764 | 0.086 | 0.615 | 5e-12 | |
| 389612736 | 295 | ribophorin, partial [Papilio xuthus] | 0.764 | 0.176 | 0.615 | 7e-12 | |
| 346469193 | 599 | hypothetical protein [Amblyomma maculatu | 0.75 | 0.085 | 0.627 | 7e-12 | |
| 52078488 | 201 | ribophorin [Oxyuranus scutellatus scutel | 0.735 | 0.248 | 0.6 | 7e-12 | |
| 291240752 | 606 | PREDICTED: ribophorin I-like [Saccogloss | 0.764 | 0.085 | 0.592 | 8e-12 | |
| 383848775 | 608 | PREDICTED: dolichyl-diphosphooligosaccha | 0.764 | 0.085 | 0.576 | 1e-11 |
| >gi|321464273|gb|EFX75282.1| hypothetical protein DAPPUDRAFT_226428 [Daphnia pulex] | Back alignment and taxonomy information |
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Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGN 53
P++Q + TITYGPYEN+ P T+ +I IH+ENN+PFL V L+R IEVSHWGN
Sbjct: 181 PSSQSDSTITYGPYENIAPLTEVDIVIHFENNAPFLSVANLLRHIEVSHWGN 232
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Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|115707196|ref|XP_782614.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Strongylocentrotus purpuratus] | Back alignment and taxonomy information |
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| >gi|91095077|ref|XP_972905.1| PREDICTED: similar to olygosaccharyltransferase alpha subunit [Tribolium castaneum] gi|270014775|gb|EFA11223.1| hypothetical protein TcasGA2_TC005188 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|169805304|gb|ACA83751.1| ribophorin I [Penaeus monodon] | Back alignment and taxonomy information |
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| >gi|405960099|gb|EKC26046.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Crassostrea gigas] | Back alignment and taxonomy information |
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| >gi|389612736|dbj|BAM19784.1| ribophorin, partial [Papilio xuthus] | Back alignment and taxonomy information |
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| >gi|346469193|gb|AEO34441.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
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| >gi|52078488|gb|AAU25924.1| ribophorin [Oxyuranus scutellatus scutellatus] | Back alignment and taxonomy information |
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| >gi|291240752|ref|XP_002740264.1| PREDICTED: ribophorin I-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
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| >gi|383848775|ref|XP_003700023.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Megachile rotundata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 68 | ||||||
| UNIPROTKB|E1C0F1 | 601 | RPN1 "Dolichyl-diphosphooligos | 0.735 | 0.083 | 0.54 | 2.3e-12 | |
| ZFIN|ZDB-GENE-030131-4286 | 598 | rpn1 "ribophorin I" [Danio rer | 0.735 | 0.083 | 0.54 | 4.8e-12 | |
| UNIPROTKB|B7Z4L4 | 435 | RPN1 "Dolichyl-diphosphooligos | 0.735 | 0.114 | 0.54 | 1.5e-11 | |
| TAIR|locus:2065378 | 464 | AT2G01720 "AT2G01720" [Arabido | 0.985 | 0.144 | 0.462 | 1.7e-11 | |
| UNIPROTKB|P04843 | 607 | RPN1 "Dolichyl-diphosphooligos | 0.735 | 0.082 | 0.54 | 2.8e-11 | |
| UNIPROTKB|E2RQ08 | 607 | RPN1 "Uncharacterized protein" | 0.735 | 0.082 | 0.52 | 3.6e-11 | |
| UNIPROTKB|F1SPG2 | 608 | RPN1 "Dolichyl-diphosphooligos | 0.735 | 0.082 | 0.54 | 3.6e-11 | |
| UNIPROTKB|Q9GMB0 | 608 | RPN1 "Dolichyl-diphosphooligos | 0.735 | 0.082 | 0.54 | 3.6e-11 | |
| MGI|MGI:98084 | 608 | Rpn1 "ribophorin I" [Mus muscu | 0.691 | 0.077 | 0.531 | 5.8e-11 | |
| RGD|3594 | 605 | Rpn1 "ribophorin I" [Rattus no | 0.691 | 0.077 | 0.531 | 7.4e-11 |
| UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Score = 175 (66.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGN 53
++ E I YGP++++PPY++ + +HYENNSPFL +T + R IEVSHWGN
Sbjct: 186 SRTEDMIEYGPFKDIPPYSQDTLKVHYENNSPFLTITSMTRVIEVSHWGN 235
|
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| ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B7Z4L4 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065378 AT2G01720 "AT2G01720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|3594 Rpn1 "ribophorin I" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 68 | |||
| pfam04597 | 429 | pfam04597, Ribophorin_I, Ribophorin I | 2e-20 |
| >gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I | Back alignment and domain information |
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Score = 81.9 bits (203), Expect = 2e-20
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGN 53
P T+ T+TYGPYENVP ++ IT+HYENN P + VT L R IEVSHWGN
Sbjct: 158 PPTRQGNTLTYGPYENVPAFSLEPITVHYENNKPLITVTNLERDIEVSHWGN 209
|
Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 68 | |||
| PF04597 | 432 | Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri | 99.95 | |
| KOG2291|consensus | 602 | 99.95 |
| >PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=181.89 Aligned_cols=67 Identities=49% Similarity=0.900 Sum_probs=64.9
Q ss_pred CceeecCeEEEcccCcCCCCCcccEEEEEecCCCceEEeEEEEEEEEeccccceeeeEEEeEEcccC
Q psy6425 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDNDSIESGFIR 68 (68)
Q Consensus 2 ~~~~~g~~i~yGP~~~v~p~t~~p~~VhYe~n~P~~~v~~L~R~IeVSHWgni~veE~y~l~n~~~~ 68 (68)
|.+++|++|+||||+|++||+.+|++||||||.||++|++|+|+|||||||||||||+|+|+|.+|+
T Consensus 161 ~~~~~~~~i~yGP~~~v~p~~~~~~~vhye~n~P~~~v~~l~R~IeVSHWgni~veE~y~l~N~GA~ 227 (432)
T PF04597_consen 161 PPKKKGNTITYGPYENVPPFSSQPLSVHYENNAPFLTVTSLERDIEVSHWGNIAVEEYYELRNDGAK 227 (432)
T ss_pred CceecCCeEEeccccccCCCCcccEEEEEECCCCceEEEEEEEEEEEcCCccEEEEEEEEEEEcCcc
Confidence 6789999999999999999999999999999999999999999999999999999999999999874
|
4.1.119 from EC). OST catalyses the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are thought to be responsible for OST catalytic activity []. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function []. Most family members are predicted to have a transmembrane helix at the C terminus of this region.; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0006486 protein glycosylation, 0005783 endoplasmic reticulum, 0016021 integral to membrane |
| >KOG2291|consensus | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00