Psyllid ID: psy6481

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Secondary Structure (PSIPRED)
ccccEEEEEEEEEEcccccccccccEEEEEEcccccccEEEEEEEccccEEEEEEEEHHEEEEEEEEEccccccccccHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEEEccccccccHHHHHHHcHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MAAIESYQLYAyqenknvpvnsslwknigklealplpmacTLTQIVLFCTKLMVPEINVISQILLLFErkfapggnqthdlALRRqvcytptiv
Flexible Loop (DISEMBL)
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPggnqthdlalrrqvcytptiv
Low Complexity Region (SEG)
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Disordered region (IsUnstruct)
*****SYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYT****
Disordered Region (DISOPRED)
**AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Disordered Region (DISEMBL)
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Disordered Region (DISPRO)
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQILLLFERKFAPGGNQTHDLALRRQVCYTPTIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q6VMQ6	1270	Activating transcription	yes	N/A	0.468	0.034	0.6	3e-08
Q5ZIE8	1085	Activating transcription	yes	N/A	0.468	0.040	0.577	3e-08
Q7TT18	1306	Activating transcription	yes	N/A	0.468	0.033	0.6	3e-08
A0JME2	815	Activating transcription	yes	N/A	0.478	0.055	0.530	4e-08
Q5U623	682	Activating transcription	no	N/A	0.446	0.061	0.533	5e-07
Q3UL97	452	Activating transcription	no	N/A	0.414	0.086	0.511	5e-05

>sp|Q6VMQ6|MCAF1_HUMAN Activating transcription factor 7-interacting protein 1 OS=Homo sapiens GN=ATF7IP PE=1 SV=3

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1191 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1234

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing SETDB1. Required to stimulate histone methyltransferase activity of SETDB1 and facilitate the conversion of dimethylated to trimethylated H3 'Lys-9' (H3K9me3). The complex formed with MBD1 and SETDB1 represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3). Facilitates telomerase TERT and TERC gene expression by SP1 in cancer cells.
Homo sapiens (taxid: 9606)

>sp|Q5ZIE8|MCAF1_CHICK Activating transcription factor 7-interacting protein 1 OS=Gallus gallus GN=ATF7IP PE=2 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A+++SY LYAY E+ +  + S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1007 ASVDSYHLYAYHEDPSATMPSQ-WKKIGEVKALPLPMACTLTQFV 1050

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing histone methyltransferase activity. May belong to a complex that represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3).

Gallus gallus (taxid: 9031)

>sp|Q7TT18|MCAF1_MOUSE Activating transcription factor 7-interacting protein 1 OS=Mus musculus GN=Atf7ip PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1227 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1270

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing SETDB1. Required to stimulate histone methyltransferase activity of SETDB1 and facilitate the conversion of dimethylated to trimethylated H3 'Lys-9' (H3K9me3). The complex formed with MBD1 and SETDB1 represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3). May have ATPase activity.

Mus musculus (taxid: 10090)

>sp|A0JME2|MCAF1_DANRE Activating transcription factor 7-interacting protein 1 OS=Danio rerio GN=atf7ip PE=1 SV=2

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 4/49 (8%)

Query: 2   AAIESYQLYAYQENKNVPVNSS----LWKNIGKLEALPLPMACTLTQIV 46
           AA+++Y LYAY ++    V+ +    LWK IG+++ALPLPMACTLTQ V
Sbjct: 729 AAVDTYHLYAYHQDHQSSVSGASAQMLWKKIGEVKALPLPMACTLTQFV 777

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing histone methyltransferase activity. May belong to a complex that represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3).

Danio rerio (taxid: 7955)

>sp|Q5U623|MCAF2_HUMAN Activating transcription factor 7-interacting protein 2 OS=Homo sapiens GN=ATF7IP2 PE=2 SV=2

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
           A +ESY L+   EN N   N  +WK IG+++ALPLPMACTL+Q +
Sbjct: 606 APVESYHLFLCHENSN---NKLIWKKIGEIKALPLPMACTLSQFL 647

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing SETDB1. The complex formed with MBD1 and SETDB1 represses transcription and probably couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3) activity.

Homo sapiens (taxid: 9606)

>sp|Q3UL97|MCAF2_MOUSE Activating transcription factor 7-interacting protein 2 OS=Mus musculus GN=Atf7ip2 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 4/43 (9%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
           A +ESY L+ Y EN +       WK I +++ALPLPMACTL+Q
Sbjct: 377 APVESYHLFLYYENSD----HLTWKKIAEIKALPLPMACTLSQ 415

Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing SETDB1. The complex formed with MBD1 and SETDB1 represses transcription and probably couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3) activity.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
350410644	1374	PREDICTED: hypothetical protein LOC10074	0.457	0.031	0.720	4e-10
383862985	1289	PREDICTED: uncharacterized protein LOC10	0.457	0.033	0.697	7e-10
328782674	1322	PREDICTED: hypothetical protein LOC10057	0.457	0.032	0.697	9e-10
380015296	1106	PREDICTED: uncharacterized protein LOC10	0.457	0.038	0.697	1e-09
332031515	1052	Activating transcription factor 7-intera	0.457	0.040	0.697	6e-09
242004622	813	ubiquitin-protein ligase BRE1, putative	0.446	0.051	0.697	7e-09
307173815	1069	Activating transcription factor 7-intera	0.457	0.040	0.697	1e-08
345486050	1341	PREDICTED: hypothetical protein LOC10067	0.457	0.032	0.651	2e-08
307205402	753	Activating transcription factor 7-intera	0.457	0.057	0.674	2e-08
357606742	893	putative ubiquitin-protein ligase BRE1 [	0.446	0.047	0.651	3e-08

>gi|350410644|ref|XP_003489101.1| PREDICTED: hypothetical protein LOC100743311 [Bombus impatiens]

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 34/43 (79%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   VP N+SLWK +G + ALPLPMACTLTQ
Sbjct: 1301 ADIVSYQLYAYQEIAGVPPNTSLWKKVGDVRALPLPMACTLTQ 1343

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862985|ref|XP_003706963.1| PREDICTED: uncharacterized protein LOC100881659 [Megachile rotundata]

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   +P N+SLWK +G + ALPLPMACTLTQ
Sbjct: 1216 ADIASYQLYAYQEITGIPPNTSLWKKVGDVRALPLPMACTLTQ 1258

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782674|ref|XP_003250178.1| PREDICTED: hypothetical protein LOC100577401 [Apis mellifera]

 Score = 67.8 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   +P N+SLWK +G + ALPLPMACTLTQ
Sbjct: 1249 ADIVSYQLYAYQEIAGIPPNTSLWKKVGDVRALPLPMACTLTQ 1291

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015296|ref|XP_003691641.1| PREDICTED: uncharacterized protein LOC100863680 [Apis florea]

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   +P N+SLWK +G + ALPLPMACTLTQ
Sbjct: 1033 ADIVSYQLYAYQEIAGIPPNTSLWKKVGDVRALPLPMACTLTQ 1075

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031515|gb|EGI70987.1| Activating transcription factor 7-interacting protein 1 [Acromyrmex echinatior]

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   V  N+SLWK +G + ALPLPMACTLTQ
Sbjct: 979  ADIASYQLYAYQEVAGVNPNTSLWKKVGDVRALPLPMACTLTQ 1021

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004622|ref|XP_002423179.1| ubiquitin-protein ligase BRE1, putative [Pediculus humanus corporis] gi|212506144|gb|EEB10441.1| ubiquitin-protein ligase BRE1, putative [Pediculus humanus corporis]

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
           AAI SYQLYAYQE  + P  +SLWK +G ++ALPLPMACTLTQ
Sbjct: 739 AAISSYQLYAYQEGSSPPA-TSLWKKVGDVKALPLPMACTLTQ 780

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173815|gb|EFN64593.1| Activating transcription factor 7-interacting protein 1 [Camponotus floridanus]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE   V  N+SLWK +G + ALPLPMACTLTQ
Sbjct: 996  ADIASYQLYAYQEVTGVNPNTSLWKKVGDVRALPLPMACTLTQ 1038

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486050|ref|XP_003425394.1| PREDICTED: hypothetical protein LOC100678585 [Nasonia vitripennis]

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/43 (65%), Positives = 32/43 (74%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
            A I SYQLYAYQE      N++LWK +G + ALPLPMACTLTQ
Sbjct: 1268 AEIVSYQLYAYQEVAGTNPNAALWKKVGDVRALPLPMACTLTQ 1310

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205402|gb|EFN83743.1| Activating transcription factor 7-interacting protein 1 [Harpegnathos saltator]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
           A I SYQLYAYQE   V  ++SLWK +G + ALPLPMACTLTQ
Sbjct: 680 ADIASYQLYAYQEVTGVTPSTSLWKKVGDVRALPLPMACTLTQ 722

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357606742|gb|EHJ65194.1| putative ubiquitin-protein ligase BRE1 [Danaus plexippus]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)

Query: 4   IESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
           I S+QLYAYQE  + P N++LWK IG ++ALPLPMACTLTQ +
Sbjct: 809 IASFQLYAYQETTSPP-NTALWKKIGDVKALPLPMACTLTQFM 850

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
UNIPROTKB|F6Q7P1	1199	F6Q7P1 "Uncharacterized protei	0.468	0.036	0.6	4.2e-08
UNIPROTKB|Q6VMQ6	1270	ATF7IP "Activating transcripti	0.468	0.034	0.6	4.5e-08
UNIPROTKB|I3LGZ6	1275	ATF7IP "Uncharacterized protei	0.468	0.034	0.6	4.5e-08
MGI|MGI:1858965	1306	Atf7ip "activating transcripti	0.468	0.033	0.6	4.6e-08
UNIPROTKB|F1NLP9	1085	ATF7IP "Activating transcripti	0.468	0.040	0.577	4.7e-08
UNIPROTKB|Q5ZIE8	1085	ATF7IP "Activating transcripti	0.468	0.040	0.577	4.7e-08
ZFIN|ZDB-GENE-061103-178	858	atf7ip "activating transcripti	0.478	0.052	0.530	1.2e-07
UNIPROTKB|Q5U623	682	ATF7IP2 "Activating transcript	0.446	0.061	0.533	5e-07
UNIPROTKB|E1B7J2	688	ATF7IP2 "Uncharacterized prote	0.446	0.061	0.511	1.7e-06
MGI|MGI:1922579	452	Atf7ip2 "activating transcript	0.414	0.086	0.511	1.5e-05

UNIPROTKB|F6Q7P1 F6Q7P1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1120 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1163

GO:0045898 "regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0006306 "DNA methylation" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|Q6VMQ6 ATF7IP "Activating transcription factor 7-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 139 (54.0 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1191 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1234

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0006306 "DNA methylation" evidence=IDA

GO:0045898 "regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|I3LGZ6 ATF7IP "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 139 (54.0 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1196 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1239

GO:0045898 "regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0006306 "DNA methylation" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

MGI|MGI:1858965 Atf7ip "activating transcription factor 7 interacting protein" [Mus musculus (taxid:10090)]

 Score = 139 (54.0 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1227 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1270

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003714 "transcription corepressor activity" evidence=IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005667 "transcription factor complex" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=IDA

GO:0006306 "DNA methylation" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016887 "ATPase activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045898 "regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=ISO

UNIPROTKB|F1NLP9 ATF7IP "Activating transcription factor 7-interacting protein 1" [Gallus gallus (taxid:9031)]

 Score = 138 (53.6 bits), Expect = 4.7e-08, P = 4.7e-08
 Identities = 26/45 (57%), Positives = 35/45 (77%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A+++SY LYAY E+ +  + S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1007 ASVDSYHLYAYHEDPSATMPSQ-WKKIGEVKALPLPMACTLTQFV 1050

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0006306 "DNA methylation" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045898 "regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA

UNIPROTKB|Q5ZIE8 ATF7IP "Activating transcription factor 7-interacting protein 1" [Gallus gallus (taxid:9031)]

 Score = 138 (53.6 bits), Expect = 4.7e-08, P = 4.7e-08
 Identities = 26/45 (57%), Positives = 35/45 (77%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A+++SY LYAY E+ +  + S  WK IG+++ALPLPMACTLTQ V
Sbjct:  1007 ASVDSYHLYAYHEDPSATMPSQ-WKKIGEVKALPLPMACTLTQFV 1050

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-061103-178 atf7ip "activating transcription factor 7 interacting protein" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 26/49 (53%), Positives = 36/49 (73%)

Query:     2 AAIESYQLYAYQENKNVPVNSS----LWKNIGKLEALPLPMACTLTQIV 46
             AA+++Y LYAY ++    V+ +    LWK IG+++ALPLPMACTLTQ V
Sbjct:   772 AAVDTYHLYAYHQDHQSSVSGASAQMLWKKIGEVKALPLPMACTLTQFV 820

GO:0003674 "molecular_function" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q5U623 ATF7IP2 "Activating transcription factor 7-interacting protein 2" [Homo sapiens (taxid:9606)]

 Score = 126 (49.4 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A +ESY L+   EN N   N  +WK IG+++ALPLPMACTL+Q +
Sbjct:   606 APVESYHLFLCHENSN---NKLIWKKIGEIKALPLPMACTLSQFL 647

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E1B7J2 ATF7IP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 121 (47.7 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
             A +ESY L+   EN   P N  +WK IG+++ALPLPMACTL++ +
Sbjct:   612 APVESYHLFLCHEN---PSNKLIWKKIGEIKALPLPMACTLSKFL 653

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

MGI|MGI:1922579 Atf7ip2 "activating transcription factor 7 interacting protein 2" [Mus musculus (taxid:10090)]

 Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query:     2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
             A +ESY L+ Y EN +       WK I +++ALPLPMACTL+Q
Sbjct:   377 APVESYHLFLYYENSD----HLTWKKIAEIKALPLPMACTLSQ 415

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7TT18	MCAF1_MOUSE	No assigned EC number	0.6	0.4680	0.0336	yes	N/A
Q6VMQ6	MCAF1_HUMAN	No assigned EC number	0.6	0.4680	0.0346	yes	N/A
Q5ZIE8	MCAF1_CHICK	No assigned EC number	0.5777	0.4680	0.0405	yes	N/A
A0JME2	MCAF1_DANRE	No assigned EC number	0.5306	0.4787	0.0552	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	94
PLN02638	1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	0.003

>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 28  IGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQI--LLLFERKFAPG 74
           I  + ++PL + CTL  + L   K ++P+I+ I+ I  + LF   FA G
Sbjct: 857 IYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATG 905

Length = 1079

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	92.46

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=92.46  E-value=0.44  Score=27.79  Aligned_cols=50  Identities=18%  Similarity=0.246  Sum_probs=36.3

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ..+..|+|+...++..     ..|..+ .+..-  .+..++++...+ .|.|.|+|++-
T Consensus        28 ~~~~~y~v~~~~~~~~-----~~~~~~-~~~~~--~~~~~i~~L~p~t~Y~~~v~a~~~   78 (85)
T PF00041_consen   28 GPITGYRVEYRSVNST-----SDWQEV-TVPGN--ETSYTITGLQPGTTYEFRVRAVNS   78 (85)
T ss_dssp             SSESEEEEEEEETTSS-----SEEEEE-EEETT--SSEEEEESCCTTSEEEEEEEEEET
T ss_pred             CCeeEEEEEEEecccc-----eeeeee-eeeee--eeeeeeccCCCCCEEEEEEEEEeC
Confidence            3678999999877652     245555 33333  558999999997 58999999874

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
2crm_A	120	Fibronectin type-III domain containing protein 3A;	94.74
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	94.08
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	94.04
2crz_A	110	Fibronectin type-III domain containing protein 3A;	93.92
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	93.77
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	93.46
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	93.09
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	92.96
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	92.88
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	92.66
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	92.57
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	91.58
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	91.45
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	90.0
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	89.83
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	89.8
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	89.47
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	89.34
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	88.85
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	88.84
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	88.73
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	88.57
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	88.55
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	88.01
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	87.98
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	87.79
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	87.75
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	87.54
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	87.53
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	85.49
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	85.31
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	85.18
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	85.18
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	84.41
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	82.72
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	82.69
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	82.33
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	82.21
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	82.19
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	81.74
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	80.97
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	80.88
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	80.35
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	80.22
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	80.15

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=94.74  E-value=0.054  Score=33.18  Aligned_cols=49  Identities=16%  Similarity=0.118  Sum_probs=36.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhHH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINVI   60 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDvh   60 (94)
                      +|..|+|+......     ...|+.+....    -..|+++....+. |.|-|||++..
T Consensus        49 ~i~~Y~v~~~~~~~-----~~~~~~~~~~~----~~~~~v~~L~p~t~Y~frV~A~n~~   98 (120)
T 2crm_A           49 TINKYVVEMAEGSN-----GNKWEMIYSGA----TREHLCDRLNPGCFYRLRVYCISDG   98 (120)
T ss_dssp             CCCEEEEEEEESSS-----SCCCEEEECSS----CSEEEECSCCTTSCEEEEEEEEETT
T ss_pred             eeeEEEEEEccCCC-----CcCCEEEEecc----ccEEEECCCCCCCEEEEEEEEEcCC
Confidence            68899998654432     24699886533    4568999999974 89999999753

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.08  E-value=0.1  Score=30.69  Aligned_cols=49  Identities=8%  Similarity=0.182  Sum_probs=34.4

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      ++|.+|.|+......     ...|+.+.....    ..++|+....+. |.|-|||++.
T Consensus        34 ~~i~~Y~v~~~~~~~-----~~~~~~~~~~~~----~~~~i~~L~p~t~Y~~~V~A~n~   83 (106)
T 2dju_A           34 EPVTYYGIQYRAAGT-----EGPFQEVDGVAT----TRYSIGGLSPFSEYAFRVLAVNS   83 (106)
T ss_dssp             SCCSEEEEEEEETTC-----CSCCCCBCCCCS----SEEEEESCCTTCEEEEEEEEECS
T ss_pred             CCceEEEEEEEECCC-----CCCeEEccCCCc----cEEEEeCCCCCcEEEEEEEEEeC
Confidence            467899997544332     245888754332    458999998875 8899999874

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=94.04  E-value=0.11  Score=31.50  Aligned_cols=49  Identities=18%  Similarity=0.187  Sum_probs=35.1

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      +|.+|.|+.....      ...|..+.....  --..++++....+. |.|-|||++.
T Consensus        39 ~i~~Y~v~~~~~~------~~~w~~~~~~~~--~~~~~~v~~L~p~t~Y~frV~A~n~   88 (111)
T 1x5y_A           39 GIDGYLVEYCLEG------SEEWVPANKEPV--ERCGFTVKDLPTGARILFRVVGVNI   88 (111)
T ss_dssp             CCCEEEEEEEETT------CCCCEESSSSCB--SSSEEEEECCCTTCCEEEEEEEEET
T ss_pred             cccEEEEEEEECC------CCceEEccccCC--cccEEEECCCCCCCEEEEEEEEEcC
Confidence            4889999865433      246988765421  13578999998874 8999999875

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=93.92  E-value=0.092  Score=31.76  Aligned_cols=48  Identities=10%  Similarity=0.119  Sum_probs=35.2

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|+|......      ...|+.+....    -..|+++....+ .|.|-|||++.
T Consensus        39 ~~i~~Y~v~~~~~~------~~~~~~~~~~~----~~~~~v~~L~p~t~Y~frV~A~n~   87 (110)
T 2crz_A           39 SPISCYSVEMSPIE------KDEPREVYQGS----EVECTVSSLLPGKTYSFRLRAANK   87 (110)
T ss_dssp             SCCCEEEEEEECTT------SCCCEEEEEES----CSEEEEESCCTTCEEEECCEEECS
T ss_pred             ceeEEEEEEEEeCC------CCceEEEEeCC----cEEEEECCcCCCCEEEEEEEEEcC
Confidence            36789999864432      24598886443    467899999997 58999999964

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=93.77  E-value=0.069  Score=34.11  Aligned_cols=46  Identities=13%  Similarity=0.128  Sum_probs=31.3

Q ss_pred             ceeEEEEEEeecCCCCCCcccceeece-eeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           4 IESYQLYAYQENKNVPVNSSLWKNIGK-LEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         4 V~sYeLYayqE~~~~~~~ts~WKKIG~-VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +.+|.||--...      ...|+.|+. +..    ..++.+....| .|||.|+|||-
T Consensus        32 ~~~Y~VyR~~~~------~~~~~~i~~~~~~----tsy~d~~l~~g~~Y~Y~V~Avn~   79 (103)
T 3mpc_A           32 ANSYNVKRSTKS------GGPYTTIATNITS----TNYTDTGVATGTKYYYVVSAVSN   79 (103)
T ss_dssp             CSEEEEEEESST------TCCCEEEEEEECS----SEEEETTCCTTCCCEEEEEEEET
T ss_pred             CCEEEEEEecCC------CCCcEEEeecCCC----CEEEECCCCCCCEEEEEEEEEeC
Confidence            568998764322      235888886 432    35666666676 58999999983

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.46  E-value=0.15  Score=30.70  Aligned_cols=49  Identities=18%  Similarity=0.099  Sum_probs=35.1

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|+.....      ...|+.+.....  --..++++....+ .|.|-|||++.
T Consensus        38 ~i~~Y~v~~~~~~------~~~w~~~~~~~~--~~~~~~v~~L~p~t~Y~frV~A~n~   87 (110)
T 2yuw_A           38 GLDGYVLEYCFEG------TEDWIVANKDLI--DKTKFTITGLPTDAKIFVRVKAVNA   87 (110)
T ss_dssp             CEEEEEEEEEETT------CSSEEECCSSCC--CSSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CccEEEEEEEECC------CccceEeccccC--ccCEEEECCCCCCCEEEEEEEEEcC
Confidence            5889999866543      246988854321  2356889998887 58999999875

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=93.09  E-value=0.11  Score=31.46  Aligned_cols=49  Identities=14%  Similarity=0.075  Sum_probs=34.4

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|..|.|.. ++...    ...|+.+.....    ..|+++....+. |.|-|||++.
T Consensus        46 ~~i~~Y~v~~-~~~~~----~~~~~~~~~~~~----~~~~v~~L~p~t~Y~frV~A~n~   95 (118)
T 1x3d_A           46 SKIQNFVLEW-DEGKG----NGEFCQCYMGSQ----KQFKITKLSPAMGCKFRLSARND   95 (118)
T ss_dssp             SCEEEEEEEE-CTTTS----SSCCEEEEEESC----SEEEEESCCTTCEEEEECCEEES
T ss_pred             CcceEEEEEE-ecCCC----CCCeEEeeccCC----cEEEeCCCCCCCEEEEEEEEEEC
Confidence            3578888864 33321    157988765543    678999999974 8899999864

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=92.96  E-value=0.19  Score=30.19  Aligned_cols=48  Identities=23%  Similarity=0.038  Sum_probs=33.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|.......     ...|+.+....    -..++++....+ .|.|-|||++.
T Consensus        38 ~i~~Y~v~~~~~~~-----~~~~~~~~~~~----~~~~~v~~L~p~t~Y~frV~A~n~   86 (109)
T 1x5x_A           38 EGISYILEMEEETS-----GYGFKPKYDGE----DLAYTVKNLRRSTKYKFKVIAYNS   86 (109)
T ss_dssp             SSCEEEEEECCSSS-----SCCCEEEEEES----CSEEEEESCCSSCEEEEEEEEECS
T ss_pred             cccEEEEEEecCCC-----CcceEEeEeCC----ccEEEECCCCCCCEEEEEEEEEeC
Confidence            57889997543321     24587654332    467999999997 58999999874

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=92.88  E-value=0.15  Score=30.65  Aligned_cols=50  Identities=18%  Similarity=0.258  Sum_probs=35.1

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|.+|+|+......     ...|+.+..- .  --..++++....+. |.|-|||++.
T Consensus        44 ~~i~~Y~v~~~~~~~-----~~~~~~~~~~-~--~~~~~~i~~L~p~t~Y~frV~A~n~   94 (117)
T 1uem_A           44 LPASAYIIEAFSQSV-----SNSWQTVANH-V--KTTLYTVRGLRPNTIYLFMVRAINP   94 (117)
T ss_dssp             SCCCEEEEEEEETTT-----EEEEEEEEEE-E--CSSEEEECSCCTTCEEEEEEEEEET
T ss_pred             cCceEEEEEEEECCC-----CCceeEcccc-c--CcCEEEECCCCCCCEEEEEEEEECC
Confidence            357889998665431     4579887431 1  23478999999874 8999999874

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=92.66  E-value=0.16  Score=32.09  Aligned_cols=50  Identities=16%  Similarity=0.100  Sum_probs=35.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhHH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINVI   60 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDvh   60 (94)
                      +|.+|.|......      ...|..+.....  --..|+++....+ .|.|-|||++..
T Consensus        41 ~i~~Y~Ve~~~~~------~~~w~~~~~~~~--~~~~~~v~~L~p~t~Y~frV~A~N~~   91 (112)
T 1bpv_A           41 KITSYIVEKRDLP------NGRWLKANFSNI--LENEFTVSGLTEDAAYEFRVIAKNAA   91 (112)
T ss_dssp             CCSCCEEEEEETT------SCCCEECCCSCC--CSSEEEECSCCSSCCEEEEEEEECTT
T ss_pred             cccEEEEEEEECC------CCceEEeecccC--ccCEEEECCCCCCCEEEEEEEEEECC
Confidence            5889999865433      245998764322  2356899999997 489999999854

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=92.57  E-value=0.16  Score=29.76  Aligned_cols=41  Identities=10%  Similarity=0.203  Sum_probs=28.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+||.  +.          ..++.+..    ..++++....+ .|+|.|||+|.
T Consensus        32 ~i~~Y~v~~--~~----------~~~~~~~~----~~~~~~~L~~~t~Y~~~V~A~n~   73 (88)
T 1k85_A           32 GVTGYDVYN--GT----------ALATTVTG----TTATISGLAADTSYTFTVKAKDA   73 (88)
T ss_dssp             SEEEEEEEE--SS----------SEEEEESS----SEEEECCCCSSCEEEEEEEEEET
T ss_pred             CccEEEEEE--CC----------EEEeecCC----CEEEeCCCCCCCEEEEEEEEEeC
Confidence            467899982  11          13455543    46888888887 58999999985

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=91.58  E-value=0.21  Score=31.10  Aligned_cols=54  Identities=17%  Similarity=0.271  Sum_probs=37.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.|.......   .....|+.+..+...+--..++++....+ .|.|-|+|++.
T Consensus        47 ~i~~Y~v~~~~~~~---~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~  101 (124)
T 1wis_A           47 SISRWLVEAQVGVV---GEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNI  101 (124)
T ss_dssp             CCSEEEEEECBSCC---STTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECS
T ss_pred             cccEEEEEEEECCC---CCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEEC
Confidence            57889886443211   12456998877644455678999999997 58999999974

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=91.45  E-value=0.57  Score=28.59  Aligned_cols=51  Identities=18%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.|.......     ...|..+...-. .--..++++....+ .|.|-|||++.
T Consensus        47 ~i~~Y~v~~~~~~~-----~~~w~~~~~~~~-~~~~~~~v~~L~p~t~Y~frV~A~n~   98 (121)
T 1x4z_A           47 PIQSFRVEYKKLKK-----VGDWILATSAIP-PSRLSVEITGLEKGISYKFRVRALNM   98 (121)
T ss_dssp             CCCEEEEEEEESSS-----CCCCEEEEEEEC-TTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred             cceEEEEEEEECCC-----CCceEEeecccC-CCcCEEEECCCCCCCEEEEEEEEEcC
Confidence            58899997655432     346988755411 12357899999987 48999999974

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=90.00  E-value=0.49  Score=29.04  Aligned_cols=51  Identities=10%  Similarity=0.202  Sum_probs=33.8

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|..|.|+......    ....|+.+..+..-.   ..+++....+ .|.|-|||++.
T Consensus        45 ~~i~~Y~v~~~~~~~----~~~~w~~~~~~~~~~---~~~i~~L~p~t~Y~frV~A~n~   96 (127)
T 1uey_A           45 SPITKFIIEYEDAMH----KPGLWHHQTEVSGTQ---TTAQLNLSPYVNYSFRVMAVNS   96 (127)
T ss_dssp             SCEEEEEEEEEBTTT----CTTCEEEEEEEESSC---CEEEECCCTTCEECCEEEEEES
T ss_pred             CCceEEEEEEEECCC----CCCccEEEeeeCCCc---eEEEecCCCCCEEEEEEEEEeC
Confidence            468899998543321    245799887664322   2257777776 48999999864

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=89.83  E-value=0.96  Score=26.97  Aligned_cols=53  Identities=17%  Similarity=0.207  Sum_probs=33.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+........   ...|+.+ .++.-.--..++|+....+ .|.|-|||++.
T Consensus        47 ~i~~Y~v~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  100 (122)
T 1va9_A           47 VIRGYQIGYRENSPGS---NGQYSIV-EMKATGDSEVYTLDNLKKFAQYGVVVQAFNR  100 (122)
T ss_dssp             CCCEEEEEEEESSTTS---CCSCBCC-BCCCCSSEEEEEEESCCSSCCEEEEEEEEET
T ss_pred             cEeEEEEEEEECCCCC---CcceEEE-EEecCCceeEEEeCCCCCCCEEEEEEEEEcC
Confidence            5889999876654321   1223322 2222222378899999997 58999999874

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=89.80  E-value=0.58  Score=29.39  Aligned_cols=47  Identities=15%  Similarity=0.184  Sum_probs=35.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ++.+|+|+...+..      ..|+.+.....    ..++++....+ .|.|.|||++.
T Consensus       133 ~i~~Y~v~~~~~~~------~~~~~~~~~~~----~~~~~~~L~p~t~Y~~~V~A~n~  180 (197)
T 3lpw_A          133 RILGYIVEMQTKGS------DKWATCATVKV----TEATITGLIQGEEYSFRVSAQNE  180 (197)
T ss_dssp             CCCEEEEEEEETTC------SCCEEEEEESS----SEEEECCCCTTCEEEEEEEEEET
T ss_pred             cccEEEEEEEeCCC------CceEEeecccc----cEEEeCCcCCCCEEEEEEEEEeC
Confidence            57899999876543      34888766653    45899999997 58999999874

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=89.47  E-value=0.44  Score=29.29  Aligned_cols=49  Identities=22%  Similarity=0.213  Sum_probs=34.1

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|.+|.|......      ...|+.+...   .--..|+++....+. |.|-|||++.
T Consensus        47 ~~i~~Y~v~~~~~~------~~~w~~~~~~---~~~~~~~v~~L~p~t~Y~frV~A~n~   96 (120)
T 2yux_A           47 AAITGYTIQKADKK------SMEWFTVIEH---YHRTSATITELVIGNEYYFRVFSENM   96 (120)
T ss_dssp             SCCCCCCEEEEETT------TCCCEEEESS---CCSSCCEECCCCSSEEEEEEECCCSS
T ss_pred             CCceEEEEEEEECC------CCceEEeeec---CCcCEEEECCCCCCCEEEEEEEEeeC
Confidence            35788998765432      2459887531   124568899988875 8999999975

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.34  E-value=0.64  Score=27.76  Aligned_cols=49  Identities=10%  Similarity=0.123  Sum_probs=32.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|+...+..      ..|+.+..+..  --..++|+....+ .|.|-|||++.
T Consensus        47 ~i~~Y~v~~~~~~~------~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n~   96 (119)
T 2ed7_A           47 NIQTFTVFFSREGD------NRERALNTTQP--GSLQLTVGNLKPEAMYTFRVVAYNE   96 (119)
T ss_dssp             CEEEEEEEEEESSC------CCCEEEECCCT--TCCEEEECSCCSSSEEEECCEEEES
T ss_pred             cEEEEEEEEEeCCC------CcceeeEeecC--CceEEEeCCCCCCCEEEEEEEEEcC
Confidence            57889998654432      23655433222  2467899999997 48999999864

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=88.85  E-value=0.47  Score=29.55  Aligned_cols=51  Identities=10%  Similarity=0.089  Sum_probs=32.1

Q ss_pred             cceeEEEEEEeecCCCCCCccccee-eceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKN-IGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKK-IG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|+. ++..     ...|.. ...++...--..++|+....+ .|.|-|+|++.
T Consensus        37 pI~~Y~v~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~   89 (122)
T 2e3v_A           37 PILKYKAEW-RAVG-----EEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNG   89 (122)
T ss_dssp             CEEEEEEEE-EETT-----CCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEET
T ss_pred             cceEEEEEE-EECC-----CCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeC
Confidence            488999984 4443     234621 111221122467899999997 58999999874

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=88.84  E-value=0.97  Score=26.89  Aligned_cols=46  Identities=9%  Similarity=0.212  Sum_probs=33.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+......      ..|+.+ .+.    -..++|+....+ .|.|-|||++.
T Consensus        39 ~i~~Y~v~~~~~~~------~~~~~~-~~~----~~~~~l~~L~p~t~Y~~~V~A~n~   85 (108)
T 2dm4_A           39 LIREYIVEYSRSGS------KMWASQ-RAA----SNFTEIKNLLVNTLYTVRVAAVTS   85 (108)
T ss_dssp             CEEEEEEEEEETTC------SCCEEE-EES----SSEEEECSCCSSCEEEEEEEEEES
T ss_pred             cEEEEEEEEEECCC------CCeEEe-cCC----ccEEEeCCCCCCCEEEEEEEEECC
Confidence            47889998655432      458876 222    237899999997 58999999864

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.73  E-value=0.99  Score=26.81  Aligned_cols=51  Identities=12%  Similarity=0.113  Sum_probs=34.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|+|+.......   ....|..+ .+.  .--..++|+....+ .|.|-|||++.
T Consensus        40 ~i~~Y~v~~~~~~~~---~~~~~~~~-~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~   91 (114)
T 2ede_A           40 KITAYILFYTLDKNI---PIDDWIME-TIS--GDRLTHQIMDLNLDTMYYFRIQARNS   91 (114)
T ss_dssp             CCSEEEEEEESCSSS---CTTTSEEE-EEE--TTCCEEEECSCCSSCEEEEEEEEECS
T ss_pred             ceeEEEEEEEeCCCC---CccceEEE-EEC--CCceEEEEcCCCCCCEEEEEEEEEeC
Confidence            578999987654431   23457654 222  23357899999997 48999999874

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=88.57  E-value=0.82  Score=27.45  Aligned_cols=49  Identities=14%  Similarity=0.259  Sum_probs=32.9

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceee-ceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNI-GKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKI-G~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|.....+       ..|+.+ ..+..-  -..++++....+ .|.|-|||++.
T Consensus        48 ~~i~~Y~v~~~~~~-------~~~~~~~~~~~~~--~~~~~v~~L~p~t~Y~frV~A~n~   98 (121)
T 1wf5_A           48 SPLIRYILEMSENN-------APWTVLLASVDPK--ATSVTVKGLVPARSYQFRLCAVND   98 (121)
T ss_dssp             SCEEEEEEEEECTT-------CCCEEEESSCCTT--CCEEEEESCCTTCEEEEEEEEEES
T ss_pred             CcceEEEEEEEcCC-------CCceEeEcccCCC--ccEEEECCcCCCCEEEEEEEEEcC
Confidence            35778988754322       458876 333222  246899999997 58999999864

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.55  E-value=1.3  Score=26.60  Aligned_cols=49  Identities=12%  Similarity=0.034  Sum_probs=32.8

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+.....+.   ....|..+ ..+.    ..++|+....+ .|.|-|||++.
T Consensus        37 ~i~~Y~v~~~~~~~~---~~~~~~~~-~~~~----~~~~i~~L~p~t~Y~~~V~A~n~   86 (109)
T 2e7h_A           37 AVLDYEVKYHEKGAE---GPSSVRFL-KTSE----NRAELRGLKRGASYLVQVRARSE   86 (109)
T ss_dssp             CCCEEEEEEEETTCC---STTTSEEE-EESS----SEEEEESCCTTSCEEEEEEEECS
T ss_pred             cEeEEEEEEEECCCC---CCceeEEE-ccCC----CEEEECCCCCCCeEEEEEEEEeC
Confidence            478999986654421   12345544 2322    37899999997 49999999863

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.01  E-value=0.7  Score=28.34  Aligned_cols=48  Identities=15%  Similarity=0.149  Sum_probs=33.0

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|.....+      ...|+.+...    --..++++....+ .|.|-|||++.
T Consensus        39 ~~i~~Y~v~~~~~~------~~~~~~~~~~----~~~~~~v~~L~p~t~Y~frV~A~n~   87 (110)
T 2db8_A           39 VPADGYILELDDGN------GGQFREVYVG----KETMCTVDGLHFNSTYNARVKAFNK   87 (110)
T ss_dssp             SCCSEEEEEECCSS------SSCCEEEEEE----SCSCEEEECCCSSSCCEEEEEEECS
T ss_pred             CCccEEEEEEEeCC------CCceEEEEeC----CcCEEEECCCCCCCEEEEEEEEEeC
Confidence            36788998743322      2459876432    2356899999987 48999999863

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.98  E-value=1.3  Score=26.70  Aligned_cols=50  Identities=14%  Similarity=0.176  Sum_probs=33.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+.......    ...|+.+ .+..-  -..++|+....+ .|.|-|||++.
T Consensus        46 ~i~~Y~v~~~~~~~~----~~~~~~~-~~~~~--~~~~~i~~L~p~t~Y~~~V~A~n~   96 (119)
T 2ee2_A           46 IVESYQIRYWAAHDK----EEAANRV-QVTSQ--EYSARLENLLPDTQYFIEVGACNS   96 (119)
T ss_dssp             TCCEEEEEEEESSSC----GGGCEEE-EEETT--CSEEEECSCCTTCEEEEEEEEECS
T ss_pred             ccceEEEEEEECCCc----ccCcEEE-EcCCC--EeEEEECCCCCCCEEEEEEEEEcC
Confidence            578999996654421    2335544 33332  257899999997 58999999864

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.79  E-value=1.3  Score=26.58  Aligned_cols=49  Identities=6%  Similarity=0.017  Sum_probs=33.1

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|+|+....+.      ..|+.+.....  --..++|+....+ .|.|-|||++.
T Consensus        46 ~i~~Y~v~~~~~~~------~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n~   95 (118)
T 2yrz_A           46 PLQGYSVEYQLLNG------GELHRLNIPNP--AQTSVVVEDLLPNHSYVFRVRAQSQ   95 (118)
T ss_dssp             CEEEEEEEEEBSSS------CCEEEEEESCT--TCCEEEEESCCTTCEEEEEEEEEES
T ss_pred             CccEEEEEEEECCC------CceEEEEcCCC--CcCEEEeCCCCCCCEEEEEEEEEcC
Confidence            47899998654332      34776643321  1356889999987 58999999864

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=87.75  E-value=1.4  Score=25.79  Aligned_cols=48  Identities=13%  Similarity=0.024  Sum_probs=33.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|.|+....+      ...|+.+ .+.  +--..++|+....+ .|.|.|||++.
T Consensus        36 ~i~~Y~v~~~~~~------~~~~~~~-~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~   84 (107)
T 2dn7_A           36 ELLGYRLQYCRAD------EARPNTI-DFG--KDDQHFTVTGLHKGTTYIFRLAAKNR   84 (107)
T ss_dssp             CCCEEEEEEEETT------CSSCEEE-EEE--TTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             ceeEEEEEEEECC------CCCCEEE-EeC--CCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            5789999876443      2357765 232  23357899999997 58999999864

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=87.54  E-value=2  Score=25.70  Aligned_cols=54  Identities=17%  Similarity=0.197  Sum_probs=33.5

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeec--eeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIG--KLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG--~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+........   ...|+...  .+.--.--..++|+....+ .|.|.|||++.
T Consensus        46 ~i~gY~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  102 (125)
T 1uen_A           46 HLQGYRIYYWKTQSSS---KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG  102 (125)
T ss_dssp             CEEEEEEEEEEESCCC---CSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEEEEEEES
T ss_pred             eEeEEEEEEEECCCCc---ccccccccceEEEecCCccEEEeCCCCCCCEEEEEEEEecC
Confidence            4789999976655322   33454211  1111122357899999987 58999999863

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=87.53  E-value=1.1  Score=26.76  Aligned_cols=49  Identities=12%  Similarity=0.028  Sum_probs=33.5

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|+|+......      ..|+....+..  --..++|+....+ .|.|-|||++.
T Consensus        48 ~i~~Y~v~~~~~~~------~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n~   97 (120)
T 1x5f_A           48 DNLTYSVFYTKEGI------ARERVENTSHP--GEMQVTIQNLMPATVYIFRVMAQNK   97 (120)
T ss_dssp             CSSEEEEEEEETTC------CCCEEEECSST--TCSEEEECSCCTTCEEEEEEEEECS
T ss_pred             cEEEEEEEEEECCC------CCceEEEeccC--CccEEEeCCCCCCCEEEEEEEEECC
Confidence            57889998755432      23655433332  2456899999997 58999999874

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=85.49  E-value=1.9  Score=27.81  Aligned_cols=51  Identities=6%  Similarity=0.039  Sum_probs=34.9

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|.+|+|+......     ...|+.+... .. --..++|+....+. |.|.|||++.
T Consensus       145 ~~i~~Y~v~~~~~~~-----~~~~~~~~~~-~~-~~~~~~i~~L~p~t~Y~~~V~A~n~  196 (214)
T 2ibg_A          145 HLITGYYAYYRPSSS-----AGEYFKATIE-GA-HARSFKIAPLETATMYEFKLQSFSA  196 (214)
T ss_dssp             GGCCEEEEEEEETTC-----CSCCEEEEEE-CT-TCCEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCcceEEEEEEECCC-----CcceEEeecc-CC-cceEEEeCCCCCCCEEEEEEEEEcC
Confidence            357899998665442     1458877432 21 12478999999974 8999999864

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=85.31  E-value=1.7  Score=26.14  Aligned_cols=46  Identities=9%  Similarity=-0.051  Sum_probs=30.3

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|......       +.|+.+-....    ..++|+....+ .|.|-|||++.
T Consensus        37 ~i~~Y~v~~~~~~-------~~~~~~~~~~~----~~~~v~~L~p~t~Y~frV~A~n~   83 (106)
T 1x4x_A           37 DVTEYRLEWGGVE-------GSMQICYCGPG----LSYEIKGLSPATTYYCRVQALSV   83 (106)
T ss_dssp             CCCEEEEEEESST-------TSCCEEEEESC----SEEEEESCCSSCEEEEEEEEECS
T ss_pred             cceEEEEEEEcCC-------CceEEEEeCCc----ceEEEcCCCCCCEEEEEEEEEcC
Confidence            6888999764322       12544322222    36889999986 58999999874

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=85.18  E-value=1.6  Score=27.26  Aligned_cols=48  Identities=13%  Similarity=0.053  Sum_probs=33.4

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ++.+|.|+ |++..     ...|+.+..-   .--..++++....+ .|.|.|+|++.
T Consensus        36 ~i~~Y~v~-~~~~~-----~~~~~~~~~~---~~~~~~~~~~L~p~t~Y~~~V~a~~~   84 (197)
T 3lpw_A           36 KIKNYIVE-KREST-----RKAYSTVATN---CHKTSWKVDQLQEGCSYYFRVLAENE   84 (197)
T ss_dssp             CCCEEEEE-EEETT-----CSSCEEEEEE---ECSSEEEECCCCTTCEEEEEEEEEET
T ss_pred             cccEEEEE-EEECC-----CCccEEeecC---CCccEEEEcCCCCCCEEEEEEEEEcC
Confidence            47899999 44442     2458877431   12356889999987 58999999874

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.18  E-value=2  Score=25.26  Aligned_cols=46  Identities=17%  Similarity=0.288  Sum_probs=32.7

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|..|.|+......      ..|+.+ .+.    -..++|+....+ .|.|-|||++.
T Consensus        37 ~i~~Y~v~~~~~~~------~~~~~~-~~~----~~~~~i~~L~p~t~Y~~~V~A~n~   83 (106)
T 2ed8_A           37 PVQGYRLFCTEVST------GKEQNI-EVD----GLSYKLEGLKKFTEYSLRFLAYNR   83 (106)
T ss_dssp             CCCEEEEEEEETTT------CCEEEE-EEC----SSCEEEESCCTTCEEEEEEEEECS
T ss_pred             CeeEEEEEEEECCC------CceEEE-eCC----ccEEEECCCCCCCEEEEEEEEEeC
Confidence            57899997644332      247665 333    367899999997 58999999874

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=84.41  E-value=2.4  Score=27.35  Aligned_cols=52  Identities=8%  Similarity=0.107  Sum_probs=34.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeecc---------CcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEAL---------PLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKAL---------PLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|.+|.|+......     .+.|+.+.+--..         .--..++++....+ .|.|-|+|++.
T Consensus        31 ~i~~Y~v~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   92 (214)
T 2ibg_A           31 PIVIFKVQYRMVGK-----RKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYS   92 (214)
T ss_dssp             CEEEEEEEEEESSS-----SCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEEEET
T ss_pred             CceEEEEEEEECCC-----CCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEEEec
Confidence            58899998665432     3468887641110         11246788888887 48899999964

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=82.72  E-value=2.5  Score=25.07  Aligned_cols=46  Identities=15%  Similarity=0.286  Sum_probs=32.3

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+......      ..|+.+ .+.    -..++|+....+ .|.|-|||++.
T Consensus        47 ~i~~Y~v~~~~~~~------~~~~~~-~~~----~~~~~i~~L~p~t~Y~~~V~A~n~   93 (116)
T 1x5g_A           47 EIQNYKLYYMEKGT------DKEQDV-DVS----SHSYTINGLKKYTEYSFRVVAYNK   93 (116)
T ss_dssp             CCSEEEEEEEETTC------CCCCCE-EEC----SSEEEECSCCTTCEEEEEEEEECS
T ss_pred             cccEEEEEEEECCC------CccEEE-ecC----CceEEEcCCCCCCEEEEEEEEEcC
Confidence            57899998765442      236544 222    357899999987 58999999864

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=82.69  E-value=1.4  Score=26.10  Aligned_cols=47  Identities=11%  Similarity=-0.009  Sum_probs=31.4

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+......      ..|+.+....    -..++|+....+ .|.|-|||++.
T Consensus        45 ~i~~Y~v~~~~~~~------~~~~~~~~~~----~~~~~i~~L~p~t~Y~~~V~A~n~   92 (115)
T 1x5z_A           45 TIANYELVYKDGEH------GEEQRITIEP----GTSYRLQGLKPNSLYYFRLAARSP   92 (115)
T ss_dssp             CCCEEEECBEESSS------CCCBCCEECS----SSEEEEECCCTTCEEEECEEEECS
T ss_pred             CccEEEEEEEeCCC------CCceEEecCC----CcEEEECCCCCCCeEEEEEEEECC
Confidence            47789998665432      2354332211    267899999997 58999999864

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=82.33  E-value=2.3  Score=25.67  Aligned_cols=51  Identities=14%  Similarity=0.159  Sum_probs=32.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|.|+.......   ....|++. .+..-.  ..++|+....+ .|.|.|+|++.
T Consensus        40 ~i~gY~v~y~~~~~~---~~~~~~~~-~~~~~~--~~~~i~~L~p~t~Y~~~V~A~n~   91 (114)
T 1x4y_A           40 PIHGFYIYYRPTDSD---NDSDYKKD-MVEGDR--YWHSISHLQPETSYDIKMQCFNE   91 (114)
T ss_dssp             CCCEEEEEECCTTSC---SGGGCCCE-EEETTC--CEEEECSCCTTCEEEEEEEEECT
T ss_pred             ccceEEEEEEECCCC---CCcceeeE-ecCCcE--eEEEcCCCCCCCEEEEEEEEEcC
Confidence            588999986543321   12345433 344322  46899999997 58999999764

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=82.21  E-value=3.6  Score=27.40  Aligned_cols=54  Identities=11%  Similarity=-0.063  Sum_probs=36.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+....+... .....|+.+-....-  -..++|+....+ .|.|-|||++.
T Consensus       128 ~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~A~n~  182 (234)
T 3f7q_A          128 EITAYEVCYGLVNDDN-RPIGPMKKVLVDNPK--NRMLLIENLRESQPYRYTVKARNG  182 (234)
T ss_dssp             CCCEEEEEEEEBCTTS-CBSSCCEECCCSCTT--CCEEEEECCCTTCCEEEEEEEEET
T ss_pred             ceeEEEEEEEECCCCC-CccCcceEEEecCCc--ceEEEeCCCCCCCeEEEEEEEECC
Confidence            5789999877755432 223456665433221  246899999997 48999999863

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=82.19  E-value=2.9  Score=27.06  Aligned_cols=51  Identities=14%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .|..|+|.....+      ...|+.+.......--..++|+....+. |.|-|||.+.
T Consensus       135 ~i~~Y~v~y~~~~------~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  186 (215)
T 1bqu_A          135 IILKYNIQYRTKD------ASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKE  186 (215)
T ss_dssp             SCEEEEEEEEETT------CSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEET
T ss_pred             ceEEEEEEEccCC------CCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccC
Confidence            4678999754433      2459887532111122468899999875 8899999874

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.74  E-value=4.2  Score=24.48  Aligned_cols=51  Identities=8%  Similarity=0.007  Sum_probs=33.1

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|+|+.......    ...|..+..+..  --..++|+....+ .|.|-|||++.
T Consensus        50 ~i~~Y~v~~~~~~~~----~~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n~  101 (134)
T 2edx_A           50 VITQYSVAYEAVDGE----DRGRHVVDGISR--EHSSWDLVGLEKWTEYRVWVRAHTD  101 (134)
T ss_dssp             CEEEEEEEEEESSSS----CCCCEEECCCBT--TCSEEEEESCCTTCEEEEEEEEEET
T ss_pred             ceeEEEEEEEECCCC----CcccEEEEeeCC--CccEEEeCCCCCCCEEEEEEEEEcC
Confidence            478999986665431    223444433322  1256899999987 58999999875

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=80.97  E-value=3.2  Score=26.89  Aligned_cols=49  Identities=20%  Similarity=0.097  Sum_probs=34.3

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|+... .      .+.|.+...+..  --..++|+....+ .|.|-|||++.
T Consensus       138 ~~i~~Y~v~~~~-~------~~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n~  187 (209)
T 2vkw_A          138 SPIRHYLVRYRA-L------SSEWKPEIRLPS--GSDHVMLKSLDWNAEYEVYVVAENQ  187 (209)
T ss_dssp             SCCCEEEEEEEE-T------TSCCCCCEEECT--TCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCceEEEEEEC-C------CCCCceeeecCC--CccEEEecCCCCCCEEEEEEEEEeC
Confidence            368899998765 2      234776555532  1246899999997 48999999864

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=80.88  E-value=3.6  Score=26.51  Aligned_cols=50  Identities=14%  Similarity=0.096  Sum_probs=34.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      +|.+|.|+......     ...|+.+....  +--..++|+....+. |.|-|+|++.
T Consensus       136 ~i~~Y~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~  186 (205)
T 1cfb_A          136 PNFHYYVSWKRDIP-----AAAWENNNIFD--WRQNNIVIADQPTFVKYLIKVVAIND  186 (205)
T ss_dssp             SSCEEEEEEEESST-----TCCCEEEEECC--TTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred             CceEEEEEEEECCC-----CCCcEEEEecC--CCccEEEEcCCCCCcEEEEEEEEEcC
Confidence            57899998655443     24588874322  122578999999875 8899999864

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=80.35  E-value=3.1  Score=24.42  Aligned_cols=48  Identities=15%  Similarity=0.207  Sum_probs=31.9

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      +|.+|+|+......    ....|..+   ..  --..++|+....+. |.|-|||++.
T Consensus        40 ~i~~Y~v~~~~~~~----~~~~~~~~---~~--~~~~~~i~~L~p~t~Y~~~V~A~n~   88 (111)
T 1x5l_A           40 IILEYEIKYYEKDK----EMQSYSTL---KA--VTTRATVSGLKPGTRYVFQVRARTS   88 (111)
T ss_dssp             CCCEEEEEEEESSS----CCSSCEEE---EE--SSSEEEECSCCTTCEEEECEEEEET
T ss_pred             EEEEEEEEEEECCC----CceeEEEe---cC--CCCEEEEcCCCCCCEEEEEEEEEeC
Confidence            57899998766542    12234433   11  13478999999975 8999999863

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=80.22  E-value=2.9  Score=27.11  Aligned_cols=46  Identities=9%  Similarity=-0.053  Sum_probs=33.1

Q ss_pred             ceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           4 IESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         4 V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      |..|+|-  .+..    ....|..+..-..    ..|+++....+ .|.|-|||++.
T Consensus        51 I~~Y~ve--~~~~----~~~~~~~v~~~~~----t~~~v~gL~p~t~Y~frV~A~n~   97 (120)
T 1wfu_A           51 WLRFSIE--EEDP----KMHSYGVIYTGYA----TRHVVEGLEPRTLYKFRLKVTSP   97 (120)
T ss_dssp             CCEEEEE--EECT----TTCCEEEEEEESC----SEEEEESCCTTCEEEEEEEEECS
T ss_pred             eEEEEEE--EecC----CCCceEEEecCCc----cEEEECCCCCCCEEEEEEEEECC
Confidence            7899998  3332    2457988755432    35999999997 58999999864

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=80.15  E-value=4.6  Score=23.60  Aligned_cols=50  Identities=18%  Similarity=0.140  Sum_probs=32.3

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|.....+.     ...|+.+ .+.  .--..++|+....+ .|.|.|||++.
T Consensus        27 ~~i~~Y~v~y~~~~~-----~~~~~~~-~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (98)
T 3teu_A           27 ATITGYRITYTPSNG-----PGEPKEL-TVP--PSSTSVTITGLTPGVEYVVSVYALKD   77 (98)
T ss_dssp             SCCSEEEEEEEETTS-----CSCCEEE-EEC--TTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CcccEEEEEEEECCC-----CCceEEE-EcC--CCcCEEEecCCCCCCEEEEEEEEEeC
Confidence            357899997654332     1235443 232  22357899999987 58899999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	94
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	93.68
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	93.67
d2crza1	97	Fibronectin type-III domain containing protein 3a,	93.64
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	93.47
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	93.39
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	92.15
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	90.4
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	89.82
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	89.6
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	88.62
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	88.25
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	88.1
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	87.59
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	87.35
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	86.89
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	86.68
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	86.2
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	85.57
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	85.49
d2crma1	107	Fibronectin type-III domain containing protein 3a,	85.47
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	85.4
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	85.21
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	84.83
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	84.8
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	84.22
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	84.22
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	82.66
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	82.05
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	82.02
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	81.72
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	81.43
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	81.02
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	80.88
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	80.03

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.026  Score=32.99  Aligned_cols=53  Identities=13%  Similarity=0.080  Sum_probs=34.5

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ++|..|.|....... . .....|..   +........|+|+....+ .|.|-|||++.
T Consensus        31 ~~I~~Y~v~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~   84 (101)
T d2haza1          31 VPILKYKAEWRAVGE-E-VWHSKWYD---AKEASMEGIVTIVGLKPETTYAVRLAALNG   84 (101)
T ss_dssp             SCCCEEEEEEEETTC-C-CCEEEEEE---HHHHHHHSEEEECSCCTTCEEEEEEEEEET
T ss_pred             ccEEEEEEEEeecCC-c-ceeeeeee---eecccceeEEEecCCCCCeEEEEEEEEEeC
Confidence            468899998554332 1 11222333   344445567999999997 48999999864

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.057  Score=32.32  Aligned_cols=50  Identities=18%  Similarity=0.242  Sum_probs=36.0

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|..|.|..+.+..     ...|+.+...   .-...|+++....+ .|.|-|||++.
T Consensus        44 ~~i~~Y~v~~~~~~~-----~~~~~~~~~~---~~~~~~~v~~L~p~t~Y~frV~A~N~   94 (117)
T d1uema_          44 LPASAYIIEAFSQSV-----SNSWQTVANH---VKTTLYTVRGLRPNTIYLFMVRAINP   94 (117)
T ss_dssp             SCCCEEEEEEEETTT-----EEEEEEEEEE---ECSSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCeEEEEEEEeccCC-----ceeeEEeccc---cccccceECCCCCCCEEEEEEEEEeC
Confidence            368899997766553     4568877542   11347899999987 58999999853

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.051  Score=32.04  Aligned_cols=48  Identities=10%  Similarity=0.123  Sum_probs=34.6

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ++|.+|+|......      ...|+.+-..+.    ..|++++...+ .|.|-|||++.
T Consensus        32 ~~i~~Y~v~~~~~~------~~~~~~~~~~~~----~~~~v~~L~p~t~Y~frV~A~N~   80 (97)
T d2crza1          32 SPISCYSVEMSPIE------KDEPREVYQGSE----VECTVSSLLPGKTYSFRLRAANK   80 (97)
T ss_dssp             SCCCEEEEEEECTT------SCCCEEEEEESC----SEEEEESCCTTCEEEECCEEECS
T ss_pred             CceeEEEEEEEcCc------CCceeEeecCCc----eEEEEcCCCCCEEEEEEEEEecC
Confidence            36889999643322      346888755442    46999999997 58999999864

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.47  E-value=0.079  Score=31.03  Aligned_cols=50  Identities=16%  Similarity=0.173  Sum_probs=35.2

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      ++|.+|.|....+++      ..|.++....+-.  ..++++....+. |.|-|||++.
T Consensus        31 ~~i~~Y~V~~~~~~~------~~~~~~~~~~~~~--~~~~v~~L~~~~~Y~frV~A~n~   81 (98)
T d1x5ya1          31 GGIDGYLVEYCLEGS------EEWVPANKEPVER--CGFTVKDLPTGARILFRVVGVNI   81 (98)
T ss_dssp             SCCCEEEEEEEETTC------CCCEESSSSCBSS--SEEEEECCCTTCCEEEEEEEEET
T ss_pred             CCceEEEEEEEecCc------ceeEEeeeecCce--eEEEECCCcCCeEEEEEEEEECC
Confidence            368899996554442      3598876553322  468999999975 8899999863

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.1  Score=29.85  Aligned_cols=54  Identities=11%  Similarity=-0.050  Sum_probs=38.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      +|.+|.|+......+ ......|.++......  -+.|+++.++.+. |.|-|||++.
T Consensus        32 ~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~A~n~   86 (103)
T d1qg3a2          32 EITAYEVCYGLVNDD-NRPIGPMKKVLVDNPK--NRMLLIENLRESQPYRYTVKARNG   86 (103)
T ss_dssp             CCCEEEEEEEEBCTT-SCBCSCCEEEEECCTT--CCEEEECCCCTTCCEEEEEEEEET
T ss_pred             CceEEEEEeeccccc-cccccceEEEEecCCC--ceEEEEeecCCCCEEEEEEEEEcC
Confidence            678999987665543 3445567776444333  4789999999975 8999999864

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.17  Score=29.86  Aligned_cols=45  Identities=16%  Similarity=0.285  Sum_probs=32.3

Q ss_pred             ceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehh
Q psy6481           4 IESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEIN   58 (94)
Q Consensus         4 V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVD   58 (94)
                      +..|+|. |++..     .+.|+.+...+.    -.++|+..+.+. |.|-|||.+
T Consensus        41 ~l~Y~v~-y~~~~-----~~~w~~~~~~~~----~~~~i~~L~~~t~Y~frVRa~~   86 (106)
T d1axib2          41 VLEYELQ-YKEVN-----ETKWKMMDPILT----TSVPVYSLKVDKEYEVRVRSKQ   86 (106)
T ss_dssp             CEEEEEE-EEETT-----CSSCEECCCBSS----SEEEEEEEETTSCEEEEEEEEE
T ss_pred             EEEEEEe-eeecC-----Cccceeeeeccc----ceEEECCCCCCCEEEEEEEEEE
Confidence            3467776 44432     346999876654    279999999985 899999965

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.40  E-value=0.15  Score=29.29  Aligned_cols=54  Identities=17%  Similarity=0.271  Sum_probs=36.2

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.|+......   .....|.....+...+--..++|+....+ .|.|-|||++.
T Consensus        40 ~i~~y~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~   94 (111)
T d1wisa1          40 SISRWLVEAQVGVV---GEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNI   94 (111)
T ss_dssp             CCSEEEEEECBSCC---STTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECS
T ss_pred             ceeEEEEeeeeccc---CCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEEEEEcC
Confidence            57788876655443   22345666555555555567899999987 58999999853

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.82  E-value=0.46  Score=27.95  Aligned_cols=52  Identities=17%  Similarity=0.164  Sum_probs=34.1

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|.......     ...|..+...- -+-=+.|+++....+ .|.|-|+|++.
T Consensus        39 ~~I~~Y~v~~~~~~~-----~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~N~   91 (108)
T d1x4za1          39 FPIQSFRVEYKKLKK-----VGDWILATSAI-PPSRLSVEITGLEKGISYKFRVRALNM   91 (108)
T ss_dssp             SCCCEEEEEEEESSS-----CCCCEEEEEEE-CTTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred             CccEEEEEEEEecCC-----CCceEEEEEee-cCCccEEEECCCCCCCEEEEEEEEECC
Confidence            368899996444332     23476553321 123357999999997 58999999864

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.31  Score=27.61  Aligned_cols=49  Identities=16%  Similarity=0.075  Sum_probs=34.2

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .+|.+|.|....+..       .|.....+..-  -..++++....+ .|.|-|+|++.
T Consensus        29 ~~I~~Y~i~~~~~~~-------~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~A~N~   78 (93)
T d2vkwa2          29 SPIRHYLVRYRALSS-------EWKPEIRLPSG--SDHVMLKSLDWNAEYEVYVVAENQ   78 (93)
T ss_dssp             SCCCEEEEEEEETTS-------CCCCCEEECTT--CCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CceEEEEEEeeecCc-------ceeeeeeccCC--ceEEEEeccccceEEEEEEEEEcC
Confidence            468999997655442       25554444443  356899999987 59999999864

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.62  E-value=0.63  Score=26.91  Aligned_cols=53  Identities=8%  Similarity=0.093  Sum_probs=32.4

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeecc---------CcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEAL---------PLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKAL---------PLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|.+|.|.......     ...|..+.+--..         .=...|+++..+.+. |.|-|+|++.
T Consensus        28 ~~I~~Y~ie~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~   90 (107)
T d2ic2a1          28 LPIVIFKVQYRMVGK-----RKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYS   90 (107)
T ss_dssp             CCEEEEEEEEEECC--------CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEEEET
T ss_pred             CCceEEEEEEEeccC-----CCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEEEcC
Confidence            368899997554432     2346655321111         112468999999975 8999999874

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.25  E-value=0.5  Score=27.61  Aligned_cols=48  Identities=19%  Similarity=0.362  Sum_probs=31.6

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceee-ceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNI-GKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKI-G~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      .+|..|.|+. ++..     . .|... ..+.  +-.+.|+++....+ .|.|-|+|++
T Consensus        41 ~~I~~Y~v~~-~~~~-----~-~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~frV~A~N   90 (108)
T d1wf5a1          41 SPLIRYILEM-SENN-----A-PWTVLLASVD--PKATSVTVKGLVPARSYQFRLCAVN   90 (108)
T ss_dssp             SCEEEEEEEE-ECTT-----C-CCEEEESSCC--TTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred             CccEEEEEEE-Eecc-----C-CceEEeeeec--CCccEEEECCCCCCCEEEEEEEEEc
Confidence            3688999974 4332     1 24333 2332  23467999999997 5899999985

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.10  E-value=0.37  Score=27.22  Aligned_cols=50  Identities=12%  Similarity=0.150  Sum_probs=33.7

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +|..|+|+...+..   .....|... .+.+  --..++|+....+ .|.|-|||++
T Consensus        43 ~i~~Y~i~~~~~~~---~~~~~~~~~-~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n   93 (111)
T d1x5ka1          43 KITGYIIYYSTDVN---AEIHDWVIE-PVVG--NRLTHQIQELTLDTPYYFKIQARN   93 (111)
T ss_dssp             CCCEEEEEEESCSS---SCTTTSEEE-EEST--TCSEEEECSCCSSSEEEEEEEEEC
T ss_pred             ceeeeEEeeeecCC---CCcceeEEE-EeCC--CeeEEEECCCCCCCEEEEEEEEEc
Confidence            57889998665443   224456654 2322  2236899999997 5999999986

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.59  E-value=1  Score=25.44  Aligned_cols=51  Identities=14%  Similarity=0.145  Sum_probs=32.8

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      .+|..|.|+.-....     ...|..+...-  +--..|+++....+. |.|-|||++.
T Consensus        33 ~~i~~Y~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~frV~A~n~   84 (100)
T d1cfba1          33 SPILHYTIQFNTSFT-----PASWDAAYEKV--PNTDSSFVVQMSPWANYTFRVIAFNK   84 (100)
T ss_dssp             SCCCEEEEEEEESSS-----TTCCEEEEEEE--ETTCSEEEEECCSSEEEEEEEEEEET
T ss_pred             cceEEEEEEEecCCC-----CceeeEEeeec--CCceEEEEecCCCCCEEEEEEEEEeC
Confidence            368899987644332     22344444432  223468999999975 8999999863

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.35  E-value=0.8  Score=25.58  Aligned_cols=50  Identities=10%  Similarity=-0.057  Sum_probs=33.8

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +.|.+|.|.....+.      ..|.+...+..-.  -.++|+....+ .|.|.|+|+..
T Consensus        32 ~~i~~Y~v~~~~~~~------~~~~~~~~~~~~~--t~~~i~~L~p~t~Y~~~V~a~~~   82 (95)
T d2fnba_          32 STIIGYRITVVAAGE------GIPIFEDFVDSSV--GYYTVTGLEPGIDYDISVITLIN   82 (95)
T ss_dssp             SSCCEEEEEEEEETS------CCEEEEEECCSSC--SEEEECCCCTTSEEEEEEEEEET
T ss_pred             ceEEeEEEEEEEeec------cceEEEEEeCCCC--eEEEEecccCCEEEEEEEEEEeC
Confidence            467899987655442      2355554544332  36889999997 48999999853

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.89  E-value=0.87  Score=25.57  Aligned_cols=53  Identities=17%  Similarity=0.225  Sum_probs=35.6

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      ++.+|++.....+...   ...|..+ .+....--+.++|+....+. |.|-|||+..
T Consensus        40 ~i~~y~v~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~   93 (109)
T d1va9a1          40 VIRGYQIGYRENSPGS---NGQYSIV-EMKATGDSEVYTLDNLKKFAQYGVVVQAFNR   93 (109)
T ss_dssp             CCCEEEEEEEESSTTS---CCSCBCC-BCCCCSSEEEEEEESCCSSCCEEEEEEEEET
T ss_pred             cEEEEEEEEeeccccc---cceeeee-EEecCCCeeEEEECCCCcceEEEEEEEEEcC
Confidence            6778999866655322   2234433 33334455789999999975 9999999864

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.87  Score=26.46  Aligned_cols=49  Identities=14%  Similarity=0.072  Sum_probs=33.1

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +|.+|.|+-..++.     ...|..+..+.  +--+.++|+..+.+ .|.|-|+|+.
T Consensus        50 ~i~~Y~i~y~~~~~-----~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n   99 (117)
T d1wfoa1          50 IILAYQITHRLNTT-----TANTATVEVLA--PSARQYTATGLKPESVYLFRITAQT   99 (117)
T ss_dssp             CCCEEEEEEEESSC-----CCSCCCEEEEC--TTCCEEEEESCCSSSEEEEEEEEEC
T ss_pred             ceEEEeeeeeeccC-----CCceEeEEecC--CceEEEEECCCCCCCEEEEEEEEEC
Confidence            58899998554443     23344443322  34568999999997 5899999984

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.20  E-value=0.66  Score=26.93  Aligned_cols=48  Identities=15%  Similarity=0.065  Sum_probs=33.6

Q ss_pred             ceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           4 IESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         4 V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +..|+|--..+.+     ...|+.+..+..-  --.++|+....+ .|.|-|||++
T Consensus        38 ~~~Y~i~y~~~~~-----~~~w~~v~~~~~~--~~~~~l~~L~p~t~Y~frVra~~   86 (106)
T d1cd9b2          38 EQECELRYQPQLK-----GANWTLVFHLPSS--KDQFELCGLHQAPVYTLQMRCIR   86 (106)
T ss_dssp             CEEEEEEEEESST-----TCCCEEEEEEESC--EEEEEECCCCSCSCEEEEEEEEE
T ss_pred             ceEEEEEEeeccc-----cccceeeecccCC--ceEEEEeccCCCeEEEEEEEEEe
Confidence            5678876554443     3459998765432  245789999987 5999999984

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.57  E-value=0.63  Score=26.39  Aligned_cols=49  Identities=16%  Similarity=0.095  Sum_probs=31.8

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.++......      ..|..+....  .--..++++....+ .|.|-|||++.
T Consensus        33 ~i~~y~~~~~~~~~------~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~frV~A~n~   82 (104)
T d1bpva_          33 KITSYIVEKRDLPN------GRWLKANFSN--ILENEFTVSGLTEDAAYEFRVIAKNA   82 (104)
T ss_dssp             CCSCCEEEEEETTS------CCCEECCCSC--CCSSEEEECSCCSSCCEEEEEEEECT
T ss_pred             eEEEEEEEeecccc------cceeEEEeec--cceeEEEEcCCCCCCEEEEEEEEEEC
Confidence            46677777555442      2355543322  23456899999987 48999999864

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.49  E-value=0.77  Score=26.68  Aligned_cols=48  Identities=15%  Similarity=0.091  Sum_probs=32.2

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +|..|.++..+.+.      ..|+....+.  +--+.|+|+....+ .|.|-|+|+.
T Consensus        41 ~i~~Y~v~~~~~~~------~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~rV~A~n   89 (107)
T d1x5fa1          41 DNLTYSVFYTKEGI------ARERVENTSH--PGEMQVTIQNLMPATVYIFRVMAQN   89 (107)
T ss_dssp             CSSEEEEEEEETTC------CCCEEEECSS--TTCSEEEECSCCTTCEEEEEEEEEC
T ss_pred             ceEEEEEEEEeCCC------CceEEEEEeC--CCccEEEecCCCCCCEEEEEEEEEe
Confidence            46788888554432      2233333333  34588999999997 5899999986

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.47  E-value=0.64  Score=26.59  Aligned_cols=48  Identities=17%  Similarity=0.152  Sum_probs=31.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVDv   59 (94)
                      ++..|.++......     ...|+.+....    -..|+++..+.+. |.|-|||++.
T Consensus        42 ~~~~y~v~~~~~~~-----~~~~~~~~~~~----~~~~~i~~L~p~t~Y~~rV~A~n~   90 (107)
T d2crma1          42 TINKYVVEMAEGSN-----GNKWEMIYSGA----TREHLCDRLNPGCFYRLRVYCISD   90 (107)
T ss_dssp             CCCEEEEEEEESSS-----SCCCEEEECSS----CSEEEECSCCTTSCEEEEEEEEET
T ss_pred             eEEEEEEEEEeecC-----CCcEEEeecCC----ccEEEEeccCCCCEEEEEEEEECC
Confidence            56677776433221     34465554332    3458999999975 8999999863

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=85.40  E-value=0.55  Score=26.61  Aligned_cols=22  Identities=9%  Similarity=0.096  Sum_probs=18.7

Q ss_pred             eeeEeeeeecc-eEEEEeeehhH
Q psy6481          38 MACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus        38 MACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      ..++++....+ .|+|-|||+|.
T Consensus        51 t~~~~~~L~p~t~Y~~~V~A~n~   73 (88)
T d1k85a_          51 TTATISGLAADTSYTFTVKAKDA   73 (88)
T ss_dssp             SEEEECCCCSSCEEEEEEEEEET
T ss_pred             CEEEECCCCCCCEEEEEEEEEEC
Confidence            46899999997 58999999974

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.21  E-value=0.47  Score=27.07  Aligned_cols=47  Identities=13%  Similarity=0.114  Sum_probs=30.2

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      .|.+|.|+ |++..+     ..|..+....    -..++|+....+ .|.|-|+|++.
T Consensus        38 ~i~~Y~i~-y~~~~~-----~~~~~~~~~~----~~~~~i~~L~p~t~Y~~~V~A~n~   85 (102)
T d1x5za1          38 TIANYELV-YKDGEH-----GEEQRITIEP----GTSYRLQGLKPNSLYYFRLAARSP   85 (102)
T ss_dssp             CCCEEEEC-BEESSS-----CCCBCCEECS----SSEEEEECCCTTCEEEECEEEECS
T ss_pred             CccceEEE-EEeCCC-----CceEEEEcCC----cCEEEECCCCCCCEEEEEEEEEcC
Confidence            57789997 444432     2243332221    147999999997 58999999753

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.83  E-value=1  Score=25.24  Aligned_cols=35  Identities=9%  Similarity=-0.124  Sum_probs=22.3

Q ss_pred             cceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481          24 LWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus        24 ~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      .|..+-++....-.+.++++++..+ .|.|-|||..
T Consensus        49 ~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~~   84 (101)
T d1iarb2          49 ADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWA   84 (101)
T ss_dssp             SCEEEEEECSSCCEEEECC-----CCCEEEEEEEEC
T ss_pred             eeeeeeeeccCccceEEEECCCCCCCEEEEEEEEEc
Confidence            3555556665666789999999997 5899999986

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.80  E-value=1.1  Score=25.31  Aligned_cols=45  Identities=4%  Similarity=-0.068  Sum_probs=30.9

Q ss_pred             ceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           4 IESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         4 V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +..|++- |++..     .+.|+.+...+..    .++|+....+ .|.|-|||.+
T Consensus        41 ~l~Y~v~-~~~~~-----~~~~~~~~~~~~~----~~~i~~L~p~t~Y~~rVra~~   86 (103)
T d1f6fb2          41 TMEYEIR-LKPEE-----AEEWEIHFTGHQT----QFKVFDLYPGQKYLVQTRCKP   86 (103)
T ss_dssp             CEEEEEE-EEESS-----CSCCEEEEEETCS----EEEECCCCTTCEEEEEEEEEE
T ss_pred             EEEEEEE-EEeCC-----Ccceeeeccccee----EEEeCCCCcceEEEEEEEEEe
Confidence            3466664 34442     4678877555432    5899988887 5899999986

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.22  E-value=1.3  Score=24.53  Aligned_cols=48  Identities=13%  Similarity=0.009  Sum_probs=33.3

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      .+|..|.|+...++.      ..|..+   ...+--..++|+....+ .|.|-|+|+.
T Consensus        28 g~i~~Y~i~~~~~~~------~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   76 (94)
T d2dn7a1          28 GELLGYRLQYCRADE------ARPNTI---DFGKDDQHFTVTGLHKGTTYIFRLAAKN   76 (94)
T ss_dssp             SCCCEEEEEEEETTC------SSCEEE---EEETTCCEEEEECCCTTCEEEEEEEEEE
T ss_pred             CceEEEEEEEEEcCC------CCcEEE---EcCCCccEEEEEccCCeeEEEEEEEEEc
Confidence            368899999554442      236544   22344567999999997 5899999975

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.22  E-value=1.2  Score=24.44  Aligned_cols=46  Identities=11%  Similarity=0.181  Sum_probs=30.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccce-eeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWK-NIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WK-KIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +|..|++........      .|+ .+...+    -..++|+..+.+ .|.|-|||+.
T Consensus        30 ~i~~Y~v~~~~~~~~------~~~~~~~~~~----~~~~~i~~L~p~t~Y~~~V~A~n   77 (95)
T d2djsa1          30 IILDYEIRYYEKEHN------EFNSSMARSQ----TNTARIDGLRPGMVYVVQVRART   77 (95)
T ss_dssp             CEEEEEEEEEETTSC------STTCEEEEES----SSEEEEESCCTTCEEEEEEEEEE
T ss_pred             ceEEeeeeeeeeccC------cceeEeecCC----ccEEEEeecCCccEEEEEEEEEc
Confidence            577898877654421      222 222222    347899999997 4889999974

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.66  E-value=1.2  Score=24.55  Aligned_cols=49  Identities=12%  Similarity=0.043  Sum_probs=31.7

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehh
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEIN   58 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVD   58 (94)
                      .+|.+|.|.....+.      ..|...-.+..-  -..++|+....+. |.|-|+|+.
T Consensus        26 ~~i~~Y~i~~~~~~~------~~~~~~~~~~~~--~~~~~~~~L~p~t~Y~~~V~a~n   75 (89)
T d1fnha3          26 ARITGYIIKYEKPGS------PPREVVPRPRPG--VTEATITGLEPGTEYTIYVIALK   75 (89)
T ss_dssp             SCCSEEEEEEECTTS------CCEECTTCCCTT--CCEEEEESCCTTCEEEEEEEEES
T ss_pred             cCCceEEEEEeeccC------CccEEEEEcCCC--ccEEEEEeeeCCCEEEEEEEEEc
Confidence            368899997543332      224443333222  2469999999975 899999975

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.05  E-value=0.65  Score=27.28  Aligned_cols=50  Identities=10%  Similarity=-0.110  Sum_probs=32.8

Q ss_pred             cceeEEEEEE-eecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAY-QENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYay-qE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.|+.. ++..   .....|+.+.....    ..|+|+....+ .|.|-|||++.
T Consensus        46 ~i~~y~i~y~~~~~~---~~~~~~~~~~~~~~----~~~~v~~L~p~t~Y~frV~A~n~   97 (120)
T d1wfua_          46 GPQEQWLRFSIEEED---PKMHSYGVIYTGYA----TRHVVEGLEPRTLYKFRLKVTSP   97 (120)
T ss_dssp             SCGGGCCEEEEEEEC---TTTCCEEEEEEESC----SEEEEESCCTTCEEEEEEEEECS
T ss_pred             cccceeeeeeeeccc---ccccceeeeccccc----cEEeCCCCCCCcEeeEEEEEEeC
Confidence            4667776433 3322   22456877754332    46999999997 59999999853

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.02  E-value=1.7  Score=24.68  Aligned_cols=48  Identities=10%  Similarity=0.176  Sum_probs=31.2

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      +|.+|+|+....+.     ...|... .+..  --+.++|+..+.+ .|.|.|+|++
T Consensus        40 ~i~~Y~i~~~~~~~-----~~~~~~~-~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n   88 (106)
T d1wfna1          40 ILTGYRISWEEYNR-----TNTRVTH-YLPN--VTLEYRVTGLTALTTYTIEVAAMT   88 (106)
T ss_dssp             CCCEEEEEEEESSC-----GGGCCCE-EECS--SCCEEEEESCCTTCEEEEEEEEEC
T ss_pred             cEEeEEEEEEECCC-----CcceEEE-ecCC--CeeEEEEccCCCCCEEEEEEEEEC
Confidence            57899998655442     1223221 2222  2357899999997 5899999985

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.72  E-value=0.98  Score=25.38  Aligned_cols=51  Identities=14%  Similarity=0.129  Sum_probs=33.5

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      .+|..|+|+......   .....|+.. .+.  .--+.++|+.+..+ .|+|-|||++
T Consensus        32 ~~i~~Y~v~y~~~~~---~~~~~~~~~-~~~--~~~~~~~i~~L~p~t~Y~~~v~a~n   83 (101)
T d1x4ya1          32 TPIHGFYIYYRPTDS---DNDSDYKKD-MVE--GDRYWHSISHLQPETSYDIKMQCFN   83 (101)
T ss_dssp             CCCCEEEEEECCTTS---CSGGGCCCE-EEE--TTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             cceEEEEEEeeeccc---eeeeeeeEE-EEc--CCeeEEEEcCCCCCCEEEEEEEEEc
Confidence            367889998665443   123445543 332  33457899999996 5899999975

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.43  E-value=1.2  Score=25.37  Aligned_cols=46  Identities=15%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             ccceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehh
Q psy6481           2 AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus         2 A~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      .+|.+|.|+.....+      +.|..+. +.    -..++|+....+ .|.|-|||+.
T Consensus        39 g~i~~Y~v~~~~~~~------~~~~~~~-~~----~~~~~i~~L~p~t~Y~~~V~A~n   85 (103)
T d1x5ga1          39 GEIQNYKLYYMEKGT------DKEQDVD-VS----SHSYTINGLKKYTEYSFRVVAYN   85 (103)
T ss_dssp             SCCSEEEEEEEETTC------CCCCCEE-EC----SSEEEECSCCTTCEEEEEEEEEC
T ss_pred             ccEEEEEEEEEeCCC------ceeEEEe-cc----ccEEecCCCCCCCEEEEEEEEEc
Confidence            368899998665432      3466652 22    246889999987 5899999985

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.02  E-value=1.2  Score=25.66  Aligned_cols=49  Identities=6%  Similarity=0.060  Sum_probs=31.0

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecc-eEEEEeeehhH
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLF-CTKLMVPEINV   59 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~-~yYFaVRAVDv   59 (94)
                      +|..|.|+ |.+..      ..|..+-+.- -.--..++++....+ .|.|-|||+..
T Consensus        36 ~i~~Y~v~-~~~~~------~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~rV~A~n~   85 (108)
T d1v5ja_          36 RLDGYVLE-GRQGS------QGWEVLDPAV-AGTETELLVPGLIKDVLYEFRLVAFAG   85 (108)
T ss_dssp             CCCBEEEE-EEETT------CCCEEEEEEE-CSSCCEEECCCCCTTSCEECCBEEEET
T ss_pred             ceeEEEEE-eeeee------eeeeeccccc-cceeeeEEEEeccCCcEEEEEEEEEeC
Confidence            57788887 44442      2366553311 112256888888886 59999999853

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.88  E-value=2.2  Score=23.73  Aligned_cols=23  Identities=9%  Similarity=-0.035  Sum_probs=18.3

Q ss_pred             cceeeEeeeeecc-eEEEEeeehh
Q psy6481          36 LPMACTLTQIVLF-CTKLMVPEIN   58 (94)
Q Consensus        36 LPMACTLTqf~~~-~yYFaVRAVD   58 (94)
                      =-...+|+..+.+ .|.|.|+|++
T Consensus        63 ~~~~~~v~~L~p~t~Y~~~V~a~~   86 (101)
T d2cuia1          63 TRHSAVLRDLRSGTLYSLTLYGLR   86 (101)
T ss_dssp             TCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             ceeEEEeCCCCcCCEEEEEEEEEe
Confidence            3456788898987 4899999975

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.03  E-value=3.3  Score=24.65  Aligned_cols=52  Identities=17%  Similarity=0.230  Sum_probs=36.4

Q ss_pred             cceeEEEEEEeecCCCCCCcccceeeceeeccCcceeeEeeeeecce-EEEEeeehh
Q psy6481           3 AIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIVLFC-TKLMVPEIN   58 (94)
Q Consensus         3 ~V~sYeLYayqE~~~~~~~ts~WKKIG~VKALPLPMACTLTqf~~~~-yYFaVRAVD   58 (94)
                      .|.+|.|+.+.....  +....|..+. + ..+-=..++|+.+..+. |=|-|+|..
T Consensus        44 ~i~gY~v~y~~~~~~--~~~~~~~~~~-v-~~~~~~s~~i~~L~p~t~Y~f~V~A~n   96 (120)
T d1ujta_          44 FIQGYRVMYRQTSGL--QATSSWQNLD-A-KVPTERSAVLVNLKKGVTYEIKVRPYF   96 (120)
T ss_dssp             SCCEEEEEEEESSSS--STTTCCEEEE-C-CCTTCCEEEEESCCSSEEEEEEEEEES
T ss_pred             cEEEEEEEeeecccC--CCCcceEEEE-e-ccCceeEEEECCCCCCCEEEEEEEEEe
Confidence            578999996664432  3345688773 3 23445679999999974 889999864