Psyllid ID: psy665

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAEV
Secondary Structure (PSIPRED)
cEEEEcccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cEEEEEccccccccccccccHHHHHHHHHHHHHHcHcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHHHHcHcccHccc
Coil and Loop (DISEMBL)
MLLFMLssldtsdkvgkttTLSGVILLALYLSCdsftsnwqgVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQqggfyqslhfmlqfpsftlDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAEV
Flexible Loop (DISEMBL)
MLLFMLSSldtsdkvgkTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAslkkklnqaev
Low Complexity Region (SEG)
MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISllgilgilmvlmAVLLQAYCKLRKASLKKKLNQAEV
Disordered region (IsUnstruct)
**************VGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK************
Disordered Region (DISOPRED)
MLLFM****************SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ*******************
Disordered Region (DISEMBL)
MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASL*********
Disordered Region (DISPRO)
MLLFMLSSL*******KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKA***********
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAEV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	180	2.2.26 [Sep-21-2011]
Q9VEI3	465	Adenosine 3'-phospho 5'-p	yes	N/A	0.961	0.372	0.540	2e-45
Q91ZN5	431	Adenosine 3'-phospho 5'-p	yes	N/A	0.938	0.392	0.543	3e-40
Q8TB61	432	Adenosine 3'-phospho 5'-p	yes	N/A	0.972	0.405	0.519	1e-38
Q5R9A1	432	Adenosine 3'-phospho 5'-p	yes	N/A	0.972	0.405	0.519	1e-38
Q8MXJ9	425	Adenosine 3'-phospho 5'-p	yes	N/A	0.844	0.357	0.450	3e-31
Q6NMB6	344	UDP-galactose/UDP-glucose	yes	N/A	0.861	0.450	0.361	1e-18
Q55DM5	359	Adenosine 3'-phospho 5'-p	yes	N/A	0.838	0.420	0.331	6e-18
Q6NM25	347	UDP-galactose/UDP-glucose	no	N/A	0.911	0.472	0.325	1e-17
Q8WZJ9	322	UDP-galactose transporter	yes	N/A	0.783	0.437	0.335	2e-13
Q8AWB6	325	Solute carrier family 35	no	N/A	0.677	0.375	0.344	3e-13

>sp|Q9VEI3|S35B2_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Drosophila melanogaster GN=sll PE=1 SV=1

 Score =  181 bits (459), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 1/174 (0%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M+ FM  S D+S   G  TTL+G+ LL++Y+  DSFT+NWQG LF+SY +T LQMM G N
Sbjct: 283 MIFFMSGSSDSSKASG-VTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVN 341

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFS +FT  SL  QGGF  SL F  + P F  D ++LS+ SA GQLF++ TI  FG +VF
Sbjct: 342 LFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVF 401

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKK 174
           TIIMT+RQ +AI+LSC IY H ISLLGI G+L+V +A+ L+ YC  R  +++K+
Sbjct: 402 TIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKR 455

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Required for the dorsoventral patterning, suggesting that it mediates the transport of the sulfate donor required for the sulfotransferase activity of pip (pipe).
Drosophila melanogaster (taxid: 7227)

>sp|Q91ZN5|S35B2_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Mus musculus GN=Slc35b2 PE=2 SV=1

 Score =  164 bits (415), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/171 (54%), Positives = 124/171 (72%), Gaps = 2/171 (1%)

Query: 3   LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
           +F+LSS     +    TTLSG++LLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct: 252 MFLLSS-GPEPRSSPATTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 309

Query: 63  SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
           SCLFT  SLL+QG   +   FM +   F L  +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct: 310 SCLFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTI 369

Query: 123 IMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKK 173
           IMT+RQ +AILLSC++Y H ++++G LG+ +V  A+LL+ Y + RK   KK
Sbjct: 370 IMTLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKK 420

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Mus musculus (taxid: 10090)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 2/177 (1%)

Query: 3   LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
           +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG N F
Sbjct: 252 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNFF 309

Query: 63  SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
           SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct: 310 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 369

Query: 123 IMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAE 179
           IMT+RQ  AILLSC++Y H ++++G LG+ +V  A+LL+ Y + R     KK    E
Sbjct: 370 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVE 426

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q5R9A1|S35B2_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Pongo abelii GN=SLC35B2 PE=2 SV=2

 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 2/177 (1%)

Query: 3   LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
           +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG N F
Sbjct: 252 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNFF 309

Query: 63  SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
           SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct: 310 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 369

Query: 123 IMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAE 179
           IMT+RQ  AILLSC++Y H ++++G LG+ +V  A+LL+ Y + R     KK    E
Sbjct: 370 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVE 426

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Pongo abelii (taxid: 9601)

>sp|Q8MXJ9|S35B2_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Caenorhabditis elegans GN=pst-1 PE=3 SV=4

 Score =  134 bits (338), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 101/153 (66%), Gaps = 1/153 (0%)

Query: 19  TTLSGVILLALYLSCDSFTSNWQGVLFESY-KVTSLQMMFGTNLFSCLFTAVSLLQQGGF 77
           T+ SG+IL+A YL  D+FT NWQ  LF++  KV+  QMMFG N FS +  AVSL++QG  
Sbjct: 266 TSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMFGVNFFSAILCAVSLIEQGTL 325

Query: 78  YQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCI 137
           + S+ F  +   F+ D  LLS+S A GQ+F++ TI +FG IVF +IMT+RQ L+I+LS I
Sbjct: 326 WSSIKFGAEHVDFSRDVFLLSLSGAIGQIFIYSTIERFGPIVFAVIMTIRQMLSIVLSTI 385

Query: 138 IYAHPISLLGILGILMVLMAVLLQAYCKLRKAS 170
           +Y H ++ L  +G ++V  A+ +  + K    S
Sbjct: 386 MYGHELTFLAAIGFMIVFAAIFVDIHKKYSDKS 418

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 85/155 (54%)

Query: 16  GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQG 75
           G+  T+ GV L+A YL  D FTS +Q  LF+ Y +     +F T L SC+ +   L+ QG
Sbjct: 172 GRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQG 231

Query: 76  GFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLS 135
               ++ F+       LD  LLS  + A Q F+ +TI  FGA+ F  IMT RQ  +I+LS
Sbjct: 232 HLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLS 291

Query: 136 CIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAS 170
           CI ++HP+S    +G ++V  ++  +     +K S
Sbjct: 292 CIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNS 326

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55DM5|S35B2_DICDI Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Dictyostelium discoideum GN=slc35b2 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 89/154 (57%), Gaps = 3/154 (1%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M+ F+   +  ++    + T  G+IL+ALY+  DSFTS +Q  +F+ Y +++   M   N
Sbjct: 168 MIFFLTGKISNNES---SNTSYGIILMALYMFFDSFTSTFQEKMFKGYTMSTYDQMIYVN 224

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
             S + +   L+  G  + ++ F+        D  +LS S+  GQ+ +++TI +FGA+VF
Sbjct: 225 GCSSIISVFILILNGRLFPAIEFISTHNGVFFDSTMLSASAGLGQMVIYYTIKEFGALVF 284

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMV 154
           + IM  RQ ++I+LS +IY HP+S    +G L+V
Sbjct: 285 STIMVTRQMVSIILSTLIYLHPLSNTQWIGALLV 318

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6NM25|UTR5_ARATH UDP-galactose/UDP-glucose transporter 5 OS=Arabidopsis thaliana GN=UTR5 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 2/166 (1%)

Query: 16  GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQG 75
           G+  T+ GV L+  YL  D FTS +Q  LF+ Y +     +F T + S + +   L+ QG
Sbjct: 173 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTICSSILSFTGLILQG 232

Query: 76  GFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLS 135
               ++ F+ +      D  LLS  + A Q F+ +TI  FGA+ F  IMT RQ  +I+LS
Sbjct: 233 HLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLS 292

Query: 136 CIIYAHPISLLGILGILMVLMAVLLQAYCKLR--KASLKKKLNQAE 179
           CI ++HP+S    +G ++V  ++  + + K +  K    ++L + E
Sbjct: 293 CIWFSHPLSWEQCIGSVIVFGSLYAKTFVKKKSEKPPAAQELPRDE 338

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8WZJ9|HUT1_SCHPO UDP-galactose transporter homolog 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hut1 PE=3 SV=1

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)

Query: 34  DSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLD 93
           D  T+  Q  +F  YK++S+ MM   NL       + L+      Q L F+ + PS   D
Sbjct: 178 DGITNTTQDKVFGKYKLSSVTMMIAVNLGIACLNGLYLISPFCNQQPLSFINRHPSILKD 237

Query: 94  CILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILM 153
            +L + + + GQLF+FFT+ KFG+I    I   R+   +LLS   + H +S +  LGIL+
Sbjct: 238 MLLFACTGSVGQLFIFFTLEKFGSITLVTITLTRKIFTMLLSVFHFHHTVSSIQWLGILL 297

Query: 154 VLMAVLLQAYCKL--RKASLKKK 174
           V + + L+A  K+    ++ KKK
Sbjct: 298 VFLGISLEAGLKILNNNSTAKKK 320

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen (By similarity). Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8AWB6|S35B1_CHICK Solute carrier family 35 member B1 OS=Gallus gallus GN=SLC35B1 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 68/122 (55%)

Query: 41  QGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS 100
           Q  +   Y+  S  MM   NL+S LF    +L  G  ++ L F  ++PS   + +L  ++
Sbjct: 193 QDHMRAHYQTGSNHMMLNVNLWSTLFLGAGILFTGELWEFLSFTERYPSIIYNILLFGLT 252

Query: 101 SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL 160
           SA GQ F+F T+  FG +  +II T R+   IL S I++A+PIS +  +G ++V + + L
Sbjct: 253 SALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISTMQWVGTVLVFLGLGL 312

Query: 161 QA 162
            A
Sbjct: 313 DA 314

Probable sugar transporter.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
242005685	442	adenosine 3'-phospho 5'-phosphosulfate t	0.972	0.395	0.607	1e-53
405975870	436	Adenosine 3'-phospho 5'-phosphosulfate t	0.977	0.403	0.573	2e-53
170061268	474	UDP-galactose transporter [Culex quinque	0.961	0.364	0.574	2e-50
270011121	432	slalom [Tribolium castaneum]	0.983	0.409	0.566	7e-50
60393084	474	slalom PAPS transporter [Lucilia sericat	0.961	0.364	0.551	1e-48
443703694	402	hypothetical protein CAPTEDRAFT_94388 [C	0.922	0.412	0.578	8e-48
157111008	469	UDP-galactose transporter [Aedes aegypti	0.977	0.375	0.530	2e-47
198422259	440	PREDICTED: similar to Slc35b2 protein [C	0.955	0.390	0.528	2e-47
156552830	447	PREDICTED: adenosine 3'-phospho 5'-phosp	0.977	0.393	0.550	7e-47
198454329	460	GA20487 [Drosophila pseudoobscura pseudo	0.961	0.376	0.551	1e-46

>gi|242005685|ref|XP_002423693.1| adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Pediculus humanus corporis] gi|212506869|gb|EEB10955.1| adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Pediculus humanus corporis]

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/176 (60%), Positives = 130/176 (73%), Gaps = 1/176 (0%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M  FML S +        TT SG+ILLA YL  DSFTSNWQGVLF  + ++S+QMM G N
Sbjct: 259 MTFFMLGSKENKAH-DNVTTFSGIILLAAYLIFDSFTSNWQGVLFSQFHMSSVQMMCGVN 317

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFSCLFT VSL+QQGGF  S+HFM+ +  F  DC+LLSI SAAGQLF+F+TI  FGA+VF
Sbjct: 318 LFSCLFTTVSLIQQGGFIPSIHFMINYHKFMFDCLLLSICSAAGQLFIFYTISNFGAVVF 377

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLN 176
            IIMT+RQGLAILLSC+IY H IS LGILGI +V ++V L+ YC  R  ++ +K N
Sbjct: 378 VIIMTIRQGLAILLSCLIYHHNISPLGILGIFLVFISVFLRIYCNQRLKAINRKRN 433

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405975870|gb|EKC40405.1| Adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Crassostrea gigas]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/176 (57%), Positives = 134/176 (76%)

Query: 3   LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
           LF+L+S D +   G  TT+SGV LL  Y+  DSFTSNWQG LF+ Y+V+S+QMM G NLF
Sbjct: 255 LFLLTSGDVTRHKGSVTTVSGVFLLIGYMVFDSFTSNWQGELFKRYRVSSIQMMTGVNLF 314

Query: 63  SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
           SCL T VSL++QGGF++SL FM + P F    I+LS+ SA GQLF+F+TI +FG + FTI
Sbjct: 315 SCLLTGVSLIEQGGFFESLAFMSKHPDFIFHAIVLSLCSAGGQLFIFYTIAQFGPVTFTI 374

Query: 123 IMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQA 178
           IMT+RQGLAILLSC+IY HP++L+GI+GI +V +A+ L+ Y   RK +L++K  QA
Sbjct: 375 IMTIRQGLAILLSCVIYGHPVTLIGIMGIFVVFLALFLRIYANQRKRALQQKNKQA 430

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|170061268|ref|XP_001866162.1| UDP-galactose transporter [Culex quinquefasciatus] gi|167879563|gb|EDS42946.1| UDP-galactose transporter [Culex quinquefasciatus]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M+ F+  S D S K    TTL+GV+LL  Y++ DSFTSNWQG LF++Y ++S+QMM G N
Sbjct: 283 MIFFLTGSTDES-KTTAMTTLTGVLLLICYMTFDSFTSNWQGELFKTYSMSSIQMMCGVN 341

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFS LFTA SL  QGGF  SL F  + P F LDC++LSISSA GQLF+F+TI  FGA+VF
Sbjct: 342 LFSTLFTAASLSMQGGFSSSLEFAAEHPKFVLDCVVLSISSAIGQLFIFYTIATFGAVVF 401

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKK 174
           TIIMT+RQ +AILLSC+IY H IS LGI+G+++V +A+ L+ YC  R  ++K++
Sbjct: 402 TIIMTLRQAIAILLSCLIYKHSISFLGIVGVMIVFLAIFLRVYCNQRLKAIKRR 455

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011121|gb|EFA07569.1| slalom [Tribolium castaneum]

 Score =  201 bits (512), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 131/180 (72%), Gaps = 3/180 (1%)

Query: 1   MLLFMLS-SLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGT 59
           ML+FML    D +D     TTLSG  LL LY+  DSFTSNWQ  LF+SYK+  +QMM   
Sbjct: 251 MLMFMLDVGNDRADSA--ITTLSGAFLLILYIVFDSFTSNWQQALFKSYKIKPVQMMCCV 308

Query: 60  NLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIV 119
           NLFSC+FTAVSLLQQ  F++S HFML++P F +DC+LLS+ SAAGQLF+F TI KFG ++
Sbjct: 309 NLFSCVFTAVSLLQQDVFFKSFHFMLKYPQFVVDCLLLSVCSAAGQLFIFSTIAKFGPLI 368

Query: 120 FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAE 179
           F II T+RQGL++LLSCIIY H +++ G+ GI +V  +VLL+ YC  R  SL+K  N  +
Sbjct: 369 FAIITTIRQGLSVLLSCIIYNHHVTIAGVFGITLVFTSVLLRIYCGHRLKSLRKSANAPQ 428

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|60393084|gb|AAX19492.1| slalom PAPS transporter [Lucilia sericata]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/174 (55%), Positives = 126/174 (72%), Gaps = 1/174 (0%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M+ FM+ S D+S K    TT++G+ LLA+Y+  DSFT+NWQG LF+ Y +T LQMM G N
Sbjct: 292 MIFFMMGSADSS-KANGVTTMTGIFLLAMYMVFDSFTANWQGDLFKGYGMTPLQMMCGVN 350

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFS +FTA SL  QGGF  SL F  + P F  D I+LSISSA GQLF+F+TI  FG +VF
Sbjct: 351 LFSTIFTAASLSAQGGFMDSLQFATEHPKFVFDIIILSISSAVGQLFIFYTISVFGPVVF 410

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKK 174
           TIIMT+RQ  AILLSC+IY H IS+LGI G+++V  A+ ++ YC  R  +++K+
Sbjct: 411 TIIMTLRQAAAILLSCLIYHHSISVLGIFGVMVVFFAIFMRVYCNQRMKAMRKR 464

Source: Lucilia sericata

Species: Lucilia sericata

Genus: Lucilia

Family: Calliphoridae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443703694|gb|ELU01129.1| hypothetical protein CAPTEDRAFT_94388 [Capitella teleta]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 125/166 (75%)

Query: 3   LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
           +F+L+S D      K TT SGVI+L  YL  D+FTSNWQG +F++YKV+S QMM G N F
Sbjct: 215 MFLLTSGDAVHDDSKATTFSGVIILLGYLLFDAFTSNWQGEIFKAYKVSSFQMMAGVNFF 274

Query: 63  SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
           S +FT  SL++QGGF +SL FM + P F    ILLSI SA GQLF+F+TI +FGA+ FTI
Sbjct: 275 SVIFTTASLVEQGGFVESLAFMARHPDFLWHSILLSICSAIGQLFIFYTISQFGAVTFTI 334

Query: 123 IMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 168
           IMTVRQG AILLSCIIYAHP++++GILGI++V +A+ L+ +   +K
Sbjct: 335 IMTVRQGFAILLSCIIYAHPVTIVGILGIMVVFLAMFLRIHFGQQK 380

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|157111008|ref|XP_001651353.1| UDP-galactose transporter [Aedes aegypti] gi|108878600|gb|EAT42825.1| AAEL005678-PA [Aedes aegypti]

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 130/183 (71%), Gaps = 7/183 (3%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLA---LYLSCDSFTSNWQGVLFESYKVTSLQMMF 57
           M+ F+  S D S    KTT ++ +  +     Y+  DSFTSNWQG LF++Y ++S+QMM 
Sbjct: 282 MIFFLTGSTDES----KTTAMTTLTGVLLLTFYMVFDSFTSNWQGELFKTYSMSSIQMMC 337

Query: 58  GTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGA 117
           G NLFS LFTA SL  QGGFY SL F  + P F LDCI+LSISSA GQLF+F+TI  FGA
Sbjct: 338 GVNLFSTLFTAASLYMQGGFYSSLQFAAEHPKFVLDCIVLSISSAVGQLFIFYTIATFGA 397

Query: 118 IVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQ 177
           + FTIIMT+RQ +AILLSC+IY H IS LG++G+++V +A+ L+ YC  R  ++K++   
Sbjct: 398 VAFTIIMTLRQAIAILLSCLIYKHSISFLGVVGVVIVFLAIFLRVYCNQRLKAIKRRHAA 457

Query: 178 AEV 180
           A+V
Sbjct: 458 ADV 460

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198422259|ref|XP_002130278.1| PREDICTED: similar to Slc35b2 protein [Ciona intestinalis]

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/178 (52%), Positives = 133/178 (74%), Gaps = 6/178 (3%)

Query: 2   LLFMLSSLDTSDKVGKTT------TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQM 55
           L F     D +  V + T      T SGV+L+  Y+  DSFTSNWQG LF+++K++S+QM
Sbjct: 255 LFFQSGQHDNNVHVSEETYSTLVGTSSGVVLMLGYMMFDSFTSNWQGSLFKTHKMSSVQM 314

Query: 56  MFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKF 115
           MFG NLFSC+FT+ SLL+QGGF ++  FM++   F +  ++LSI SA GQLF+F+TI +F
Sbjct: 315 MFGVNLFSCVFTSCSLLEQGGFIEAAQFMMRHWDFAMHSVVLSICSAVGQLFIFYTISEF 374

Query: 116 GAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKK 173
           GA+VFTIIMTVRQ +AILLSC+IY HP++++G+LGIL+V +A+ L+ Y + RK +LK+
Sbjct: 375 GAVVFTIIMTVRQAIAILLSCVIYGHPVTVMGLLGILVVFLALFLRIYARSRKTTLKQ 432

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156552830|ref|XP_001599843.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Nasonia vitripennis]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/178 (55%), Positives = 122/178 (68%), Gaps = 2/178 (1%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           ML+FML S D   K    TT SGV+LL  Y+  DSFTSNWQ  LF +Y V+S+QMM   N
Sbjct: 265 MLMFMLGSTD--HKNDGATTFSGVLLLGAYMMLDSFTSNWQNALFNAYHVSSIQMMCAVN 322

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFSCL TA SL QQ     SL FM  +P F LDCIL+SI S  GQL++F+TI  FGA+ F
Sbjct: 323 LFSCLLTATSLFQQSSLMYSLMFMTTYPRFILDCILISIFSTTGQLYIFYTISNFGAVTF 382

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQA 178
            I+MTVRQG AILLSC++Y H I+ LG+ G+ +V +AV L+ YC  R  S+KK+  +A
Sbjct: 383 IIMMTVRQGFAILLSCLLYHHYITPLGMFGVFLVFLAVFLRIYCNNRLHSIKKRRAEA 440

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198454329|ref|XP_001359557.2| GA20487 [Drosophila pseudoobscura pseudoobscura] gi|198132746|gb|EAL28705.2| GA20487 [Drosophila pseudoobscura pseudoobscura]

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/174 (55%), Positives = 124/174 (71%), Gaps = 1/174 (0%)

Query: 1   MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           M+ FM  S D S+K    TTL+GV LL+LY+  DSFT+NWQG LF+SY +TSLQMM G N
Sbjct: 278 MIFFMSGSAD-SNKASGVTTLTGVFLLSLYMVFDSFTANWQGSLFKSYGMTSLQMMCGVN 336

Query: 61  LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
           LFS +FT  SL  QGGF  SL F  + P F  D ++LSI SA GQLF++ TI  FG +VF
Sbjct: 337 LFSSIFTGASLSMQGGFMDSLSFATEHPKFVFDMVVLSICSAVGQLFIYHTIDVFGPVVF 396

Query: 121 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKK 174
           TIIMT+RQ +AI+LSC IY H +S LGI G+L+V +A+ L+ YC  R  +++K+
Sbjct: 397 TIIMTLRQAVAIMLSCFIYHHSVSALGIFGVLIVFVAIFLRVYCTQRLRAMRKR 450

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
ZFIN|ZDB-GENE-050213-1	435	slc35b2 "solute carrier family	0.933	0.386	0.549	8.4e-42
FB|FBgn0038524	465	sll "slalom" [Drosophila melan	0.961	0.372	0.5	2.8e-41
UNIPROTKB|F1NC34	431	SLC35B2 "Uncharacterized prote	0.972	0.406	0.508	3.6e-41
MGI|MGI:1921086	431	Slc35b2 "solute carrier family	0.938	0.392	0.520	5.3e-40
RGD|1565318	431	Slc35b2 "solute carrier family	0.938	0.392	0.514	6.8e-40
UNIPROTKB|Q3ZBB0	433	SLC35B2 "Uncharacterized prote	0.972	0.404	0.502	6.1e-39
UNIPROTKB|F1PA99	414	SLC35B2 "Uncharacterized prote	0.944	0.410	0.511	6.1e-39
UNIPROTKB|J9NY30	432	SLC35B2 "Uncharacterized prote	0.944	0.393	0.511	6.1e-39
UNIPROTKB|B4DDM2	299	SLC35B2 "Adenosine 3'-phospho	0.944	0.568	0.505	1.6e-38
UNIPROTKB|F5H7Y9	339	SLC35B2 "Adenosine 3'-phospho	0.944	0.501	0.505	1.6e-38

ZFIN|ZDB-GENE-050213-1 slc35b2 "solute carrier family 35, member B2" [Danio rerio (taxid:7955)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 95/173 (54%), Positives = 120/173 (69%)

Query:     3 LFMLSSLDTSDKVGKT-TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNL 61
             +F+LSS  ++DK   T TT SGV++LA Y+  DSFTSNWQ  LF+ YK++S+QMMFG NL
Sbjct:   257 MFLLSS--STDKHPSTVTTFSGVLILAGYIVFDSFTSNWQDNLFK-YKMSSVQMMFGVNL 313

Query:    62 FSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFT 121
             FSCLFT  SLL+QG F+ SL FM +   F    +LLS+ SA GQLF+FFTI +FGA VFT
Sbjct:   314 FSCLFTVGSLLEQGAFFNSLAFMTRHSEFAFHAVLLSVCSAFGQLFIFFTIAQFGAAVFT 373

Query:   122 IIMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLR-KASLKK 173
             IIMT+RQ LAILLSC +Y HP+S            A+ L+ Y + R K S K+
Sbjct:   374 IIMTLRQALAILLSCFLYGHPVSLTGGLGVGVVFLALFLRIYARSRVKKSTKR 426

GO:0055085 "transmembrane transport" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0001649 "osteoblast differentiation" evidence=IMP

FB|FBgn0038524 sll "slalom" [Drosophila melanogaster (taxid:7227)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 87/174 (50%), Positives = 114/174 (65%)

Query:     1 MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
             M+ FM  S D+S K    TTL+G+ LL++Y+  DSFT+NWQG LF+SY +T LQMM G N
Sbjct:   283 MIFFMSGSSDSS-KASGVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVN 341

Query:    61 LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 120
             LFS +FT  SL  QGGF  SL F  + P F  D ++LS+ SA GQLF++ TI  FG +VF
Sbjct:   342 LFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVF 401

Query:   121 TIIMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKK 174
             TIIMT+RQ +AI+LSC IY H IS            A+ L+ YC  R  +++K+
Sbjct:   402 TIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKR 455

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IDA;NAS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IDA;NAS

GO:0007310 "oocyte dorsal/ventral axis specification" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=NAS;IDA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IMP

UNIPROTKB|F1NC34 SLC35B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 90/177 (50%), Positives = 115/177 (64%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS      V   TT SGV+LLA Y+  DSFTSNWQ  LF +YK++ +QMMFG N+F
Sbjct:   251 MFLLSSAPNRH-VSTVTTFSGVVLLAGYIVFDSFTSNWQDALF-TYKMSPVQMMFGVNVF 308

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +S+HFM +   FT   +LLS+ SA GQLF+F+TI +FGA VFTI
Sbjct:   309 SCLFTVGSLLEQGALLESVHFMARHSEFTAHAVLLSVCSACGQLFIFYTINQFGAAVFTI 368

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKKLNQAE 179
             IMT+RQ  AILLSC+IY H ++            A+ L+ Y + R     KKL   E
Sbjct:   369 IMTLRQAFAILLSCLIYGHTVTVVGGLGIAVVFMALFLRVYARSRMKKRSKKLPPGE 425

GO:0016021 "integral to membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

MGI|MGI:1921086 Slc35b2 "solute carrier family 35, member B2" [Mus musculus (taxid:10090)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 89/171 (52%), Positives = 116/171 (67%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG++LLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct:   252 MFLLSS-GPEPRSSPATTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 309

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F L  +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   310 SCLFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTI 369

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKK 173
             IMT+RQ +AILLSC++Y H ++            A+LL+ Y + RK   KK
Sbjct:   370 IMTLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKK 420

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1565318 Slc35b2 "solute carrier family 35, member B2" [Rattus norvegicus (taxid:10116)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 88/171 (51%), Positives = 116/171 (67%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG++LLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct:   252 MFLLSS-GPEPRSSPATTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 309

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F L  +LLS+ SA GQLF+F+TI +FGA VFTI
Sbjct:   310 SCLFTVGSLLEQGALLEGARFMGRHSEFALHALLLSVCSAFGQLFIFYTIGQFGAAVFTI 369

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKK 173
             IMT+RQ +AILLSC++Y H ++            A+LL+ Y + RK   KK
Sbjct:   370 IMTLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKK 420

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA;ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA;ISO

UNIPROTKB|Q3ZBB0 SLC35B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 89/177 (50%), Positives = 114/177 (64%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS          TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct:   253 MFLLSS-GPEPHSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 310

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   + + FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   311 SCLFTVGSLLEQGALLEGIRFMGRHSEFAAHTLLLSICSACGQLFIFYTIGQFGAAVFTI 370

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKKLNQAE 179
             IMT+RQ  AILLSC++Y H ++            A+LL+ Y + R     KK    E
Sbjct:   371 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAMPVE 427

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PA99 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 88/172 (51%), Positives = 113/172 (65%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct:   234 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 291

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   292 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 351

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKK 174
             IMT+RQ  AILLSC++Y H ++            A+LL+ Y + R     KK
Sbjct:   352 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKK 403

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J9NY30 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 88/172 (51%), Positives = 113/172 (65%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG NLF
Sbjct:   252 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLF 309

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   310 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 369

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKK 174
             IMT+RQ  AILLSC++Y H ++            A+LL+ Y + R     KK
Sbjct:   370 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKK 421

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|B4DDM2 SLC35B2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 1" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 87/172 (50%), Positives = 112/172 (65%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG N F
Sbjct:   119 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNFF 176

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   177 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 236

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKK 174
             IMT+RQ  AILLSC++Y H ++            A+LL+ Y + R     KK
Sbjct:   237 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKK 288

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F5H7Y9 SLC35B2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 1" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 87/172 (50%), Positives = 112/172 (65%)

Query:     3 LFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLF 62
             +F+LSS     +    TTLSG+ILLA Y++ DSFTSNWQ  LF +YK++S+QMMFG N F
Sbjct:   159 MFLLSS-GPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNFF 216

Query:    63 SCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI 122
             SCLFT  SLL+QG   +   FM +   F    +LLSI SA GQLF+F+TI +FGA VFTI
Sbjct:   217 SCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTI 276

Query:   123 IMTVRQGLAILLSCIIYAHPISXXXXXXXXXXXXAVLLQAYCKLRKASLKKK 174
             IMT+RQ  AILLSC++Y H ++            A+LL+ Y + R     KK
Sbjct:   277 IMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKK 328

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R9A1	S35B2_PONAB	No assigned EC number	0.5197	0.9722	0.4050	yes	N/A
Q91ZN5	S35B2_MOUSE	No assigned EC number	0.5438	0.9388	0.3921	yes	N/A
Q8TB61	S35B2_HUMAN	No assigned EC number	0.5197	0.9722	0.4050	yes	N/A
Q9VEI3	S35B2_DROME	No assigned EC number	0.5402	0.9611	0.3720	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	180
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-36

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  128 bits (323), Expect = 1e-36
 Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 3   LFMLSSLDTSDKVGKTTT--LSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 60
           +F L+S   S     TT     G+ LL   L  D+ T N Q  L++ Y   S +MMF ++
Sbjct: 133 IFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSH 192

Query: 61  LFSCLFTAVSLLQQGG--FYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAI 118
           L S  F  + LL       + +  F L+ PS     +L S++   GQ FVF+ I +FGA+
Sbjct: 193 LLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGAL 252

Query: 119 VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKA 169
             T++ T+R+ +++LLS +++ +P++L   LG L+V + + L AY K +KA
Sbjct: 253 TVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYLKKKKA 303

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
KOG1581|consensus	327		100.0
KOG1580|consensus	337		99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
KOG1582|consensus	367		99.94
KOG1583|consensus	330		99.84
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.8
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.78
PLN00411	358	nodulin MtN21 family protein; Provisional	99.76
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.7
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.7
KOG1441|consensus	316		99.67
PRK11689	295	aromatic amino acid exporter; Provisional	99.66
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.65
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.6
KOG1444|consensus	314		99.57
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.57
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.56
PRK11272	292	putative DMT superfamily transporter inner membran	99.56
PRK15430	296	putative chloramphenical resistance permease RarD;	99.49
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.44
KOG1442|consensus	347		99.38
COG2510	140	Predicted membrane protein [Function unknown]	99.35
PRK15430	296	putative chloramphenical resistance permease RarD;	99.31
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.26
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.24
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.23
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.2
KOG2234|consensus	345		99.17
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.11
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.06
KOG4510|consensus	346		99.0
KOG2765|consensus	416		98.95
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.92
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.89
PLN00411	358	nodulin MtN21 family protein; Provisional	98.86
KOG1443|consensus	349		98.85
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.85
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.74
COG2962	293	RarD Predicted permeases [General function predict	98.74
COG2962	293	RarD Predicted permeases [General function predict	98.74
PRK11272	292	putative DMT superfamily transporter inner membran	98.72
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.71
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.62
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.61
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.58
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.56
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.35
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.25
KOG3912|consensus	372		98.24
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.19
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.16
PRK13499	345	rhamnose-proton symporter; Provisional	98.11
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.06
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.0
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.97
KOG2766|consensus	336		97.95
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.86
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.81
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.77
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.74
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.72
PRK11431	105	multidrug efflux system protein; Provisional	97.57
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.54
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.42
COG2076	106	EmrE Membrane transporters of cations and cationic	97.33
KOG2234|consensus	345		97.24
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.94
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.58
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.45
KOG1581|consensus	327		96.07
KOG1441|consensus	316		95.85
KOG4510|consensus	346		95.65
KOG3912|consensus	372		95.01
KOG4314|consensus	290		94.66
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.63
PRK13499	345	rhamnose-proton symporter; Provisional	93.05
KOG1580|consensus	337		92.58
KOG1444|consensus	314		92.25
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	90.76
KOG4314|consensus	290		90.72
PRK02237	109	hypothetical protein; Provisional	90.26
KOG2765|consensus	416		90.22
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	88.8
KOG2922|consensus	335		88.73
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	87.83
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	84.71
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	84.6
COG3086	150	RseC Positive regulator of sigma E activity [Signa	84.38
PF04971	68	Lysis_S: Lysis protein S ; InterPro: IPR007054 The	82.85
PF15099	129	PIRT: Phosphoinositide-interacting protein family	82.62
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	82.56
PF07444	84	Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR01	80.87

>KOG1581|consensus

Probab=100.00  E-value=1.3e-33  Score=226.57  Aligned_cols=175  Identities=40%  Similarity=0.690  Sum_probs=161.7

Q ss_pred             CEEeeccCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhh
Q psy665            1 MLLFMLSSLDT-SDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQ   79 (180)
Q Consensus         1 ~~~f~~~~~~~-~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~   79 (180)
                      |.+|++.++++ +++....+++.|+.++..++++||++++.||+++++++++++++|+|+|+++++.....++..|.+.+
T Consensus       150 vsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~  229 (327)
T KOG1581|consen  150 VSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLP  229 (327)
T ss_pred             eeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCch
Confidence            56899986544 34445579999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHH
Q psy665           80 SLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVL  159 (180)
Q Consensus        80 ~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~  159 (180)
                      ++.|...||+.++|+++++.|+++||.+++..++++||++.+++++.||++++++|.+.|||++++.||.|..+|++|++
T Consensus       230 av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~  309 (327)
T KOG1581|consen  230 AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF  309 (327)
T ss_pred             HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhhhcc
Q psy665          160 LQAYCKLRKASLKKKL  175 (180)
Q Consensus       160 ~~~~~k~~~k~~~~~~  175 (180)
                      +..+.|+|++.++||.
T Consensus       310 l~~~~k~~~~~~~~k~  325 (327)
T KOG1581|consen  310 LEILLKKKKNQPRKKK  325 (327)
T ss_pred             HHHHHHHhccCccccc
Confidence            9999987755444443

>KOG1580|consensus

Probab=99.97  E-value=6.8e-32  Score=210.45  Aligned_cols=166  Identities=31%  Similarity=0.463  Sum_probs=154.8

Q ss_pred             CEEeeccCCCCCCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhH
Q psy665            1 MLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQS   80 (180)
Q Consensus         1 ~~~f~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~   80 (180)
                      |++||+++.+.. +.|++...+|-++++.|+-+|++++..|||+.+.|..+..+||+|+|++++.++...++++||+.+.
T Consensus       152 ValFmYK~~Kv~-g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF  230 (337)
T KOG1580|consen  152 VALFMYKENKVG-GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEF  230 (337)
T ss_pred             HHHhhccccccC-CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHH
Confidence            579999854332 5677788999999999999999999999999999988999999999999999999999999999999


Q ss_pred             hhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q psy665           81 LHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL  160 (180)
Q Consensus        81 ~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~  160 (180)
                      +.|..+||..|+++.++++++.+||.+++..+..+||++++++++.||.++++.|+++|+||+++.||+|..+|+.++..
T Consensus       231 ~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  231 FYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh
Q psy665          161 QAYCKLR  167 (180)
Q Consensus       161 ~~~~k~~  167 (180)
                      .....++
T Consensus       311 D~~~GK~  317 (337)
T KOG1580|consen  311 DVVDGKK  317 (337)
T ss_pred             HhhcCCc
Confidence            8765443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=7.5e-29  Score=204.33  Aligned_cols=169  Identities=38%  Similarity=0.632  Sum_probs=152.8

Q ss_pred             CEEeeccCCCCC--CCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHH--hCc
Q psy665            1 MLLFMLSSLDTS--DKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQ--QGG   76 (180)
Q Consensus         1 ~~~f~~~~~~~~--~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~--~g~   76 (180)
                      +++|+++|.+++  ++.+...+..|+++++.|+++||+++++|||++++|+.+++|+++|+|+++++...+..+.  .+|
T Consensus       131 v~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~  210 (303)
T PF08449_consen  131 VAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGE  210 (303)
T ss_pred             HheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            467888876443  2223234456999999999999999999999999999999999999999999999988887  889


Q ss_pred             hhhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q psy665           77 FYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLM  156 (180)
Q Consensus        77 ~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~  156 (180)
                      +.+...+..+||+.+.+++..+++++++|.+++.+++++||++.++++++||++++++|+++|||++++.||+|.++++.
T Consensus       211 ~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~  290 (303)
T PF08449_consen  211 FRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFA  290 (303)
T ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHH
Confidence            98999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy665          157 AVLLQAYCKLRKA  169 (180)
Q Consensus       157 Gv~~~~~~k~~~k  169 (180)
                      |+.++.+.|+|+|
T Consensus       291 g~~~~~~~~~k~~  303 (303)
T PF08449_consen  291 GIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHhhccCC
Confidence            9999999876543

; GO: 0055085 transmembrane transport

>KOG1582|consensus

Probab=99.94  E-value=5.6e-27  Score=186.07  Aligned_cols=160  Identities=23%  Similarity=0.387  Sum_probs=153.7

Q ss_pred             EEeeccCCCCCCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHh
Q psy665            2 LLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSL   81 (180)
Q Consensus         2 ~~f~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~   81 (180)
                      ++|+|+|+.    .+|+|++.|+.++..++++||+.+++|||.++.++.+..||.+|...+|.++.+.....+||+..++
T Consensus       174 i~FTLADs~----~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~  249 (367)
T KOG1582|consen  174 IWFTLADSQ----TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAW  249 (367)
T ss_pred             Hhhhhcccc----cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhh
Confidence            579999994    6899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhcChh-hHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q psy665           82 HFMLQFPS-FTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL  160 (180)
Q Consensus        82 ~~~~~~p~-~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~  160 (180)
                      .+...||. ...+.++.++.+++|+.++...++.+||++++.++|.||.+++++|+++|.+|+|.++..|..+|+.|+++
T Consensus       250 ~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~L  329 (367)
T KOG1582|consen  250 TFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYL  329 (367)
T ss_pred             HHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHh
Confidence            99999997 77889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy665          161 QAYCK  165 (180)
Q Consensus       161 ~~~~k  165 (180)
                      ..+.|
T Consensus       330 n~ysk  334 (367)
T KOG1582|consen  330 NMYSK  334 (367)
T ss_pred             hcccC
Confidence            99877

>KOG1583|consensus

Probab=99.84  E-value=1.8e-20  Score=149.33  Aligned_cols=149  Identities=17%  Similarity=0.236  Sum_probs=121.9

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHh------------h
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFM------------L   85 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~------------~   85 (180)
                      .-+.+|+.++..+++..|..+++||+.+++|+.++-|.+||+++.+.+..+.   .-+|+.+.+.-.            .
T Consensus       160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf---~~~div~~~~~~~~se~~~~p~~g~  236 (330)
T KOG1583|consen  160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLF---MGDDIVSHWRLAFKSESYLIPLLGF  236 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHH---hcchHHHHHHHHhcCcceeccccCc
Confidence            3457999999999999999999999999999999999999999998887553   223333322211            1


Q ss_pred             cChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665           86 QFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus        86 ~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      .-|..|++++...+.++.+.--++..-.++++++++++.++||.+|.++|++.|+||+|++||+|.++|+.|-.+++-..
T Consensus       237 ~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  237 KVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            13677888877666666666667777789999999999999999999999999999999999999999999998887655


Q ss_pred             Hhhh
Q psy665          166 LRKA  169 (180)
Q Consensus       166 ~~~k  169 (180)
                      .+.|
T Consensus       317 ~~~~  320 (330)
T KOG1583|consen  317 NHPK  320 (330)
T ss_pred             cCcc
Confidence            4443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.80  E-value=2.1e-18  Score=128.08  Aligned_cols=141  Identities=25%  Similarity=0.344  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhh-----CCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHh--hc-----Chhh
Q psy665           23 GVILLALYLSCDSFTSNWQGVLFES-----YKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFM--LQ-----FPSF   90 (180)
Q Consensus        23 G~~l~l~s~~~~a~~~~~~~~l~~~-----~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~--~~-----~p~~   90 (180)
                      |.++.+.|.++.|++.+++|+++++     .+.++.++++|+++.+++.++|..+..++........  ..     .++.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999988     6899999999999999999998876554332111111  11     3456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           91 TLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        91 ~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      +..++..++++.+.+++.+.++++++|++.++.+.+|.+..+++|+++|||++|+.+++|+++.+.|+..|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            6677778899999999999999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.78  E-value=5.8e-18  Score=139.25  Aligned_cols=151  Identities=10%  Similarity=0.069  Sum_probs=116.0

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHh-hHhh----cChhh
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSL-HFML----QFPSF   90 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~-~~~~----~~p~~   90 (180)
                      +.+++..|+++.++|.++++++.++.+|..++++.++.++++|++.++.+.+.|.....++..... .+..    ..+..
T Consensus       139 ~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (302)
T TIGR00817       139 ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTK  218 (302)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchH
Confidence            345678899999999999999999999988755568999999999999999888776443211110 1101    11111


Q ss_pred             HHH-HHHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           91 TLD-CILLSI-SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        91 ~~~-l~~~~~-~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      ... .+..+. +....+.+.+.++++.||++.++.++++|++++++|+++|||++++.+++|+++++.|++++...|+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       219 IYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            222 222233 4445556777899999999999999999999999999999999999999999999999999986543

specificities overlap.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.76  E-value=7.5e-17  Score=135.88  Aligned_cols=146  Identities=13%  Similarity=0.170  Sum_probs=111.3

Q ss_pred             cHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHH-HHHhCc-hhhHhhHh-hcChhhHHHHHH
Q psy665           20 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVS-LLQQGG-FYQSLHFM-LQFPSFTLDCIL   96 (180)
Q Consensus        20 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~-~~~~g~-~~~~~~~~-~~~p~~~~~l~~   96 (180)
                      .++|++++++|+++||++.++|+|..++|. +....+++...++.+...+. ...+++ ..   .+. ..++. ...+++
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~-~~~i~y  261 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPS---VWIIHFDIT-LITIVT  261 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcc---cceeccchH-HHHHHH
Confidence            477999999999999999999999888773 23455666666665555433 333321 11   111 11222 223455


Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy665           97 LSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAS  170 (180)
Q Consensus        97 ~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~  170 (180)
                      .++++.+++.++.+++++.||..++++.++.|++++++|++++||++++.+++|+++|+.|+++..+.|+++-+
T Consensus       262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~  335 (358)
T PLN00411        262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK  335 (358)
T ss_pred             HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            56667778888999999999999999999999999999999999999999999999999999999887666543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.70  E-value=1.4e-15  Score=124.85  Aligned_cols=145  Identities=15%  Similarity=0.084  Sum_probs=112.8

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      .+..|+++.+++.+++|.+.+..||..+++  ++... .+...++.+...+.....+..      ...++..|..+++.+
T Consensus       145 ~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lg  215 (293)
T PRK10532        145 VDLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVA  215 (293)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHH
Confidence            457899999999999999999999986654  55554 455667776666655543210      112344455556677


Q ss_pred             HH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy665           99 IS-SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLK  172 (180)
Q Consensus        99 ~~-~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~~  172 (180)
                      ++ +.+++.++++++++.+|..++++.+++|++++++|+++|||++++.|++|+++++.|+..+.+..+|+.|-|
T Consensus       216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~  290 (293)
T PRK10532        216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIK  290 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            55 667777889999999999999999999999999999999999999999999999999999977654443333

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.70  E-value=1.2e-15  Score=128.32  Aligned_cols=149  Identities=16%  Similarity=0.204  Sum_probs=115.4

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCC-----CChhhHHHHhHHHHHHHHHHHHH-HhCc-hhhHhhH----h
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYK-----VTSLQMMFGTNLFSCLFTAVSLL-QQGG-FYQSLHF----M   84 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-----~~~~~~~~y~~~~~~i~~~~~~~-~~g~-~~~~~~~----~   84 (180)
                      |.++++.|+++.++|.+++++++++.||++++++     .++.++..|..+++.++++|... .++. .......    .
T Consensus       188 ~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~  267 (350)
T PTZ00343        188 ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANM  267 (350)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcc
Confidence            4567889999999999999999999999887653     56777888889999999998765 3431 1111100    0


Q ss_pred             hcC--hhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           85 LQF--PSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        85 ~~~--p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      ...  +..+..++..+++.++-+.+.+.++++.+|++.++.++++|++++++|+++|||++|+.|++|++++++|+++|+
T Consensus       268 ~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        268 TNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            000  111222333445566666677789999999999999999999999999999999999999999999999999998


Q ss_pred             HH
Q psy665          163 YC  164 (180)
Q Consensus       163 ~~  164 (180)
                      +.
T Consensus       348 ~~  349 (350)
T PTZ00343        348 LF  349 (350)
T ss_pred             hc
Confidence            65

>KOG1441|consensus

Probab=99.67  E-value=1.4e-16  Score=131.35  Aligned_cols=155  Identities=20%  Similarity=0.273  Sum_probs=130.3

Q ss_pred             CCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHh--hCCCChhhHHHHhHHHHHHHHH-HHHHH-hCchhhHhhHhhcChh
Q psy665           14 KVGKTTTLSGVILLALYLSCDSFTSNWQGVLFE--SYKVTSLQMMFGTNLFSCLFTA-VSLLQ-QGGFYQSLHFMLQFPS   89 (180)
Q Consensus        14 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~--~~~~~~~~~~~y~~~~~~i~~~-~~~~~-~g~~~~~~~~~~~~p~   89 (180)
                      ..|.++++.|.....++.+..+..+++++++++  +++.++.+++.|+..++.+.++ |.... +|+.. . .+ ...+.
T Consensus       155 ~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~-~~~~~  231 (316)
T KOG1441|consen  155 VTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GF-LTAPW  231 (316)
T ss_pred             eccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-ee-ecccc
Confidence            347789999999999999999999999999995  5689999999999999999999 76543 34322 1 11 11111


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHh
Q psy665           90 --FTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLR  167 (180)
Q Consensus        90 --~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~  167 (180)
                        ....+++.++|.+..|...+.++++++|++.++.+.++.++.++.|+++|+||+|+.+..|+++.+.|+++|.+.|.|
T Consensus       232 ~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  232 FVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence              123345556999999999999999999999999999999999999999999999999999999999999999998877


Q ss_pred             hhhh
Q psy665          168 KASL  171 (180)
Q Consensus       168 ~k~~  171 (180)
                      +|++
T Consensus       312 ~~~~  315 (316)
T KOG1441|consen  312 EKKG  315 (316)
T ss_pred             hhcc
Confidence            6654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.66  E-value=6.1e-15  Score=121.16  Aligned_cols=137  Identities=12%  Similarity=0.034  Sum_probs=106.6

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      ++..|+++++++.+++|++.++.||..+++  ++...++   ..+.+...+....+++.     ....+++.|..+++.+
T Consensus       153 ~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~~---~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~l~~~~  222 (295)
T PRK11689        153 SNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLFF---ILTALALWIKYFLSPQP-----AMVFSLPAIIKLLLAA  222 (295)
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHHH---HHHHHHHHHHHHHhcCc-----cccCCHHHHHHHHHHH
Confidence            456799999999999999999999976544  4444322   22223333322323321     1223456677777777


Q ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      +++.+++.++++++++.||..++++.+++|+++++++++++||++++.+++|+++++.|+.+..+.+
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            8889999999999999999999999999999999999999999999999999999999998886654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.65  E-value=1.7e-14  Score=118.70  Aligned_cols=148  Identities=7%  Similarity=0.079  Sum_probs=109.8

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCC-CChhhHHHHhHHHHHHHHHHHH-HHhCchhhHhhHhhcChhhHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYK-VTSLQMMFGTNLFSCLFTAVSL-LQQGGFYQSLHFMLQFPSFTLDCIL   96 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-~~~~~~~~y~~~~~~i~~~~~~-~~~g~~~~~~~~~~~~p~~~~~l~~   96 (180)
                      .+..|+++.+.+.++++.+.++++|..++++ .......++...++.+...+.. ..+++......+...++..|..+++
T Consensus       140 ~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        140 VAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHH
Confidence            4568999999999999999999999765442 2223444555444443333222 2233211111122345567778888


Q ss_pred             HHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           97 LSI-SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        97 ~~~-~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      .++ ++.+++.++++++++.++..++++..++|++++++|++++||++++.+++|+++++.|+++..+.++
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            875 4677888888999999999999999999999999999999999999999999999999998877654

>TIGR00803 nst UDP-galactose transporter

Probab=99.60  E-value=8.2e-15  Score=115.67  Aligned_cols=141  Identities=16%  Similarity=0.213  Sum_probs=102.2

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHh-CchhhHhhHhhcChhhHHHHHH
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFMLQFPSFTLDCIL   96 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~p~~~~~l~~   96 (180)
                      ...+.|..+++.++++|++.++++|+.+|+++.+.+.....+.+++.+......... ++......+...+|...+   .
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  157 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW---I  157 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH---H
Confidence            467899999999999999999999998876543333334444444443322222221 222111122223343332   2


Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           97 LSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        97 ~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      ..++++.++.++.+++|+.|+.+.+..+++||+++.++|+++|||++++.+|+|+.+++.|+++|
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33567888999999999999999999999999999999999999999999999999999998654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1444|consensus

Probab=99.57  E-value=1.9e-14  Score=117.26  Aligned_cols=162  Identities=17%  Similarity=0.162  Sum_probs=141.3

Q ss_pred             CCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHh---hcChhhH
Q psy665           15 VGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFM---LQFPSFT   91 (180)
Q Consensus        15 ~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~---~~~p~~~   91 (180)
                      .+-+++..|+.++..++++.+.+.+..|+-.+.-+.+.+++++|.|+++++...+.....||+. +..+.   ...+..|
T Consensus       150 ~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~  228 (314)
T KOG1444|consen  150 TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVL  228 (314)
T ss_pred             ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHH
Confidence            4567889999999999999999999999988776789999999999999999998888889876 43332   1234556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy665           92 LDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASL  171 (180)
Q Consensus        92 ~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~  171 (180)
                      ..+.+.++++..-.++.+++.+..+|++.++++...+..+.+..+++++++.++...+|..+-+.|...|++.+.|+|+.
T Consensus       229 ~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  229 VVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            67788889999999999999999999999999988899999999999999999999999999999999999999888877


Q ss_pred             hhccCc
Q psy665          172 KKKLNQ  177 (180)
Q Consensus       172 ~~~~~~  177 (180)
                      +++++|
T Consensus       309 ~~~l~~  314 (314)
T KOG1444|consen  309 PPKLDQ  314 (314)
T ss_pred             CCcccC
Confidence            766654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.57  E-value=1.9e-13  Score=109.54  Aligned_cols=135  Identities=15%  Similarity=0.042  Sum_probs=110.9

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHH
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILL   97 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~   97 (180)
                      +.+..|+.+.+.+.++++.+.++.+|..++++.++.....+...++.+...+.....++.      ...++..|..++..
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~  197 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN------PQALSLQWGALLYL  197 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC------CCcchHHHHHHHHH
Confidence            456789999999999999999999998876654455555567778888877776655432      11234556666666


Q ss_pred             HHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHH
Q psy665           98 SIS-SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAV  158 (180)
Q Consensus        98 ~~~-~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv  158 (180)
                      +++ +.+++.++++++++.|+..++++.+++|+++++++++++||++++.+++|+++++.|+
T Consensus       198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            655 6789999999999999999999999999999999999999999999999999999986

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.56  E-value=5.1e-14  Score=117.32  Aligned_cols=160  Identities=12%  Similarity=0.119  Sum_probs=126.6

Q ss_pred             eeccCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHH-HhCchhhHh
Q psy665            4 FMLSSLDT-SDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLL-QQGGFYQSL   81 (180)
Q Consensus         4 f~~~~~~~-~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~-~~g~~~~~~   81 (180)
                      -.++|..+ +++.+.++.+.|+++++.+..+.|++++.+|++.+++  +..+......+++++++.+... ++.+-.+. 
T Consensus       149 v~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~-  225 (334)
T PF06027_consen  149 VVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERSGIES-  225 (334)
T ss_pred             eeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehhhhhc-
Confidence            34556433 2234557889999999999999999999999998865  7899999999999998886553 34321111 


Q ss_pred             hHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           82 HFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        82 ~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                        ...+++.+...+.++++.++-+.++-..++..+|+..++-..+..+.+++.++++||+++++..++|.++|+.|+.+|
T Consensus       226 --~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy  303 (334)
T PF06027_consen  226 --IHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY  303 (334)
T ss_pred             --cCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence              122345555666777777777777778899999999999998999999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy665          162 AYCKLRK  168 (180)
Q Consensus       162 ~~~k~~~  168 (180)
                      ...+++.
T Consensus       304 ~~~~~~~  310 (334)
T PF06027_consen  304 NLAESPE  310 (334)
T ss_pred             EccCCcc
Confidence            8765443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.56  E-value=3.5e-13  Score=110.52  Aligned_cols=141  Identities=18%  Similarity=0.122  Sum_probs=112.2

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      .+..|+++.+++.+++|.+.++++|..++   ++.....|...++.+...+.....++..    ....+++.|..+.+.+
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~  219 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLA  219 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHH
Confidence            45689999999999999999999996432   2344566777777776666554443210    0123456677777777


Q ss_pred             HH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           99 IS-SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        99 ~~-~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      +. +.++..++++++++.++...+++..++|+++.++|++++||++++.+++|+++++.|+++..+.++
T Consensus       220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            65 678888999999999999999999999999999999999999999999999999999999876543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.49  E-value=1.5e-12  Score=106.98  Aligned_cols=142  Identities=11%  Similarity=0.021  Sum_probs=96.9

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhh-HHHHHHHHHHHHH
Q psy665           25 ILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSF-TLDCILLSISSAA  103 (180)
Q Consensus        25 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~-~~~l~~~~~~~~~  103 (180)
                      .+.+++.+++|.+.+.++|..++...+....+.|...++.+...+.  .....    ....++|.. +..++..++++.+
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~g~~t~i  225 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSLNLLLIAAGIVTTV  225 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHHHHHHHHHHHHHHH
Confidence            3567788999999988888643211122333333333333322111  11110    001223332 2334445667889


Q ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy665          104 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLK  172 (180)
Q Consensus       104 g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~~  172 (180)
                      ++.++++++++.||..++++.+++|++++++|++++||++++.+++|+++++.|+.+.........|||
T Consensus       226 ~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~~~~  294 (296)
T PRK15430        226 PLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK  294 (296)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999999888876655444443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.44  E-value=2e-12  Score=91.78  Aligned_cols=124  Identities=20%  Similarity=0.279  Sum_probs=102.2

Q ss_pred             HhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHH-HHHHHHHHHH
Q psy665           32 SCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS-SAAGQLFVFF  110 (180)
Q Consensus        32 ~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~-~~~g~~~~~~  110 (180)
                      ++||.+.++.++..++  .|+....++...++.+ .++.....++..    ....+++.+......+++ +.+++.+.++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            4789999999998876  5999999999999988 665554433211    123444556666666655 6999999999


Q ss_pred             HHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665          111 TIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus       111 ~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      ++++.++...+++..+.|+++.++++++++|++++.+++|+++++.|+.+..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442|consensus

Probab=99.38  E-value=2.6e-13  Score=108.52  Aligned_cols=156  Identities=16%  Similarity=0.078  Sum_probs=137.6

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhc-ChhhHHHH
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQ-FPSFTLDC   94 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~p~~~~~l   94 (180)
                      +...++.|+++...|.++-|+..++.+|.+...+...|.+++|+|..+.+..+|.++..||+.+.+.|.+. ....|..+
T Consensus       179 ~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  179 TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILM  258 (347)
T ss_pred             cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHH
Confidence            45688999999999999999999999987766667889999999999999999999999998766554221 33456677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy665           95 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASL  171 (180)
Q Consensus        95 ~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~  171 (180)
                      .+.+++++.-++...+-||-++|+++.+-.+.|-+...++++.+++|..+..-|-|-.+|+.|...|.+.|+++++|
T Consensus       259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            77789999999999999999999999999999999999999999999999999999999999999999998877654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.35  E-value=1e-11  Score=88.98  Aligned_cols=133  Identities=20%  Similarity=0.186  Sum_probs=114.5

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHH
Q psy665           24 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA  103 (180)
Q Consensus        24 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~  103 (180)
                      .++.+.|.+++++..++.|.=++  +.||..-++.-+.+..+++.......|+....   ..-+|..|..++..++.+.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~---~~~~~k~~lflilSGla~gl   79 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG---GEIGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc---cccCcceehhhhHHHHHHHH
Confidence            45678888999999988777554  56888888888888888888888888864211   12367889999999999999


Q ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665          104 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus       104 g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      +-+++|++++...+..++++.-..+++++++|++++||++|.++|+|+.++..|..+.
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            9999999999999999999999999999999999999999999999999999997653

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.31  E-value=4.6e-10  Score=92.27  Aligned_cols=142  Identities=13%  Similarity=0.157  Sum_probs=111.0

Q ss_pred             CCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHH
Q psy665           17 KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCIL   96 (180)
Q Consensus        17 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~   96 (180)
                      .++...|+++++.+.++|+...++.+.. .  +.++.++.++-.+++.+...+.....++..+... ...++..+...+.
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   78 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKT-LIQTPQKIFMLAV   78 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HHcCHHHHHHHHH
Confidence            3466789999999999999999888553 3  5799999999999998877766554443211111 0123333333333


Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           97 LSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        97 ~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      -+++....+.+.++++++.++..+++...+.|+++.++++++++|++++.+|+|+++.+.|+.+..
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            334556678889999999999999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.26  E-value=3.1e-11  Score=98.47  Aligned_cols=135  Identities=10%  Similarity=0.083  Sum_probs=92.7

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHH-HHHHHH---hCchhhHhhHhhcChhhHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFT-AVSLLQ---QGGFYQSLHFMLQFPSFTLDC   94 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~-~~~~~~---~g~~~~~~~~~~~~p~~~~~l   94 (180)
                      .+..|+.+.+++.++++++.+..||..++.  ++.....+...++.+.. .+....   .++.    . ....+..+..+
T Consensus       141 ~~~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~  213 (281)
T TIGR03340       141 HRRKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR----S-MFPYARQILPS  213 (281)
T ss_pred             cchhHHHHHHHHHHHHHHhhhhccccccch--hcccccHHHHHHHHHHHHHHHHHHHHHHhcc----c-hhhhHHHHHHH
Confidence            345788899999999999998877754322  22211111122233222 222211   1110    0 11112223343


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q psy665           95 ILL-SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL  160 (180)
Q Consensus        95 ~~~-~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~  160 (180)
                      +.. ++++.+++.++++++++.|+..++++.++.|++++++|++++||++++.+++|+++++.|+.+
T Consensus       214 ~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       214 ATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            333 467888999999999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.24  E-value=7e-10  Score=89.26  Aligned_cols=135  Identities=18%  Similarity=0.226  Sum_probs=101.5

Q ss_pred             cHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHH-hHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           20 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFG-TNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        20 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y-~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      +..|+++.+.+.+++|++.+.++++. +  .++.....+ ..........+......      . .......|..+...+
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~g  221 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-R--LGPVTLALLLQLLLALLLLLLFFLSGF------G-APILSRAWLLLLYLG  221 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHHhccc------c-ccCCHHHHHHHHHHH
Confidence            67999999999999999999999987 3  355555552 22211111111111110      0 122334566677777


Q ss_pred             HHHH-HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHH
Q psy665           99 ISSA-AGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus        99 ~~~~-~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      +++. +++.++++++++.++...+++..++|+.++++++++++|++++.+++|+++++.|+.+....
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         222 VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            6655 79999999999999999999999999999999999999999999999999999999887665

>TIGR00688 rarD rarD protein

Probab=99.23  E-value=1.2e-09  Score=87.72  Aligned_cols=138  Identities=9%  Similarity=0.137  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhh-cCh-hhHHHHHHHHH
Q psy665           22 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFML-QFP-SFTLDCILLSI   99 (180)
Q Consensus        22 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~-~~p-~~~~~l~~~~~   99 (180)
                      .|.++++++.++|+...++.|. ..  +.++.++.++-.+++++.+.+.....++..+...... .+. +.+..+...++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            3899999999999999999886 33  4799999999999999887776654443211111111 111 22334555666


Q ss_pred             HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665          100 SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus       100 ~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      +....+.+.+.++++.++..+++...+.|+++.+++.++++|++++++|+|.++.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            777888999999999999999999999999999999999999999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.20  E-value=8.2e-11  Score=91.99  Aligned_cols=152  Identities=11%  Similarity=0.083  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHH
Q psy665           22 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS  101 (180)
Q Consensus        22 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~  101 (180)
                      -|++++..+|+..+.+-...+|..+--+....+.|||.|+++.+.++...+...|....--.-...++....++..++|+
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            58889999999998888777665543334558999999999999988766554443211000112245555677788999


Q ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy665          102 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKK  173 (180)
Q Consensus       102 ~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~~~  173 (180)
                      +.-.++.-|+++-.++++.++++-+.|....+.|.++|++|.+.+.+..+.+=+.+..+|...|+++++++|
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            888899999999999999999999999999999999999999999999999999999999988766555443

>KOG2234|consensus

Probab=99.17  E-value=1.6e-09  Score=89.69  Aligned_cols=150  Identities=17%  Similarity=0.262  Sum_probs=120.1

Q ss_pred             CCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHh-CchhhHhhHhhcC-hhhHH
Q psy665           15 VGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFMLQF-PSFTL   92 (180)
Q Consensus        15 ~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~-p~~~~   92 (180)
                      ....+...|...++.+|+..|+.+++.||++|+.+.+.|-....+..+|.++.+...+.+ ++-.....++..+ ...|.
T Consensus       176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~  255 (345)
T KOG2234|consen  176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWL  255 (345)
T ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHH
Confidence            345688999999999999999999999999998888889888889999999988777654 2211011122221 12222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q psy665           93 DCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK  168 (180)
Q Consensus        93 ~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~  168 (180)
                      .    -+..++|.+++-..+|+.+...-.-.+.+..+++.+.|+.+|+.++|....+|+.+|+.++.+|...+.+.
T Consensus       256 v----Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  256 V----VLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             H----HHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            2    23567788888899999999999999999999999999999999999999999999999999998655543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.11  E-value=3.1e-09  Score=86.64  Aligned_cols=133  Identities=11%  Similarity=0.020  Sum_probs=101.0

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHH
Q psy665           24 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA  103 (180)
Q Consensus        24 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~  103 (180)
                      +++.+.+.++++...+..||..++.  ++  ..+|.+..+.+...|.......   ...+...+.+.|..++..++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLA---QVGWSRLPATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhcc---cCCCCCcchhhHHHHHHHHHHHHH
Confidence            4677889999999999988876542  33  4566666777777666553211   011222223334445555667788


Q ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          104 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       104 g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      .+.+.++++++.++...+++.+..|+++.++++++++|++++++|+|.++++.|+.+...
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            889999999999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.06  E-value=5.4e-09  Score=83.97  Aligned_cols=134  Identities=22%  Similarity=0.245  Sum_probs=106.4

Q ss_pred             CCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHh-CchhhHhhHhh-cChhhHHHH
Q psy665           17 KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFML-QFPSFTLDC   94 (180)
Q Consensus        17 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~-g~~~~~~~~~~-~~p~~~~~l   94 (180)
                      ......|++++++++++.|+.+++.||++|+.+.|.+.......++|.+..++..... ++-.....++. -++..|   
T Consensus       109 ~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~---  185 (244)
T PF04142_consen  109 NQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVW---  185 (244)
T ss_pred             cchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHH---
Confidence            3456899999999999999999999999999888999999999999999888776443 21101111111 112222   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHH
Q psy665           95 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMV  154 (180)
Q Consensus        95 ~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv  154 (180)
                       ...++.+++.+.+-..+|+.|...-...+.+..+++.++|+++|+.+++....+|+.+|
T Consensus       186 -~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  186 -IVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             -HHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence             22346777888899999999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG4510|consensus

Probab=99.00  E-value=4.7e-10  Score=89.85  Aligned_cols=155  Identities=10%  Similarity=0.097  Sum_probs=122.5

Q ss_pred             eeccCCCCCC-CCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhh
Q psy665            4 FMLSSLDTSD-KVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLH   82 (180)
Q Consensus         4 f~~~~~~~~~-~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~   82 (180)
                      |.++|.++.+ ....+.+..|.+..+.+.+..|-.+++-+++-|+  .+..-.+.|...++++..++.....|++    .
T Consensus       172 FlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~----~  245 (346)
T KOG4510|consen  172 FLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAV----Q  245 (346)
T ss_pred             cccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhccce----e
Confidence            5566654421 1122456778888999999989889888888664  3666677788888999888877666643    2


Q ss_pred             HhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           83 FMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        83 ~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                       +++....|+..+.+++.++++|++...++++=-|...++.++...+++.+.-+++|+|-+|++.|.|+++|+++.....
T Consensus       246 -lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  246 -LPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             -cCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence             3444566777888899999999999999888777778899999999999999999999999999999999999988776


Q ss_pred             HHH
Q psy665          163 YCK  165 (180)
Q Consensus       163 ~~k  165 (180)
                      ..|
T Consensus       325 ~~k  327 (346)
T KOG4510|consen  325 LKK  327 (346)
T ss_pred             HHH
Confidence            543

>KOG2765|consensus

Probab=98.95  E-value=4.8e-09  Score=87.42  Aligned_cols=170  Identities=14%  Similarity=0.102  Sum_probs=126.2

Q ss_pred             EEeeccCCCCCCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhC--CCChhhHHHHhHHHHHHHHHHHHHHhCchhh
Q psy665            2 LLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESY--KVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQ   79 (180)
Q Consensus         2 ~~f~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~--~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~   79 (180)
                      ++=+.+|++..++.+++..+.|.++.+.+.+..|.|.++-+|-..++  +.+...+.-|..++..+++-|.++.-... .
T Consensus       227 iiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~  305 (416)
T KOG2765|consen  227 IIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-G  305 (416)
T ss_pred             EEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-c
Confidence            44556777666667778889999999999999999999998866655  45666666677777777776665432111 0


Q ss_pred             HhhHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHH
Q psy665           80 SLHFMLQFPSFTLDCILLS-ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAV  158 (180)
Q Consensus        80 ~~~~~~~~p~~~~~l~~~~-~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv  158 (180)
                      ...|-.++......+++.+ +.+++.-+++.++.-.++|+++++-.++....+++..+++=|+++++.+++|.+.|+.|.
T Consensus       306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F  385 (416)
T KOG2765|consen  306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF  385 (416)
T ss_pred             cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            1112122222222333333 557888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhh
Q psy665          159 LLQAYCKLRKASLK  172 (180)
Q Consensus       159 ~~~~~~k~~~k~~~  172 (180)
                      ....+.....++.+
T Consensus       386 v~vn~~~~~~~~~~  399 (416)
T KOG2765|consen  386 VIVNISSENSKKDP  399 (416)
T ss_pred             hheecccccccccc
Confidence            98877654444433

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.94  E-value=3.4e-08  Score=81.13  Aligned_cols=131  Identities=15%  Similarity=0.157  Sum_probs=98.2

Q ss_pred             cHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHH----HHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHH
Q psy665           20 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNL----FSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCI   95 (180)
Q Consensus        20 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~----~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~   95 (180)
                      ...|+++.+.|.++.+.+....++.    +.++.+..+....    .+++...+. . ..+     .+   .++.++..+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~-----~~---~~~~~~~~~  215 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-I-LAK-----PL---KKYAILLNI  215 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-h-ccc-----ch---HHHHHHHHH
Confidence            4779999999999999999888865    2477777444332    222222221 0 000     01   223333344


Q ss_pred             HHHHHHHHHHHHHHHHHH-HhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHHHHHHHH
Q psy665           96 LLSISSAAGQLFVFFTIY-KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGI----LGILMVLMAVLLQAYC  164 (180)
Q Consensus        96 ~~~~~~~~g~~~~~~~i~-~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~----iG~~lv~~Gv~~~~~~  164 (180)
                      ..+++..+++.+++.+.+ +.++.+.++.++.+|+++++.|+++|+|+.+++++    +|++++++|+.+....
T Consensus       216 ~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       216 LPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            477778888889889999 99999999999999999999999999999999999    9999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.92  E-value=3.6e-08  Score=78.47  Aligned_cols=142  Identities=17%  Similarity=0.071  Sum_probs=113.8

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHH
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCI   95 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~   95 (180)
                      ..+-++.|..+.+.+-.||+.|-+..+|.-+  ..+...-+.+-..++.+..+|.-..+...      ...+|......+
T Consensus       142 ~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~------~l~~p~ll~laL  213 (292)
T COG5006         142 VWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGP------ALFSPSLLPLAL  213 (292)
T ss_pred             cCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcch------hhcChHHHHHHH
Confidence            3457899999999999999999999999864  33556677777778888888876644321      124566666666


Q ss_pred             HHHHHH-HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665           96 LLSISS-AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus        96 ~~~~~~-~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      ..++++ .+=+.+=..++++.++-+.++...++|.+..+.+++++||.+|+.||.|++.|+.+..=.++.-
T Consensus       214 gvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         214 GVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             HHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            677765 5556666789999999999999999999999999999999999999999999999886555543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.89  E-value=1.3e-07  Score=67.02  Aligned_cols=103  Identities=27%  Similarity=0.402  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHH-HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh
Q psy665           61 LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA-AGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIY  139 (180)
Q Consensus        61 ~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~-~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~f  139 (180)
                      .++.+...+.....++..+..+...+++  |......++++. .+..+++.++++.++ .+++...+.|+++.++|.++|
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            4455666665566666544443333333  334555566654 778888899999996 777888899999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665          140 AHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus       140 g~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      +|++++.+|+|+++++.|+.+..+.+.
T Consensus        83 ~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   83 KERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999999999999999999887653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.86  E-value=1.9e-07  Score=78.93  Aligned_cols=137  Identities=13%  Similarity=0.086  Sum_probs=106.6

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHH
Q psy665           24 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA  103 (180)
Q Consensus        24 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~  103 (180)
                      +..++..-++.+...++.+..++ .+.++....+|-..++.+.+++......+..   .....+...|..+...++++.+
T Consensus        15 ~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g~~   90 (358)
T PLN00411         15 LTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLGSM   90 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHHHH
Confidence            45566666777888888888775 4889999999999999888887765432100   0011122345566667777766


Q ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH------hCCCCchhhHHHHHHHHHHHHHHHHH
Q psy665          104 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCII------YAHPISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus       104 g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~------fg~~lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      .+.+.+.++++.+|..++++.++.|+++.++++++      ++|++++.+++|.++.+.|+.+....
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            66688899999999999999999999999999999      79999999999999999999887653

>KOG1443|consensus

Probab=98.85  E-value=9.2e-08  Score=78.01  Aligned_cols=146  Identities=18%  Similarity=0.212  Sum_probs=115.0

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCC---CChhhHHHHhHHHHHHHHHHHH-HHhCch-h-hHhhHhhcCh-
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYK---VTSLQMMFGTNLFSCLFTAVSL-LQQGGF-Y-QSLHFMLQFP-   88 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~---~~~~~~~~y~~~~~~i~~~~~~-~~~g~~-~-~~~~~~~~~p-   88 (180)
                      +.++++.|..++.+|.++.|+.-.+.+.++++.+   .+|..++++...+..+.++|.. .+||-. . ..-.|...++ 
T Consensus       158 sTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~  237 (349)
T KOG1443|consen  158 STQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTG  237 (349)
T ss_pred             ccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCcc
Confidence            3469999999999999999999999999888753   5889999999999888888754 566521 1 1111222222 


Q ss_pred             hhHHHHHHHHHH---HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           89 SFTLDCILLSIS---SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        89 ~~~~~l~~~~~~---~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      ..+..+...+.+   +++--++-+..+.+++.++.++++-.+-+.+++++..+.++.++...|.|..+...|+.++
T Consensus       238 ~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  238 LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            344444444433   4455566778899999999999999999999999999999999999999999999999998

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.85  E-value=1.6e-07  Score=68.43  Aligned_cols=118  Identities=14%  Similarity=0.111  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH-HH
Q psy665           22 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS-IS  100 (180)
Q Consensus        22 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~-~~  100 (180)
                      .|+++++.+.++.+...++-|+=.++.+.  .+.... .       ... +          ....+|..   .+..+ ++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~-------~~~-~----------~~~~~p~~---~i~lgl~~   57 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-F-------IAA-L----------LAFGLALR---AVLLGLAG   57 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-H-------HHH-H----------HHHhccHH---HHHHHHHH
Confidence            48899999999999988888876655432  221110 0       000 0          01122211   22233 45


Q ss_pred             HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH--HhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          101 SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCI--IYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       101 ~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~--~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ..++..++..++++.+...+.++.+.-.+...+.++.  +|||++|+.+++|++++++|+.+...
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            6777888889999999999999999998888888885  89999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.74  E-value=4e-07  Score=72.83  Aligned_cols=118  Identities=16%  Similarity=0.117  Sum_probs=91.9

Q ss_pred             hhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH-HHHHHHHHHHHHHH
Q psy665           34 DSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS-ISSAAGQLFVFFTI  112 (180)
Q Consensus        34 ~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~-~~~~~g~~~~~~~i  112 (180)
                      ||...+..|..+++ ..|+.+..++-.+++.+...+.....           .+.+.+......+ ++..+.+.+.+.++
T Consensus         1 Wg~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~   68 (260)
T TIGR00950         1 WGTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAV   68 (260)
T ss_pred             CcchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45556565665543 56889999999888888777654321           1223344444555 44577788899999


Q ss_pred             HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          113 YKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       113 ~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ++.++...+++..+.|+++.+++.++++|++++.+++|+.+.+.|+.+...
T Consensus        69 ~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        69 KRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             HhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999999999999999999999999888653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.74  E-value=2.1e-06  Score=69.78  Aligned_cols=133  Identities=18%  Similarity=0.166  Sum_probs=104.2

Q ss_pred             hhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhh-cChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy665           34 DSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFML-QFPSFTLDCILLSISSAAGQLFVFFTI  112 (180)
Q Consensus        34 ~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~-~~p~~~~~l~~~~~~~~~g~~~~~~~i  112 (180)
                      .++|+...|++    +.++.+-.+-=.++-.+..+..+++..+-.+   +.. .++..|..++..|..+++--.+...+-
T Consensus       160 f~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa  232 (293)
T COG2962         160 FGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAA  232 (293)
T ss_pred             HHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHH
Confidence            47777554444    5677766665555555655555554432111   223 556678888888999999999999999


Q ss_pred             HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy665          113 YKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKK  173 (180)
Q Consensus       113 ~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~~~  173 (180)
                      ++.+=.+....++.+|..-.++++++|||++++-+++.-+.+-.|+.++.+..-+++||++
T Consensus       233 ~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~~  293 (293)
T COG2962         233 KRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKKR  293 (293)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999999999999999999998877666553

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.74  E-value=7.6e-07  Score=72.29  Aligned_cols=145  Identities=13%  Similarity=0.153  Sum_probs=116.1

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHH
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILL   97 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~   97 (180)
                      +.+--|+++.+.+-++||+...+.+-+.   +.++.|+..+--+++.+++.......++..+..+ ..++|+.+......
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~   78 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALT   78 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHH
Confidence            3456799999999999999997766653   5699999999999999999987776665544433 45667766555444


Q ss_pred             HHHHHHHHHHHH-HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHh
Q psy665           98 SISSAAGQLFVF-FTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLR  167 (180)
Q Consensus        98 ~~~~~~g~~~~~-~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~  167 (180)
                      +.. ...|...| +++.+--.+-++.-=.+.|.+.+++|.++|+|++++.||+..++...||....|....
T Consensus        79 a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~  148 (293)
T COG2962          79 ALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS  148 (293)
T ss_pred             HHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC
Confidence            433 23454444 8999999999999999999999999999999999999999999999999999886533

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.72  E-value=1.3e-06  Score=71.65  Aligned_cols=130  Identities=17%  Similarity=0.064  Sum_probs=100.9

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHH-H
Q psy665           24 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS-A  102 (180)
Q Consensus        24 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~-~  102 (180)
                      +++++.-.++||...+..|....  +.+|.+.+++-..++.+..++.....++-       ....+.|......+++. .
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-------LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHH
Confidence            45677788999999988876654  57999999999999988887766544320       11223455555566554 4


Q ss_pred             HHHHHHHHHH-HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          103 AGQLFVFFTI-YKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       103 ~g~~~~~~~i-~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ..+.+.+.+. ++.++..+++...+.|+++.+++.+ ++|++++.+|+|..+.+.|+.+..+
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            5566777777 8889899999999999999999985 7999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.71  E-value=1.4e-06  Score=73.51  Aligned_cols=139  Identities=9%  Similarity=0.082  Sum_probs=105.4

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCC-hhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVT-SLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILL   97 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~-~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~   97 (180)
                      .++.-.++++.--.+...+.++.|.++++.  + |+.+..+--+++.+...+... .+ ..+..++ ...+..|..++..
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~-~~~~~~~~~llp~  120 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRI-KSLKLFLKNFLPQ  120 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCC-CCHHHHHHHHHHH
Confidence            355555566666666677788888888865  6 888888888888776544332 11 1000000 1112356678888


Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      ++|+..++.....+++..++....++..+.|+++++++.++++|++++.+++|.+++++|+.+..
T Consensus       121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            99988888888899999999999999999999999999999999999999999999999998765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.62  E-value=9.6e-07  Score=72.85  Aligned_cols=127  Identities=13%  Similarity=0.049  Sum_probs=99.1

Q ss_pred             hHHHHHHHHhhCCCC--hhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy665           37 TSNWQGVLFESYKVT--SLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYK  114 (180)
Q Consensus        37 ~~~~~~~l~~~~~~~--~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~  114 (180)
                      +...||++.++....  +.-+++......++...+.....+.       .......+......+++..++..+...++++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-------PKSRKIPLKKYAILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-------cCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            557899988865333  6777777766666666655543330       1112223556667788889999999999999


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy665          115 FGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAS  170 (180)
Q Consensus       115 ~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~  170 (180)
                      .+-.+..++...+++.++++|+++++++.++.++.+.+++.+|+.+....+.++++
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            99999999999999999999999999999999999999999999998887654443

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.61  E-value=6.3e-07  Score=73.66  Aligned_cols=132  Identities=14%  Similarity=0.063  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHH
Q psy665           23 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA  102 (180)
Q Consensus        23 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~  102 (180)
                      |+++.+.++++||..++..|++.   +.++.+.+.  ..++............+.    .  .+.+..+..-+..++.=.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~--~~~~~~~~~g~l~G~~w~   70 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----E--FWALSIFLVGLLSGAFWA   70 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----c--ccccHHHHHHHHHHHHHH
Confidence            67899999999999999998864   445555542  233333333222211110    0  122444555555566678


Q ss_pred             HHHHHHHHHHHHhchHHHHHHHH-HHHHHHHHHHHHHhCCCCchhh----HHHHHHHHHHHHHHHHHH
Q psy665          103 AGQLFVFFTIYKFGAIVFTIIMT-VRQGLAILLSCIIYAHPISLLG----ILGILMVLMAVLLQAYCK  165 (180)
Q Consensus       103 ~g~~~~~~~i~~~gal~~ai~~~-lr~v~sillsv~~fg~~lt~~~----~iG~~lv~~Gv~~~~~~k  165 (180)
                      .+|++++.++++.|..+.-++.+ +.++++.+.|+++|+|+.++++    ++|.++++.|+.+....+
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            89999999999999999988888 8889999999999999999999    999999999988875543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.60  E-value=3.8e-06  Score=69.04  Aligned_cols=124  Identities=11%  Similarity=0.091  Sum_probs=92.6

Q ss_pred             HhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHHH
Q psy665           32 SCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFT  111 (180)
Q Consensus        32 ~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~  111 (180)
                      ++......++|.+++++ ..|..+.+.-..++.+...+. ...+..    .....+.+.|..++..+++..+.+.+...+
T Consensus        12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   85 (302)
T TIGR00817        12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGLP----KRLKISSALLKLLLPVAIVHTIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344556788888754 367777776666665554433 111110    001123456777888888888888889999


Q ss_pred             HHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665          112 IYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus       112 i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      +++.++...+++..+.|+++.+++.++++|++++.+++|.+++++|+.+.
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999764

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.58  E-value=2.9e-06  Score=69.70  Aligned_cols=130  Identities=14%  Similarity=0.040  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHH
Q psy665           22 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS  101 (180)
Q Consensus        22 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~  101 (180)
                      .++++++.++++|+......|.....  .+|....++-..++.+...+..   .. .   . ..+  +.+...+..++..
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~--~~P~~~~~~R~~~a~l~l~~~~---~~-~---~-~~~--~~~~~~~~~~l~~   71 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSES--LGPVGGAAMIYSVSGLLLLLTV---GF-P---R-LRQ--FPKRYLLAGGLLF   71 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHHHHc---cc-c---c-ccc--ccHHHHHHHhHHH
Confidence            35778999999999999888876654  5999999988888877766532   11 0   0 111  1122222222333


Q ss_pred             HHHHHHHHHHHH----HhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          102 AAGQLFVFFTIY----KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       102 ~~g~~~~~~~i~----~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ...+.+.+.+++    ..++..++++.++.|+++.++++++++|++++.+|+|+++.+.|+.+...
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            344445555554    35677788999999999999999999999999999999999999877653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.56  E-value=5.3e-06  Score=68.25  Aligned_cols=124  Identities=13%  Similarity=0.125  Sum_probs=92.5

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHH
Q psy665           25 ILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAG  104 (180)
Q Consensus        25 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g  104 (180)
                      ++.+++.++|+......|...+  +.+|....++-..++.+..++....           .+  ..+..++..+++...+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~-----------~~--~~~~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVAR-----------PK--VPLNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcC-----------CC--CchHHHHHHHHHHHHH
Confidence            5678889999999999987665  4699999999888776554432210           11  1123344445554444


Q ss_pred             HH-HHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665          105 QL-FVFFTIYK-FGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus       105 ~~-~~~~~i~~-~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      +. +.+.++++ .++...+++.++.|+++.++++++++|+++.++++|.++.+.|+.+...
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            44 45567776 4678888889999999999999999999999999999999999887653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.42  E-value=4.2e-06  Score=59.33  Aligned_cols=63  Identities=6%  Similarity=0.142  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      ++..++.+++..++++.+...+.+...+.++.+.++|+++|||++++.+++|+++++.|+...
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            345567778889999999999999999999999999999999999999999999999998764

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.35  E-value=6.4e-05  Score=60.26  Aligned_cols=141  Identities=23%  Similarity=0.203  Sum_probs=100.3

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      ....+....+...+.|+......+..... ..+.....++...++.+...+.......     .....+...+...+.-.
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   77 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR-----GLRPALRPWLLLLLLAL   77 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc-----cccccccchHHHHHHHH
Confidence            45677788888888899888887776543 3466666665666566552222211110     00111111233444445


Q ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH-HHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSC-IIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv-~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      ++....+.+.+.++++.++...++.....|+++.+++. ++++|++++.+|+|..+.+.|+.+..+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~  145 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG  145 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC
Confidence            66778888889999999999999999999999999996 67799999999999999999999887644

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.25  E-value=2.2e-05  Score=65.87  Aligned_cols=78  Identities=17%  Similarity=0.248  Sum_probs=70.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           89 SFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        89 ~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      ..|+.-+.++++-..++++...+.+.++.+...+......++++++|+++++++.++.|++|+++.++|+.+..+...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            345555557899999999999999999999999999999999999999999999999999999999999988777653

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG3912|consensus

Probab=98.24  E-value=3.4e-05  Score=62.68  Aligned_cols=148  Identities=16%  Similarity=0.188  Sum_probs=107.1

Q ss_pred             CCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHH-H----hCch------------
Q psy665           15 VGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLL-Q----QGGF------------   77 (180)
Q Consensus        15 ~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~-~----~g~~------------   77 (180)
                      .+-+.-+.|+++++.+-+.-|+..+.+||.+++++.+|.+..-|-.++|.+......+ +    .|+-            
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~  248 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW  248 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence            3446779999999999999999999999999999999999999999999765443322 1    1211            


Q ss_pred             hhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHH
Q psy665           78 YQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMA  157 (180)
Q Consensus        78 ~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~G  157 (180)
                      .+++.-....|.....+...-+.-+.-|+.=....|+.++++=.+.-.+|..+-=+++.....|.+...|+.|-++.+.|
T Consensus       249 ~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~G  328 (372)
T KOG3912|consen  249 GDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMG  328 (372)
T ss_pred             HHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111111222211111111111122233444567888999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy665          158 VLLQA  162 (180)
Q Consensus       158 v~~~~  162 (180)
                      ..+|.
T Consensus       329 i~lY~  333 (372)
T KOG3912|consen  329 IILYN  333 (372)
T ss_pred             HHHHH
Confidence            99886

>TIGR00688 rarD rarD protein

Probab=98.19  E-value=5.2e-05  Score=60.82  Aligned_cols=105  Identities=10%  Similarity=-0.005  Sum_probs=69.8

Q ss_pred             HHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcCh-hhHHHHHHHHHHHHHH
Q psy665           26 LLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFP-SFTLDCILLSISSAAG  104 (180)
Q Consensus        26 l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p-~~~~~l~~~~~~~~~g  104 (180)
                      +.+++.+++|.+.+..||..+ .  +..+... .++...+...+.....+..    .....++ ..|..++..++++.++
T Consensus       150 ~~l~aa~~~a~~~i~~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~t~i~  221 (256)
T TIGR00688       150 EALVLAFSFTAYGLIRKALKN-T--DLAGFCL-ETLSLMPVAIYYLLQTDFA----TVQQTNPFPIWLLLVLAGLITGTP  221 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCC-C--CcchHHH-HHHHHHHHHHHHHHHhccC----cccccCchhHHHHHHHHHHHHHHH
Confidence            567789999999999888643 2  2222222 1222222222222221111    0001122 3577777788889999


Q ss_pred             HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q psy665          105 QLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCII  138 (180)
Q Consensus       105 ~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~  138 (180)
                      +.++.+++++.++..++++.+++|++++++++++
T Consensus       222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.16  E-value=0.0004  Score=56.98  Aligned_cols=105  Identities=10%  Similarity=0.028  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHH
Q psy665           21 LSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS  100 (180)
Q Consensus        21 ~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~  100 (180)
                      ..|+.+++.++++++...++.|....+  .++.+..++-.+++.+.+.+......        ...+++.|......+++
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~--~~~~~~~~~R~~~a~l~l~~~~~~~~--------~~~~~~~~~~~~~~g~~   80 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPL--VGAPGVTALRLALGTLILIAIFKPWR--------LRFAKEQRLPLLFYGVS   80 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHhHHh--------ccCCHHHHHHHHHHHHH
Confidence            789999999999999999988877764  59999999999999887765432111        11223455566667777


Q ss_pred             HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Q psy665          101 SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLS  135 (180)
Q Consensus       101 ~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sills  135 (180)
                      ....+.+.++++++.++...++.....|+++.+++
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~  115 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS  115 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence            77778888899999999999999999999999887

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.11  E-value=0.00023  Score=59.87  Aligned_cols=138  Identities=15%  Similarity=0.033  Sum_probs=99.8

Q ss_pred             ccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHH--HH---HHHhCchhhHhhHhhcChhhHHH
Q psy665           19 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTA--VS---LLQQGGFYQSLHFMLQFPSFTLD   93 (180)
Q Consensus        19 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~--~~---~~~~g~~~~~~~~~~~~p~~~~~   93 (180)
                      ....|+++++++.+|++-+++-+|| .+   .-+||.. |. ..+....+  |.   .+..+++.+..  .+.++..+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k---~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~--~~~~~~~~~~   75 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VK---KWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYY--SSFSGSTLLP   75 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cC---CCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHH--HhcCHHHHHH
Confidence            5688999999999999999999988 33   3456766 54 33332211  21   12223322211  2355677777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH-HHHHHHHHHHHHHhCCC-------CchhhHHHHHHHHHHHHHHHHH
Q psy665           94 CILLSISSAAGQLFVFFTIYKFGAIVFTIIMT-VRQGLAILLSCIIYAHP-------ISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus        94 l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~-lr~v~sillsv~~fg~~-------lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      .++.+++=.+||...+.++++.|-...-++++ ++-+...+++.++|||=       -.....+|.++++.|+.+..+.
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            77788888999999999999999888777765 68899999999999842       2245778999999999998884

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.06  E-value=4.1e-05  Score=54.98  Aligned_cols=67  Identities=16%  Similarity=0.277  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVF-TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~-ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      .++..++.++...++++.+-.++ ++.+-+.-+.+.++|+++|||++|+.+++|++++++|+......
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34555666777788888876655 44456889999999999999999999999999999999776443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.00  E-value=2.6e-05  Score=62.67  Aligned_cols=82  Identities=15%  Similarity=0.216  Sum_probs=70.8

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           87 FPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        87 ~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      ++.....+..=+++..+.+.+.+.++++.+|.+..+....|.++|.+++++++++++++.||++..+.+.|+.+......
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            33444444555678888999999999999999999999999999999999999999999999999999999998876654


Q ss_pred             hh
Q psy665          167 RK  168 (180)
Q Consensus       167 ~~  168 (180)
                      ..
T Consensus        93 ~~   94 (244)
T PF04142_consen   93 QS   94 (244)
T ss_pred             cc
Confidence            43

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.97  E-value=0.00083  Score=49.39  Aligned_cols=130  Identities=18%  Similarity=0.238  Sum_probs=92.7

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHH
Q psy665           24 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA  103 (180)
Q Consensus        24 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~  103 (180)
                      .++.+.+-.+-++...++.|+-++.+ +++.-.+.+...+++.+....+..++. +. ....+.|  |+..+ =++++..
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~-~~~~~~p--~w~~l-GG~lG~~   76 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL-ASLSSVP--WWAYL-GGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc-chhccCC--hHHhc-cHHHHHH
Confidence            34555555555666666666655433 689999999999999988877766543 11 1122222  22222 4678888


Q ss_pred             HHHHHHHHHHHhchHHHHHHHHH-HHHHHHHHHHH-HhC---CCCchhhHHHHHHHHHHHH
Q psy665          104 GQLFVFFTIYKFGAIVFTIIMTV-RQGLAILLSCI-IYA---HPISLLGILGILMVLMAVL  159 (180)
Q Consensus       104 g~~~~~~~i~~~gal~~ai~~~l-r~v~sillsv~-~fg---~~lt~~~~iG~~lv~~Gv~  159 (180)
                      ...+....+++.|+..+...... +-+.++++.-+ +|+   +++++...+|.++++.|+.
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            88888899999999998888877 66677778876 444   8899999999999999985

>KOG2766|consensus

Probab=97.95  E-value=5e-06  Score=66.65  Aligned_cols=149  Identities=12%  Similarity=0.161  Sum_probs=113.4

Q ss_pred             cCCCCCCCCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhc
Q psy665            7 SSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQ   86 (180)
Q Consensus         7 ~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~   86 (180)
                      +|....+..+.++...|++++++..-+.|+-++.+|-+-|  +.+..|+|-...++|+++..+=.+.+..-....   +.
T Consensus       151 sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl---~w  225 (336)
T KOG2766|consen  151 SDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFERHHVSTL---HW  225 (336)
T ss_pred             eeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhccceeeE---ee
Confidence            5654444555678899999999999999999999999887  458999999999999999887655443211111   11


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           87 FPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        87 ~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      +.+...++ .+++|-++-..+.-..+|..|++..++-......-++++  ..||-+++|...+.-+.+..|..+|+-
T Consensus       226 ~~~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  226 DSAIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             hHHHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            11222222 255666666666667889999999888888899999988  788888999999999999999999853

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.86  E-value=0.0011  Score=46.77  Aligned_cols=64  Identities=9%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIV-FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~-~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      .++..++.++...++|+.+..+ .++.+-+..+.+.+.|+++|||++|+.+++|+++++.|+..-
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3445566677778888887654 567777899999999999999999999999999999998763

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.81  E-value=0.00027  Score=58.57  Aligned_cols=119  Identities=16%  Similarity=0.159  Sum_probs=88.1

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHH
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILL   97 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~   97 (180)
                      ..+.+|+++.+.+.++.+...++|||-..+.+..+.+--.                  +   ... ..++|..|..++. 
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~------------------~---~~~-~l~~~~W~~G~~~-   59 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS------------------G---GRS-YLRRPLWWIGLLL-   59 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc------------------h---hhH-HHhhHHHHHHHHH-
Confidence            4678999999999999999999999965543211111000                  0   001 1233444444432 


Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                         ..+|+...+.++...++...++.+.+.-+.+.+++-++++|+++...+.|+++++.|.....
T Consensus        60 ---~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   60 ---MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             ---HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence               23455666778899999999999999999999999999999999999999999999987654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.77  E-value=0.00022  Score=57.96  Aligned_cols=116  Identities=16%  Similarity=0.165  Sum_probs=83.2

Q ss_pred             CCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH-H
Q psy665           49 KVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTV-R  127 (180)
Q Consensus        49 ~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~l-r  127 (180)
                      +-+|.+.++=+.+=+.++.+...++...     . ...++..+...+..+++=.+||...+.++++.|-..+.++++- +
T Consensus         9 gG~~~~Q~lG~t~Gali~alv~~~~~~p-----~-~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q   82 (269)
T PF06800_consen    9 GGKPANQILGTTIGALIFALVVFLFRQP-----A-FSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ   82 (269)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHhCC-----C-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence            3456666665555444444444332221     1 1223455666677778889999999999999999999999875 6


Q ss_pred             HHHHHHHHHHHhCCCCchhhHH----HHHHHHHHHHHHHHHHHhhhh
Q psy665          128 QGLAILLSCIIYAHPISLLGIL----GILMVLMAVLLQAYCKLRKAS  170 (180)
Q Consensus       128 ~v~sillsv~~fg~~lt~~~~i----G~~lv~~Gv~~~~~~k~~~k~  170 (180)
                      -+.+.+.++++|||--+..+++    +.++++.|+.+.++.++++++
T Consensus        83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            6779999999999987776665    888899999998887655543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.74  E-value=0.0018  Score=52.69  Aligned_cols=131  Identities=14%  Similarity=0.144  Sum_probs=91.8

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHH-HHHhCchhhHhhHhhcChhhHHHH
Q psy665           16 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVS-LLQQGGFYQSLHFMLQFPSFTLDC   94 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~-~~~~g~~~~~~~~~~~~p~~~~~l   94 (180)
                      ++++...|+..++++.+....|.++.+-    .+.+++...+=. .++....... .....+       ...+...|.. 
T Consensus       132 ~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPq-aiGm~i~a~i~~~~~~~-------~~~~k~~~~n-  198 (269)
T PF06800_consen  132 SKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQ-AIGMLIGAFIFNLFSKK-------PFFEKKSWKN-  198 (269)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHH-HHHHHHHHHHHhhcccc-------cccccchHHh-
Confidence            3456678999999998888888877444    256777766633 2333332222 221211       1122234444 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhh----HHHHHHHHHHHH
Q psy665           95 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLG----ILGILMVLMAVL  159 (180)
Q Consensus        95 ~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~----~iG~~lv~~Gv~  159 (180)
                      +.-+++=.+|+.+++...++.|..+.=+++-+..+++.+.|+++|+|+=+.++    ++|.++++.|..
T Consensus       199 il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  199 ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            34567778999999999999999999999999999999999999999988764    467777777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.72  E-value=0.00037  Score=49.32  Aligned_cols=65  Identities=22%  Similarity=0.229  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVF-TIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~-ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ++..++.++...++++.+-.++ ++.+-+..+.+.+.|+++|+|++|+.+++|+++++.|+.....
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3444555666788888876554 4446688899999999999999999999999999999988644

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.57  E-value=0.0014  Score=45.95  Aligned_cols=64  Identities=5%  Similarity=0.107  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal-~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      .++..++.++...++|+.+-. ..++.+-+..+.+.+.|+++|||++|+.+++|+++++.|+..-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            344556666777888887754 4577777899999999999999999999999999999998764

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.54  E-value=0.006  Score=45.40  Aligned_cols=136  Identities=19%  Similarity=0.188  Sum_probs=88.2

Q ss_pred             cHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHh-CchhhHhhHhhcChhhHHHHHHHH
Q psy665           20 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        20 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      ..+.+++.+++-.+-.+...++.|+.+.-+ +|.--.+.....|++.+....+.. +..  .......+|.  +... =+
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~--~~a~~~~~pw--W~~~-GG   76 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHP--GLAAVASAPW--WAWI-GG   76 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCC--chhhccCCch--HHHH-cc
Confidence            345666777776666777777777665433 678888888888888877665542 322  1222233333  3221 12


Q ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHH-HHHHHHHHHHHHhC----CCCchhhHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVFTIIMTV-RQGLAILLSCIIYA----HPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~ai~~~l-r~v~sillsv~~fg----~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      +++.+-.........+.|+.++...... +-+.++++.-+=+.    +++++.-++|++++++|+.+.
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            3444444444566788888877776666 66677778777443    789999999999999996554

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.42  E-value=0.00092  Score=45.76  Aligned_cols=55  Identities=16%  Similarity=0.197  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHH
Q psy665          100 SSAAGQLFVFFTIYKFGAIVF-TIIMTVRQGLAILLSCIIYAHPISLLGILGILMV  154 (180)
Q Consensus       100 ~~~~g~~~~~~~i~~~gal~~-ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv  154 (180)
                      +..++.++...++|+.+..++ ++..-+..+.+.+.|+++|||++|+.+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            455566777799999887777 5566689999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.0027  Score=44.51  Aligned_cols=65  Identities=12%  Similarity=0.252  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal-~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      ++-.+...+...++|+.+-. ..++.+-.-.+.+.+.|+++|+|++++.+++|.+++++|+..-.+
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            34445566677888888754 457888889999999999999999999999999999999976533

>KOG2234|consensus

Probab=97.24  E-value=0.019  Score=48.16  Aligned_cols=146  Identities=11%  Similarity=0.107  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhhC--CCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhH-hhcChhhH---HHHH
Q psy665           22 SGVILLALYLSCDSFTSNWQGVLFESY--KVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHF-MLQFPSFT---LDCI   95 (180)
Q Consensus        22 ~G~~l~l~s~~~~a~~~~~~~~l~~~~--~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~-~~~~p~~~---~~l~   95 (180)
                      .=.+.++...+..+.....-+...++.  +-.+....+-+=.+-.+++...++.+.+-. ...+ ...+++.|   .+.+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKY-AKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHH-hhhhhhhcCHHHHhChHHHH
Confidence            444444444455555544443333322  345566666666666777666665552110 0011 11222221   1333


Q ss_pred             HH---HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q psy665           96 LL---SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK  168 (180)
Q Consensus        96 ~~---~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~  168 (180)
                      ..   +++.++=|...+.+..+.+|.+..+...++...|.+++++++++++++.||....+.+.|+.+..+....+
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            33   34555666788899999999999999999999999999999999999999999999999999988544333

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.94  E-value=0.0062  Score=43.24  Aligned_cols=106  Identities=15%  Similarity=0.175  Sum_probs=72.9

Q ss_pred             HHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHHHHHHHH
Q psy665           31 LSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFF  110 (180)
Q Consensus        31 ~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~~~~  110 (180)
                      .++||.++.+-||--+..+......    +.+.-                ..+...+|+.+...+    ..-.|...++.
T Consensus         5 g~~WG~Tnpfik~g~~~~~~~~~~~----~~~~~----------------~~~Ll~n~~y~ipf~----lNq~GSv~f~~   60 (113)
T PF10639_consen    5 GILWGCTNPFIKRGSSGLEKVKASL----QLLQE----------------IKFLLLNPKYIIPFL----LNQSGSVLFFL   60 (113)
T ss_pred             hHHhcCchHHHHHHHhhcCCccchH----HHHHH----------------HHHHHHhHHHHHHHH----HHHHHHHHHHH
Confidence            4688999999988665442221110    11000                011233344333222    34566777888


Q ss_pred             HHHHhchHHHHHHH-HHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q psy665          111 TIYKFGAIVFTIIM-TVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL  160 (180)
Q Consensus       111 ~i~~~gal~~ai~~-~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~  160 (180)
                      .+++.+-..+.++. .+.-++|.+.++++.+|..++..++|+++++.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            99999999888885 789999999999998999999999999999999753

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.58  E-value=0.00042  Score=55.43  Aligned_cols=136  Identities=13%  Similarity=0.057  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHH
Q psy665           23 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA  102 (180)
Q Consensus        23 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~  102 (180)
                      ++++.+.-.+.|+....+..|.    +-.|.+.+.-+++=+.++.++..++..        ...++..+..-+..+..=.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~GALifaiiv~~~~~--------p~~T~~~~iv~~isG~~Ws   70 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLGALIFAIIVFLFVS--------PELTLTIFIVGFISGAFWS   70 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHHHHHHHHHHheeec--------CccchhhHHHHHHhhhHhh
Confidence            5677788888999888776664    457777777666555555444333111        0111222333333345557


Q ss_pred             HHHHHHHHHHHHhchHHHHHHHHH-HHHHHHHHHHHHhCCCCchhhHH----HHHHHHHHHHHHHHHHHhhhh
Q psy665          103 AGQLFVFFTIYKFGAIVFTIIMTV-RQGLAILLSCIIYAHPISLLGIL----GILMVLMAVLLQAYCKLRKAS  170 (180)
Q Consensus       103 ~g~~~~~~~i~~~gal~~ai~~~l-r~v~sillsv~~fg~~lt~~~~i----G~~lv~~Gv~~~~~~k~~~k~  170 (180)
                      +||...+++++..|...+.++++= +-+-+.+.+++.|+|=-++.|.+    ..++++.|+++.+++++.+|+
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            899999999999999999999875 77788999999999988887753    567778888888776654443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.45  E-value=0.26  Score=41.46  Aligned_cols=140  Identities=15%  Similarity=0.122  Sum_probs=88.6

Q ss_pred             CccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHH---hCchhhHhhHhhcCh-hhHHH
Q psy665           18 TTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQ---QGGFYQSLHFMLQFP-SFTLD   93 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~---~g~~~~~~~~~~~~p-~~~~~   93 (180)
                      +.-+.|+++.....++.+.+++=.+|.    +.=+||.+--..-+-.-+.+|....   -.++.   +.....| +.+..
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv----k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~---~i~~~~~~~~l~~   75 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV----KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFF---SIYSATPASTLFW   75 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc----CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHH---HHHHhCChhHHHH
Confidence            355899999999999999999777775    3344666554443333344444322   23332   2233333 45566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHH-------hCCCCchhhHHHHHHHHHHHHHHHHH
Q psy665           94 CILLSISSAAGQLFVFFTIYKFGA-IVFTIIMTVRQGLAILLSCII-------YAHPISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus        94 l~~~~~~~~~g~~~~~~~i~~~ga-l~~ai~~~lr~v~sillsv~~-------fg~~lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      ..++++.=-+|...+-.++|+.|- +..++..-+.-++..++--++       ++++-....++|.++.+.|+.+..+.
T Consensus        76 ~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   76 TFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            677788777788888888998884 344444444444544443333       23344557899999999999888765

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581|consensus

Probab=96.07  E-value=0.064  Score=44.33  Aligned_cols=127  Identities=13%  Similarity=0.083  Sum_probs=96.2

Q ss_pred             hhhHHHHHHHHhh-CC------CChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHHHHHHH
Q psy665           35 SFTSNWQGVLFES-YK------VTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLF  107 (180)
Q Consensus        35 a~~~~~~~~l~~~-~~------~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~~g~~~  107 (180)
                      -.++++|||+..+ |+      .++.-+.+..++.+.+...+.+-...       -...++..|+..-..++.+.++..+
T Consensus        27 l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k-------~~~~~~apl~~y~~is~tn~~s~~~   99 (327)
T KOG1581|consen   27 LTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWK-------KELSGVAPLYKYSLISFTNTLSSWC   99 (327)
T ss_pred             HHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccc-------ccCCCCCchhHHhHHHHHhhcchHH
Confidence            4467889997663 41      34455666666666665533332111       0134455566667778889999999


Q ss_pred             HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q psy665          108 VFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK  168 (180)
Q Consensus       108 ~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~~~  168 (180)
                      -+-++|+.+=.+..+.-..+-+..++++.++.+.+.++.-..=..+|-.|+.+.+..++.+
T Consensus       100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen  100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            9999999999999999999999999999999999999999999999999998887775444

>KOG1441|consensus

Probab=95.85  E-value=0.35  Score=40.46  Aligned_cols=144  Identities=8%  Similarity=0.049  Sum_probs=94.5

Q ss_pred             CccHHHHHHHHHHHHh-hhhhHHHHHHHHhhCC-CChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHH
Q psy665           18 TTTLSGVILLALYLSC-DSFTSNWQGVLFESYK-VTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCI   95 (180)
Q Consensus        18 ~~~~~G~~l~l~s~~~-~a~~~~~~~~l~~~~~-~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~   95 (180)
                      +....++......-.. .....++.+.++++|+ .-|..++.... ++........-..+.. +..  ....+..|..++
T Consensus        12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~-~~~~l~~~v~~~l~~~-~~~--~~~~~~~~~~ll   87 (316)
T KOG1441|consen   12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHL-FCGALALLVIKVLKLV-PPS--KISSKLPLRTLL   87 (316)
T ss_pred             cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHH-HHHHHHHHHHHHhcCC-CCC--ccccccchHHHH
Confidence            3455555554433333 3444455677887542 23344444433 3333333222222210 000  111235677888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCch----------------------hhHHHHHH
Q psy665           96 LLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISL----------------------LGILGILM  153 (180)
Q Consensus        96 ~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~----------------------~~~iG~~l  153 (180)
                      -++++..++..+-...+++.+-...-++..+.|+++.++++++++|+.+.                      .+|.|...
T Consensus        88 pl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~  167 (316)
T KOG1441|consen   88 PLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFIS  167 (316)
T ss_pred             HHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHH
Confidence            89999999999999999999999999999999999999999999999876                      67888888


Q ss_pred             HHHHHHHHHHHH
Q psy665          154 VLMAVLLQAYCK  165 (180)
Q Consensus       154 v~~Gv~~~~~~k  165 (180)
                      .+++......++
T Consensus       168 a~~s~~~~al~~  179 (316)
T KOG1441|consen  168 AMISNLAFALRN  179 (316)
T ss_pred             HHHHHHHHHHHH
Confidence            888887776543

>KOG4510|consensus

Probab=95.65  E-value=0.0058  Score=49.67  Aligned_cols=68  Identities=18%  Similarity=0.353  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           95 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        95 ~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      ++-++.++.|...+|+++++.+-.=+++++...|++++++++++++||.|+...+|..+-+.|+.+..
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv  168 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV  168 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence            34567788888899999999998889999999999999999999999999999999999999987654

>KOG3912|consensus

Probab=95.01  E-value=0.083  Score=43.42  Aligned_cols=66  Identities=18%  Similarity=0.254  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           97 LSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        97 ~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      =++|-..|...++.++..+.|...-+..-.-.+++-++|.-++++.+++.||+|+..+..|+...-
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg  157 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG  157 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence            357888888899999999998888888888889999999999999999999999999999987654

>KOG4314|consensus

Probab=94.66  E-value=0.46  Score=37.25  Aligned_cols=143  Identities=11%  Similarity=0.041  Sum_probs=93.5

Q ss_pred             CCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCC-ChhhHHHHhHHHHHHHH-HHHHH--HhCchhhHhhHhhcChhhHH
Q psy665           17 KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKV-TSLQMMFGTNLFSCLFT-AVSLL--QQGGFYQSLHFMLQFPSFTL   92 (180)
Q Consensus        17 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~-~~~~~~~y~~~~~~i~~-~~~~~--~~g~~~~~~~~~~~~p~~~~   92 (180)
                      -..++.|+.+...|.++.|+|-+..++...+-+. +....|....++..++. +|.++  ++| . +.++....  ..|.
T Consensus       130 ~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~-V-E~~qsFA~--~PWG  205 (290)
T KOG4314|consen  130 HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG-V-EHLQSFAA--APWG  205 (290)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc-h-HHHHHHhh--CCch
Confidence            3567999999999999999999888887664321 22333433444444432 23332  233 1 11111111  2355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           93 DCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        93 ~l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      -+...+..+..-++.+..++....|...++-+.+....-..+..++=+-..+.....|..++..|..+...
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii  276 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII  276 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence            55555555555567777888888999988888777777777777776667888899999999999876654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.63  E-value=0.053  Score=43.92  Aligned_cols=133  Identities=17%  Similarity=0.077  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHHHHHH
Q psy665           23 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA  102 (180)
Q Consensus        23 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~~  102 (180)
                      |++..+.|+++-|-..+=.||.-   .-+..-...+++.-..+......+.           ...|..+...++-+..=+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~-----------~~~p~f~p~amlgG~lW~   66 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLI-----------LGFPPFYPWAMLGGALWA   66 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHh-----------cCCCcceeHHHhhhhhhh
Confidence            55667777776666665555432   2255555555554444433333322           233444444444456667


Q ss_pred             HHHHHHHHHHHHhchHHHHHHHH-HHHHHHHHHHHH-HhCCC-----CchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy665          103 AGQLFVFFTIYKFGAIVFTIIMT-VRQGLAILLSCI-IYAHP-----ISLLGILGILMVLMAVLLQAYCKLRKA  169 (180)
Q Consensus       103 ~g~~~~~~~i~~~gal~~ai~~~-lr~v~sillsv~-~fg~~-----lt~~~~iG~~lv~~Gv~~~~~~k~~~k  169 (180)
                      .|+.+..-.++..|=..--.+=. ..-++.=..|-+ +||.+     -.+..++|.++++.|..++.+-|..++
T Consensus        67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            78888888888887544333322 222222222222 66643     356789999999999999988665543

The region concerned is approximately 280 residues long.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=93.05  E-value=5  Score=34.04  Aligned_cols=147  Identities=12%  Similarity=0.037  Sum_probs=81.6

Q ss_pred             CCCccHHHHHHHHHHHHhhhhhH-------HHHHHHHhhCCCChhhHHHHhHH---HHHHH-HHHHHHH---hCc-hhhH
Q psy665           16 GKTTTLSGVILLALYLSCDSFTS-------NWQGVLFESYKVTSLQMMFGTNL---FSCLF-TAVSLLQ---QGG-FYQS   80 (180)
Q Consensus        16 ~~~~~~~G~~l~l~s~~~~a~~~-------~~~~~l~~~~~~~~~~~~~y~~~---~~~i~-~~~~~~~---~g~-~~~~   80 (180)
                      ++++.-.|+++++.|-+..+.++       ...+.... .+.++.....-...   ++... .++....   .++ ....
T Consensus       168 ~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~  246 (345)
T PRK13499        168 EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLK  246 (345)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc
Confidence            34567899999999999999998       33333211 23344322222211   11111 1111111   111 1000


Q ss_pred             hhHhhcChhhHHHHH---HHHHHHHHHHHHHHHHHHHhchHHHHH---HH-HHHHHHHHHHHHHHhCCCCc------hhh
Q psy665           81 LHFMLQFPSFTLDCI---LLSISSAAGQLFVFFTIYKFGAIVFTI---IM-TVRQGLAILLSCIIYAHPIS------LLG  147 (180)
Q Consensus        81 ~~~~~~~p~~~~~l~---~~~~~~~~g~~~~~~~i~~~gal~~ai---~~-~lr~v~sillsv~~fg~~lt------~~~  147 (180)
                      ..+....+..+...+   +-++.=+++++++..+-++.|.....+   ++ .+.-+++.+-|++ ++|.=+      ...
T Consensus       247 ~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l  325 (345)
T PRK13499        247 ADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVL  325 (345)
T ss_pred             hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHH
Confidence            011111122233322   233455677777888888886655544   44 6667889999995 898766      667


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy665          148 ILGILMVLMAVLLQAYC  164 (180)
Q Consensus       148 ~iG~~lv~~Gv~~~~~~  164 (180)
                      ++|.++++.|..+...+
T Consensus       326 ~~G~vliI~g~~lig~~  342 (345)
T PRK13499        326 SLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999998876654

>KOG1580|consensus

Probab=92.58  E-value=0.18  Score=40.51  Aligned_cols=60  Identities=10%  Similarity=0.042  Sum_probs=52.0

Q ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665          106 LFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus       106 ~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      .....+++..+=-+..+-...+|+-.+++|+++-++.-+|....=..+++.|+.+..+..
T Consensus       100 VssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~  159 (337)
T KOG1580|consen  100 VSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKE  159 (337)
T ss_pred             HhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccc
Confidence            334477787777788888889999999999999999999999999999999999987743

>KOG1444|consensus

Probab=92.25  E-value=5.6  Score=33.20  Aligned_cols=138  Identities=13%  Similarity=0.091  Sum_probs=89.3

Q ss_pred             cHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCCh-hhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHHHHHH
Q psy665           20 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTS-LQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS   98 (180)
Q Consensus        20 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~-~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l~~~~   98 (180)
                      ..-..+..+..|++.-+..+..|..+..|+-|. ..++.+.++.+++.....-. .| +.+...+-.+.++-|..+   +
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~-lv~~~~l~~~~~kk~~P~---~   84 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LG-LVNFRPLDLRTAKKWFPV---S   84 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hc-eeecCCcChHHHHHHccH---H
Confidence            334466677777777888888999998886443 45556777766655443211 11 000000001112223221   1


Q ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q psy665           99 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus        99 ~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      +.-+.-.+.-...+++.+--...++.+..++.+.+.-+++|+..++...|.-....++|...+.
T Consensus        85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            2222233344477888899999999999999999999999999999999999999998876544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=90.76  E-value=0.79  Score=37.99  Aligned_cols=76  Identities=17%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             cChhhHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHH-HHHHHHHHHHHHhCC--CCchhh----HHHHHHHHHH
Q psy665           86 QFPSFTLDCILLSISSAAGQ-LFVFFTIYKFGAIVFTIIMTV-RQGLAILLSCIIYAH--PISLLG----ILGILMVLMA  157 (180)
Q Consensus        86 ~~p~~~~~l~~~~~~~~~g~-~~~~~~i~~~gal~~ai~~~l-r~v~sillsv~~fg~--~lt~~~----~iG~~lv~~G  157 (180)
                      .+|..|..++.+..| .+.| .+..++++++++....++.++ =...+++-|.++|+|  ..++.+    ..|..+++.|
T Consensus       208 ~~~~~y~l~~~~v~~-~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G  286 (300)
T PF05653_consen  208 TYPLTYLLLLVLVVT-AVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG  286 (300)
T ss_pred             hhhHHHHHHHHHHHH-HHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence            455666555444444 5555 455589999999888777665 455677777888884  455544    4567777788


Q ss_pred             HHHHH
Q psy665          158 VLLQA  162 (180)
Q Consensus       158 v~~~~  162 (180)
                      +++-+
T Consensus       287 V~lL~  291 (300)
T PF05653_consen  287 VFLLS  291 (300)
T ss_pred             hheee
Confidence            77653

>KOG4314|consensus

Probab=90.72  E-value=0.1  Score=40.89  Aligned_cols=63  Identities=14%  Similarity=0.313  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHH
Q psy665          102 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus       102 ~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      +..++.+..++++.+|+.++-+....+.+.-+++++++|+.+....++...+.++|+....+.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            356778889999999999999999999999999999999999999988888888887655543

>PRK02237 hypothetical protein; Provisional

Probab=90.26  E-value=4.7  Score=28.32  Aligned_cols=47  Identities=13%  Similarity=0.150  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665          119 VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus       119 ~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      +.+.++-+-.+.|++-.+.+-|.+++..-++|.++++.|+.+..+..
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            34556667788999999999999999999999999999998876654

>KOG2765|consensus

Probab=90.22  E-value=0.27  Score=41.83  Aligned_cols=73  Identities=11%  Similarity=0.122  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHHH
Q psy665           94 CILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL  166 (180)
Q Consensus        94 l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k~  166 (180)
                      .+.++..=+++|+....+++.+.....++.+...-++++.++.++-+|++|+...++.++-++|+.+.+.++.
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            3555666789999999999999999999999999999999999999999999999999999999988766543

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=88.80  E-value=0.24  Score=41.02  Aligned_cols=133  Identities=17%  Similarity=0.178  Sum_probs=74.9

Q ss_pred             HHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHH-HHHhCchh----hHhhHhhcC-hhhHHH---HHHH
Q psy665           27 LALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVS-LLQQGGFY----QSLHFMLQF-PSFTLD---CILL   97 (180)
Q Consensus        27 ~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~-~~~~g~~~----~~~~~~~~~-p~~~~~---l~~~   97 (180)
                      ++++++||+-+.+.|+-.-++-+.+  +..++=..++..+.... .+..|+.-    +...|..+- .+.|..   .+.=
T Consensus         1 M~itmlcwGSW~nt~kL~~r~gR~~--qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aG   78 (336)
T PF07168_consen    1 MVITMLCWGSWPNTQKLAERRGRLP--QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAG   78 (336)
T ss_pred             CeeehhhhcChHHHHHHHHhcCCcc--ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHh
Confidence            3578999999999998876643222  23333334444433322 23333322    222332211 122322   2223


Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH---HhCCCCc--hhhHHHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCI---IYAHPIS--LLGILGILMVLMAVLLQAYC  164 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~---~fg~~lt--~~~~iG~~lv~~Gv~~~~~~  164 (180)
                      ++.--+|+++..+++...|-.++-+++.   =+++++++.   +...+.+  ..-+-|.++++..+.+....
T Consensus        79 GvvfnlgNillq~aia~aGmSVafpvg~---glalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   79 GVVFNLGNILLQAAIAFAGMSVAFPVGI---GLALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             hHhhhhHHHHHHHHHHHhcceeeeeeec---ceEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            4666788999999999999887777662   233344443   2345555  24566888888888776653

Transport is dependent on glucose and a proton gradient [].

>KOG2922|consensus

Probab=88.73  E-value=0.27  Score=41.02  Aligned_cols=123  Identities=13%  Similarity=0.130  Sum_probs=88.2

Q ss_pred             CCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHHH
Q psy665           15 VGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDC   94 (180)
Q Consensus        15 ~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~l   94 (180)
                      ...+.+..|.++.+.|.+.=+...+++||-+++-+...                   ...++-  ..... .+|..|..+
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~-------------------~ra~~g--g~~yl-~~~~Ww~G~   71 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG-------------------LRAGEG--GYGYL-KEPLWWAGM   71 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhc-------------------ccccCC--Ccchh-hhHHHHHHH
Confidence            34567899999999999999999999999766531100                   111110  00111 233334334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           95 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        95 ~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      +.    -.+|...-|.+..-.++..+++.+-+.-+.+.+++..+++|++++...+|+++.+.|-+....
T Consensus        72 lt----m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   72 LT----MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HH----HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            33    345666677777888999999999999999999999999999999999999999999765443

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=87.83  E-value=3.8  Score=28.71  Aligned_cols=46  Identities=11%  Similarity=0.125  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665          120 FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus       120 ~ai~~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      .+..+-+-.+.|++-++.+-+++++..-++|.++++.|+.+..+..
T Consensus        60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            3445567778899999999999999999999999999998876653

; GO: 0016020 membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=84.71  E-value=0.13  Score=41.39  Aligned_cols=136  Identities=13%  Similarity=0.120  Sum_probs=83.5

Q ss_pred             CCCCCccHHHHHHHHHHHHhhhhhHHHHHHHHhhCCCChhhHHHHhHHHHHHHHHHHHHHhCchhhHhhHhhcChhhHHH
Q psy665           14 KVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLD   93 (180)
Q Consensus        14 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~y~~~~~~i~~~~~~~~~g~~~~~~~~~~~~p~~~~~   93 (180)
                      ..++++.-.|+..++.|.+-.-.|.+..+..    +.+.+....-. .++.+......-..++   .   ...+...|..
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPq-AiGMv~~ali~~~~~~---~---~~~~K~t~~n  212 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQ-AIGMVIGALILGFFKM---E---KRFNKYTWLN  212 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHH-HHHHHHHHHHHhhccc---c---cchHHHHHHH
Confidence            4455566788888877765555555443332    33444433322 1233333222211110   0   0111223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHHHHH
Q psy665           94 CILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGI----LGILMVLMAVLLQ  161 (180)
Q Consensus        94 l~~~~~~~~~g~~~~~~~i~~~gal~~ai~~~lr~v~sillsv~~fg~~lt~~~~----iG~~lv~~Gv~~~  161 (180)
                       ..-++.=..|+.+++.+-++.|-.+.=.++-+.-+++++-++++++|+=|.+++    +|+.+++.|..+.
T Consensus       213 -ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         213 -IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             -HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence             234566678999999999999988888888889999999999999999998875    5777777776554

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=84.60  E-value=1.5  Score=30.70  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.0

Q ss_pred             HHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q psy665          132 ILLSCIIYAHPISLLGILGILMVLMAVLL  160 (180)
Q Consensus       132 illsv~~fg~~lt~~~~iG~~lv~~Gv~~  160 (180)
                      +..|+++++|++++.+..|.++++++++.
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f  105 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYF  105 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence            46788999999999999999999998764

>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]

Probab=84.38  E-value=4.4  Score=29.99  Aligned_cols=30  Identities=10%  Similarity=0.149  Sum_probs=19.6

Q ss_pred             HHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q psy665          111 TIYKFGAIVFTIIMTVRQGLAILLSCIIYA  140 (180)
Q Consensus       111 ~i~~~gal~~ai~~~lr~v~sillsv~~fg  140 (180)
                      .+.+.+.+..+...++-|.+.++++.++++
T Consensus        68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La~   97 (150)
T COG3086          68 GIEEKSLLKSALLVYIFPLVGLFLGAILAQ   97 (150)
T ss_pred             ccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            355666667777777777777766665533

>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis

Probab=82.85  E-value=2.8  Score=26.90  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=18.4

Q ss_pred             CCCCchhhHH--HHH----HHHHHHHHHHHHHHhhhhhhhc
Q psy665          140 AHPISLLGIL--GIL----MVLMAVLLQAYCKLRKASLKKK  174 (180)
Q Consensus       140 g~~lt~~~~i--G~~----lv~~Gv~~~~~~k~~~k~~~~~  174 (180)
                      =+.++|-||.  |.+    +.+++.+...+.|.|+.||+++
T Consensus        25 ld~~sp~qW~aIGvi~gi~~~~lt~ltN~YFK~k~drr~~a   65 (68)
T PF04971_consen   25 LDQFSPSQWAAIGVIGGIFFGLLTYLTNLYFKIKEDRRKAA   65 (68)
T ss_pred             HhccCcccchhHHHHHHHHHHHHHHHhHhhhhhhHhhhHhh
Confidence            3667776766  333    3344444555666555554443

The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].

>PF15099 PIRT: Phosphoinositide-interacting protein family

Probab=82.62  E-value=1.6  Score=31.42  Aligned_cols=23  Identities=22%  Similarity=0.423  Sum_probs=13.2

Q ss_pred             CCCCchhhHHHHHHHHHHHHHHH
Q psy665          140 AHPISLLGILGILMVLMAVLLQA  162 (180)
Q Consensus       140 g~~lt~~~~iG~~lv~~Gv~~~~  162 (180)
                      ++..+....+|-++.-.|+++-.
T Consensus        74 n~~~si~~~~G~vlLs~GLmlL~   96 (129)
T PF15099_consen   74 NSHGSIISIFGPVLLSLGLMLLA   96 (129)
T ss_pred             cCCcchhhhehHHHHHHHHHHHH
Confidence            44555556666666666655544

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.56  E-value=4  Score=28.27  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=30.7

Q ss_pred             HHHHHHHH----HHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q psy665          124 MTVRQGLA----ILLSCIIYAHPISLLGILGILMVLMAVLLQ  161 (180)
Q Consensus       124 ~~lr~v~s----illsv~~fg~~lt~~~~iG~~lv~~Gv~~~  161 (180)
                      .+++-+++    ..+|++.++||+.+-++.|.+++.+|++..
T Consensus        72 K~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi  113 (116)
T COG3169          72 KTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI  113 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence            34444444    457999999999999999999999998765

>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae

Probab=80.87  E-value=2.4  Score=28.40  Aligned_cols=34  Identities=21%  Similarity=0.148  Sum_probs=26.9

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy665          142 PISLLGILGILMVLMAVLLQAYCKLRKASLKKKL  175 (180)
Q Consensus       142 ~lt~~~~iG~~lv~~Gv~~~~~~k~~~k~~~~~~  175 (180)
                      .++|...+|+.++++|+.+|..++.+++-.|+.|
T Consensus         4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~Rd~D   37 (84)
T PF07444_consen    4 GFGPSYILGIILILGGLALYFLRFFRPEVSRDYD   37 (84)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHCcchhhhhh
Confidence            4688999999999999999987766665555543

It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	180
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.91
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.63

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.91  E-value=2.2e-09  Score=77.95  Aligned_cols=68  Identities=21%  Similarity=0.201  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHH-HHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVFTII-MTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK  165 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~ai~-~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~~k  165 (180)
                      .++..++.+++.+++++.++..+.++ +.+.|++++++|+++|||++++.+++|+++++.|++.....+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35677788889999999999999888 899999999999999999999999999999999999887643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.63  E-value=1.9e-07  Score=65.10  Aligned_cols=66  Identities=21%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHH-HHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHH
Q psy665           98 SISSAAGQLFVFFTIYKFGAIVFTII-MTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY  163 (180)
Q Consensus        98 ~~~~~~g~~~~~~~i~~~gal~~ai~-~~lr~v~sillsv~~fg~~lt~~~~iG~~lv~~Gv~~~~~  163 (180)
                      .++..++.++..+++|+.+...+.++ ..+.++.+.++|+++|||++|+.+++|+++++.|+.....
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34566777888899999999999888 8999999999999999999999999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00