Psyllid ID: psy6687

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccEEcccccEEcccccccccccccccccccccccEEcccccEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEccccEEEccccccccccccccccccccccccccEEccccEEEcccccccccccccccccccccccEEccccEEEcccccccccccccc
Coil and Loop (DISEMBL)
mcqcpkgyqgtycgtamcfpqclnngtctapgvcscppgfqglhceggpgpgcdqkcsnggwcdsqqmcqcpkgyqgtycgtamcfpqclnngtctapgvcscppgfqglhceggt
Flexible Loop (DISEMBL)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT
Low Complexity Region (SEG)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT
Disordered region (IsUnstruct)
*****KGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLH*****
Disordered Region (DISOPRED)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG**
Disordered Region (DISEMBL)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT
Disordered Region (DISPRO)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q9W3W5	456	Protein shifted OS=Drosop	yes	N/A	0.965	0.245	0.530	1e-25
Q6IN38	379	Wnt inhibitory factor 1 O	yes	N/A	0.965	0.295	0.397	2e-18
Q9WUA1	379	Wnt inhibitory factor 1 O	yes	N/A	0.965	0.295	0.397	2e-18
Q9W6F9	378	Wnt inhibitory factor 1 O	no	N/A	0.965	0.296	0.382	4e-18
Q8N2E2	1590	von Willebrand factor D a	yes	N/A	0.948	0.069	0.415	2e-17
Q9Y5W5	379	Wnt inhibitory factor 1 O	no	N/A	0.965	0.295	0.390	2e-17
Q9W6F8	374	Wnt inhibitory factor 1 O	N/A	N/A	0.939	0.291	0.446	2e-17
Q6V0I7	4981	Protocadherin Fat 4 OS=Ho	no	N/A	0.956	0.022	0.361	1e-14
Q2PZL6	4981	Protocadherin Fat 4 OS=Mu	no	N/A	0.948	0.022	0.364	6e-14
P33450	5147	Cadherin-related tumor su	no	N/A	0.965	0.021	0.361	3e-13

>sp|Q9W3W5|WIF1_DROME Protein shifted OS=Drosophila melanogaster GN=shf PE=1 SV=2

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C+C  GY G YC TA CFPQCLN G CTAP VC+CP G+QG  CEGG    C  KC NG
Sbjct: 298 ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQCEGGI---CKDKCLNG 354

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
           G C  +  CQC KGY G  C  + C   C N G C    +C CP G +G HCE G
Sbjct: 355 GKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIG 409

Required for normal accumulation and movement of lipid-modified hedgehog (hh) morphogen. May act by stabilizing the interaction between heparan sulfate proteoglycans (HSPGs) and hh, HSPGs being required for diffusion of hh morphogen. Not involved in wingless (wg) morphogen movement, suggesting that it may provide HSPG specificity for Hh.
Drosophila melanogaster (taxid: 7227)

>sp|Q6IN38|WIF1_RAT Wnt inhibitory factor 1 OS=Rattus norvegicus GN=Wif1 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 29/141 (20%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
           +C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+              
Sbjct: 197 VCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSATCFNGGTC 256

Query: 49  --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
             PG     PG          C Q C NGG C  +  C+CPKGYQG  C   +C P C  
Sbjct: 257 FYPGKCICPPGLEGEQCELSKCPQPCRNGGKCIGKSKCKCPKGYQGDLCSKPVCEPGCGA 316

Query: 92  NGTCTAPGVCSCPPGFQGLHC 112
           +GTC  P  C C  G+ G HC
Sbjct: 317 HGTCHEPNKCQCREGWHGRHC 337

Binds to WNT proteins and inhibits their activities. May be involved in mesoderm segmentation.

Rattus norvegicus (taxid: 10116)

>sp|Q9WUA1|WIF1_MOUSE Wnt inhibitory factor 1 OS=Mus musculus GN=Wif1 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 29/141 (20%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
           +C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+              
Sbjct: 197 VCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC 256

Query: 49  --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
             PG     PG          C Q C NGG C  +  C+CPKGYQG  C   +C P C  
Sbjct: 257 FYPGKCICPPGLEGEQCELSKCPQPCRNGGKCIGKSKCKCPKGYQGDLCSKPVCEPGCGA 316

Query: 92  NGTCTAPGVCSCPPGFQGLHC 112
           +GTC  P  C C  G+ G HC
Sbjct: 317 HGTCHEPNKCQCREGWHGRHC 337

Binds to WNT proteins and inhibits their activities. May be involved in mesoderm segmentation.

Mus musculus (taxid: 10090)

>sp|Q9W6F9|WIF1_DANRE Wnt inhibitory factor 1 OS=Danio rerio GN=wif1 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 29/141 (20%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
           +C+C  G+ G +C  A+C P+CLN G C +PGVC CPPG+ G  CE              
Sbjct: 195 VCECQDGFYGVHCEKALCSPRCLNGGLCMSPGVCICPPGYFGSSCERANCSTTCLNGGTC 254

Query: 49  --PGP---------------GCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
             PG                 C Q C NGG C  +  C+C KGY G  C  A+C P C  
Sbjct: 255 FHPGKCICAVSFEGVRCELSKCRQPCRNGGKCTGRNKCKCSKGYHGDLCSKAVCEPSCGA 314

Query: 92  NGTCTAPGVCSCPPGFQGLHC 112
           +GTC  P  C C  G+ G HC
Sbjct: 315 HGTCVEPNRCQCREGWHGRHC 335

Binds to WNT proteins and inhibits their activities. May be involved in mesoderm segmentation.

Danio rerio (taxid: 7955)

>sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 1    MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
            +C C +GY G     ++C P C+N G C  P  CSCP G+ G  C     P C QKC NG
Sbjct: 1473 VCVCREGYTGRRFQKSICDPTCMNGGKCVGPSTCSCPSGWSGKRCNT---PICLQKCKNG 1529

Query: 61   GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
            G C +  +C CP  ++G  C   +C P+CL  G C  P VCSC   + G+ CE
Sbjct: 1530 GECIAPSICHCPSSWEGVRCQIPICNPKCLYGGRCIFPNVCSCRTEYSGVKCE 1582

Homo sapiens (taxid: 9606)

>sp|Q9Y5W5|WIF1_HUMAN Wnt inhibitory factor 1 OS=Homo sapiens GN=WIF1 PE=1 SV=3

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 70/141 (49%), Gaps = 29/141 (20%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
           +C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+              
Sbjct: 197 ICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC 256

Query: 49  --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
             PG     PG          C Q C NGG C  +  C+C KGYQG  C   +C P C  
Sbjct: 257 FYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGA 316

Query: 92  NGTCTAPGVCSCPPGFQGLHC 112
           +GTC  P  C C  G+ G HC
Sbjct: 317 HGTCHEPNKCQCQEGWHGRHC 337

Binds to WNT proteins and inhibits their activities. May be involved in mesoderm segmentation.

Homo sapiens (taxid: 9606)

>sp|Q9W6F8|WIF1_XENLA Wnt inhibitory factor 1 OS=Xenopus laevis GN=wif1 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C CP GY G  C    C   CLN GTC  PG C CP G++G  CE      C Q C NG
Sbjct: 224 LCICPPGYYGINCDKVNCTTHCLNGGTCFYPGKCICPSGYEGEQCETSK---CQQPCRNG 280

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
           G C  +  C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G +C
Sbjct: 281 GKCSGKNKCKCSKGYQGDLCSKPVCEPSCGAHGTCIEPNKCQCKEGWNGRYC 332

Binds to WNT proteins and inhibits their activities. May be involved in mesoderm segmentation.

Xenopus laevis (taxid: 8355)

>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 59/130 (45%), Gaps = 19/130 (14%)

Query: 1    MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
            +C+C  GY G++C   +  C P  C + GTC        CSCP GF G  CE        
Sbjct: 3847 LCKCLPGYAGSWCEIDIDECLPSPCHSGGTCHNLVGGFSCSCPDGFTGRACERDINECLQ 3906

Query: 55   QKCSNGGWCDS---QQMCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPGV----CSC 103
              C NG  C +      C C  GY G  C +++    C P C N G+C + GV    C C
Sbjct: 3907 SPCKNGAICQNFPGSFNCVCKTGYTGKMCESSVNYCECNP-CFNGGSCQS-GVDSYYCHC 3964

Query: 104  PPGFQGLHCE 113
            P G  G HCE
Sbjct: 3965 PFGVFGKHCE 3974

May function in the regulation of planar cell polarity (By similarity). Cadherins are cell-cell interaction molecules.

Homo sapiens (taxid: 9606)

>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 19/129 (14%)

Query: 2    CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
            C+C  GY G++C   +  C P  C N GTC        CSCP GF G  CE         
Sbjct: 3850 CKCVPGYAGSWCEVDIDECLPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECLPS 3909

Query: 56   KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPGV----CSCP 104
             C +G  C +      C C  GY G  C +++    C P C N G+C + GV    C CP
Sbjct: 3910 PCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCECNP-CFNGGSCQS-GVESYYCHCP 3967

Query: 105  PGFQGLHCE 113
             G  G HCE
Sbjct: 3968 FGVFGKHCE 3976

May function in the regulation of planar cell polarity. Cadherins are cell-cell interaction molecules.

Mus musculus (taxid: 10090)

>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft PE=1 SV=3

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 18/130 (13%)

Query: 2    CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCDQ 55
            CQC  G+ G  C      C P  C +   C   G    C CP    G HCE      C  
Sbjct: 3999 CQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERSDVCYS 4058

Query: 56   K-CSNGGWCD-----SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA--PGV-CSC 103
            K C NGG C      S   C C  G++G  C +    C P  CL+ G C +  PG  C+C
Sbjct: 4059 KPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCESVSDSCRPNPCLHGGLCVSLKPGYKCNC 4118

Query: 104  PPGFQGLHCE 113
             PG  G HCE
Sbjct: 4119 TPGRYGRHCE 4128

Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
328700417	394	PREDICTED: protein shifted-like [Acyrtho	0.965	0.284	0.582	9e-28
357609882	327	Wnt inhibitory factor 1 precursor [Danau	0.974	0.345	0.568	9e-28
91094771	352	PREDICTED: similar to AGAP000117-PA [Tri	0.974	0.321	0.551	5e-27
332373044	357	unknown [Dendroctonus ponderosae]	0.948	0.308	0.557	1e-26
158289281	383	AGAP000117-PA [Anopheles gambiae str. PE	0.974	0.295	0.534	4e-26
114052190	360	Wnt inhibitory factor 1 precursor [Bomby	0.974	0.313	0.543	2e-25
194764176	458	GF20838 [Drosophila ananassae] gi|190619	0.965	0.244	0.539	2e-25
157129181	366	hypothetical protein AaeL_AAEL011386 [Ae	0.974	0.308	0.525	4e-25
157129179	379	hypothetical protein AaeL_AAEL011386 [Ae	0.974	0.298	0.525	4e-25
321454596	335	hypothetical protein DAPPUDRAFT_116992 [	0.948	0.328	0.539	4e-25

>gi|328700417|ref|XP_003241249.1| PREDICTED: protein shifted-like [Acyrthosiphon pisum]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/115 (58%), Positives = 76/115 (66%), Gaps = 3/115 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQCP+GY G YC TA+C+PQC+NNGTC APGVC CP GFQG HCEGG    C +KC NG
Sbjct: 207 ICQCPEGYMGQYCKTALCYPQCMNNGTCVAPGVCRCPQGFQGPHCEGGI---CAEKCLNG 263

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
           G C  +  CQCPKG+ G  C  + C   CLN G C     C C  GFQG HCE G
Sbjct: 264 GKCIQKDTCQCPKGFYGLRCEYSKCIIPCLNGGKCKGVNKCRCIFGFQGDHCEIG 318

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609882|gb|EHJ66731.1| Wnt inhibitory factor 1 precursor [Danaus plexippus]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 77/116 (66%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQCP+GY G +C TA+C+PQC+N G CTAPGVCSCPPG+QG HCEGG    C QKC NG
Sbjct: 159 ICQCPEGYMGQHCRTALCYPQCMNGGNCTAPGVCSCPPGYQGRHCEGGI---CSQKCLNG 215

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C+CPKGY G +C  + C   CLN G C     C CP G  G HCE G 
Sbjct: 216 GKCIQKDTCECPKGYYGLHCEFSKCVIPCLNGGRCKGVNKCRCPAGLGGNHCEVGR 271

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094771|ref|XP_967866.1| PREDICTED: similar to AGAP000117-PA [Tribolium castaneum] gi|270016572|gb|EFA13018.1| shifted [Tribolium castaneum]

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 77/116 (66%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQC +GY G YC TA+C+PQC+N G CT+PG+CSCPPGFQG HCEGG    C +KC NG
Sbjct: 202 ICQCSEGYMGQYCQTALCYPQCMNGGNCTSPGICSCPPGFQGRHCEGGI---CGEKCLNG 258

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C+C KGY G +C  + C   CLN G C     C CP GF+G HCE G 
Sbjct: 259 GKCVQKDTCECSKGYYGPHCEYSKCIIPCLNGGKCRGINKCRCPQGFRGDHCEIGK 314

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373044|gb|AEE61663.1| unknown [Dendroctonus ponderosae]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 75/113 (66%), Gaps = 3/113 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQCP+GY G YC TA+C+PQC+N G CT+PGVCSCP GFQG HCEGG    C +KC NG
Sbjct: 203 ICQCPEGYMGQYCKTALCYPQCMNGGNCTSPGVCSCPTGFQGTHCEGGI---CSKKCLNG 259

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
           G C  +  C+C KGY G  C  + C   CLN+G C     C C  GF+G HCE
Sbjct: 260 GKCVQKDTCECSKGYYGPRCEFSRCIIPCLNDGRCRGVNKCKCLRGFRGDHCE 312

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158289281|ref|XP_311028.4| AGAP000117-PA [Anopheles gambiae str. PEST] gi|157018979|gb|EAA06354.4| AGAP000117-PA [Anopheles gambiae str. PEST]

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 75/116 (64%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQCP+GY G YC TA+C+PQC+N G CTAPG CSCPPG+QG HCEGG    C +KC NG
Sbjct: 224 ICQCPEGYMGQYCQTALCYPQCMNGGNCTAPGTCSCPPGYQGRHCEGGI---CAEKCQNG 280

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C+C KGY G  C  + C   CL++G C     C C PG  G HC+ G 
Sbjct: 281 GKCIQKDKCECTKGYYGLRCEYSKCVIPCLHDGKCRGVNKCRCKPGLSGDHCQIGR 336

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|114052190|ref|NP_001040227.1| Wnt inhibitory factor 1 precursor [Bombyx mori] gi|87248443|gb|ABD36274.1| Wnt inhibitory factor 1 precursor [Bombyx mori]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 74/116 (63%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQCP+GY G +C TA+C+PQC+N G CTAPG+CSCP G+QG HCEGG    C QKC NG
Sbjct: 208 ICQCPEGYMGQHCRTALCYPQCMNGGNCTAPGLCSCPQGYQGRHCEGGI---CAQKCMNG 264

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C CPKG+ G  C  + C   CLN G C     C CP G  G HCE G 
Sbjct: 265 GKCIQKDTCFCPKGHYGRRCEFSKCVIPCLNGGRCVGVNKCRCPAGLGGDHCEVGR 320

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194764176|ref|XP_001964206.1| GF20838 [Drosophila ananassae] gi|190619131|gb|EDV34655.1| GF20838 [Drosophila ananassae]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 73/115 (63%), Gaps = 3/115 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C+C  GY G YC TA CFPQCLN G CTAP VC+CP G+QG  CEGG    C +KC NG
Sbjct: 306 ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPDGYQGTQCEGGI---CKEKCLNG 362

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
           G C  +  CQC KGY G +C  + C   C+N+G C    +C CP GF G HCE G
Sbjct: 363 GKCIQKDKCQCSKGYYGLHCEYSKCVIPCMNSGRCIGNNMCRCPSGFNGNHCEIG 417

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129181|ref|XP_001655312.1| hypothetical protein AaeL_AAEL011386 [Aedes aegypti] gi|108872309|gb|EAT36534.1| AAEL011386-PA [Aedes aegypti]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/116 (52%), Positives = 74/116 (63%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C CP+GY G YC TA+C+PQC+N G CTAPG CSCPPG+QG HCEGG    C +KC NG
Sbjct: 206 ICVCPEGYMGQYCQTALCYPQCMNGGNCTAPGNCSCPPGYQGRHCEGGI---CAEKCLNG 262

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C+C KGY G  C  + C   CL++G C     C C PG  G HC+ G 
Sbjct: 263 GKCIQKDKCECTKGYYGLRCEFSKCVIPCLHDGKCKGVNKCRCKPGLSGDHCQIGR 318

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129179|ref|XP_001655311.1| hypothetical protein AaeL_AAEL011386 [Aedes aegypti] gi|108872308|gb|EAT36533.1| AAEL011386-PB [Aedes aegypti]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/116 (52%), Positives = 74/116 (63%), Gaps = 3/116 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C CP+GY G YC TA+C+PQC+N G CTAPG CSCPPG+QG HCEGG    C +KC NG
Sbjct: 219 ICVCPEGYMGQYCQTALCYPQCMNGGNCTAPGNCSCPPGYQGRHCEGGI---CAEKCLNG 275

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
           G C  +  C+C KGY G  C  + C   CL++G C     C C PG  G HC+ G 
Sbjct: 276 GKCIQKDKCECTKGYYGLRCEFSKCVIPCLHDGKCKGVNKCRCKPGLSGDHCQIGR 331

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321454596|gb|EFX65761.1| hypothetical protein DAPPUDRAFT_116992 [Daphnia pulex]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 73/113 (64%), Gaps = 3/113 (2%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +CQC +GY G +C TA+C+PQC+N G+CT+PG+CSCP GFQG HCEGG    C  KC NG
Sbjct: 179 ICQCLEGYMGQHCRTALCYPQCMNGGSCTSPGMCSCPSGFQGRHCEGGI---CKDKCLNG 235

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
           G C  +  C CPKG+ G  C    C   CLN G C     C C PGF+G HCE
Sbjct: 236 GKCIQKDTCDCPKGFYGLRCEFTKCVIPCLNGGRCKGVNKCRCSPGFKGDHCE 288

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
FB|FBgn0003390	456	shf "shifted" [Drosophila mela	0.965	0.245	0.530	2.5e-33
UNIPROTKB|F1NPY0	828	VWDE "Uncharacterized protein"	0.939	0.131	0.491	5.9e-30
MGI|MGI:1344332	379	Wif1 "Wnt inhibitory factor 1"	0.931	0.284	0.468	1.7e-27
RGD|619774	379	Wif1 "Wnt inhibitory factor 1"	0.931	0.284	0.468	1.7e-27
UNIPROTKB|E1BNM8	381	WIF1 "Uncharacterized protein"	0.931	0.283	0.459	4.5e-27
UNIPROTKB|Q9Y5W5	379	WIF1 "Wnt inhibitory factor 1"	0.931	0.284	0.459	9.4e-27
UNIPROTKB|E2R4E3	379	WIF1 "Uncharacterized protein"	0.931	0.284	0.459	9.4e-27
ZFIN|ZDB-GENE-990712-17	378	wif1 "wnt inhibitory factor 1"	0.939	0.288	0.455	1.9e-26
UNIPROTKB|F1NHY7	384	WIF1 "Uncharacterized protein"	0.939	0.283	0.410	2.5e-26
UNIPROTKB|D4AEB5	850	Vwde "Protein Vwde" [Rattus no	0.948	0.129	0.442	3.6e-26

FB|FBgn0003390 shf "shifted" [Drosophila melanogaster (taxid:7227)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 61/115 (53%), Positives = 69/115 (60%)

Query:     1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             +C+C  GY G YC TA CFPQCLN G CTAP VC+CP G+QG  CEGG    C  KC NG
Sbjct:   298 ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQCEGGI---CKDKCLNG 354

Query:    61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
             G C  +  CQC KGY G  C  + C   C N G C    +C CP G +G HCE G
Sbjct:   355 GKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIG 409

GO:0050821 "protein stabilization" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016055 "Wnt receptor signaling pathway" evidence=IMP

GO:0007224 "smoothened signaling pathway" evidence=IGI;IMP

GO:0008589 "regulation of smoothened signaling pathway" evidence=IMP

GO:0005576 "extracellular region" evidence=IDA

GO:0008039 "synaptic target recognition" evidence=IMP

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=IMP

UNIPROTKB|F1NPY0 VWDE "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 341 (125.1 bits), Expect = 5.9e-30, P = 5.9e-30
 Identities = 55/112 (49%), Positives = 65/112 (58%)

Query:     1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             +CQC  G+ G  C TAMC P CLN G+CT PGVC CP GF G  C+      C   C NG
Sbjct:   670 ICQCKSGWYGPTCSTAMCDPVCLNGGSCTKPGVCLCPHGFYGARCQNAV---CRPPCKNG 726

Query:    61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
             G C    +C CP+GY G  C  ++C P C+N G C  P VCSCP G+ G  C
Sbjct:   727 GHCMRNNICTCPEGYTGRRCEKSVCEPTCMNGGRCVGPNVCSCPSGWSGKKC 778

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:1344332 Wif1 "Wnt inhibitory factor 1" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 52/111 (46%), Positives = 59/111 (53%)

Query:     2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct:   230 CICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCELSK---CPQPCRNGG 286

Query:    62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C  +  C+CPKGYQG  C   +C P C  +GTC  P  C C  G+ G HC
Sbjct:   287 KCIGKSKCKCPKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCREGWHGRHC 337

GO:0005576 "extracellular region" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0017147 "Wnt-protein binding" evidence=ISO

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=ISO

GO:0045600 "positive regulation of fat cell differentiation" evidence=IDA

RGD|619774 Wif1 "Wnt inhibitory factor 1" [Rattus norvegicus (taxid:10116)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 52/111 (46%), Positives = 59/111 (53%)

Query:     2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct:   230 CICPPGFYGVNCDKANCSATCFNGGTCFYPGKCICPPGLEGEQCELSK---CPQPCRNGG 286

Query:    62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C  +  C+CPKGYQG  C   +C P C  +GTC  P  C C  G+ G HC
Sbjct:   287 KCIGKSKCKCPKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCREGWHGRHC 337

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA;ISO

UNIPROTKB|E1BNM8 WIF1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 51/111 (45%), Positives = 58/111 (52%)

Query:     2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct:   232 CICPPGFYGVNCDKANCSATCFNGGTCFYPGKCICPPGLEGEQCETSK---CPQPCRNGG 288

Query:    62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C  +  C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G HC
Sbjct:   289 KCIGKNKCKCSKGYQGDLCSKPVCKPGCGTHGTCHEPNKCQCREGWHGRHC 339

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

UNIPROTKB|Q9Y5W5 WIF1 "Wnt inhibitory factor 1" [Homo sapiens (taxid:9606)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 51/111 (45%), Positives = 58/111 (52%)

Query:     2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct:   230 CICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISK---CPQPCRNGG 286

Query:    62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C  +  C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G HC
Sbjct:   287 KCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHC 337

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0007165 "signal transduction" evidence=NAS

UNIPROTKB|E2R4E3 WIF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 51/111 (45%), Positives = 58/111 (52%)

Query:     2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct:   230 CICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISK---CPQPCRNGG 286

Query:    62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C  +  C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G HC
Sbjct:   287 KCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHC 337

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

ZFIN|ZDB-GENE-990712-17 wif1 "wnt inhibitory factor 1" [Danio rerio (taxid:7955)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 51/112 (45%), Positives = 60/112 (53%)

Query:     1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             +C CP GY G+ C  A C   CLN GTC  PG C C   F+G+ CE      C Q C NG
Sbjct:   227 VCICPPGYFGSSCERANCSTTCLNGGTCFHPGKCICAVSFEGVRCELSK---CRQPCRNG 283

Query:    61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
             G C  +  C+C KGY G  C  A+C P C  +GTC  P  C C  G+ G HC
Sbjct:   284 GKCTGRNKCKCSKGYHGDLCSKAVCEPSCGAHGTCVEPNRCQCREGWHGRHC 335

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IDA

GO:0005576 "extracellular region" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

UNIPROTKB|F1NHY7 WIF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 46/112 (41%), Positives = 61/112 (54%)

Query:     1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             +C+CP G+ G +C  A+C P+C+N G C  PG+C CPPGF G++C+      C   C NG
Sbjct:   202 VCECPDGFYGPHCEKALCAPRCMNGGLCITPGLCICPPGFYGINCDKA---NCTTTCFNG 258

Query:    61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
             G C     C CP G++G  C  + C   C N G C     C C  G+QG  C
Sbjct:   259 GTCFYLGKCICPSGFEGDQCEISKCHQPCRNGGKCMGKNKCKCSKGYQGDLC 310

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

UNIPROTKB|D4AEB5 Vwde "Protein Vwde" [Rattus norvegicus (taxid:10116)]

 Score = 306 (112.8 bits), Expect = 3.6e-26, P = 3.6e-26
 Identities = 50/113 (44%), Positives = 63/113 (55%)

Query:     1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             +C C  GY G  C T++C P C+N G C  P +CSC  G+ G  C     P C QKC NG
Sbjct:   733 VCTCRGGYTGKRCQTSICEPMCMNGGKCVGPNICSCASGWSGKWCNT---PICLQKCKNG 789

Query:    61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
             G C +  MC CP  ++G  C   +C  +CL  G C  PGVCSC  G+ G+ CE
Sbjct:   790 GECVAPSMCHCPSTWEGVQCEKPICTQKCLYGGRCAFPGVCSCRTGYSGVKCE 842

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W3W5	WIF1_DROME	No assigned EC number	0.5304	0.9655	0.2456	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG1225|consensus	525		99.76
KOG1225|consensus	525		99.7
KOG1219|consensus	4289		99.51
KOG1226|consensus	783		99.47
KOG4289|consensus	2531		99.28
KOG4289|consensus	2531		99.04
KOG1219|consensus	4289		99.02
KOG1226|consensus	783		98.9
KOG1214|consensus	1289		98.37
KOG1217|consensus	487		98.13
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	98.0
KOG1217|consensus	487		97.98
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.7
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	97.56
smart00051	63	DSL delta serrate ligand.	97.55
smart00051	63	DSL delta serrate ligand.	97.48
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.46
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.09
KOG4260|consensus	350		96.83
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.82
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.74
KOG0994|consensus	1758		96.66
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.36
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.33
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	96.28
KOG4260|consensus	350		96.06
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.04
KOG1214|consensus	1289		95.72
smart00181	35	EGF Epidermal growth factor-like domain.	95.62
KOG1836|consensus	1705		94.51
PHA02887	126	EGF-like protein; Provisional	94.45
KOG1836|consensus	1705		94.42
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	94.24
PF12662	24	cEGF: Complement Clr-like EGF-like	93.97
KOG0994|consensus	1758		93.67
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	93.27
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	92.95
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	92.32
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	91.1
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	88.73
KOG3607|consensus	716		88.57
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	88.0
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	87.92
KOG3607|consensus	716		83.36

>KOG1225|consensus

Probab=99.76  E-value=7.4e-18  Score=111.09  Aligned_cols=108  Identities=40%  Similarity=1.039  Sum_probs=85.4

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      +|.|..+|+|.+|+...|...|.+.+.|+. ++|+|++||+|.+|+...   ++..|+.++.+.. +.|+|+++|.|..|
T Consensus       235 ic~c~~~~~g~~c~~~~C~~~c~~~g~c~~-G~CIC~~Gf~G~dC~e~~---Cp~~cs~~g~~~~-g~CiC~~g~~G~dC  309 (525)
T KOG1225|consen  235 ICECPEGYFGPLCSTIYCPGGCTGRGQCVE-GRCICPPGFTGDDCDELV---CPVDCSGGGVCVD-GECICNPGYSGKDC  309 (525)
T ss_pred             eeecCCceeCCccccccCCCCCcccceEeC-CeEeCCCCCcCCCCCccc---CCcccCCCceecC-CEeecCCCcccccc
Confidence            367788888888887778777887788875 788888888888887533   4445777777776 58888888888888


Q ss_pred             CCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      ++..|+..|+++|.|+ .++|.|.+||+|..|+.
T Consensus       310 s~~~cpadC~g~G~Ci-~G~C~C~~Gy~G~~C~~  342 (525)
T KOG1225|consen  310 SIRRCPADCSGHGKCI-DGECLCDEGYTGELCIQ  342 (525)
T ss_pred             ccccCCccCCCCCccc-CCceEeCCCCcCCcccc
Confidence            8777778888888888 57888888888888865

>KOG1225|consensus

Probab=99.70  E-value=1.1e-16  Score=105.72  Aligned_cols=100  Identities=36%  Similarity=0.993  Sum_probs=89.2

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      +|.|++||+|.+|+...|...|+.++.+++ +.|.|+++|.|..|+...   ++..|.++|.|+ .+.|.|.+||+|..|
T Consensus       266 ~CIC~~Gf~G~dC~e~~Cp~~cs~~g~~~~-g~CiC~~g~~G~dCs~~~---cpadC~g~G~Ci-~G~C~C~~Gy~G~~C  340 (525)
T KOG1225|consen  266 RCICPPGFTGDDCDELVCPVDCSGGGVCVD-GECICNPGYSGKDCSIRR---CPADCSGHGKCI-DGECLCDEGYTGELC  340 (525)
T ss_pred             eEeCCCCCcCCCCCcccCCcccCCCceecC-CEeecCCCcccccccccc---CCccCCCCCccc-CCceEeCCCCcCCcc
Confidence            489999999999999889888999898886 699999999999998554   567899999999 489999999999999


Q ss_pred             CCCCCCCCCCCCcEecCCCceeCCCCCcCCC
Q psy6687          81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLH  111 (116)
Q Consensus        81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~  111 (116)
                      ...   . |.+++.|++ + |.|..||.|++
T Consensus       341 ~~~---~-C~~~g~cv~-g-C~C~~Gw~G~d  365 (525)
T KOG1225|consen  341 IQR---A-CSGGGQCVN-G-CKCKKGWRGPD  365 (525)
T ss_pred             ccc---c-cCCCceecc-C-ceeccCccCCC
Confidence            977   3 889999997 5 99999999987

>KOG1219|consensus

Probab=99.51  E-value=3.9e-14  Score=104.26  Aligned_cols=97  Identities=35%  Similarity=0.864  Sum_probs=84.9

Q ss_pred             CCCC-CCCCCcEecC----CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCC---CCceecCCCCcCCCCCCC---CC
Q psy6687          17 MCFP-QCLNNGTCTA----PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTA---MC   85 (116)
Q Consensus        17 ~c~~-~c~~~g~C~~----~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~---~~~c~C~~g~~g~~c~~~---~c   85 (116)
                      .|.. +|+++|.|..    .|.|+|++.|.|..|+.+..+|...||..+|+|..   .+.|.|+.+|+|.+|+..   +|
T Consensus      3866 ~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~Gi~eC 3945 (4289)
T KOG1219|consen 3866 PCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEARGISEC 3945 (4289)
T ss_pred             ccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeeccccccc
Confidence            4543 6999999975    58999999999999999999999999999999975   368999999999999854   57


Q ss_pred             C-CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          86 F-PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        86 ~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                      . ++|.++|.|.+   ++.|.|.+||.|..|.
T Consensus      3946 s~n~C~~gg~C~n~~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3946 SKNVCGTGGQCINIPGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred             ccccccCCceeeccCCceEeccChhHhcccCc
Confidence            7 78999999986   3789999999999874

>KOG1226|consensus

Probab=99.47  E-value=5.3e-13  Score=90.62  Aligned_cols=112  Identities=30%  Similarity=0.792  Sum_probs=86.7

Q ss_pred             CccCCCCCcCCCCCCC-----------CCCC-----CCCCCcEecCCCceeCCCCCc----cCCCCCCCCCCCCC---CC
Q psy6687           1 MCQCPKGYQGTYCGTA-----------MCFP-----QCLNNGTCTAPGVCSCPPGFQ----GLHCEGGPGPGCDQ---KC   57 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~-----------~c~~-----~c~~~g~C~~~~~C~c~~g~~----g~~c~~~~~~~~~~---~c   57 (116)
                      +|.|.+||.|..|+.+           .|..     .|++.|.|.- ++|.|.+...    |++|+-+.-.|...   .|
T Consensus       479 ~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C-GqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC  557 (783)
T KOG1226|consen  479 QCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVC-GQCVCHKPDNGKIYGKFCECDNFSCERHKGVLC  557 (783)
T ss_pred             ceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeC-CceEecCCCCCceeeeeeeccCcccccccCccc
Confidence            5899999999988642           1322     4899999986 8999988776    89998655444332   48


Q ss_pred             CCCceeCCCCceecCCCCcCCCCCC----CCCC----CCCCCCcEecCCCceeCCCC-CcCCCCCCC
Q psy6687          58 SNGGWCDSQQMCQCPKGYQGTYCGT----AMCF----PQCLNNGTCTAPGVCSCPPG-FQGLHCEGG  115 (116)
Q Consensus        58 ~~~g~c~~~~~c~C~~g~~g~~c~~----~~c~----~~c~~~g~c~~~~~C~C~~g-~~g~~C~~~  115 (116)
                      ..+|.|.. ++|+|.+||+|..|+-    +.|.    ..|+.+|+|.- ++|.|... |.|+.||+.
T Consensus       558 ~g~G~C~C-G~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~C-g~C~C~~~~~sG~~CE~c  622 (783)
T KOG1226|consen  558 GGHGRCEC-GRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCEC-GRCKCTDPPYSGEFCEKC  622 (783)
T ss_pred             CCCCeEeC-CcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceeeC-CceEcCCCCcCcchhhcC
Confidence            89999987 8999999999999983    2344    35888888886 78999765 999999864

>KOG4289|consensus

Probab=99.28  E-value=2.8e-12  Score=92.04  Aligned_cols=84  Identities=38%  Similarity=0.863  Sum_probs=71.9

Q ss_pred             CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCC---CCceecCCCCcCCCCCCC----CCC-CCCCCCcEecC----C
Q psy6687          31 PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTA----MCF-PQCLNNGTCTA----P   98 (116)
Q Consensus        31 ~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~---~~~c~C~~g~~g~~c~~~----~c~-~~c~~~g~c~~----~   98 (116)
                      .++|.|++||+|++|+..++.|-..+|.++|.|..   .++|.|.++|+|.+|+++    -|. ..|.++|+|++    .
T Consensus      1221 glrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~ngg 1300 (2531)
T KOG4289|consen 1221 GLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLLNGG 1300 (2531)
T ss_pred             ceeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccCccccceecCCCEEeecCCCc
Confidence            46899999999999999999999999999999975   379999999999999964    244 67999999984    2


Q ss_pred             CceeCCCC-CcCCCCCC
Q psy6687          99 GVCSCPPG-FQGLHCEG  114 (116)
Q Consensus        99 ~~C~C~~g-~~g~~C~~  114 (116)
                      +.|.|++| |.+++|+.
T Consensus      1301 f~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1301 FCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             eeccCCCcccCCCceEE
Confidence            68999986 67888874

>KOG4289|consensus

Probab=99.04  E-value=2.3e-10  Score=82.72  Aligned_cols=82  Identities=41%  Similarity=1.032  Sum_probs=66.6

Q ss_pred             CccCCCCCcCCCCCC--CCC-CCCCCCCcEecC---CCceeCCCCCccCCCCCC--CCCCCCCCCCCCceeCCC----Cc
Q psy6687           1 MCQCPKGYQGTYCGT--AMC-FPQCLNNGTCTA---PGVCSCPPGFQGLHCEGG--PGPGCDQKCSNGGWCDSQ----QM   68 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~--~~c-~~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~--~~~~~~~~c~~~g~c~~~----~~   68 (116)
                      .|.|++||+|+.|+.  +.| ..+|.++|+|..   .|.|.|.++|+|.+|+.+  ...|.+..|.++|.|.+.    +.
T Consensus      1223 rCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~nggf~ 1302 (2531)
T KOG4289|consen 1223 RCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLLNGGFC 1302 (2531)
T ss_pred             eEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccCccccceecCCCEEeecCCCcee
Confidence            489999999999975  457 447999999975   689999999999999843  345666779999999763    57


Q ss_pred             eecCCC-CcCCCCCC
Q psy6687          69 CQCPKG-YQGTYCGT   82 (116)
Q Consensus        69 c~C~~g-~~g~~c~~   82 (116)
                      |.|+.| |.++.|+.
T Consensus      1303 c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1303 CHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             ccCCCcccCCCceEE
Confidence            899976 67888874

>KOG1219|consensus

Probab=99.02  E-value=3.7e-10  Score=84.45  Aligned_cols=81  Identities=35%  Similarity=0.885  Sum_probs=71.0

Q ss_pred             CccCCCCCcCCCCCCC--CCCC-CCCCCcEecC---CCceeCCCCCccCCCCCC-CCCCCCCCCCCCceeCCC---Ccee
Q psy6687           1 MCQCPKGYQGTYCGTA--MCFP-QCLNNGTCTA---PGVCSCPPGFQGLHCEGG-PGPGCDQKCSNGGWCDSQ---QMCQ   70 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~--~c~~-~c~~~g~C~~---~~~C~c~~g~~g~~c~~~-~~~~~~~~c~~~g~c~~~---~~c~   70 (116)
                      +|.|+..|.|.+||..  .|.. ||..+|+|..   .+.|.|+.+|+|..|++. +.+|...+|.++|.|.+.   +.|.
T Consensus      3887 ~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~Cn 3966 (4289)
T KOG1219|consen 3887 KCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEARGISECSKNVCGTGGQCINIPGSFHCN 3966 (4289)
T ss_pred             EEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeecccccccccccccCCceeeccCCceEec
Confidence            5899999999999864  4754 7999999974   688999999999999987 788988999999999874   6899


Q ss_pred             cCCCCcCCCCC
Q psy6687          71 CPKGYQGTYCG   81 (116)
Q Consensus        71 C~~g~~g~~c~   81 (116)
                      |.++|.|..|.
T Consensus      3967 cT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3967 CTPGILGRTCC 3977 (4289)
T ss_pred             cChhHhcccCc
Confidence            99999998875

>KOG1226|consensus

Probab=98.90  E-value=8.9e-09  Score=70.69  Aligned_cols=89  Identities=35%  Similarity=0.834  Sum_probs=67.7

Q ss_pred             CCCCcEecCCCceeCCCCCccCCCCCCCC---------CCC----CCCCCCCceeCCCCceecCCCCc----CCCCCCC-
Q psy6687          22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPG---------PGC----DQKCSNGGWCDSQQMCQCPKGYQ----GTYCGTA-   83 (116)
Q Consensus        22 c~~~g~C~~~~~C~c~~g~~g~~c~~~~~---------~~~----~~~c~~~g~c~~~~~c~C~~g~~----g~~c~~~-   83 (116)
                      |+.+|+.+. +.|.|.+||.|+.|+-..+         .|.    ..+|++.|.|.- ++|+|.+...    |.+|+-+ 
T Consensus       469 C~g~G~~~C-G~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C-GqC~C~~~~~~~i~G~fCECDn  546 (783)
T KOG1226|consen  469 CHGNGTFVC-GQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVC-GQCVCHKPDNGKIYGKFCECDN  546 (783)
T ss_pred             cCCCCcEEe-cceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeC-CceEecCCCCCceeeeeeeccC
Confidence            766676664 7999999999999973321         111    125888888877 7999987665    8888743 


Q ss_pred             -CCC----CCCCCCcEecCCCceeCCCCCcCCCCC
Q psy6687          84 -MCF----PQCLNNGTCTAPGVCSCPPGFQGLHCE  113 (116)
Q Consensus        84 -~c~----~~c~~~g~c~~~~~C~C~~g~~g~~C~  113 (116)
                       .|.    ..|.++|.|.. ++|.|.+||+|..|+
T Consensus       547 fsC~r~~g~lC~g~G~C~C-G~CvC~~GwtG~~C~  580 (783)
T KOG1226|consen  547 FSCERHKGVLCGGHGRCEC-GRCVCNPGWTGSACN  580 (783)
T ss_pred             cccccccCcccCCCCeEeC-CcEEcCCCCccCCCC
Confidence             344    46999999986 899999999999986

>KOG1214|consensus

Probab=98.37  E-value=1.5e-06  Score=60.99  Aligned_cols=109  Identities=30%  Similarity=0.741  Sum_probs=67.4

Q ss_pred             ccCCCCCcCC--CCCC-C---CCCCCCCCCcEecC---CCceeCCCCCc--c--CCCCCCC-----CCCCC--CCCCCCc
Q psy6687           2 CQCPKGYQGT--YCGT-A---MCFPQCLNNGTCTA---PGVCSCPPGFQ--G--LHCEGGP-----GPGCD--QKCSNGG   61 (116)
Q Consensus         2 C~C~~g~~g~--~c~~-~---~c~~~c~~~g~C~~---~~~C~c~~g~~--g--~~c~~~~-----~~~~~--~~c~~~g   61 (116)
                      |.|..+|.|+  .|.. .   .+...|..+.+|++   +++|.|..+|.  +  -.|....     ..|..  ..|...|
T Consensus       718 cecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g  797 (1289)
T KOG1214|consen  718 CECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAG  797 (1289)
T ss_pred             EEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCC
Confidence            5566667654  4532 2   24445888889976   56777776653  3  3443221     11211  1244334


Q ss_pred             ee--CC----CCceecCCCCcCC--CC-CCCCCC-CCCCCCcEecC---CCceeCCCCCcCC
Q psy6687          62 WC--DS----QQMCQCPKGYQGT--YC-GTAMCF-PQCLNNGTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        62 ~c--~~----~~~c~C~~g~~g~--~c-~~~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~  110 (116)
                      .+  +.    .+.|.|.|||.|+  .| +.++|. +.|...++|++   ++.|.|.+||.|.
T Consensus       798 ~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  798 QARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             ceEEEecCCceEEEeecCCccCCccccccccccCccccCCCceEecCCCcceeecccCccCC
Confidence            33  21    2789999999875  33 356776 67999999985   4899999999865

>KOG1217|consensus

Probab=98.13  E-value=3.4e-05  Score=51.55  Aligned_cols=112  Identities=42%  Similarity=1.039  Sum_probs=76.3

Q ss_pred             CccCCCCCcCCCCCCC--CCCC---CCCCCcEecC---CCceeCCCCCccCCCCCC-------------------CCCCC
Q psy6687           1 MCQCPKGYQGTYCGTA--MCFP---QCLNNGTCTA---PGVCSCPPGFQGLHCEGG-------------------PGPGC   53 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~--~c~~---~c~~~g~C~~---~~~C~c~~g~~g~~c~~~-------------------~~~~~   53 (116)
                      .|.|..+|.+..+...  .|..   .|.+.+.|.+   .+.|.|.++|.+..++..                   ...+.
T Consensus       153 ~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~  232 (487)
T KOG1217|consen  153 RCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECE  232 (487)
T ss_pred             eeeeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcc
Confidence            3688999999988753  5652   3778888875   367999999998887643                   10111


Q ss_pred             CC--CCCCC-ceeCCC---CceecCCCCcCCCC----CCCCCC-C-CCCCCcEecCC---CceeCCCCCcCCCC
Q psy6687          54 DQ--KCSNG-GWCDSQ---QMCQCPKGYQGTYC----GTAMCF-P-QCLNNGTCTAP---GVCSCPPGFQGLHC  112 (116)
Q Consensus        54 ~~--~c~~~-g~c~~~---~~c~C~~g~~g~~c----~~~~c~-~-~c~~~g~c~~~---~~C~C~~g~~g~~C  112 (116)
                      ..  .+... +.|...   +.|.++++|.+..+    .++.|. . .|.++++|...   +.|.|+++|+|..+
T Consensus       233 ~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  233 VSIVECASGDGTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             cccccccCCCCcccccCCceeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCC
Confidence            10  12211 555442   57888999998873    345565 2 37888899853   78999999999887

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.00  E-value=1.2e-05  Score=33.94  Aligned_cols=25  Identities=44%  Similarity=1.233  Sum_probs=16.5

Q ss_pred             CCCCCcEecCC-CceeCCCCCcCCCC
Q psy6687          88 QCLNNGTCTAP-GVCSCPPGFQGLHC  112 (116)
Q Consensus        88 ~c~~~g~c~~~-~~C~C~~g~~g~~C  112 (116)
                      .|+++|+|+.. ++|.|.+||+|+.|
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCCC
Confidence            46666777643 67777777777665

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1217|consensus

Probab=97.98  E-value=0.00013  Score=48.80  Aligned_cols=108  Identities=40%  Similarity=1.011  Sum_probs=74.0

Q ss_pred             ccCCCCCcCCCC----CCCCCCC--CCCCCcEecC---CCceeCCCCCccCCC-C-CCCCCC----CCCCCCCCceeCC-
Q psy6687           2 CQCPKGYQGTYC----GTAMCFP--QCLNNGTCTA---PGVCSCPPGFQGLHC-E-GGPGPG----CDQKCSNGGWCDS-   65 (116)
Q Consensus         2 C~C~~g~~g~~c----~~~~c~~--~c~~~g~C~~---~~~C~c~~g~~g~~c-~-~~~~~~----~~~~c~~~g~c~~-   65 (116)
                      |.|.+||.+..+    ....|..  .|.++++|..   .+.|.|+++|.|..+ . .....+    ...+|.+++.|.. 
T Consensus       254 C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~  333 (487)
T KOG1217|consen  254 CRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTL  333 (487)
T ss_pred             eeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccC
Confidence            667788887763    2344543  2777888876   378999999999988 1 122333    2334666666622 


Q ss_pred             ----CCceecCCCCcCCCCCCC--CCC-CCCCCCcEecC----CCceeCCCCCcC
Q psy6687          66 ----QQMCQCPKGYQGTYCGTA--MCF-PQCLNNGTCTA----PGVCSCPPGFQG  109 (116)
Q Consensus        66 ----~~~c~C~~g~~g~~c~~~--~c~-~~c~~~g~c~~----~~~C~C~~g~~g  109 (116)
                          .+.|.+..+|.|..|+..  .|. .++..++.|.+    .+.|.++.+|.+
T Consensus       334 ~~~~~~~C~c~~~~~g~~C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  334 GSFGGFRCACGPGFTGRRCEDSNDECASSPCCPGGTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             CCCCCCCcCCCCCCCCCccccCCccccCCccccCCEeccCCCCCeEecCCCcccc
Confidence                146899999999999855  576 44777788875    368899988776

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.70  E-value=6.1e-05  Score=31.75  Aligned_cols=25  Identities=44%  Similarity=1.233  Sum_probs=20.2

Q ss_pred             CCCCCcEecCC-CceeCCCCCccCCC
Q psy6687          21 QCLNNGTCTAP-GVCSCPPGFQGLHC   45 (116)
Q Consensus        21 ~c~~~g~C~~~-~~C~c~~g~~g~~c   45 (116)
                      .|+++|+|+.. ++|.|.++|+|+.|
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCCC
Confidence            47888999854 78999999988765

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=97.56  E-value=2.5e-05  Score=26.13  Aligned_cols=12  Identities=58%  Similarity=1.818  Sum_probs=6.7

Q ss_pred             eeCCCCCcCCCC
Q psy6687         101 CSCPPGFQGLHC  112 (116)
Q Consensus       101 C~C~~g~~g~~C  112 (116)
                      |.|++||+|.+|
T Consensus         2 C~C~~G~~G~~C   13 (13)
T PF12661_consen    2 CQCPPGWTGPNC   13 (13)
T ss_dssp             EEE-TTEETTTT
T ss_pred             ccCcCCCcCCCC
Confidence            556666666654

>smart00051 DSL delta serrate ligand

Probab=97.55  E-value=0.00019  Score=35.16  Aligned_cols=47  Identities=21%  Similarity=0.395  Sum_probs=27.8

Q ss_pred             CceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687          32 GVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus        32 ~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      +.-.|.++|.|..|+..-.  .......+..|...+.++|.+||.|+.|
T Consensus        17 ~rv~C~~~~yG~~C~~~C~--~~~d~~~~~~Cd~~G~~~C~~Gw~G~~C   63 (63)
T smart00051       17 IRVTCDENYYGEGCNKFCR--PRDDFFGHYTCDENGNKGCLEGWMGPYC   63 (63)
T ss_pred             EEeeCCCCCcCCccCCEeC--cCccccCCccCCcCCCEecCCCCcCCCC
Confidence            3446777888887763211  0011334556655567888888888765

>smart00051 DSL delta serrate ligand

Probab=97.48  E-value=0.00031  Score=34.42  Aligned_cols=44  Identities=27%  Similarity=0.628  Sum_probs=33.2

Q ss_pred             ceecCCCCcCCCCCCCCCC--CCCCCCcEecCCCceeCCCCCcCCCC
Q psy6687          68 MCQCPKGYQGTYCGTAMCF--PQCLNNGTCTAPGVCSCPPGFQGLHC  112 (116)
Q Consensus        68 ~c~C~~g~~g~~c~~~~c~--~~c~~~g~c~~~~~C~C~~g~~g~~C  112 (116)
                      .-.|.++|.|..|+.. |.  .....+.+|...+.+.|.+||+|+.|
T Consensus        18 rv~C~~~~yG~~C~~~-C~~~~d~~~~~~Cd~~G~~~C~~Gw~G~~C   63 (63)
T smart00051       18 RVTCDENYYGEGCNKF-CRPRDDFFGHYTCDENGNKGCLEGWMGPYC   63 (63)
T ss_pred             EeeCCCCCcCCccCCE-eCcCccccCCccCCcCCCEecCCCCcCCCC
Confidence            4578899999999742 32  23456677776688999999999986

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.46  E-value=4.7e-05  Score=32.12  Aligned_cols=23  Identities=48%  Similarity=1.196  Sum_probs=14.3

Q ss_pred             CCCCCcEecC----CCceeCCCCCcCC
Q psy6687          88 QCLNNGTCTA----PGVCSCPPGFQGL  110 (116)
Q Consensus        88 ~c~~~g~c~~----~~~C~C~~g~~g~  110 (116)
                      +|.++|+|+.    .+.|.|++||+|+
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            5666666652    2567777777665

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.09  E-value=0.00015  Score=30.52  Aligned_cols=22  Identities=50%  Similarity=1.281  Sum_probs=10.5

Q ss_pred             CCCCCcEecC----CCceeCCCCCcc
Q psy6687          21 QCLNNGTCTA----PGVCSCPPGFQG   42 (116)
Q Consensus        21 ~c~~~g~C~~----~~~C~c~~g~~g   42 (116)
                      +|+++|+|+.    .+.|.|+++|+|
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCcc
Confidence            3455555542    234555555544

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG4260|consensus

Probab=96.83  E-value=0.003  Score=39.60  Aligned_cols=106  Identities=26%  Similarity=0.649  Sum_probs=59.8

Q ss_pred             CCCCCcCCCCCCCC--CCCCCCCCcEecC------CCceeCCCCCccCCCCCCCC-------CCCCC---CCCC--Ccee
Q psy6687           4 CPKGYQGTYCGTAM--CFPQCLNNGTCTA------PGVCSCPPGFQGLHCEGGPG-------PGCDQ---KCSN--GGWC   63 (116)
Q Consensus         4 C~~g~~g~~c~~~~--c~~~c~~~g~C~~------~~~C~c~~g~~g~~c~~~~~-------~~~~~---~c~~--~g~c   63 (116)
                      |+.|-+|.+|..-+  -..+|.++|.|..      ++.|.|.+||+|+.|..-..       .-...   .|+.  .+.|
T Consensus       132 Cp~gtyGpdCl~Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~C  211 (350)
T KOG4260|consen  132 CPDGTYGPDCLQCPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLGVC  211 (350)
T ss_pred             cCCCCcCCccccCCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhccc
Confidence            67788888875311  1124777777753      57999999999999862100       00000   1111  1233


Q ss_pred             CCC--Cce-ecCCCCcCCC--C-CCCCCC---CCCCCCcEecC---CCceeCCCCCcC
Q psy6687          64 DSQ--QMC-QCPKGYQGTY--C-GTAMCF---PQCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        64 ~~~--~~c-~C~~g~~g~~--c-~~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      ...  ..| .|..||.-+.  | ++++|.   .+|..+-.|++   +|.|...+||.+
T Consensus       212 sg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  212 SGESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             CCCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            321  234 4778886432  2 244453   45666666764   478888888865

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.82  E-value=0.0025  Score=27.57  Aligned_cols=14  Identities=50%  Similarity=1.455  Sum_probs=7.1

Q ss_pred             CceeCCCCCc-CCCC
Q psy6687          99 GVCSCPPGFQ-GLHC  112 (116)
Q Consensus        99 ~~C~C~~g~~-g~~C  112 (116)
                      +.|.|++||. |..|
T Consensus        24 ~~C~C~~g~~~g~~C   38 (39)
T smart00179       24 YRCECPPGYTDGRNC   38 (39)
T ss_pred             eEeECCCCCccCCcC
Confidence            4455555555 4444

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.74  E-value=0.0026  Score=27.54  Aligned_cols=31  Identities=39%  Similarity=0.985  Sum_probs=22.4

Q ss_pred             CCCC-CCCCCCceeCCC---CceecCCCCc-CCCCC
Q psy6687          51 PGCD-QKCSNGGWCDSQ---QMCQCPKGYQ-GTYCG   81 (116)
Q Consensus        51 ~~~~-~~c~~~g~c~~~---~~c~C~~g~~-g~~c~   81 (116)
                      +|.. .+|.+++.|.+.   +.|.|+++|. |..|+
T Consensus         4 ~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        4 ECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             cCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            3444 578777888753   6799999998 77663

>KOG0994|consensus

Probab=96.66  E-value=0.0076  Score=44.83  Aligned_cols=83  Identities=34%  Similarity=0.865  Sum_probs=48.4

Q ss_pred             CCceeCCCCCccCCCCCCC---------CCCCCCCCCC--CceeCC-CCceecCCCCcCCCCCCC----------CCC-C
Q psy6687          31 PGVCSCPPGFQGLHCEGGP---------GPGCDQKCSN--GGWCDS-QQMCQCPKGYQGTYCGTA----------MCF-P   87 (116)
Q Consensus        31 ~~~C~c~~g~~g~~c~~~~---------~~~~~~~c~~--~g~c~~-~~~c~C~~g~~g~~c~~~----------~c~-~   87 (116)
                      +++|.|.+...|..|+.-.         ..|.+-.|..  ...|.. +++|.|.|||.|..|+.-          .|. -
T Consensus      1036 tGQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~~pqCN~ftGQCqCkpGfGGR~C~qCqel~WGdP~~~C~aC 1115 (1758)
T KOG0994|consen 1036 TGQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIGGPQCNEFTGQCQCKPGFGGRTCSQCQELYWGDPNEKCRAC 1115 (1758)
T ss_pred             cCcCCCCcccccccccccccchhccccCCCCCccCCCccCCccccccccceeccCCCCCcchhHHHHhhcCCCCCCceec
Confidence            6788898888888876211         0111111222  123433 368999999999887631          111 1


Q ss_pred             CCCCCc----Eec-CCCceeCCCCCcCCCCC
Q psy6687          88 QCLNNG----TCT-APGVCSCPPGFQGLHCE  113 (116)
Q Consensus        88 ~c~~~g----~c~-~~~~C~C~~g~~g~~C~  113 (116)
                      .|...|    .|. .+++|.|.+|..|++|.
T Consensus      1116 dCd~rG~~tpQCdr~tG~C~C~~Gv~G~rCd 1146 (1758)
T KOG0994|consen 1116 DCDPRGIETPQCDRATGRCVCRPGVGGPRCD 1146 (1758)
T ss_pred             CCCCCCCCCCCccccCCceeecCCCCCcchh
Confidence            122222    232 24799999999999885

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.36  E-value=0.0076  Score=25.67  Aligned_cols=14  Identities=57%  Similarity=1.502  Sum_probs=7.0

Q ss_pred             CceeCCCCCcCCCC
Q psy6687          99 GVCSCPPGFQGLHC  112 (116)
Q Consensus        99 ~~C~C~~g~~g~~C  112 (116)
                      +.|.|+++|.|..|
T Consensus        24 ~~C~C~~g~~g~~C   37 (38)
T cd00054          24 YRCSCPPGYTGRNC   37 (38)
T ss_pred             eEeECCCCCcCCcC
Confidence            34555555555444

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.33  E-value=0.0064  Score=25.91  Aligned_cols=27  Identities=44%  Similarity=1.131  Sum_probs=20.3

Q ss_pred             CCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        55 ~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      .+|.+++.|.+.   +.|.|+++|.|..|+
T Consensus         9 ~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           9 NPCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             CCcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            467777778653   679999999987663

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=96.28  E-value=0.0011  Score=32.50  Aligned_cols=46  Identities=22%  Similarity=0.367  Sum_probs=18.8

Q ss_pred             CceeCCCCCccCCCCCCCCCCCCC-CCCCCceeCCCCceecCCCCcCCCC
Q psy6687          32 GVCSCPPGFQGLHCEGGPGPGCDQ-KCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus        32 ~~C~c~~g~~g~~c~~~~~~~~~~-~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      ++..|.+.|.|+.|+..   |.+. .-..+-.|...+.-+|.+||.|+.|
T Consensus        17 ~rv~C~~nyyG~~C~~~---C~~~~d~~ghy~Cd~~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   17 IRVVCDENYYGPNCSKF---CKPRDDSFGHYTCDSNGNKVCLPGWTGPNC   63 (63)
T ss_dssp             ------TTEETTTT-EE------EEETTEEEEE-SS--EEE-TTEESTTS
T ss_pred             EEEECCCCCCCccccCC---cCCCcCCcCCcccCCCCCCCCCCCCcCCCC
Confidence            45667777888777621   1111 0122335655566778888887765

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>KOG4260|consensus

Probab=96.06  E-value=0.011  Score=37.16  Aligned_cols=46  Identities=33%  Similarity=0.821  Sum_probs=31.2

Q ss_pred             ceecCCCCcCCCCCCC--CCCCCCCCCcEecC------CCceeCCCCCcCCCCC
Q psy6687          68 MCQCPKGYQGTYCGTA--MCFPQCLNNGTCTA------PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        68 ~c~C~~g~~g~~c~~~--~c~~~c~~~g~c~~------~~~C~C~~g~~g~~C~  113 (116)
                      .--|+++..|+.|..-  ....+|..+|.|..      ++.|.|.+||+|+.|.
T Consensus       129 kvCCp~gtyGpdCl~Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~  182 (350)
T KOG4260|consen  129 KVCCPDGTYGPDCLQCPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCR  182 (350)
T ss_pred             eeccCCCCcCCccccCCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCcccc
Confidence            3347788888887631  11245777777763      4789999999998874

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.04  E-value=0.012  Score=24.61  Aligned_cols=14  Identities=50%  Similarity=1.350  Sum_probs=8.7

Q ss_pred             CceeCCCCCcCC-CC
Q psy6687          99 GVCSCPPGFQGL-HC  112 (116)
Q Consensus        99 ~~C~C~~g~~g~-~C  112 (116)
                      +.|.|+.||.|. .|
T Consensus        21 ~~C~C~~g~~g~~~C   35 (36)
T cd00053          21 YRCVCPPGYTGDRSC   35 (36)
T ss_pred             eEeECCCCCcccCCc
Confidence            566666666665 44

>KOG1214|consensus

Probab=95.72  E-value=0.012  Score=42.53  Aligned_cols=47  Identities=30%  Similarity=0.782  Sum_probs=38.7

Q ss_pred             CCceeCCCCCcc--CCCCCCCCCCCCCCCCCCceeCCC---CceecCCCCcCC
Q psy6687          31 PGVCSCPPGFQG--LHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGT   78 (116)
Q Consensus        31 ~~~C~c~~g~~g--~~c~~~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~   78 (116)
                      +|.|.|-+||.|  ..|. +.++|....|.....|.++   +.|.|.+||.|+
T Consensus       808 ~y~C~CLPGfsGDG~~c~-dvDeC~psrChp~A~CyntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  808 TYSCACLPGFSGDGHQCT-DVDECSPSRCHPAATCYNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             eEEEeecCCccCCccccc-cccccCccccCCCceEecCCCcceeecccCccCC
Confidence            589999999985  5665 4588888889999999864   789999999865

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.62  E-value=0.021  Score=24.04  Aligned_cols=14  Identities=57%  Similarity=1.538  Sum_probs=9.1

Q ss_pred             CceeCCCCCcC-CCC
Q psy6687          99 GVCSCPPGFQG-LHC  112 (116)
Q Consensus        99 ~~C~C~~g~~g-~~C  112 (116)
                      +.|.|++||.| ..|
T Consensus        20 ~~C~C~~g~~g~~~C   34 (35)
T smart00181       20 YTCSCPPGYTGDKRC   34 (35)
T ss_pred             eEeECCCCCccCCcc
Confidence            56777777766 554

>KOG1836|consensus

Probab=94.51  E-value=0.12  Score=40.63  Aligned_cols=81  Identities=36%  Similarity=0.991  Sum_probs=48.3

Q ss_pred             ccCCCCCcCCCCCCC-------------CC--C-CCCCCC-cEecC-CCceeCCCCCccCCCC------------CCCCC
Q psy6687           2 CQCPKGYQGTYCGTA-------------MC--F-PQCLNN-GTCTA-PGVCSCPPGFQGLHCE------------GGPGP   51 (116)
Q Consensus         2 C~C~~g~~g~~c~~~-------------~c--~-~~c~~~-g~C~~-~~~C~c~~g~~g~~c~------------~~~~~   51 (116)
                      |.|+.+|+|..|+.-             .+  . -.|.++ .+|.. ++.|.|...-.|..|+            .....
T Consensus       697 c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C~C~~~t~G~~C~~C~~GfYg~~~~~~~~d  776 (1705)
T KOG1836|consen  697 CTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQCKCKHNTFGGQCAQCVDGFYGLPDLGTSGD  776 (1705)
T ss_pred             ccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCceecccCCCCCchhhhcCCCCCccccCCCCC
Confidence            789999999988630             01  0 023333 34542 5666666555555553            12222


Q ss_pred             CCCCCCCCCceeCC-----CCcee-cCCCCcCCCCCC
Q psy6687          52 GCDQKCSNGGWCDS-----QQMCQ-CPKGYQGTYCGT   82 (116)
Q Consensus        52 ~~~~~c~~~g~c~~-----~~~c~-C~~g~~g~~c~~   82 (116)
                      |..-+|.+.+.|..     ...|. |+++|+|.+|+.
T Consensus       777 C~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~  813 (1705)
T KOG1836|consen  777 CQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEE  813 (1705)
T ss_pred             CccCCCCCChhhcCcCcccceecCCCCCCCccccccc
Confidence            55556766666543     25787 999999999874

>PHA02887 EGF-like protein; Provisional

Probab=94.45  E-value=0.05  Score=29.80  Aligned_cols=27  Identities=33%  Similarity=1.019  Sum_probs=19.4

Q ss_pred             CCCCCcEec-----CCCceeCCCCCcCCCCCCC
Q psy6687          88 QCLNNGTCT-----APGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        88 ~c~~~g~c~-----~~~~C~C~~g~~g~~C~~~  115 (116)
                      .|. +|+|.     ....|.|++||+|.+|+..
T Consensus        93 YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE~v  124 (126)
T PHA02887         93 FCI-NGECMNIIDLDEKFCICNKGYTGIRCDEV  124 (126)
T ss_pred             Eee-CCEEEccccCCCceeECCCCcccCCCCcc
Confidence            355 35675     2368999999999999753

>KOG1836|consensus

Probab=94.42  E-value=0.13  Score=40.49  Aligned_cols=82  Identities=35%  Similarity=0.857  Sum_probs=44.7

Q ss_pred             ceeCCCCCccCCCCCCC-----------CCCCCCCCCCC---ceeCC-CCceecCCCCcCCCCCC--------------C
Q psy6687          33 VCSCPPGFQGLHCEGGP-----------GPGCDQKCSNG---GWCDS-QQMCQCPKGYQGTYCGT--------------A   83 (116)
Q Consensus        33 ~C~c~~g~~g~~c~~~~-----------~~~~~~~c~~~---g~c~~-~~~c~C~~g~~g~~c~~--------------~   83 (116)
                      .|.|+++|+|..|+.-.           ..+...+|.-+   .+|.. ++.|.|.+.-.|..|.+              .
T Consensus       696 ~c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C~C~~~t~G~~C~~C~~GfYg~~~~~~~~  775 (1705)
T KOG1836|consen  696 QCTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQCKCKHNTFGGQCAQCVDGFYGLPDLGTSG  775 (1705)
T ss_pred             hccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCceecccCCCCCchhhhcCCCCCccccCCCC
Confidence            48999999999997310           00111123222   23432 24566555544544432              1


Q ss_pred             CCC-CCCCCCcEec-----CCCcee-CCCCCcCCCCCC
Q psy6687          84 MCF-PQCLNNGTCT-----APGVCS-CPPGFQGLHCEG  114 (116)
Q Consensus        84 ~c~-~~c~~~g~c~-----~~~~C~-C~~g~~g~~C~~  114 (116)
                      +|. -+|.+++.|.     ....|. |+++|+|.+|+.
T Consensus       776 dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~  813 (1705)
T KOG1836|consen  776 DCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEE  813 (1705)
T ss_pred             CCccCCCCCChhhcCcCcccceecCCCCCCCccccccc
Confidence            132 2344444443     235787 999999999974

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=94.24  E-value=0.021  Score=25.42  Aligned_cols=21  Identities=52%  Similarity=1.333  Sum_probs=15.0

Q ss_pred             CCCCCcEecC---CCceeCCCCCc
Q psy6687          88 QCLNNGTCTA---PGVCSCPPGFQ  108 (116)
Q Consensus        88 ~c~~~g~c~~---~~~C~C~~g~~  108 (116)
                      .|..++.|++   +|+|.|++||.
T Consensus        11 ~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen   11 NCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSSTTSEEEEETTEEEEEESTTEE
T ss_pred             cCCCCCEEEcCCCCEEeeCCCCcE
Confidence            4666677764   37888888886

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=93.97  E-value=0.059  Score=21.02  Aligned_cols=10  Identities=70%  Similarity=1.690  Sum_probs=5.3

Q ss_pred             CceeCCCCCc
Q psy6687          32 GVCSCPPGFQ   41 (116)
Q Consensus        32 ~~C~c~~g~~   41 (116)
                      |.|.|++||.
T Consensus         2 y~C~C~~Gy~   11 (24)
T PF12662_consen    2 YTCSCPPGYQ   11 (24)
T ss_pred             EEeeCCCCCc
Confidence            4555555553

>KOG0994|consensus

Probab=93.67  E-value=0.3  Score=37.09  Aligned_cols=56  Identities=32%  Similarity=0.748  Sum_probs=35.6

Q ss_pred             cEecC-CCceeCCCCCccCCCCC----CC----CCCCCCCCCCCce----eCC-CCceecCCCCcCCCCC
Q psy6687          26 GTCTA-PGVCSCPPGFQGLHCEG----GP----GPGCDQKCSNGGW----CDS-QQMCQCPKGYQGTYCG   81 (116)
Q Consensus        26 g~C~~-~~~C~c~~g~~g~~c~~----~~----~~~~~~~c~~~g~----c~~-~~~c~C~~g~~g~~c~   81 (116)
                      ..|.. +++|.|.+||-|..|+.    .+    ..|-.-.|...|+    |.. +++|+|.+|..|..|+
T Consensus      1077 pqCN~ftGQCqCkpGfGGR~C~qCqel~WGdP~~~C~aCdCd~rG~~tpQCdr~tG~C~C~~Gv~G~rCd 1146 (1758)
T KOG0994|consen 1077 PQCNEFTGQCQCKPGFGGRTCSQCQELYWGDPNEKCRACDCDPRGIETPQCDRATGRCVCRPGVGGPRCD 1146 (1758)
T ss_pred             ccccccccceeccCCCCCcchhHHHHhhcCCCCCCceecCCCCCCCCCCCccccCCceeecCCCCCcchh
Confidence            34544 67999999999998862    11    1122223444432    322 3789999999998887

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=93.27  E-value=0.14  Score=23.71  Aligned_cols=15  Identities=40%  Similarity=1.170  Sum_probs=8.0

Q ss_pred             CceeCCCCCcCCCCC
Q psy6687          99 GVCSCPPGFQGLHCE  113 (116)
Q Consensus        99 ~~C~C~~g~~g~~C~  113 (116)
                      ++|.|.++++|.+|+
T Consensus        19 G~C~C~~~~~G~~C~   33 (50)
T cd00055          19 GQCECKPNTTGRRCD   33 (50)
T ss_pred             CEEeCCCcCCCCCCC
Confidence            455555555555554

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=92.95  E-value=0.11  Score=29.01  Aligned_cols=17  Identities=29%  Similarity=0.968  Sum_probs=14.6

Q ss_pred             CCceeCCCCCcCCCCCC
Q psy6687          98 PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        98 ~~~C~C~~g~~g~~C~~  114 (116)
                      ...|.|..||+|.+||.
T Consensus        66 ~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         66 GMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             CceeECCCCcccccccc
Confidence            46899999999999974

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=92.32  E-value=0.034  Score=23.97  Aligned_cols=23  Identities=43%  Similarity=1.044  Sum_probs=13.0

Q ss_pred             CCCCCcEecC---CCceeCCCCCcCC
Q psy6687          88 QCLNNGTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        88 ~c~~~g~c~~---~~~C~C~~g~~g~  110 (116)
                      .|+.+++|.+   ++.|.|++||.|.
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred             CCCCCcEeecCCCCEEeECCCCCccC
Confidence            3555566653   3677788777664

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=91.10  E-value=0.24  Score=22.48  Aligned_cols=15  Identities=40%  Similarity=1.221  Sum_probs=7.0

Q ss_pred             CceeCCCCCcCCCCC
Q psy6687          99 GVCSCPPGFQGLHCE  113 (116)
Q Consensus        99 ~~C~C~~g~~g~~C~  113 (116)
                      ++|.|+++++|++|+
T Consensus        18 G~C~C~~~~~G~~C~   32 (46)
T smart00180       18 GQCECKPNVTGRRCD   32 (46)
T ss_pred             CEEECCCCCCCCCCC
Confidence            344444444444443

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=88.73  E-value=1.4  Score=20.39  Aligned_cols=20  Identities=45%  Similarity=1.374  Sum_probs=11.9

Q ss_pred             CCCCCcEecCCCceeCCCCCc
Q psy6687          88 QCLNNGTCTAPGVCSCPPGFQ  108 (116)
Q Consensus        88 ~c~~~g~c~~~~~C~C~~g~~  108 (116)
                      .|..+..|.+ +.|.|++||+
T Consensus        27 qC~~~s~C~~-g~C~C~~g~~   46 (52)
T PF01683_consen   27 QCIGGSVCVN-GRCQCPPGYV   46 (52)
T ss_pred             CCCCcCEEcC-CEeECCCCCE
Confidence            4445566653 6777777664

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>KOG3607|consensus

Probab=88.57  E-value=0.47  Score=34.39  Aligned_cols=28  Identities=29%  Similarity=0.719  Sum_probs=25.0

Q ss_pred             CCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|..+|+|.+..+|.|.+||.+++|+.
T Consensus       630 ~~C~g~GVCnn~~~ChC~~gwapp~C~~  657 (716)
T KOG3607|consen  630 TTCNGHGVCNNELNCHCEPGWAPPFCFI  657 (716)
T ss_pred             cccCCCcccCCCcceeeCCCCCCCcccc
Confidence            4588899999889999999999999974

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=88.00  E-value=0.18  Score=23.07  Aligned_cols=16  Identities=44%  Similarity=1.200  Sum_probs=10.4

Q ss_pred             CCceeCCCCCcCCCCC
Q psy6687          98 PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        98 ~~~C~C~~g~~g~~C~  113 (116)
                      +++|.|.++|+|++|+
T Consensus        17 ~G~C~C~~~~~G~~C~   32 (49)
T PF00053_consen   17 TGQCVCKPGTTGPRCD   32 (49)
T ss_dssp             CEEESBSTTEESTTS-
T ss_pred             CCEEeccccccCCcCc
Confidence            3567777777777765

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=87.92  E-value=0.75  Score=19.47  Aligned_cols=10  Identities=50%  Similarity=1.404  Sum_probs=7.7

Q ss_pred             CceeCCCCCc
Q psy6687          99 GVCSCPPGFQ  108 (116)
Q Consensus        99 ~~C~C~~g~~  108 (116)
                      ++|.|++||.
T Consensus        18 ~~C~CPeGyI   27 (34)
T PF09064_consen   18 GQCFCPEGYI   27 (34)
T ss_pred             CceeCCCceE
Confidence            5788888875

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>KOG3607|consensus

Probab=83.36  E-value=1.3  Score=32.26  Aligned_cols=30  Identities=23%  Similarity=0.754  Sum_probs=25.7

Q ss_pred             CCCCCCCceeCCCCceecCCCCcCCCCCCC
Q psy6687          54 DQKCSNGGWCDSQQMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        54 ~~~c~~~g~c~~~~~c~C~~g~~g~~c~~~   83 (116)
                      ...|+.+|+|.+...|.|.++|.++.|+..
T Consensus       629 ~~~C~g~GVCnn~~~ChC~~gwapp~C~~~  658 (716)
T KOG3607|consen  629 PTTCNGHGVCNNELNCHCEPGWAPPFCFIF  658 (716)
T ss_pred             ccccCCCcccCCCcceeeCCCCCCCccccc
Confidence            345888999998889999999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
2ygq_A	324	Wif Domain-Epidermal Growth Factor (Egf)-Like Domai		1e-18
2vj2_A	169	Human Jagged-1, Domains Dsl And Egfs1-3 Length = 16		2e-07
2gy5_A	423	Tie2 Ligand-Binding Domain Crystal Structure Length		9e-05

>pdb|2YGQ|A Chain A, Wif Domain-Epidermal Growth Factor (Egf)-Like Domains 1-3 Of Human Wnt Inhibitory Factor 1 In Complex With 1,2-Dipalmitoylphosphatidylcholine Length = 324

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 70/141 (49%), Gaps = 29/141 (20%)
Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
           +C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+              
Sbjct: 166 ICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC 225
Query: 49  --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
             PG     PG          C Q C NGG C  +  C+C KGYQG  C   +C P C  
Sbjct: 226 FYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGA 285
Query: 92  NGTCTAPGVCSCPPGFQGLHC 112
           +GTC  P  C C  G+ G HC
Sbjct: 286 HGTCHEPNKCQCQEGWHGRHC 306

>pdb|2VJ2|A Chain A, Human Jagged-1, Domains Dsl And Egfs1-3 Length = 169

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 4   CPKGYQGTYCGTAMCFPQCL-NNGTCTAPGVCSCPPGFQGLHCEG-GPGPGCDQKCSNGG 61
           C +G+ G  C  A+C   C   +G+C  PG C C  G+QGL+C+   P PGC       G
Sbjct: 54  CMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVH-----G 108
Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG----VCSCPPGFQGLHCE 113
            C+    C C   + G  C   + +      CLN GTC+  G     CSCP G+ G +CE
Sbjct: 109 ICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168

>pdb|2GY5|A Chain A, Tie2 Ligand-Binding Domain Crystal Structure Length = 423

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 22  CLNNGTCTAP-GVCSCPPGFQGLHCEGG-----PGPGCDQKCSNGGWCDSQQMC------ 69
           C+NNG C    G C CPPGF G  CE        G  C ++CS    C S   C      
Sbjct: 205 CMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYG 264
Query: 70  -QCPKGYQGTYCGTAMCFP-----------QCLNNGTCTAPGVCSCPPGFQGLHCE 113
             C  G++G  C  A C P            C N   C     C C PG+QGL CE
Sbjct: 265 CSCATGWKGLQCNEA-CHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCE 319

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	9e-24
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-22
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-14
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-12
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-07
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	1e-12
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	2e-12
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	4e-12
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-11
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-07
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	6e-05
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	8e-11
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	3e-08
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	7e-08
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	9e-10
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	4e-07
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	7e-09
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	4e-08
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	6e-07
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-08
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-07
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	5e-08
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	8e-05
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	2e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	5e-05
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	3e-06
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	7e-06
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-05
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-04
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	3e-05
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	2e-04

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 91.8 bits (228), Expect = 9e-24
 Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
           C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+      C   C NGG
Sbjct: 167 CECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDK---ANCSTTCFNGG 223

Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
            C     C CP G +G  C  + C   C N G C     C C  G+QG  C 
Sbjct: 224 TCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCS 275

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 88.4 bits (219), Expect = 2e-22
 Identities = 51/112 (45%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
           C CP G+ G  C  A C   C N GTC  PG C CPPG +G  CE      C Q C NGG
Sbjct: 199 CICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEI---SKCPQPCRNGG 255

Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
            C  +  C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G HC 
Sbjct: 256 KCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCN 307

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 66.0 bits (161), Expect = 3e-14
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C     G      +      + G      + +         C+      C   C NGG
Sbjct: 107 FPCLGKQDGVAA-FEVDVIVMNSEGNTI---LKTPQNAIFFKTCQQ---AECPGGCRNGG 159

Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
           +C+ +++C+CP G+ G +C  A+C P+C+N G C  PG C CPPGF G++C+
Sbjct: 160 FCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCD 211

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 61.4 bits (149), Expect = 1e-12
 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
           C CP G +G  C  + C   C N G C     C C  G+QG  C     P C+  C   G
Sbjct: 231 CICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSK---PVCEPGCGAHG 287

Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCFPQC 89
            C     CQC +G+ G +C         
Sbjct: 288 TCHEPNKCQCQEGWHGRHCNKRYEASLI 315

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 21/60 (35%), Positives = 26/60 (43%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
           C+C KGYQG  C   +C P C  +GTC  P  C C  G+ G HC             +  
Sbjct: 263 CKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIGTKHHHH 322

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 60.1 bits (146), Expect = 1e-12
 Identities = 27/113 (23%), Positives = 36/113 (31%), Gaps = 4/113 (3%)

Query: 2   CQCPKGYQGTYCGTA-MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             C   Y G  C            +  C   G  +C  G+ G  C               
Sbjct: 19  VTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNR--AICRQGCSPKH 76

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
           G C     C+C  G+QG YC   +  P    +G C  P  C C   + G  C+
Sbjct: 77  GSCKLPGDCRCQYGWQGLYCDKCIPHP-GCVHGICNEPWQCLCETNWGGQLCD 128

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 59.3 bits (144), Expect = 2e-12
 Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 2   CQCPKGYQGTYCGTAMCFPQ-CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
             C +G+ G  C  A+C       +G+C  PG C C  G+QGL+C+              
Sbjct: 52  KTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD----KCIPHPGCVH 107

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPGV----CSCPPGFQGLHC 112
           G C+    C C   + G  C   +        CLN GTC+  G     CSCP G+ G +C
Sbjct: 108 GICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNC 167

Query: 113 E 113
           E
Sbjct: 168 E 168

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 58.1 bits (141), Expect = 4e-12
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 18  CFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQG 77
                 ++G+       +C   + G  C     P  D        CD      C +G+ G
Sbjct: 3   GSHHHHHHGSIEGRSAVTCDDYYYGFGCNKFCRPRDD--FFGHYACDQNGNKTCMEGWMG 60

Query: 78  TYCGTAMCFPQ-CLNNGTCTAPGVCSCPPGFQGLHCE 113
             C  A+C       +G+C  PG C C  G+QGL+C+
Sbjct: 61  PECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD 97

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 28/126 (22%), Positives = 39/126 (30%), Gaps = 15/126 (11%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCT-------APGVCSCPPGFQGLHCEGGPGPGCD 54
           C+C  G++G+ C        CLN               VC C  G+Q   C+    PGC 
Sbjct: 540 CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQ--ECPGCP 597

Query: 55  QKCSNGGWCDSQQMCQCPKGYQGTYCGTA----MCFPQCLNNGTCTAPGVCSCPPGFQGL 110
             C     C   +  +  KG  G  C  A          +   TC       C   +   
Sbjct: 598 SPCGKYISC--AECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLE 655

Query: 111 HCEGGT 116
             +G  
Sbjct: 656 QQDGMD 661

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 23/111 (20%), Positives = 29/111 (26%), Gaps = 6/111 (5%)

Query: 2   CQCPKGYQGTYCGTAMCFPQ-CLNNGTCTAPGVCSCPPGFQGLHCEGG-PGPGCDQKCSN 59
           C+C  GYQ   C      P  C    +C          G  G +C    PG         
Sbjct: 579 CECHSGYQLPLCQECPGCPSPCGKYISCA--ECLKFEKGPFGKNCSAACPGLQLSNNPVK 636

Query: 60  GGWCDSQQMCQCPKGYQGTYCGTAMCFP-QCLNNGTC-TAPGVCSCPPGFQ 108
           G  C  +    C   Y          +      +  C   P  C     FQ
Sbjct: 637 GRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPDGCGENLYFQ 687

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 39.7 bits (92), Expect = 6e-05
 Identities = 30/120 (25%), Positives = 38/120 (31%), Gaps = 21/120 (17%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +C+C  GY G  C       +C   G  +     SC      + C G     C       
Sbjct: 447 ICRCDTGYIGKNC-------ECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC------- 492

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAP-------GVCSCPPGFQGLHCE 113
           G C         K   G YC       +  N   C  P       G C C PGF+G  C+
Sbjct: 493 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ 552

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 56.5 bits (136), Expect = 8e-11
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 6/85 (7%)

Query: 29  TAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQ 88
             P  C                  C + C NG +C     C C  G++G +C TA C P 
Sbjct: 376 LMPEECRATVQP-----AQTLTSECSRLCRNG-YCTPTGKCCCSPGWEGDFCRTAKCEPA 429

Query: 89  CLNNGTCTAPGVCSCPPGFQGLHCE 113
           C + G C  P  C C  G+ G  CE
Sbjct: 430 CRHGGVCVRPNKCLCKKGYLGPQCE 454

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
           C C  G++G +C TA C P C + G C  P  C C  G+ G  CE
Sbjct: 410 CCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCE 454

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 48.0 bits (114), Expect = 7e-08
 Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 4   CPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC 63
           C    Q     T+ C   C  NG CT  G C C PG++G  C       C+  C +GG C
Sbjct: 381 CRATVQPAQTLTSECSRLC-RNGYCTPTGKCCCSPGWEGDFCRTAK---CEPACRHGGVC 436

Query: 64  DSQQMCQCPKGYQGTYC 80
                C C KGY G  C
Sbjct: 437 VRPNKCLCKKGYLGPQC 453

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 51.4 bits (124), Expect = 9e-10
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 12/104 (11%)

Query: 22  CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGY 75
           C + G C        C C  G+ G  CE          C N   C  Q     C C  GY
Sbjct: 15  CEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGY 74

Query: 76  QGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCE 113
           +G +C      C    CL+NG C        C CP GF G  C+
Sbjct: 75  EGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 118

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 2   CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
           CQC +GY G  C   +  C    C N+ TC        C C PG++G+HCE         
Sbjct: 30  CQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASS 89

Query: 56  KCSNGGWCDSQQ---MCQCPKGYQGTYC 80
            C + G C  +     C+CP G+ G  C
Sbjct: 90  PCLHNGRCLDKINEFQCECPTGFTGHLC 117

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 51.2 bits (122), Expect = 7e-09
 Identities = 25/131 (19%), Positives = 32/131 (24%), Gaps = 22/131 (16%)

Query: 2   CQCPKGYQGTYCGTA----------MCFPQCLNNGTCTAPGVCSCPPGFQGLHCE----- 46
           C C     G   G                 C  +G C+  G C C   + G +C      
Sbjct: 506 CVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCS-CGDCLCDSDWTGYYCNCTTRT 564

Query: 47  GGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGT-AMCFPQCLNNGTCTAPGVCSCPP 105
                     CS  G C+         G  G  C     C   C     C       C  
Sbjct: 565 DTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKEC-----VECKK 619

Query: 106 GFQGLHCEGGT 116
             +G   +  T
Sbjct: 620 FDRGALHDENT 630

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 48.9 bits (116), Expect = 4e-08
 Identities = 24/119 (20%), Positives = 32/119 (26%), Gaps = 18/119 (15%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCL--------NNGTCTAPGVCSCPPGFQGLHCEGGPGPGC 53
           C C   + G YC        C+          G C         PG  G  CE    P C
Sbjct: 547 CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCE--KCPTC 604

Query: 54  DQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
              C+    C      +C K  +G       C   C +              G   ++C
Sbjct: 605 PDACTFKKEC-----VECKKFDRGALHDENTCNRYCRDEIES---VKELKDTGKDAVNC 655

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 45.5 bits (107), Expect = 6e-07
 Identities = 27/125 (21%), Positives = 35/125 (28%), Gaps = 22/125 (17%)

Query: 10  GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE-----GGPGPGCDQKCSNGGWCD 64
                      +C N       GVC C PG+ G  CE       P    +     G    
Sbjct: 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVC 495

Query: 65  SQQ------MCQCPKGYQGTYCGTA----------MCFPQCLNNGTCTAPGVCSCPPGFQ 108
           SQ+       C C     G   G                 C  +G C+  G C C   + 
Sbjct: 496 SQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCS-CGDCLCDSDWT 554

Query: 109 GLHCE 113
           G +C 
Sbjct: 555 GYYCN 559

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* Length = 188

 Score = 48.8 bits (115), Expect = 2e-08
 Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 7/88 (7%)

Query: 2   CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
             C     G                T               +  +      C   C NGG
Sbjct: 107 FPCLGXQDGVAAFEVDVIVMNSEGNTI-------LXTPQNAIFFKTCQQAECPGGCRNGG 159

Query: 62  WCDSQQMCQCPKGYQGTYCGTAMCFPQC 89
           +C+ +++C+CP G+ G +C         
Sbjct: 160 FCNERRICECPDGFHGPHCEGTKHHHHH 187

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* Length = 188

 Score = 46.4 bits (109), Expect = 1e-07
 Identities = 23/114 (20%), Positives = 26/114 (22%), Gaps = 21/114 (18%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
           +     G              CL      A                           S G
Sbjct: 88  VNVPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM-----------------NSEG 130

Query: 61  GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 114
                  +           C  A C   C N G C    +C CP GF G HCEG
Sbjct: 131 NTI----LXTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG 180

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 47.0 bits (112), Expect = 5e-08
 Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 33/125 (26%)

Query: 22  CLNNGTCTAPGV-----CSCPPGFQGLHCEGGPGPGCDQK------------CSNGGWCD 64
           C N G C          C CP GF   +C        D++            C NGG C+
Sbjct: 8   CENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCE 67

Query: 65  SQQM----------CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQ 108
             +           C+CP+G+ G +C   +  C  + C N G CT       C CP  F 
Sbjct: 68  ISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM 127

Query: 109 GLHCE 113
           G +C+
Sbjct: 128 GRNCQ 132

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 28/119 (23%)

Query: 2   CQCPKGYQGTYCGTAMCFPQ---------------CLNNGTCTAPG----------VCSC 36
           C+CP G+    C + +                   C N GTC              VC C
Sbjct: 25  CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKC 84

Query: 37  PPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQCLNN 92
           P GF G+HC+        + C NGG C        C+CP  + G  C          ++
Sbjct: 85  PRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGHHHHHH 143

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 13/93 (13%)

Query: 22  CLNNGTCTAPG---VCSCPPGFQGLHCE-------GGPGPGCDQKCSNGGWCDSQQMCQC 71
           CL+NG+C        C+C PG++G +CE            GC   C  G        C C
Sbjct: 13  CLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPG---QESYTCSC 69

Query: 72  PKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCP 104
            +GY+                G  T+       
Sbjct: 70  AQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDL 102

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 20/109 (18%), Positives = 25/109 (22%), Gaps = 3/109 (2%)

Query: 8   YQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ- 66
                 G   C           +   C C     G  C         +  S G +     
Sbjct: 289 SDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK 348

Query: 67  -QMCQCPKGYQGTYCGTAMC-FPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
                C                  C N GTC     C CP  + G+ CE
Sbjct: 349 GAANACIPSISSIGTNVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCE 397

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 40.2 bits (93), Expect = 5e-05
 Identities = 26/117 (22%), Positives = 37/117 (31%), Gaps = 12/117 (10%)

Query: 2   CQCPKGYQGTYCGT--AMCFPQCLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCDQK 56
           C+C     G  CG        +  + G+          +C P    +             
Sbjct: 315 CECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLH-- 372

Query: 57  CSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTC-TAPGVCSCPPGFQGLHC 112
           C NGG C +   C CP  Y G  C       +C   G+C +  G  + P G    H 
Sbjct: 373 CQNGGTCHNNVRCLCPAAYTGILCEK----LRCEEAGSCGSDSGQGAPPHGTHHHHH 425

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 9/89 (10%)

Query: 34  CSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM---CQCPKGYQGTYCGTAM--CFPQ 88
            +     +               C NGG C        C C  G++G  C          
Sbjct: 33  ENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKN 92

Query: 89  CLNNGTCTAPGV----CSCPPGFQGLHCE 113
                 C         CSC  G++    +
Sbjct: 93  GRCKQFCKTGADSKVLCSCTTGYRLAPDQ 121

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 41.6 bits (98), Expect = 7e-06
 Identities = 20/113 (17%), Positives = 28/113 (24%), Gaps = 12/113 (10%)

Query: 2   CQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
               K  +               CLN G C        C C  GF+G +CE         
Sbjct: 33  ENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKN 92

Query: 56  KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGVCS 102
                          +C C  GY+      +     P  C       +P   +
Sbjct: 93  GRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSVSHSPTTLT 145

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 16/105 (15%), Positives = 24/105 (22%), Gaps = 13/105 (12%)

Query: 22  CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGY 75
           C+                    +  +            C N G C        C C +G+
Sbjct: 12  CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGF 71

Query: 76  QGTYCGTAM----CFPQCLNNGTCTAPG---VCSCPPGFQGLHCE 113
           +G  C               +  C       VCSC  G+      
Sbjct: 72  EGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 24/107 (22%), Positives = 32/107 (29%), Gaps = 13/107 (12%)

Query: 2   CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
               K  +          C    C N G C        C+C  GF+G +CE      C  
Sbjct: 27  EDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSL 86

Query: 56  K-CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC 95
                  +C  +Q   +C C +GY     G A     P  C      
Sbjct: 87  DNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 42/136 (30%), Positives = 50/136 (36%), Gaps = 25/136 (18%)

Query: 1   MCQCPKGYQGTYCGTAMCFPQCLNNGTCT-APGVCSCPPGFQGLHCE-----GGPGPGCD 54
           + +C     G  C        C+NNG C    G C CPPGF G  CE        G  C 
Sbjct: 186 VRRCEAQKWGPECNH--LCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCK 243

Query: 55  QKCSNGGWCDSQQM-------CQCPKGYQGTYCGTA----------MCFPQCLNNGTCTA 97
           ++CS    C S          C C  G++G  C  A               C N   C  
Sbjct: 244 ERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR 303

Query: 98  PGVCSCPPGFQGLHCE 113
              C C PG+QGL CE
Sbjct: 304 FQGCLCSPGWQGLQCE 319

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A* Length = 725

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 2/81 (2%)

Query: 18  CFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGW-CDSQQMCQCPKGYQ 76
           C   C  +G C   G C C   + GL+C+        Q   N      +Q       G  
Sbjct: 537 CLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKL 595

Query: 77  GTYCGTAMCFPQCLNNGTCTA 97
            T CG          +G C+ 
Sbjct: 596 STVCGAVASGLALHFSGGCSR 616

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.89
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.87
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.8
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.77
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.74
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.73
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.7
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.69
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.68
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.65
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.53
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.52
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.49
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.49
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.46
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.44
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	99.41
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.33
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	99.25
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	99.21
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	99.2
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.18
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.17
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.14
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.08
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.05
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.92
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.7
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.68
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.67
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.57
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.56
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.51
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.49
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.48
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.45
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.44
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.43
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.4
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.4
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.36
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.35
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.35
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.33
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.31
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.31
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.3
2vh0_B	134	Activated factor XA light chain; serine protease,	98.3
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.29
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.25
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	98.25
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.24
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.23
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.22
2vh0_B	134	Activated factor XA light chain; serine protease,	98.21
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.19
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.11
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.06
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	98.05
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.01
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.01
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.95
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.92
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.92
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.89
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.81
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.79
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.76
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.74
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.66
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.66
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.63
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.56
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.55
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.47
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.37
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	97.37
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	97.37
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.16
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.08
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	97.05
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.01
3v65_B	386	Low-density lipoprotein receptor-related protein;	96.95
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.92
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.82
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	96.79
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.73
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.58
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	96.57
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.5
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.44
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.4
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	96.37
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.34
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.3
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	96.22
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	96.15
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	96.13
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	95.88
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	95.75
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.72
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.57
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	95.55
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.39
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.02
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	94.72
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	93.97
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	93.53
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.11
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	92.83
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.17
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	91.55
3g5c_A	510	ADAM 22; alpha/beta fold, cross-linked domain, cel	91.2
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	89.78
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	89.73
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	89.68
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	88.96
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	86.8
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	85.76
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	84.73
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	81.44
3g5c_A	510	ADAM 22; alpha/beta fold, cross-linked domain, cel	81.0
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	80.54

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.89  E-value=3.6e-23  Score=130.28  Aligned_cols=111  Identities=41%  Similarity=1.144  Sum_probs=59.3

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      .|.|.+||+|..|+...|..+|.++|.|...+.|.|.+||+|..|+...   +..+|.++|.|...+.|.|++||.|..|
T Consensus       166 ~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~---C~~~C~~~G~C~~~~~C~C~~G~~G~~C  242 (324)
T 2ygq_A          166 ICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKAN---CSTTCFNGGTCFYPGKCICPPGLEGEQC  242 (324)
T ss_dssp             CEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCC---CSSCCCSSCCBSCSSCBCCCTTCCTTTT
T ss_pred             eEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCc---CCCCCCCCCeeCCCCeeeCCCCccCCCC
Confidence            4778888888888877777778888888777788888888888887433   3456777777776677788888888777


Q ss_pred             CCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      +++.|..+|.++|+|...++|.|++||+|..|+.
T Consensus       243 ~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~  276 (324)
T 2ygq_A          243 EISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSK  276 (324)
T ss_dssp             C---------------------------------
T ss_pred             CcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcC
Confidence            7666666677777776656777777777777653

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.87  E-value=5e-23  Score=129.66  Aligned_cols=112  Identities=46%  Similarity=1.157  Sum_probs=42.6

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC   80 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c   80 (116)
                      .|.|.+||+|..|+...|..+|.++|+|...+.|.|++||+|..|+..  . +..+|.++|.|...+.|.|++||.|..|
T Consensus       198 ~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~--~-C~~~C~~~g~C~~~~~C~C~~G~~G~~C  274 (324)
T 2ygq_A          198 FCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEIS--K-CPQPCRNGGKCIGKSKCKCSKGYQGDLC  274 (324)
T ss_dssp             CEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC----------------------------------
T ss_pred             EEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcC--c-CCCcCCCCCEECCCCEEECCCCCcCCCC
Confidence            488999999999998889888999999988889999999999999743  3 3467888999987789999999999999


Q ss_pred             CCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCCC
Q psy6687          81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~~  115 (116)
                      +.+.|..+|.++|+|.+.++|.|++||+|.+|+..
T Consensus       275 ~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~  309 (324)
T 2ygq_A          275 SKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKR  309 (324)
T ss_dssp             -----------------------------------
T ss_pred             cCCCCCCCCCCCCEECCCCEeECCCCCcCCCCCCC
Confidence            98888888999999998899999999999999754

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.80  E-value=3.8e-20  Score=107.16  Aligned_cols=109  Identities=37%  Similarity=0.922  Sum_probs=87.0

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCC-CCcEecCCCceeCCCCCccCCCCCCCCCCCCCC-CCCCceeCCCCceecCCCCcCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCL-NNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQK-CSNGGWCDSQQMCQCPKGYQGT   78 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~-~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~-c~~~g~c~~~~~c~C~~g~~g~   78 (116)
                      .|.|.+||+|..|+...|...|. .+|.|++.+.|.|.+||+|..|+.    +...+ |. +|+|...++|.|++||.|.
T Consensus        51 ~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~~----C~~~~~C~-~g~C~~~~~C~C~~G~~G~  125 (169)
T 2vj2_A           51 NKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDK----CIPHPGCV-HGICNEPWQCLCETNWGGQ  125 (169)
T ss_dssp             CEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSCE----ECCCTTCS-SEECSSTTCCEECTTEETT
T ss_pred             eeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCccc----CCCCCCCC-CCCcCCCCEEeCCCCCCCC
Confidence            36889999999998777877776 668888778999999999998863    22233 65 3588876899999999999


Q ss_pred             CCC--CCCCC--CCCCCCcEecCC----CceeCCCCCcCCCCCC
Q psy6687          79 YCG--TAMCF--PQCLNNGTCTAP----GVCSCPPGFQGLHCEG  114 (116)
Q Consensus        79 ~c~--~~~c~--~~c~~~g~c~~~----~~C~C~~g~~g~~C~~  114 (116)
                      .|+  +++|.  .+|.++++|++.    ++|.|++||+|.+|++
T Consensus       126 ~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~  169 (169)
T 2vj2_A          126 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI  169 (169)
T ss_dssp             TTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred             cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence            998  34464  689999999753    7999999999999974

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.77  E-value=7.7e-19  Score=119.27  Aligned_cols=110  Identities=35%  Similarity=0.875  Sum_probs=93.0

Q ss_pred             ccCCCCCcCCCCCCC----------CCCC-----CCCCCcEecCCCceeCC----CCCccCCCCCCCCCCCC---CCCCC
Q psy6687           2 CQCPKGYQGTYCGTA----------MCFP-----QCLNNGTCTAPGVCSCP----PGFQGLHCEGGPGPGCD---QKCSN   59 (116)
Q Consensus         2 C~C~~g~~g~~c~~~----------~c~~-----~c~~~g~C~~~~~C~c~----~g~~g~~c~~~~~~~~~---~~c~~   59 (116)
                      |.|.+||+|..|+..          .|..     +|+++|+|.. +.|.|.    ++|+|..|+.+...|..   .+|.+
T Consensus       460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~  538 (690)
T 3fcs_B          460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSG  538 (690)
T ss_dssp             EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGG
T ss_pred             eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCC
Confidence            889999999999754          3653     3889999985 899999    99999999866666653   36888


Q ss_pred             CceeCCCCceecCCCCcCCCCC----CCCCC----CCCCCCcEecCCCceeC-CCCCcCCCCCC
Q psy6687          60 GGWCDSQQMCQCPKGYQGTYCG----TAMCF----PQCLNNGTCTAPGVCSC-PPGFQGLHCEG  114 (116)
Q Consensus        60 ~g~c~~~~~c~C~~g~~g~~c~----~~~c~----~~c~~~g~c~~~~~C~C-~~g~~g~~C~~  114 (116)
                      +|.|.. +.|.|.+||.|..|+    ...|.    .+|.++|+|.. ++|.| .+||+|.+|+.
T Consensus       539 ~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~-g~C~C~~~Gy~G~~Ce~  600 (690)
T 3fcs_B          539 HGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC-GSCVCIQPGSYGDTCEK  600 (690)
T ss_dssp             SEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET-TEEECCSTTCBSTTSCB
T ss_pred             CCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC-CEEECCCCCccCCCcCc
Confidence            999987 899999999999998    45676    46999999986 79999 99999999985

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.74  E-value=2.3e-18  Score=96.38  Aligned_cols=96  Identities=34%  Similarity=0.796  Sum_probs=81.3

Q ss_pred             CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCC--CCCCC-CCCC
Q psy6687          20 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG--TAMCF-PQCL   90 (116)
Q Consensus        20 ~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~--~~~c~-~~c~   90 (116)
                      .+|.++++|++   .|.|.|++||+|..|+.++++|...+|.+++.|++.   +.|.|++||.|..|+  +++|. .+|.
T Consensus        13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~   92 (135)
T 2vj3_A           13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCL   92 (135)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCST
T ss_pred             CCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcC
Confidence            35888899975   468999999999999877788888889999999753   689999999999997  45675 6899


Q ss_pred             CCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          91 NNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        91 ~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      ++++|++   .++|.|++||+|.+|+++
T Consensus        93 ~~g~C~~~~g~~~C~C~~G~~G~~C~~~  120 (135)
T 2vj3_A           93 HNGRCLDKINEFQCECPTGFTGHLCQVD  120 (135)
T ss_dssp             TTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CCCEeECCCCCeEEECCCCCcCCccCcc
Confidence            9999974   479999999999999754

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.73  E-value=2.1e-18  Score=99.81  Aligned_cols=109  Identities=31%  Similarity=0.808  Sum_probs=84.3

Q ss_pred             CccCCCCCcCCCCCCCCCCC--CCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCC-CCceeCCCCceecCCCCcC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFP--QCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCS-NGGWCDSQQMCQCPKGYQG   77 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~--~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~-~~g~c~~~~~c~C~~g~~g   77 (116)
                      .|.|.+||+|..|+. .|..  .+.++++|...+.|.|.+||+|..|+..+   +...|. .+|.|...+.|.|++||.|
T Consensus        18 ~c~C~~g~~G~~C~~-~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~---C~~~C~~~~g~C~~~~~C~C~~G~~G   93 (169)
T 2vj2_A           18 AVTCDDYYYGFGCNK-FCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAI---CRQGCSPKHGSCKLPGDCRCQYGWQG   93 (169)
T ss_dssp             ---CCTTEETTTTCE-ECCCEEETTEEEEECSSCCEEECTTEESTTSCEEC---CCTTCCTTTEECSSTTCCEECTTEES
T ss_pred             eeeCCCcCcCCCccc-ccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCCC---CCCCCCCCCcccCCCCeeECCCCCCC
Confidence            478999999999975 4554  47778899777899999999999998533   344565 6788887789999999999


Q ss_pred             CCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          78 TYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        78 ~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|+.-.....|.+ ++|+..++|.|++||+|..|++
T Consensus        94 ~~C~~C~~~~~C~~-g~C~~~~~C~C~~G~~G~~C~~  129 (169)
T 2vj2_A           94 LYCDKCIPHPGCVH-GICNEPWQCLCETNWGGQLCDK  129 (169)
T ss_dssp             SSSCEECCCTTCSS-EECSSTTCCEECTTEETTTTCE
T ss_pred             CCcccCCCCCCCCC-CCcCCCCEEeCCCCCCCCcccC
Confidence            99974222233765 4898779999999999999974

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.70  E-value=8e-17  Score=90.88  Aligned_cols=95  Identities=37%  Similarity=0.945  Sum_probs=77.5

Q ss_pred             CCCCCcEecC-----CCceeCCCCCccCCCCC------------CCCCCCCCCCCCCceeC-------C---CCceecCC
Q psy6687          21 QCLNNGTCTA-----PGVCSCPPGFQGLHCEG------------GPGPGCDQKCSNGGWCD-------S---QQMCQCPK   73 (116)
Q Consensus        21 ~c~~~g~C~~-----~~~C~c~~g~~g~~c~~------------~~~~~~~~~c~~~g~c~-------~---~~~c~C~~   73 (116)
                      +|.++++|++     .|.|.|++||+|..|+.            .+++|...+|.+++.|+       +   .+.|.|++
T Consensus         7 pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~   86 (143)
T 4d90_A            7 PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPR   86 (143)
T ss_dssp             CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCT
T ss_pred             cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcC
Confidence            5788899975     37899999999999975            34556667898999997       2   36899999


Q ss_pred             CCcCCCCC--CCCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          74 GYQGTYCG--TAMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        74 g~~g~~c~--~~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      ||.|..|+  +++|. .+|.++++|++   .++|.|++||+|.+|+..
T Consensus        87 G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~  134 (143)
T 4d90_A           87 GFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYK  134 (143)
T ss_dssp             TEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred             CCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceec
Confidence            99999996  45676 68999999974   368999999999999753

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.69  E-value=1.7e-17  Score=112.64  Aligned_cols=111  Identities=32%  Similarity=0.811  Sum_probs=90.6

Q ss_pred             CccCCCCCcCCCCCCC-----------CCCC-----CCCCCcEecCCCceeCC------CCCccCCCCCCCCCCCC---C
Q psy6687           1 MCQCPKGYQGTYCGTA-----------MCFP-----QCLNNGTCTAPGVCSCP------PGFQGLHCEGGPGPGCD---Q   55 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~-----------~c~~-----~c~~~g~C~~~~~C~c~------~g~~g~~c~~~~~~~~~---~   55 (116)
                      .|.|.+||+|..|+..           .|..     .|.++|.|.. +.|.|.      ++|+|..|+.+...|..   .
T Consensus       447 ~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~  525 (687)
T 3k6s_B          447 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ  525 (687)
T ss_dssp             SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-TEEEECCCCSTTCCEESTTSCEESSCSCEETTE
T ss_pred             EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-CEEEcCCCCCCCCCccccccccccccccCCCCc
Confidence            4889999999999831           3643     3889999985 799999      99999999855555542   2


Q ss_pred             CCCC--CceeCCCCceecCCCCcCCCCC----CCCCCC----CCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          56 KCSN--GGWCDSQQMCQCPKGYQGTYCG----TAMCFP----QCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        56 ~c~~--~g~c~~~~~c~C~~g~~g~~c~----~~~c~~----~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      +|.+  +|.|.. +.|.|.+||.|..|+    ...|..    +|.++|+|.. ++|.|.+||+|++|+.
T Consensus       526 ~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-g~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          526 VCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-NVCECHSGYQLPLCQE  592 (687)
T ss_dssp             ETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-SCBCCSTTCCTTTTCC
T ss_pred             CcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-CEEECCCCCcCCCCCC
Confidence            5887  899986 799999999999998    345652    6999999986 8999999999999985

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.68  E-value=1.4e-16  Score=108.27  Aligned_cols=107  Identities=26%  Similarity=0.665  Sum_probs=89.4

Q ss_pred             CccCC----CCCcCCCCCC--CCCCC----CCCCCcEecCCCceeCCCCCccCCCC--CCCCCCCC---CCCCCCceeCC
Q psy6687           1 MCQCP----KGYQGTYCGT--AMCFP----QCLNNGTCTAPGVCSCPPGFQGLHCE--GGPGPGCD---QKCSNGGWCDS   65 (116)
Q Consensus         1 ~C~C~----~g~~g~~c~~--~~c~~----~c~~~g~C~~~~~C~c~~g~~g~~c~--~~~~~~~~---~~c~~~g~c~~   65 (116)
                      .|.|.    +||+|..|+.  ..|..    +|.++|.|.. +.|.|.+||+|..|+  .....|..   .+|.++|.|..
T Consensus       505 ~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~  583 (690)
T 3fcs_B          505 QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC  583 (690)
T ss_dssp             SEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET
T ss_pred             eeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC
Confidence            47898    9999999974  45763    5888999987 899999999999998  44556654   46999999987


Q ss_pred             CCceec-CCCCcCCCCCC-CCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          66 QQMCQC-PKGYQGTYCGT-AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        66 ~~~c~C-~~g~~g~~c~~-~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                       +.|.| .+||.|..|+. ..|..+|.+++.|+.     |..+|+|++|+.
T Consensus       584 -g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~-----C~~g~tG~~C~~  628 (690)
T 3fcs_B          584 -GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE-----CKKFDRGALHDE  628 (690)
T ss_dssp             -TEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT-----TTTTCCSSSSSS
T ss_pred             -CEEECCCCCccCCCcCcCCCCCCCCCCCCCccc-----CCCCCccCCCCc
Confidence             79999 99999999997 667788999998875     899999997643

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.65  E-value=6.4e-16  Score=100.44  Aligned_cols=112  Identities=35%  Similarity=0.849  Sum_probs=86.3

Q ss_pred             ccCCCCCcCCCCCCCCCCCCCCCCcEecC-CCceeCCCCCccCCCCCCCC----------CCC-CCCCCCCceeCC-CCc
Q psy6687           2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTA-PGVCSCPPGFQGLHCEGGPG----------PGC-DQKCSNGGWCDS-QQM   68 (116)
Q Consensus         2 C~C~~g~~g~~c~~~~c~~~c~~~g~C~~-~~~C~c~~g~~g~~c~~~~~----------~~~-~~~c~~~g~c~~-~~~   68 (116)
                      |.|.+||+|+.|+. .|. +|.++|+|.. ++.|.|++||.|..|+....          .|. ..+|.+++.|.. .+.
T Consensus       187 c~C~~g~~G~~C~~-~C~-~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~  264 (423)
T 2gy5_A          187 RRCEAQKWGPECNH-LCT-ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYG  264 (423)
T ss_dssp             CSSCTTEESTTSCE-ECC-CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTE
T ss_pred             CcCCCCCCCCCCCC-CCC-CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCe
Confidence            68999999999986 353 6889999986 68999999999999984211          111 234666667753 379


Q ss_pred             eecCCCCcCCCCCC--------CCCCC--CCCCCcEecCCCceeCCCCCcCCCCCCC
Q psy6687          69 CQCPKGYQGTYCGT--------AMCFP--QCLNNGTCTAPGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        69 c~C~~g~~g~~c~~--------~~c~~--~c~~~g~c~~~~~C~C~~g~~g~~C~~~  115 (116)
                      |.|+++|.|..|+.        ..|..  +|.++++|.+...|.|++||+|.+|+..
T Consensus       265 C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          265 CSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE  321 (423)
T ss_dssp             EECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBC
T ss_pred             EEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCceECCCCCcCCCCccC
Confidence            99999999998875        12321  6888999997778999999999999853

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.53  E-value=7.6e-17  Score=94.63  Aligned_cols=114  Identities=24%  Similarity=0.480  Sum_probs=88.3

Q ss_pred             CccCCCCCcCC---CCCC-CCCC-----CCCCCCcEecC--------CCceeCCCCCccCCCCCCCCCCCCCCCCCCcee
Q psy6687           1 MCQCPKGYQGT---YCGT-AMCF-----PQCLNNGTCTA--------PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC   63 (116)
Q Consensus         1 ~C~C~~g~~g~---~c~~-~~c~-----~~c~~~g~C~~--------~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c   63 (116)
                      +|.|++||+|.   .|+. ++|.     .+|.++++|++        .|.|.|++||.|..+.-.+++|...+|.+++.|
T Consensus        26 ~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C  105 (186)
T 1z1y_A           26 XCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGEC  105 (186)
T ss_dssp             EEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEE
T ss_pred             EeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEE
Confidence            37899999987   6753 4565     34888889964        357999999999865433567777789989999


Q ss_pred             C----CC---CceecCCCCcC-----CCCCC---CCCCCCC-CCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687          64 D----SQ---QMCQCPKGYQG-----TYCGT---AMCFPQC-LNNGTCTA---PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        64 ~----~~---~~c~C~~g~~g-----~~c~~---~~c~~~c-~~~g~c~~---~~~C~C~~g~~g~~C~~  114 (116)
                      +    +.   +.|.|++||.|     ..|+.   ++|..+| .++++|++   .++|.|++||+|..+++
T Consensus       106 ~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~  175 (186)
T 1z1y_A          106 IVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXN  175 (186)
T ss_dssp             EEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred             eeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccc
Confidence            7    43   68999999998     66763   4677789 88899984   37899999999988764

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.52  E-value=1.7e-14  Score=81.26  Aligned_cols=82  Identities=38%  Similarity=1.004  Sum_probs=68.4

Q ss_pred             ccCCCCCcCCCCCC--------------CCCCC-CCCCCcEec-------C---CCceeCCCCCccCCCCCCCCCCCCCC
Q psy6687           2 CQCPKGYQGTYCGT--------------AMCFP-QCLNNGTCT-------A---PGVCSCPPGFQGLHCEGGPGPGCDQK   56 (116)
Q Consensus         2 C~C~~g~~g~~c~~--------------~~c~~-~c~~~g~C~-------~---~~~C~c~~g~~g~~c~~~~~~~~~~~   56 (116)
                      |.|++||+|..|+.              ..|.. +|.++++|+       +   .+.|.|++||.|..|+.++++|...+
T Consensus        25 C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~  104 (143)
T 4d90_A           25 CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEP  104 (143)
T ss_dssp             EECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCC
T ss_pred             eECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCC
Confidence            88999999999865              23533 488889997       2   57899999999999987788888889


Q ss_pred             CCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687          57 CSNGGWCDSQ---QMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        57 c~~~g~c~~~---~~c~C~~g~~g~~c~~~   83 (116)
                      |.+++.|++.   +.|.|++||.|..++..
T Consensus       105 C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~  134 (143)
T 4d90_A          105 CKNGGICTDLVANYSCECPGEFMGRNCQYK  134 (143)
T ss_dssp             SCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred             CCCCCEeECCCCCeEeECCCCCccCCceec
Confidence            9999999753   58999999999999853

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.49  E-value=9.3e-15  Score=82.42  Aligned_cols=96  Identities=26%  Similarity=0.642  Sum_probs=73.9

Q ss_pred             CCCCCCCCCcEecCCCceeCCCCCcc---------CCCCCCCCCCCCC---CCCCCceeCCC---CceecCCCCcCCC--
Q psy6687          17 MCFPQCLNNGTCTAPGVCSCPPGFQG---------LHCEGGPGPGCDQ---KCSNGGWCDSQ---QMCQCPKGYQGTY--   79 (116)
Q Consensus        17 ~c~~~c~~~g~C~~~~~C~c~~g~~g---------~~c~~~~~~~~~~---~c~~~g~c~~~---~~c~C~~g~~g~~--   79 (116)
                      .|..+|.++++|++.+.|.|++||+|         ..|+ ++++|...   +|.+++.|++.   +.|.|++||.+..  
T Consensus         4 ~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~   82 (143)
T 2bou_A            4 GCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA   82 (143)
T ss_dssp             CCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred             CCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence            35667889999998899999999998         4564 56666654   78888899753   6899999999874  


Q ss_pred             ----------CC-CCCCC---CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          80 ----------CG-TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        80 ----------c~-~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                                |+ +++|.   .+|.++++|++   +|+|.|++||+|....
T Consensus        83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred             cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence                      43 34454   57888899985   3789999999987653

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.49  E-value=1.6e-14  Score=80.77  Aligned_cols=82  Identities=35%  Similarity=0.938  Sum_probs=68.8

Q ss_pred             CccCCCCCcCCCCCC--CCCCC-CCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCC---Cceec
Q psy6687           1 MCQCPKGYQGTYCGT--AMCFP-QCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQC   71 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~--~~c~~-~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~---~~c~C   71 (116)
                      .|.|++||+|..|+.  +.|.. +|.++++|++   .|.|.|++||.|..|+.++++|...+|.+++.|++.   +.|.|
T Consensus        29 ~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C  108 (135)
T 2vj3_A           29 ECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCEC  108 (135)
T ss_dssp             EEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCSTTTCEEEECSSCEEEEC
T ss_pred             EEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcCCCCEeECCCCCeEEEC
Confidence            378999999999973  45654 5888899975   478999999999999877778888899999999753   68999


Q ss_pred             CCCCcCCCCCC
Q psy6687          72 PKGYQGTYCGT   82 (116)
Q Consensus        72 ~~g~~g~~c~~   82 (116)
                      ++||.|..|++
T Consensus       109 ~~G~~G~~C~~  119 (135)
T 2vj3_A          109 PTGFTGHLCQV  119 (135)
T ss_dssp             CTTEESSSSCE
T ss_pred             CCCCcCCccCc
Confidence            99999999973

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.46  E-value=3.7e-14  Score=74.09  Aligned_cols=78  Identities=28%  Similarity=0.595  Sum_probs=49.9

Q ss_pred             CceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCC---CCCCC-CCCCCCcEec-----CCCcee
Q psy6687          32 GVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG---TAMCF-PQCLNNGTCT-----APGVCS  102 (116)
Q Consensus        32 ~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~---~~~c~-~~c~~~g~c~-----~~~~C~  102 (116)
                      |.|+|.+||+|..++  ++++...+|.+..   ..+.|.|++||.  .|+   ++.|. .+|.++|+|+     ..+.|.
T Consensus         2 y~C~C~~g~~g~~c~--~~~c~~~pC~n~~---~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~   74 (91)
T 1tpg_A            2 YQVICRDEKTQMIYQ--QHQSWLRPVLRSN---RVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQ   74 (91)
T ss_dssp             CCCCCBCSSSCCBCC--SSCEEEEECSSSS---CEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEE
T ss_pred             eeeECCCCCcCCeEC--CCcccCCccccCC---CCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeE
Confidence            567777777777764  3444444444321   125777888776  665   34455 5677777776     246788


Q ss_pred             CCCCCcCCCCCCCC
Q psy6687         103 CPPGFQGLHCEGGT  116 (116)
Q Consensus       103 C~~g~~g~~C~~~~  116 (116)
                      |++||+|.+|++++
T Consensus        75 C~~G~~G~~Ce~~i   88 (91)
T 1tpg_A           75 CPEGFAGKSCEIDT   88 (91)
T ss_dssp             CCTTCBSSSCCBCS
T ss_pred             CCCCCcCCcCCcCC
Confidence            88888888887553

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.44  E-value=1.3e-13  Score=93.94  Aligned_cols=94  Identities=34%  Similarity=0.809  Sum_probs=76.6

Q ss_pred             CccCC------CCCcCCCCC--CCCCCC----CCCC--CcEecCCCceeCCCCCccCCCCCC--CCCCCCC---CCCCCc
Q psy6687           1 MCQCP------KGYQGTYCG--TAMCFP----QCLN--NGTCTAPGVCSCPPGFQGLHCEGG--PGPGCDQ---KCSNGG   61 (116)
Q Consensus         1 ~C~C~------~g~~g~~c~--~~~c~~----~c~~--~g~C~~~~~C~c~~g~~g~~c~~~--~~~~~~~---~c~~~g   61 (116)
                      .|.|.      +||+|..|+  ...|..    .|.+  +|.|.. +.|.|.+||+|..|+..  ...|...   +|.++|
T Consensus       494 ~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G  572 (687)
T 3k6s_B          494 QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRG  572 (687)
T ss_dssp             EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSC
T ss_pred             EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCC
Confidence            37888      999999998  456763    3888  899986 79999999999999832  3445433   688899


Q ss_pred             eeCCCCceecCCCCcCCCCCC-CCCCCCCCCCcEec
Q psy6687          62 WCDSQQMCQCPKGYQGTYCGT-AMCFPQCLNNGTCT   96 (116)
Q Consensus        62 ~c~~~~~c~C~~g~~g~~c~~-~~c~~~c~~~g~c~   96 (116)
                      .|.. +.|.|.+||.|..|+. ..|..+|.+++.|+
T Consensus       573 ~C~~-g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~Cv  607 (687)
T 3k6s_B          573 RCRC-NVCECHSGYQLPLCQECPGCPSPCGKYISCA  607 (687)
T ss_dssp             CBCS-SCBCCSTTCCTTTTCCCTTSCCCCTTTHHHH
T ss_pred             cCCC-CEEECCCCCcCCCCCCCCCCCcccCCCCCCC
Confidence            9987 7999999999999996 45777898888886

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=99.41  E-value=9.7e-14  Score=82.89  Aligned_cols=92  Identities=34%  Similarity=0.779  Sum_probs=74.2

Q ss_pred             CCCCCcEecCCCceeCCCCCccCCCCCCCC---------CCC----CCCCCCCceeCCCCceecCCC------CcCCCCC
Q psy6687          21 QCLNNGTCTAPGVCSCPPGFQGLHCEGGPG---------PGC----DQKCSNGGWCDSQQMCQCPKG------YQGTYCG   81 (116)
Q Consensus        21 ~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~---------~~~----~~~c~~~g~c~~~~~c~C~~g------~~g~~c~   81 (116)
                      .|+++|.|.. +.|.|.+||+|..|+....         .|.    ..+|.++|.|.. +.|.|.++      |+|..|+
T Consensus        97 ~Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~Ce  174 (217)
T 2p28_B           97 LCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCE  174 (217)
T ss_dssp             TTTTSEEEET-TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTTSC
T ss_pred             ccCCCceEEC-CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCCcc
Confidence            4888999986 8999999999999984322         122    245888899986 79999999      5899998


Q ss_pred             --CCCCCC----CCCCC--cEecCCCceeCCCCCcCCCCCCC
Q psy6687          82 --TAMCFP----QCLNN--GTCTAPGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        82 --~~~c~~----~c~~~--g~c~~~~~C~C~~g~~g~~C~~~  115 (116)
                        ...|..    +|.++  |+|.. ++|.|.+||+|..|+..
T Consensus       175 ~~~~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G~~C~~~  215 (217)
T 2p28_B          175 CDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQHH  215 (217)
T ss_dssp             EESSCSCEETTEETTCTTTEEEET-TEEEECTTEESTTSCEE
T ss_pred             cCCccCCCCCCCCCCCCCCcEEeC-CeeECCCCCccCCcCCC
Confidence              456762    58887  99986 79999999999999853

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.33  E-value=8.7e-13  Score=68.87  Aligned_cols=78  Identities=23%  Similarity=0.551  Sum_probs=61.2

Q ss_pred             CccCCCCCcCCCCCCCCCCC-CCCCCcEecCCCceeCCCCCccCCCC-CCCCCCCCCCCCCCceeCC-----CCceecCC
Q psy6687           1 MCQCPKGYQGTYCGTAMCFP-QCLNNGTCTAPGVCSCPPGFQGLHCE-GGPGPGCDQKCSNGGWCDS-----QQMCQCPK   73 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~-~c~~~g~C~~~~~C~c~~g~~g~~c~-~~~~~~~~~~c~~~g~c~~-----~~~c~C~~   73 (116)
                      .|.|.+||+|..|+.+.|.. +|.+..   ..+.|.|++||+  .|+ .++++|...+|.++|.|+.     .+.|.|++
T Consensus         3 ~C~C~~g~~g~~c~~~~c~~~pC~n~~---~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~   77 (91)
T 1tpg_A            3 QVICRDEKTQMIYQQHQSWLRPVLRSN---RVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPE   77 (91)
T ss_dssp             CCCCBCSSSCCBCCSSCEEEEECSSSS---CEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCT
T ss_pred             eeECCCCCcCCeECCCcccCCccccCC---CCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCC
Confidence            48999999999998766532 455432   247899999997  787 4667788889999999963     36899999


Q ss_pred             CCcCCCCCCC
Q psy6687          74 GYQGTYCGTA   83 (116)
Q Consensus        74 g~~g~~c~~~   83 (116)
                      ||.|..|+++
T Consensus        78 G~~G~~Ce~~   87 (91)
T 1tpg_A           78 GFAGKSCEID   87 (91)
T ss_dssp             TCBSSSCCBC
T ss_pred             CCcCCcCCcC
Confidence            9999999853

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=99.25  E-value=6.6e-13  Score=87.36  Aligned_cols=79  Identities=32%  Similarity=0.799  Sum_probs=37.9

Q ss_pred             ceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCC
Q psy6687          33 VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC  112 (116)
Q Consensus        33 ~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C  112 (116)
                      ...|..+|.|..|+..  .| ..+|.+ |.|...+.|.|.++|.|..|++..|..+|.++|+|+..+.|.|++||+|.+|
T Consensus       378 p~~C~~~~~g~~c~~~--~C-~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C  453 (463)
T 2wg3_C          378 PEECRATVQPAQTLTS--EC-SRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQC  453 (463)
T ss_dssp             CGGGCCCCCCCCCCCC--HH-HHHCCS-EEECTTSCEEECTTEESTTSCEECC---------------------------
T ss_pred             cccCCCCCcCCCCccc--cc-cCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCCCEEECCCCcccCCC
Confidence            3567788888888643  23 335776 8998767999999999999998888889999999997789999999999999


Q ss_pred             CCC
Q psy6687         113 EGG  115 (116)
Q Consensus       113 ~~~  115 (116)
                      +..
T Consensus       454 ~~~  456 (463)
T 2wg3_C          454 EQV  456 (463)
T ss_dssp             ---
T ss_pred             CCC
Confidence            853

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=99.21  E-value=2e-12  Score=85.09  Aligned_cols=78  Identities=35%  Similarity=0.771  Sum_probs=40.3

Q ss_pred             ccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCC
Q psy6687           2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG   81 (116)
Q Consensus         2 C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~   81 (116)
                      ..|..+|.|..|+...|..+|.+ |.|...+.|.|.++|+|..|+..  .|. .+|.++|.|...+.|.|.+||.|..|+
T Consensus       379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~--~C~-~~C~~~g~C~~~~~C~C~~G~~G~~C~  454 (463)
T 2wg3_C          379 EECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTA--KCE-PACRHGGVCVRPNKCLCKKGYLGPQCE  454 (463)
T ss_dssp             GGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEE--CC-----------------------------
T ss_pred             ccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcC--cCC-CCCCCCCEECCCCEEECCCCcccCCCC
Confidence            46889999999988888777886 89987789999999999999733  343 489999999877899999999999998


Q ss_pred             CC
Q psy6687          82 TA   83 (116)
Q Consensus        82 ~~   83 (116)
                      ..
T Consensus       455 ~~  456 (463)
T 2wg3_C          455 QV  456 (463)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=99.20  E-value=2.1e-12  Score=77.16  Aligned_cols=80  Identities=30%  Similarity=0.759  Sum_probs=63.5

Q ss_pred             CccCCCCCcCCCCCCC-----------CCC-----CCCCCCcEecCCCceeCCCC------CccCCCCCCCCCCCCC---
Q psy6687           1 MCQCPKGYQGTYCGTA-----------MCF-----PQCLNNGTCTAPGVCSCPPG------FQGLHCEGGPGPGCDQ---   55 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~-----------~c~-----~~c~~~g~C~~~~~C~c~~g------~~g~~c~~~~~~~~~~---   55 (116)
                      +|.|.+||+|..|+.+           .|.     .+|+++|+|+. +.|.|.++      |+|..|+.+...|...   
T Consensus       108 ~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~  186 (217)
T 2p28_B          108 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ  186 (217)
T ss_dssp             EEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTTSCEESSCSCEETTE
T ss_pred             EEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCCcccCCccCCCCCCC
Confidence            3789999999999743           243     24888999985 79999999      5899998544455433   


Q ss_pred             CCCCC--ceeCCCCceecCCCCcCCCCCC
Q psy6687          56 KCSNG--GWCDSQQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        56 ~c~~~--g~c~~~~~c~C~~g~~g~~c~~   82 (116)
                      +|..+  |.|.. +.|.|.+||.|..|+.
T Consensus       187 ~C~~~~~G~C~~-g~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          187 VCGGPGRGLCFC-GKCRCHPGFEGSACQH  214 (217)
T ss_dssp             ETTCTTTEEEET-TEEEECTTEESTTSCE
T ss_pred             CCCCCCCcEEeC-CeeECCCCCccCCcCC
Confidence            58877  99986 7999999999999974

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.18  E-value=3.4e-11  Score=78.44  Aligned_cols=83  Identities=36%  Similarity=0.825  Sum_probs=61.3

Q ss_pred             CccCCCCCcCCCCCCC--------CCC------CCCCCCcEecC-CCceeCCCCCccCCCCCCC------CCCC-CCCCC
Q psy6687           1 MCQCPKGYQGTYCGTA--------MCF------PQCLNNGTCTA-PGVCSCPPGFQGLHCEGGP------GPGC-DQKCS   58 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~--------~c~------~~c~~~g~C~~-~~~C~c~~g~~g~~c~~~~------~~~~-~~~c~   58 (116)
                      .|.|++||+|..|+..        .|.      ..|.+++.|.. .+.|.|.++|.|..|+..-      ..|. .-+|.
T Consensus       217 ~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~  296 (423)
T 2gy5_A          217 ECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCN  296 (423)
T ss_dssp             CEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCT
T ss_pred             cEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcccccccCC
Confidence            4899999999999842        232      23666777763 6899999999999987411      0111 11578


Q ss_pred             CCceeCCCCceecCCCCcCCCCCCC
Q psy6687          59 NGGWCDSQQMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        59 ~~g~c~~~~~c~C~~g~~g~~c~~~   83 (116)
                      +++.|.....|.|+++|.|..|+..
T Consensus       297 ngg~C~~~~~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          297 NGEMCDRFQGCLCSPGWQGLQCERE  321 (423)
T ss_dssp             TCCEEETTTEEECCTTCBSTTSCBC
T ss_pred             CCCEecCCCceECCCCCcCCCCccC
Confidence            8899987667999999999999964

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.17  E-value=9.4e-12  Score=84.16  Aligned_cols=92  Identities=29%  Similarity=0.713  Sum_probs=73.1

Q ss_pred             CCCCCcEecC----CCce-eCCCCCcc--CCCCCCCCCCCCCC--CCCCc---eeCCC---Ccee-cCCCCcCCCCC---
Q psy6687          21 QCLNNGTCTA----PGVC-SCPPGFQG--LHCEGGPGPGCDQK--CSNGG---WCDSQ---QMCQ-CPKGYQGTYCG---   81 (116)
Q Consensus        21 ~c~~~g~C~~----~~~C-~c~~g~~g--~~c~~~~~~~~~~~--c~~~g---~c~~~---~~c~-C~~g~~g~~c~---   81 (116)
                      +|.++++|++    +|+| .|++||+|  ..|+ .+.+|...+  |.+++   .|.+.   ++|. |++||.|..++   
T Consensus        10 PC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g   88 (634)
T 1yo8_A           10 PCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVG   88 (634)
T ss_dssp             CSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESS
T ss_pred             CCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccc
Confidence            5888888874    3789 99999998  7897 778887776  98887   88753   6898 99999988754   


Q ss_pred             -------------CCCCC---CCCCCCcEecC-------CCceeCCCCCcC--CCCC
Q psy6687          82 -------------TAMCF---PQCLNNGTCTA-------PGVCSCPPGFQG--LHCE  113 (116)
Q Consensus        82 -------------~~~c~---~~c~~~g~c~~-------~~~C~C~~g~~g--~~C~  113 (116)
                                   +.+|.   .+|.++++|++       .++|.|++||+|  ..|+
T Consensus        89 ~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A           89 LEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             SHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             ccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence                         45675   37988899973       368999999988  6775

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.14  E-value=5.2e-13  Score=78.29  Aligned_cols=87  Identities=28%  Similarity=0.577  Sum_probs=68.0

Q ss_pred             CCCCCcEecC---CCceeCCCCCccC---CCCCCCCCCC----CCCCCCCceeCCC--------CceecCCCCcCCCC--
Q psy6687          21 QCLNNGTCTA---PGVCSCPPGFQGL---HCEGGPGPGC----DQKCSNGGWCDSQ--------QMCQCPKGYQGTYC--   80 (116)
Q Consensus        21 ~c~~~g~C~~---~~~C~c~~g~~g~---~c~~~~~~~~----~~~c~~~g~c~~~--------~~c~C~~g~~g~~c--   80 (116)
                      +|.+ ++|++   .|.|.|++||+|.   .|+ ++++|.    ..+|.+++.|++.        +.|.|++||.|..+  
T Consensus        12 pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C   89 (186)
T 1z1y_A           12 ICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTC   89 (186)
T ss_dssp             CCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEE
T ss_pred             CCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCC
Confidence            5764 58875   5789999999987   776 567776    5678888888642        47999999998744  


Q ss_pred             CCCCCC-CCCCCCcEec----C---CCceeCCCCCcC
Q psy6687          81 GTAMCF-PQCLNNGTCT----A---PGVCSCPPGFQG  109 (116)
Q Consensus        81 ~~~~c~-~~c~~~g~c~----~---~~~C~C~~g~~g  109 (116)
                      .+++|. .+|.++++|+    +   .++|.|++||+|
T Consensus        90 ~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g  126 (186)
T 1z1y_A           90 VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVP  126 (186)
T ss_dssp             EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred             CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence            456666 5798889997    4   379999999988

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.08  E-value=1.3e-13  Score=84.06  Aligned_cols=98  Identities=16%  Similarity=0.145  Sum_probs=70.7

Q ss_pred             CcCCCCCCCC--CCCCCCCCcEecC---CCceeCCCCCccCCCCCCCCC------CCCCCCCCCceeCCCCceecCCCCc
Q psy6687           8 YQGTYCGTAM--CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGP------GCDQKCSNGGWCDSQQMCQCPKGYQ   76 (116)
Q Consensus         8 ~~g~~c~~~~--c~~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~------~~~~~c~~~g~c~~~~~c~C~~g~~   76 (116)
                      |.|..++...  +..+|.++|+|++   +|.|.|++||+|..|+..+++      +...||.+++++           |.
T Consensus        24 ~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc-----------~~   92 (267)
T 4fbr_A           24 LIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW-----------VL   92 (267)
T ss_dssp             ECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEE-----------EC
T ss_pred             eeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCee-----------ec
Confidence            4455554321  2335888999986   689999999999999977665      555566666554           34


Q ss_pred             CCCCCCC-CCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCCC
Q psy6687          77 GTYCGTA-MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGT  116 (116)
Q Consensus        77 g~~c~~~-~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~~  116 (116)
                      |..|++. +|. .+|.++++|++   +|+|.|++||+|.+|+.++
T Consensus        93 G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~  137 (267)
T 4fbr_A           93 GARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDT  137 (267)
T ss_dssp             CCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCE
T ss_pred             cCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCc
Confidence            5666643 354 68999999974   4899999999999998653

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.05  E-value=7.5e-14  Score=85.18  Aligned_cols=104  Identities=17%  Similarity=0.185  Sum_probs=65.5

Q ss_pred             CccCCCCCcCCCCCCC--C------CCC------------------------CCCCCcEecC---CCceeCCCCCccCCC
Q psy6687           1 MCQCPKGYQGTYCGTA--M------CFP------------------------QCLNNGTCTA---PGVCSCPPGFQGLHC   45 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~--~------c~~------------------------~c~~~g~C~~---~~~C~c~~g~~g~~c   45 (116)
                      .|.|+.||+|..|+..  +      |..                        +|.++++|++   +|+|.|+++|+|..|
T Consensus        54 ~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~C  133 (267)
T 4fbr_A           54 NGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVT  133 (267)
T ss_dssp             TTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEC
T ss_pred             EEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCC
Confidence            4789999999888642  1      111                        2555555543   577788888888888


Q ss_pred             CCCCCCCC------CCCCCCCceeCCCCceecCCCCcCCCCCCCC--CCCCCCCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687          46 EGGPGPGC------DQKCSNGGWCDSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        46 ~~~~~~~~------~~~c~~~g~c~~~~~c~C~~g~~g~~c~~~~--c~~~c~~~g~c~~---~~~C~C~~g~~g~~C~~  114 (116)
                      +..++.+.      ..+|.+.+.+           +.|.++++.+  +..+|.++++|++   +|+|.|++||+|.+|+.
T Consensus       134 e~~~d~C~n~~~c~s~pC~ngg~c-----------~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~  202 (267)
T 4fbr_A          134 DGDTYSVENQWGGSAAPWHSGGVW-----------VLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP  202 (267)
T ss_dssp             CCCEEEEEEECSSTTSCCEEEEEE-----------ECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET
T ss_pred             CCCcccccccCCcCCccccCCcce-----------ecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc
Confidence            76554422      2233322222           3455565432  2256888888873   48999999999998876


Q ss_pred             C
Q psy6687         115 G  115 (116)
Q Consensus       115 ~  115 (116)
                      +
T Consensus       203 ~  203 (267)
T 4fbr_A          203 D  203 (267)
T ss_dssp             T
T ss_pred             c
Confidence            5

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.92  E-value=1e-10  Score=65.82  Aligned_cols=81  Identities=20%  Similarity=0.560  Sum_probs=59.6

Q ss_pred             CccCCCCCcC---------CCCC-CCCCCC----CCCCCcEecC---CCceeCCCCCccCCCC-----------CCCCCC
Q psy6687           1 MCQCPKGYQG---------TYCG-TAMCFP----QCLNNGTCTA---PGVCSCPPGFQGLHCE-----------GGPGPG   52 (116)
Q Consensus         1 ~C~C~~g~~g---------~~c~-~~~c~~----~c~~~g~C~~---~~~C~c~~g~~g~~c~-----------~~~~~~   52 (116)
                      .|.|++||+|         ..|+ .++|..    +|.++++|++   .|.|.|++||.|..++           .++++|
T Consensus        20 ~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC   99 (143)
T 2bou_A           20 ACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDEC   99 (143)
T ss_dssp             CEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHH
T ss_pred             EEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCc
Confidence            4889999998         4564 345643    5888899975   5789999999987432           145555


Q ss_pred             CC--CCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          53 CD--QKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        53 ~~--~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      ..  .+|.+++.|++.   +.|.|++||.+....
T Consensus       100 ~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A          100 SSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             HHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred             cCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence            42  578888888753   689999999987765

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.70  E-value=6.1e-09  Score=48.94  Aligned_cols=29  Identities=34%  Similarity=0.891  Sum_probs=17.7

Q ss_pred             CCCCCCcEec--------CCCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCT--------APGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~--------~~~~C~C~~g~~g~~C~~~  115 (116)
                      .+|.++|+|.        +.|.|.|++||+|.+||.+
T Consensus        14 ~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~   50 (55)
T 3u7u_G           14 TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY   50 (55)
T ss_dssp             TTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence            4566666662        1356777777777777643

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.68  E-value=3.4e-08  Score=67.12  Aligned_cols=81  Identities=32%  Similarity=0.794  Sum_probs=61.3

Q ss_pred             Cc-cCCCCCcC--CCCCC-CCCCC-C--CCCCc---EecC---CCcee-CCCCCccCCCC--------------CCCCCC
Q psy6687           1 MC-QCPKGYQG--TYCGT-AMCFP-Q--CLNNG---TCTA---PGVCS-CPPGFQGLHCE--------------GGPGPG   52 (116)
Q Consensus         1 ~C-~C~~g~~g--~~c~~-~~c~~-~--c~~~g---~C~~---~~~C~-c~~g~~g~~c~--------------~~~~~~   52 (116)
                      .| .|++||+|  ..|+. .+|.. +  |.+++   +|++   .|+|. |++||.|..++              ..+.+|
T Consensus        26 ~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC  105 (634)
T 1yo8_A           26 SCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPC  105 (634)
T ss_dssp             EECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTT
T ss_pred             ECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccc
Confidence            37 89999998  67863 45753 4  88887   8975   57898 99999988754              245666


Q ss_pred             CC--CCCCCCceeCC-------CCceecCCCCcC--CCCC
Q psy6687          53 CD--QKCSNGGWCDS-------QQMCQCPKGYQG--TYCG   81 (116)
Q Consensus        53 ~~--~~c~~~g~c~~-------~~~c~C~~g~~g--~~c~   81 (116)
                      ..  .+|.+++.|++       .++|.|++||.|  ..|+
T Consensus       106 ~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A          106 KDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             TTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             cCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence            64  47988888863       258999999987  6785

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.67  E-value=4.1e-10  Score=61.37  Aligned_cols=76  Identities=30%  Similarity=0.654  Sum_probs=50.9

Q ss_pred             CCceeCCCCCccCCCCCC--CCCCCCCCCCCCceeCC--CCceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---
Q psy6687          31 PGVCSCPPGFQGLHCEGG--PGPGCDQKCSNGGWCDS--QQMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---   97 (116)
Q Consensus        31 ~~~C~c~~g~~g~~c~~~--~~~~~~~~c~~~g~c~~--~~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---   97 (116)
                      .|.|.|++||.|...+..  ...|...+|.  +.|.+  .+.|.|++||.   |..|. +++|.  .+|  +++|++   
T Consensus        23 ~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g   98 (118)
T 1dx5_I           23 SYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDPNTQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPG   98 (118)
T ss_dssp             CEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECTTSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSS
T ss_pred             CEEeECCCCccccCCCCCccccccCCCCCC--CcccCCCCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCCC
Confidence            689999999998744210  0112222232  45554  37899999999   77775 44554  567  578874   


Q ss_pred             CCceeCCCCCcCC
Q psy6687          98 PGVCSCPPGFQGL  110 (116)
Q Consensus        98 ~~~C~C~~g~~g~  110 (116)
                      .|+|.|++||++.
T Consensus        99 ~y~C~C~~G~~g~  111 (118)
T 1dx5_I           99 TFECICGPDSALA  111 (118)
T ss_dssp             SEEEEECSSSSCE
T ss_pred             CEEEECCCCCccC
Confidence            4899999999864

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.57  E-value=2.8e-08  Score=56.04  Aligned_cols=64  Identities=31%  Similarity=0.797  Sum_probs=43.7

Q ss_pred             CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC-CCCC---CCCCCCcEe-cC---CCceeCCCCCc----CCCC
Q psy6687          48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT-AMCF---PQCLNNGTC-TA---PGVCSCPPGFQ----GLHC  112 (116)
Q Consensus        48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~-~~c~---~~c~~~g~c-~~---~~~C~C~~g~~----g~~C  112 (116)
                      ++++|...+|.+++.|++.   +.|.|++||.|..|+. +.|.   .+|.+  +| ++   ++.|.|++||+    |..|
T Consensus        47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C  124 (146)
T 1x7a_L           47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSC  124 (146)
T ss_dssp             ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSE
T ss_pred             CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcC
Confidence            5567777788888888652   6889999999888873 4554   23443  66 43   47899999988    7766


Q ss_pred             C
Q psy6687         113 E  113 (116)
Q Consensus       113 ~  113 (116)
                      +
T Consensus       125 ~  125 (146)
T 1x7a_L          125 K  125 (146)
T ss_dssp             E
T ss_pred             C
Confidence            4

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.56  E-value=5.9e-08  Score=64.97  Aligned_cols=82  Identities=32%  Similarity=0.649  Sum_probs=31.4

Q ss_pred             Cce-eCCCCCccCCCCCCCCCCCCCCCCCCce------eCC-CCceecCCCCcCCCCCC------------CCCC-CCCC
Q psy6687          32 GVC-SCPPGFQGLHCEGGPGPGCDQKCSNGGW------CDS-QQMCQCPKGYQGTYCGT------------AMCF-PQCL   90 (116)
Q Consensus        32 ~~C-~c~~g~~g~~c~~~~~~~~~~~c~~~g~------c~~-~~~c~C~~g~~g~~c~~------------~~c~-~~c~   90 (116)
                      ..| .|.+||.|..++ ....|..-+|...+.      |.. .+.|.|+++|.|..|+.            ..|. .+|.
T Consensus       418 ~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~  496 (525)
T 4aqs_A          418 ERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCD  496 (525)
T ss_dssp             TTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------
T ss_pred             CcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCC
Confidence            345 577788777665 223333334544444      432 36899999999999963            1233 3465


Q ss_pred             CCcEec----C-CCceeCCCCCcCCCCCC
Q psy6687          91 NNGTCT----A-PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        91 ~~g~c~----~-~~~C~C~~g~~g~~C~~  114 (116)
                      +++.+.    . +++|.|++||+|.+|+.
T Consensus       497 ~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq  525 (525)
T 4aqs_A          497 LGGALNNSCSEDSGQCSCLPHMIGRQCNE  525 (525)
T ss_dssp             -----------------------------
T ss_pred             CCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence            655443    2 36899999999999973

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.51  E-value=1.2e-07  Score=51.25  Aligned_cols=76  Identities=25%  Similarity=0.614  Sum_probs=47.2

Q ss_pred             CCCCCCCCcEecC---CCceeCCCCCccCCCCCCCC--CCCCC--CCCCCceeCCC---CceecCCCCcCC----CCCCC
Q psy6687          18 CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPG--PGCDQ--KCSNGGWCDSQ---QMCQCPKGYQGT----YCGTA   83 (116)
Q Consensus        18 c~~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~--~~~~~--~c~~~g~c~~~---~~c~C~~g~~g~----~c~~~   83 (116)
                      |...|.++++|++   .|.|.|++||+|..|+..++  +|...  .|..  .|++.   +.|.|++||.+.    .|...
T Consensus        18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~   95 (114)
T 1aut_L           18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPA   95 (114)
T ss_dssp             SSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred             ccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCCCCccCcC
Confidence            5555888899976   57999999999999985432  34321  1221  66542   689999999853    34321


Q ss_pred             CCCCCCCCCcEec
Q psy6687          84 MCFPQCLNNGTCT   96 (116)
Q Consensus        84 ~c~~~c~~~g~c~   96 (116)
                       -..+|.+.+.++
T Consensus        96 -~~~pC~~~~~~i  107 (114)
T 1aut_L           96 -VKFPCGRPWKRM  107 (114)
T ss_dssp             -SSSCTTCCC---
T ss_pred             -cccCCCCCCccC
Confidence             124676666554

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.49  E-value=2.4e-08  Score=56.07  Aligned_cols=66  Identities=29%  Similarity=0.708  Sum_probs=43.8

Q ss_pred             CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC--CCCC-CCCCCCc---EecC----CCceeCCCCCc----CC
Q psy6687          48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT--AMCF-PQCLNNG---TCTA----PGVCSCPPGFQ----GL  110 (116)
Q Consensus        48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~--~~c~-~~c~~~g---~c~~----~~~C~C~~g~~----g~  110 (116)
                      ++++|...+|.+++.|++.   +.|.|++||.|..|+.  ..+. .++.+++   +|++    .++|.|++||+    |.
T Consensus        46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~  125 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV  125 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSS
T ss_pred             ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCC
Confidence            4555666678887888652   5788888888888874  3332 1233333   6653    47899999988    77


Q ss_pred             CCC
Q psy6687         111 HCE  113 (116)
Q Consensus       111 ~C~  113 (116)
                      .|+
T Consensus       126 ~C~  128 (142)
T 2c4f_L          126 SCT  128 (142)
T ss_dssp             CEE
T ss_pred             CCC
Confidence            764

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.48  E-value=6.3e-08  Score=45.47  Aligned_cols=42  Identities=29%  Similarity=0.575  Sum_probs=30.4

Q ss_pred             cCCCCCCCCCCCCCCCCCCceeC-----C---CCceecCCCCcCCCCCCC
Q psy6687          42 GLHCEGGPGPGCDQKCSNGGWCD-----S---QQMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        42 g~~c~~~~~~~~~~~c~~~g~c~-----~---~~~c~C~~g~~g~~c~~~   83 (116)
                      |..|+..+++|...||.++|+|.     .   .++|.|+++|.|.+|+..
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~   50 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY   50 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence            34555567777788888888883     2   368999999999999843

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.45  E-value=1.5e-07  Score=47.92  Aligned_cols=43  Identities=42%  Similarity=0.882  Sum_probs=21.8

Q ss_pred             CceecCCCCc--CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcCC
Q psy6687          67 QMCQCPKGYQ--GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        67 ~~c~C~~g~~--g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g~  110 (116)
                      ++|.|++||.  |..|. +++|.  .+|.+ ++|++   .|.|.|++||+|.
T Consensus        26 y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A           26 YRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             CCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred             EEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence            4556666654  44443 33342  34543 35543   2566666666554

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.44  E-value=2.4e-07  Score=50.05  Aligned_cols=51  Identities=31%  Similarity=0.860  Sum_probs=38.1

Q ss_pred             CCCCceeCCC---CceecCCCCcCCCCCCC----CCC---CCCCCCcEecC---CCceeCCCCCcC
Q psy6687          57 CSNGGWCDSQ---QMCQCPKGYQGTYCGTA----MCF---PQCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        57 c~~~g~c~~~---~~c~C~~g~~g~~c~~~----~c~---~~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      |.++++|++.   ++|.|++||.|..|+..    +|.   ..|..  +|++   .|+|.|++||++
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~   85 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKL   85 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEE
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeE
Confidence            7888999763   79999999999999842    343   12322  7764   479999999984

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.43  E-value=1.5e-08  Score=55.12  Aligned_cols=75  Identities=23%  Similarity=0.606  Sum_probs=53.3

Q ss_pred             CccCCCCCcCCCCCCCCCCCCCCCC---cEecC--CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCCC---Cc
Q psy6687           1 MCQCPKGYQGTYCGTAMCFPQCLNN---GTCTA--PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDSQ---QM   68 (116)
Q Consensus         1 ~C~C~~g~~g~~c~~~~c~~~c~~~---g~C~~--~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~~---~~   68 (116)
                      .|.|++||+|...+...|..+|.++   +.|++  .|.|.|++||.   |..|. ++++|.. .+|  ++.|++.   +.
T Consensus        25 ~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~-dideC~~~~~C--~~~C~n~~g~y~  101 (118)
T 1dx5_I           25 LCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICT-DIDECENGGFC--SGVCHNLPGTFE  101 (118)
T ss_dssp             EEECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEE-ECCHHHHCSSC--SSEEEECSSSEE
T ss_pred             EeECCCCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccc-cccccCCCCCC--cCeEEeCCCCEE
Confidence            3789999998865444454444333   56765  57899999999   77784 6666655 567  5677643   68


Q ss_pred             eecCCCCcCC
Q psy6687          69 CQCPKGYQGT   78 (116)
Q Consensus        69 c~C~~g~~g~   78 (116)
                      |.|++||.+.
T Consensus       102 C~C~~G~~g~  111 (118)
T 1dx5_I          102 CICGPDSALA  111 (118)
T ss_dssp             EEECSSSSCE
T ss_pred             EECCCCCccC
Confidence            9999999865

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.40  E-value=2.3e-07  Score=47.75  Aligned_cols=10  Identities=40%  Similarity=1.212  Sum_probs=4.7

Q ss_pred             CceeCCCCCc
Q psy6687          32 GVCSCPPGFQ   41 (116)
Q Consensus        32 ~~C~c~~g~~   41 (116)
                      |.|.|++||.
T Consensus        25 y~C~C~~G~~   34 (87)
T 1z6c_A           25 FECECPEGYR   34 (87)
T ss_dssp             CCCSSSTTCE
T ss_pred             EEEECCCCce
Confidence            4444444444

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.40  E-value=2.4e-08  Score=58.77  Aligned_cols=58  Identities=29%  Similarity=0.771  Sum_probs=10.9

Q ss_pred             CCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC---CCCC---CCCCCCcEecC---CCceeCCCCCc
Q psy6687          49 PGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT---AMCF---PQCLNNGTCTA---PGVCSCPPGFQ  108 (116)
Q Consensus        49 ~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~---~~c~---~~c~~~g~c~~---~~~C~C~~g~~  108 (116)
                      ++.|...+|.++|.|.+.   +.|.|++||.|..|+.   +.|.   .+|.+  +|.+   .|.|.|++||+
T Consensus        42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT  111 (195)
T ss_dssp             ---------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred             CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence            444444555555555432   4566666666666653   2243   12432  4542   24566666665

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.36  E-value=2.4e-08  Score=58.72  Aligned_cols=74  Identities=28%  Similarity=0.702  Sum_probs=24.6

Q ss_pred             CCCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCC-CCCCCC--CCCCCceeCCC---CceecCCCCc----CCCCC
Q psy6687          16 AMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGP-GPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQ----GTYCG   81 (116)
Q Consensus        16 ~~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~-~~~~~~--~c~~~g~c~~~---~~c~C~~g~~----g~~c~   81 (116)
                      +.|. .+|.++++|++   .|.|.|++||.|..|+..+ +.|...  +|.+  .|.+.   +.|.|++||.    |..|.
T Consensus        43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             --------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             cccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCccc
Confidence            3454 35888899975   5899999999999998655 556542  3543  67542   6899999999    88887


Q ss_pred             CCCCCCCCCCC
Q psy6687          82 TAMCFPQCLNN   92 (116)
Q Consensus        82 ~~~c~~~c~~~   92 (116)
                      ... ..+|.+.
T Consensus       121 ~~~-~~PC~~~  130 (195)
T 1nfu_B          121 PTG-PYPCGKQ  130 (195)
T ss_dssp             ESS-SSCTTCC
T ss_pred             cCC-CCCCCCC
Confidence            321 2355443

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.35  E-value=1.9e-08  Score=46.87  Aligned_cols=38  Identities=37%  Similarity=0.819  Sum_probs=27.8

Q ss_pred             ceecCCCCcCCCCCCCCCCCCCCCCcEecC-------CCceeCCCCCcCCCCCC
Q psy6687          68 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTA-------PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        68 ~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~-------~~~C~C~~g~~g~~C~~  114 (116)
                      .|.|+++|.         ..+|.++|+|..       .+.|.|++||+|.+|+.
T Consensus         4 ~C~C~~g~~---------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A            4 TYKCPETFD---------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             CBCCCHHHH---------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             eeECCCCCc---------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            566777665         257778888873       25788999999988874

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.35  E-value=8.1e-07  Score=55.86  Aligned_cols=56  Identities=32%  Similarity=0.883  Sum_probs=45.3

Q ss_pred             CCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCC---CCCCCCceeCCC---CceecCCCCcCC
Q psy6687          21 QCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD---QKCSNGGWCDSQ---QMCQCPKGYQGT   78 (116)
Q Consensus        21 ~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~---~~c~~~g~c~~~---~~c~C~~g~~g~   78 (116)
                      +|.+++.|.+   .+.|.|++||.|..|+.++++|..   .+|.+  .|.+.   +.|.|++||.+.
T Consensus        12 pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B           12 PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred             CCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence            5778888875   578999999999999878888875   56765  77653   789999999864

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.33  E-value=1.5e-06  Score=54.71  Aligned_cols=60  Identities=30%  Similarity=0.779  Sum_probs=46.6

Q ss_pred             CCCCCCCCCCCCceeCCC---CceecCCCCcCCCCC--CCCCC----CCCCCCcEecC---CCceeCCCCCcCC
Q psy6687          49 PGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG--TAMCF----PQCLNNGTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        49 ~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~--~~~c~----~~c~~~g~c~~---~~~C~C~~g~~g~  110 (116)
                      +++|...+|.+++.|...   +.|.|++||.|..|+  +++|.    .+|.+  .|.+   .+.|.|++||.+.
T Consensus         5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred             CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence            455667788888888753   789999999999997  45675    35765  7875   4899999999864

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.31  E-value=3.5e-07  Score=46.53  Aligned_cols=56  Identities=29%  Similarity=0.751  Sum_probs=42.4

Q ss_pred             CCCCCcEecC---CCceeCCCCCc--cCCCCCCCCCCC-CCCCCCCceeCCC---CceecCCCCcCCC
Q psy6687          21 QCLNNGTCTA---PGVCSCPPGFQ--GLHCEGGPGPGC-DQKCSNGGWCDSQ---QMCQCPKGYQGTY   79 (116)
Q Consensus        21 ~c~~~g~C~~---~~~C~c~~g~~--g~~c~~~~~~~~-~~~c~~~g~c~~~---~~c~C~~g~~g~~   79 (116)
                      +|.+ +.|++   .|.|.|++||.  |..|+ ++++|. ..+|.+ +.|.+.   +.|.|++||.+..
T Consensus        13 ~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           13 VCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             SCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred             CcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence            5754 78876   58999999997  88885 566765 457765 578653   6899999998753

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.31  E-value=4.8e-07  Score=51.84  Aligned_cols=52  Identities=31%  Similarity=0.791  Sum_probs=32.8

Q ss_pred             eeCC-CCcee-cCCCCcCCCCCC---------------CCCC-CCCCCCc------EecC-CCceeCCCCCcCCCCC
Q psy6687          62 WCDS-QQMCQ-CPKGYQGTYCGT---------------AMCF-PQCLNNG------TCTA-PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        62 ~c~~-~~~c~-C~~g~~g~~c~~---------------~~c~-~~c~~~g------~c~~-~~~C~C~~g~~g~~C~  113 (116)
                      .|.. +++|+ |.++|.|.+|++               ..|. -.|...+      .|.. +++|.|+++|+|.+|+
T Consensus        69 ~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd  145 (162)
T 1klo_A           69 NCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG  145 (162)
T ss_dssp             CBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred             cccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence            4543 36774 777777777763               0111 1344443      5653 5789999999999986

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.30  E-value=2.9e-07  Score=49.18  Aligned_cols=66  Identities=35%  Similarity=0.676  Sum_probs=21.9

Q ss_pred             CCCcCCCCCCCCCCC---CCCCCcEecC---CCceeCCCCCcc---CCCCCCCCCCCC-CCCCCCceeCCC---CceecC
Q psy6687           6 KGYQGTYCGTAMCFP---QCLNNGTCTA---PGVCSCPPGFQG---LHCEGGPGPGCD-QKCSNGGWCDSQ---QMCQCP   72 (116)
Q Consensus         6 ~g~~g~~c~~~~c~~---~c~~~g~C~~---~~~C~c~~g~~g---~~c~~~~~~~~~-~~c~~~g~c~~~---~~c~C~   72 (116)
                      .+|+|+.|..++|..   .|.  ..|++   .|.|.|++||.+   ..|+ ++++|.. .+|.  +.|++.   +.|.|+
T Consensus        20 ~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~   94 (107)
T 2w2n_E           20 NLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCE   94 (107)
T ss_dssp             CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C----------------------------
T ss_pred             CCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEECC
Confidence            456666666555542   132  25543   466777777765   4554 4444432 2332  334331   445555


Q ss_pred             CCCc
Q psy6687          73 KGYQ   76 (116)
Q Consensus        73 ~g~~   76 (116)
                      +||.
T Consensus        95 ~Gy~   98 (107)
T 2w2n_E           95 EGFQ   98 (107)
T ss_dssp             ----
T ss_pred             CCce
Confidence            5554

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.30  E-value=5.3e-08  Score=54.11  Aligned_cols=64  Identities=30%  Similarity=0.764  Sum_probs=18.2

Q ss_pred             CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC---CCCC---CCCCCCcEecC---CCceeCCCCCc----CCC
Q psy6687          48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT---AMCF---PQCLNNGTCTA---PGVCSCPPGFQ----GLH  111 (116)
Q Consensus        48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~---~~c~---~~c~~~g~c~~---~~~C~C~~g~~----g~~  111 (116)
                      +++.|...+|.+++.|++.   +.|.|++||.|..|+.   +.|.   .+|.+  +|++   .+.|.|++||+    |..
T Consensus        41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~  118 (134)
T 2vh0_B           41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKA  118 (134)
T ss_dssp             ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSC
T ss_pred             CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCc
Confidence            4556666678887888652   6788888888888874   3354   23543  6653   36788988888    777


Q ss_pred             CC
Q psy6687         112 CE  113 (116)
Q Consensus       112 C~  113 (116)
                      |+
T Consensus       119 C~  120 (134)
T 2vh0_B          119 CI  120 (134)
T ss_dssp             EE
T ss_pred             cC
Confidence            64

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.29  E-value=3.1e-07  Score=61.54  Aligned_cols=79  Identities=22%  Similarity=0.512  Sum_probs=26.2

Q ss_pred             cCCCCCcCCCCCCC-CCCC-CCCCC------cEecC-CCceeCCCCCccCCCCC----------CCCCCCCCCCCCCcee
Q psy6687           3 QCPKGYQGTYCGTA-MCFP-QCLNN------GTCTA-PGVCSCPPGFQGLHCEG----------GPGPGCDQKCSNGGWC   63 (116)
Q Consensus         3 ~C~~g~~g~~c~~~-~c~~-~c~~~------g~C~~-~~~C~c~~g~~g~~c~~----------~~~~~~~~~c~~~g~c   63 (116)
                      .|.+||+|..++.. .|.. +|...      +.|.. ++.|.|.++|.|..|+.          .++.|..-+|.++|.+
T Consensus       422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~  501 (525)
T 4aqs_A          422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGAL  501 (525)
T ss_dssp             EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------------------------
T ss_pred             CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCcc
Confidence            35555555544321 2321 24443      34432 57899999999999963          2233444456666654


Q ss_pred             CC-----CCceecCCCCcCCCCC
Q psy6687          64 DS-----QQMCQCPKGYQGTYCG   81 (116)
Q Consensus        64 ~~-----~~~c~C~~g~~g~~c~   81 (116)
                      ..     +++|.|++||.|..|+
T Consensus       502 ~~~C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          502 NNSCSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             -----------------------
T ss_pred             CCccCCCCCeeECCCCCcCCCCC
Confidence            32     2589999999999986

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.25  E-value=4.8e-07  Score=40.73  Aligned_cols=28  Identities=32%  Similarity=0.781  Sum_probs=20.3

Q ss_pred             CCCCCcEec-----CCCceeCCCCCcCCCCCCC
Q psy6687          88 QCLNNGTCT-----APGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        88 ~c~~~g~c~-----~~~~C~C~~g~~g~~C~~~  115 (116)
                      +|.++|+|.     ..+.|.|++||+|.+|+.+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~   42 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR   42 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence            677777775     2367888888888888754

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=98.25  E-value=1.1e-06  Score=50.93  Aligned_cols=37  Identities=46%  Similarity=1.100  Sum_probs=32.6

Q ss_pred             CCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          78 TYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        78 ~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|..++|...|.++|.|+....|.|++||.|..|+.
T Consensus       144 K~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          144 KTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG  180 (188)
T ss_dssp             EEECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred             ccccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence            4566678888999999999889999999999999985

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.24  E-value=1.4e-06  Score=37.90  Aligned_cols=27  Identities=48%  Similarity=1.136  Sum_probs=18.5

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                      .+|.++++|++   .+.|.|++||+|.+|+
T Consensus         9 ~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            9 NPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            46666677753   3577777777777776

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.23  E-value=2.5e-07  Score=51.89  Aligned_cols=62  Identities=34%  Similarity=0.873  Sum_probs=44.8

Q ss_pred             CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCc---eeCC----CCceecCCCCc----CCCCC
Q psy6687          20 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG---WCDS----QQMCQCPKGYQ----GTYCG   81 (116)
Q Consensus        20 ~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g---~c~~----~~~c~C~~g~~----g~~c~   81 (116)
                      .+|.++++|++   .|.|.|++||+|..|+..++.+...++.+++   .|++    .+.|.|++||.    |..|.
T Consensus        53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~  128 (142)
T 2c4f_L           53 SPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT  128 (142)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred             CCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence            36888899975   4789999999999998544443222333444   6653    36899999998    77776

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.22  E-value=5.7e-07  Score=50.66  Aligned_cols=62  Identities=32%  Similarity=0.858  Sum_probs=45.6

Q ss_pred             CCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCC--CCCCCcee-CC---CCceecCCCCc----CCCCC
Q psy6687          17 MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ--KCSNGGWC-DS---QQMCQCPKGYQ----GTYCG   81 (116)
Q Consensus        17 ~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~--~c~~~g~c-~~---~~~c~C~~g~~----g~~c~   81 (116)
                      .|. .+|.++++|++   .|.|.|++||+|..|+. +++|...  +|..  .| .+   .+.|.|++||.    |..|+
T Consensus        50 eC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~-~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L           50 QCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCEL-DATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCE-ECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred             cCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCC-CccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence            453 36888899975   57899999999999974 3555542  3443  67 44   37899999998    77776

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.21  E-value=9.4e-08  Score=53.11  Aligned_cols=63  Identities=32%  Similarity=0.832  Sum_probs=19.8

Q ss_pred             CCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCC-CCCCCC--CCCCCceeCCC---CceecCCCCc----CCCCC
Q psy6687          17 MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGP-GPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQ----GTYCG   81 (116)
Q Consensus        17 ~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~-~~~~~~--~c~~~g~c~~~---~~c~C~~g~~----g~~c~   81 (116)
                      .|. .+|.++++|++   .|.|.|++||+|..|+..+ +.|...  +|.+  .|.+.   +.|.|++||.    |..|.
T Consensus        44 ~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           44 QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             -------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             cCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccC
Confidence            453 35888889975   5789999999999998655 555442  3443  66542   6899999999    77776

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.19  E-value=1.9e-06  Score=40.09  Aligned_cols=28  Identities=36%  Similarity=0.923  Sum_probs=17.7

Q ss_pred             CCCCCcEec--C---CCceeCCCCCcCCCCCCC
Q psy6687          88 QCLNNGTCT--A---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        88 ~c~~~g~c~--~---~~~C~C~~g~~g~~C~~~  115 (116)
                      +|.++|+|.  +   .+.|.|++||+|.+|+.+
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~   45 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR   45 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence            566666665  2   356777777777777643

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.11  E-value=4.5e-07  Score=46.53  Aligned_cols=43  Identities=35%  Similarity=0.833  Sum_probs=24.1

Q ss_pred             CceecCCCCc-----CCCCC-CCCCC-CC--CCCCcEecC---CCceeCCCCCcCC
Q psy6687          67 QMCQCPKGYQ-----GTYCG-TAMCF-PQ--CLNNGTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        67 ~~c~C~~g~~-----g~~c~-~~~c~-~~--c~~~g~c~~---~~~C~C~~g~~g~  110 (116)
                      +.|.|++||.     |..|. +++|. .+  |. +++|++   +|+|.|++||++.
T Consensus        25 y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A           25 FECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             EEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             EEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence            4666666665     44443 33443 22  44 356653   3677777777654

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.06  E-value=3.3e-06  Score=36.67  Aligned_cols=32  Identities=34%  Similarity=0.857  Sum_probs=17.3

Q ss_pred             CCCCCCCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          50 GPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        50 ~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      ++|...+|.++|.|.+.   +.|.|++||.|..|+
T Consensus         4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            33444555555555431   456666666666554

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=98.05  E-value=4.5e-06  Score=48.42  Aligned_cols=34  Identities=47%  Similarity=1.150  Sum_probs=16.2

Q ss_pred             CCCCCCCCCCCCCcEecCCCceeCCCCCccCCCC
Q psy6687          13 CGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE   46 (116)
Q Consensus        13 c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~   46 (116)
                      |....|...|.++|.|+....|.|++||.|..|+
T Consensus       146 C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          146 CQQAECPGGCRNGGFCNERRICECPDGFHGPHCE  179 (188)
T ss_dssp             ECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTC
T ss_pred             ccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCc
Confidence            3333444445555555444445555555555544

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.01  E-value=1.5e-06  Score=41.95  Aligned_cols=27  Identities=41%  Similarity=1.091  Sum_probs=15.0

Q ss_pred             CCCCCCcEecC--------CCceeCCCCCcCCCCC
Q psy6687          87 PQCLNNGTCTA--------PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        87 ~~c~~~g~c~~--------~~~C~C~~g~~g~~C~  113 (116)
                      .+|.++|+|..        .+.|.|++||+|.+|+
T Consensus        12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A           12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence            35555555542        2456666666666665

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.01  E-value=1.8e-07  Score=53.58  Aligned_cols=29  Identities=28%  Similarity=0.662  Sum_probs=20.9

Q ss_pred             CCCCC---CCCCCCcEecC---CCceeCCCCCcCCC
Q psy6687          82 TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLH  111 (116)
Q Consensus        82 ~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~  111 (116)
                      +++|.   .+|.+ ++|++   +|+|.|++||+|..
T Consensus       122 ideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A          122 IDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             CCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred             cccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence            44554   35865 68874   48999999998864

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.95  E-value=5.9e-08  Score=54.68  Aligned_cols=44  Identities=36%  Similarity=0.692  Sum_probs=33.2

Q ss_pred             CceecCCCCc---CCCCC-CCCCC---CCCCCCcEecC---CCceeCCCCCcCCC
Q psy6687          67 QMCQCPKGYQ---GTYCG-TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLH  111 (116)
Q Consensus        67 ~~c~C~~g~~---g~~c~-~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~  111 (116)
                      +.|.|++||.   |..|+ +++|.   .+|.+ ++|++   +|+|.|++||++..
T Consensus        88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence            5678999995   88886 55665   34875 58874   48999999998764

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.92  E-value=2e-06  Score=49.25  Aligned_cols=80  Identities=33%  Similarity=0.727  Sum_probs=49.3

Q ss_pred             c-cCCCCCcCCCCCC-------CCCC---------C-CCCCC------cEecC-CCcee-CCCCCccCCCCCC-------
Q psy6687           2 C-QCPKGYQGTYCGT-------AMCF---------P-QCLNN------GTCTA-PGVCS-CPPGFQGLHCEGG-------   48 (116)
Q Consensus         2 C-~C~~g~~g~~c~~-------~~c~---------~-~c~~~------g~C~~-~~~C~-c~~g~~g~~c~~~-------   48 (116)
                      | .|+.+|+|.+|+.       ..+.         . .|.++      +.|.. ++.|+ |.++|+|..|+.=       
T Consensus        20 C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~   99 (162)
T 1klo_A           20 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGN   99 (162)
T ss_dssp             ECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCEECTTEEEC
T ss_pred             eCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCcCchhhcCC
Confidence            5 6888999998874       0111         1 24443      45653 67894 9999999888620       


Q ss_pred             -C-----CCCCCCCCCCCc------eeCC-CCceecCCCCcCCCCC
Q psy6687          49 -P-----GPGCDQKCSNGG------WCDS-QQMCQCPKGYQGTYCG   81 (116)
Q Consensus        49 -~-----~~~~~~~c~~~g------~c~~-~~~c~C~~g~~g~~c~   81 (116)
                       .     ..|..-.|...|      .|.. +++|.|.++|.|..|+
T Consensus       100 ~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd  145 (162)
T 1klo_A          100 PLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG  145 (162)
T ss_dssp             TTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred             ccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence             0     111112344443      5654 3788899999888887

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.92  E-value=5.6e-06  Score=37.34  Aligned_cols=28  Identities=36%  Similarity=0.922  Sum_probs=18.6

Q ss_pred             CCCCCCcEecC-----CCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCTA-----PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~~-----~~~C~C~~g~~g~~C~~~  115 (116)
                      .+|.+ |+|..     .+.|.|++||+|.+|+.+
T Consensus        12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~   44 (46)
T 1k36_A           12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence            36666 67751     357777888888777754

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.89  E-value=6.1e-07  Score=41.65  Aligned_cols=14  Identities=50%  Similarity=1.265  Sum_probs=7.0

Q ss_pred             ceeCCCCCccCCCC
Q psy6687          33 VCSCPPGFQGLHCE   46 (116)
Q Consensus        33 ~C~c~~g~~g~~c~   46 (116)
                      .|.|+++|+|..|+
T Consensus        34 ~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A           34 SCECAIGFMGQRCE   47 (52)
T ss_dssp             EEECCTTEESTTSC
T ss_pred             EEECCCCCcCCCCc
Confidence            45555555555444

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.81  E-value=3.2e-06  Score=39.35  Aligned_cols=28  Identities=32%  Similarity=0.860  Sum_probs=18.7

Q ss_pred             CCCCCCcEec--C---CCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT--A---PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~--~---~~~C~C~~g~~g~~C~~  114 (116)
                      .+|.++|+|.  .   .+.|.|++||+|.+|+.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence            4566777775  2   25777777777777764

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.79  E-value=1.8e-05  Score=36.72  Aligned_cols=27  Identities=44%  Similarity=0.993  Sum_probs=17.2

Q ss_pred             CCCCCceeC--C---CCceecCCCCcCCCCCC
Q psy6687          56 KCSNGGWCD--S---QQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        56 ~c~~~g~c~--~---~~~c~C~~g~~g~~c~~   82 (116)
                      +|.++|+|.  .   .+.|.|++||+|..|+.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            566666665  2   24677777777777764

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.76  E-value=6.6e-06  Score=42.20  Aligned_cols=45  Identities=29%  Similarity=0.767  Sum_probs=32.1

Q ss_pred             CceecCCCCc----CCCCC-CCCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687          67 QMCQCPKGYQ----GTYCG-TAMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        67 ~~c~C~~g~~----g~~c~-~~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~  114 (116)
                      +.|.|++||.    |..|+ +++|. .+|.  ++|++   +|+|.|+ ++.|..++.
T Consensus        25 y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~~   78 (87)
T 1z6c_A           25 FECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLAQ   78 (87)
T ss_dssp             CCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCCT
T ss_pred             EEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcccC
Confidence            7899999998    66775 44554 5676  57875   4899997 666655543

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.74  E-value=4.4e-06  Score=44.57  Aligned_cols=68  Identities=26%  Similarity=0.495  Sum_probs=24.9

Q ss_pred             CCCCccCCCCCCCCCCCCC--CCCCCceeCC---CCceecCCCCcC---CCCC-CCCCC--CCCCCCcEecC---CCcee
Q psy6687          37 PPGFQGLHCEGGPGPGCDQ--KCSNGGWCDS---QQMCQCPKGYQG---TYCG-TAMCF--PQCLNNGTCTA---PGVCS  102 (116)
Q Consensus        37 ~~g~~g~~c~~~~~~~~~~--~c~~~g~c~~---~~~c~C~~g~~g---~~c~-~~~c~--~~c~~~g~c~~---~~~C~  102 (116)
                      ..+|.+..|+  +++|...  .|.  ..|.+   .+.|.|++||.+   ..|+ +++|.  .+|.  ++|++   +|.|.
T Consensus        19 ~~~~~~~~Cd--~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~   92 (107)
T 2w2n_E           19 ENLYFQGAMG--TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ   92 (107)
T ss_dssp             -CCCCSCCBS--CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC--------------------------
T ss_pred             CCCcCCCCCc--CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEE
Confidence            4567777774  3444321  232  25654   379999999987   6675 45665  4564  57764   48999


Q ss_pred             CCCCCcCC
Q psy6687         103 CPPGFQGL  110 (116)
Q Consensus       103 C~~g~~g~  110 (116)
                      |++||.+.
T Consensus        93 C~~Gy~~~  100 (107)
T 2w2n_E           93 CEEGFQLD  100 (107)
T ss_dssp             --------
T ss_pred             CCCCceEC
Confidence            99999865

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.66  E-value=2e-05  Score=51.42  Aligned_cols=81  Identities=23%  Similarity=0.542  Sum_probs=17.7

Q ss_pred             CceeCCCCCccCCCCCCCCCCCCCCCCCCceeC----CCCcee-cCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCC
Q psy6687          32 GVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCD----SQQMCQ-CPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPG  106 (116)
Q Consensus        32 ~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~----~~~~c~-C~~g~~g~~c~~~~c~~~c~~~g~c~~~~~C~C~~g  106 (116)
                      +.|.|..++.|..|+.-...-...++..+..+.    ....|. |.-++.|..|+...  .+|.++++|....+|.|++|
T Consensus       313 ~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t--~~C~ngg~C~~~~~C~C~~G  390 (426)
T 3zyj_B          313 LTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL--LHCQNGGTCHNNVRCLCPAA  390 (426)
T ss_dssp             EEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred             ceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc--ccCCCCCCcCCCCCCcCCCC
Confidence            478888888888887321111111222221110    012332 33334455665321  46777777775557788888


Q ss_pred             CcCCCCCC
Q psy6687         107 FQGLHCEG  114 (116)
Q Consensus       107 ~~g~~C~~  114 (116)
                      |+|..|+.
T Consensus       391 ~~G~~Ce~  398 (426)
T 3zyj_B          391 YTGILCEK  398 (426)
T ss_dssp             --------
T ss_pred             CcCCCCcC
Confidence            88877753

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.66  E-value=3.3e-05  Score=34.55  Aligned_cols=27  Identities=41%  Similarity=0.849  Sum_probs=18.8

Q ss_pred             CCCCCceeC--C---CCceecCCCCcCCCCCC
Q psy6687          56 KCSNGGWCD--S---QQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        56 ~c~~~g~c~--~---~~~c~C~~g~~g~~c~~   82 (116)
                      +|.++|+|.  .   .+.|.|++||+|..|+.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence            677777775  2   25788888888877764

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.63  E-value=2.8e-05  Score=37.40  Aligned_cols=32  Identities=34%  Similarity=0.844  Sum_probs=23.8

Q ss_pred             CCCCCcEecC--------CCceeCCCCCccCCCCCCCCCC
Q psy6687          21 QCLNNGTCTA--------PGVCSCPPGFQGLHCEGGPGPG   52 (116)
Q Consensus        21 ~c~~~g~C~~--------~~~C~c~~g~~g~~c~~~~~~~   52 (116)
                      +|.++|+|+.        .+.|.|++||+|..|+..++.+
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~   52 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK   52 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSS
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcc
Confidence            5888888862        4678888888888887555444

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.56  E-value=3.6e-05  Score=34.64  Aligned_cols=16  Identities=38%  Similarity=1.090  Sum_probs=9.0

Q ss_pred             CceecCCCCcCCCCCC
Q psy6687          67 QMCQCPKGYQGTYCGT   82 (116)
Q Consensus        67 ~~c~C~~g~~g~~c~~   82 (116)
                      +.|.|++||+|.+|+.
T Consensus        28 ~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           28 NYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             EEEEECTTCSSTTSCC
T ss_pred             EEEECCCCCccCCCCc
Confidence            4556666666655553

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.55  E-value=3.3e-06  Score=43.22  Aligned_cols=54  Identities=30%  Similarity=0.727  Sum_probs=38.7

Q ss_pred             CCCCcEecC---CCceeCCCCCc-----cCCCCCCCCCCCCCC--CCCCceeCCC---CceecCCCCcCC
Q psy6687          22 CLNNGTCTA---PGVCSCPPGFQ-----GLHCEGGPGPGCDQK--CSNGGWCDSQ---QMCQCPKGYQGT   78 (116)
Q Consensus        22 c~~~g~C~~---~~~C~c~~g~~-----g~~c~~~~~~~~~~~--c~~~g~c~~~---~~c~C~~g~~g~   78 (116)
                      |.+ ++|++   .|.|.|++||.     |..|+ ++++|...+  |. ++.|.+.   +.|.|++||.+.
T Consensus        13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A           13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             TTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             CCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence            643 57865   47899999998     66675 566665444  54 4688653   789999999865

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.47  E-value=4.6e-05  Score=49.76  Aligned_cols=94  Identities=28%  Similarity=0.689  Sum_probs=17.6

Q ss_pred             ccCCCCCcCCCCCCCCCCC-----CCCCCcEe-c---CCCcee-CCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceec
Q psy6687           2 CQCPKGYQGTYCGTAMCFP-----QCLNNGTC-T---APGVCS-CPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQC   71 (116)
Q Consensus         2 C~C~~g~~g~~c~~~~c~~-----~c~~~g~C-~---~~~~C~-c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C   71 (116)
                      |.|..++.|..|+.  |..     ++..+..+ +   ..+.|. |.-.+.|..|+...     .+|.++|.|....+|.|
T Consensus       315 C~C~~~ttG~~CE~--C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~C~~~~~C~C  387 (426)
T 3zyj_B          315 CECEHNTTGPDCGK--CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LHCQNGGTCHNNVRCLC  387 (426)
T ss_dssp             ECCCTTEESSSSCE--ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred             eeCCCCCcCCCccc--cccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----ccCCCCCCcCCCCCCcC
Confidence            78889999999874  322     23222111 0   123443 33344567776432     47888888877568999


Q ss_pred             CCCCcCCCCCCCCCCCCCCCCcEecC-CCceeCCCC
Q psy6687          72 PKGYQGTYCGTAMCFPQCLNNGTCTA-PGVCSCPPG  106 (116)
Q Consensus        72 ~~g~~g~~c~~~~c~~~c~~~g~c~~-~~~C~C~~g  106 (116)
                      ++||.|..|+..    .|.++|+|.. +++|.-+.|
T Consensus       388 ~~G~~G~~Ce~c----~C~~~g~C~~~~Gqc~~~~~  419 (426)
T 3zyj_B          388 PAAYTGILCEKL----RCEEAGSCGSDSGQGAPPHG  419 (426)
T ss_dssp             ------------------------------------
T ss_pred             CCCCcCCCCcCC----CCCCCCcccCCCCccCCCCC
Confidence            999999999864    4556777763 356655444

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.37  E-value=4.9e-05  Score=36.29  Aligned_cols=27  Identities=30%  Similarity=0.763  Sum_probs=14.6

Q ss_pred             CCCCCC--cEecC---CCceeCCCCCc-CCCCC
Q psy6687          87 PQCLNN--GTCTA---PGVCSCPPGFQ-GLHCE  113 (116)
Q Consensus        87 ~~c~~~--g~c~~---~~~C~C~~g~~-g~~C~  113 (116)
                      .||.++  |+|++   .|.|.|++||+ |.+|+
T Consensus        17 nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           17 NPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             CSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            455555  55542   24566666666 65554

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=97.37  E-value=2.2e-05  Score=54.15  Aligned_cols=45  Identities=22%  Similarity=0.564  Sum_probs=39.7

Q ss_pred             cCCCCCcCCCCC-CCCCCCCCCCCcEecCCCceeCCCCCccCCCCCC
Q psy6687           3 QCPKGYQGTYCG-TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG   48 (116)
Q Consensus         3 ~C~~g~~g~~c~-~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~   48 (116)
                      .|.++|.|++|. ...|...|.++|+|+. +.|.|.+||.|..|...
T Consensus       521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~~  566 (725)
T 2e26_A          521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEP  566 (725)
T ss_dssp             CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCEE
T ss_pred             ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCcc
Confidence            588999999998 4678888999999996 89999999999999743

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=97.37  E-value=5.4e-05  Score=35.77  Aligned_cols=27  Identities=41%  Similarity=0.893  Sum_probs=21.6

Q ss_pred             CCCCCcEec-----C--CCceeCCCCCcCCCCCC
Q psy6687          88 QCLNNGTCT-----A--PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        88 ~c~~~g~c~-----~--~~~C~C~~g~~g~~C~~  114 (116)
                      +|.++|+|.     .  .+.|.|++||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            788888886     1  25799999999999974

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.16  E-value=0.00024  Score=46.09  Aligned_cols=52  Identities=35%  Similarity=0.717  Sum_probs=35.2

Q ss_pred             CCcEecC---CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCCC---CceecCCCCcCC
Q psy6687          24 NNGTCTA---PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDSQ---QMCQCPKGYQGT   78 (116)
Q Consensus        24 ~~g~C~~---~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~~---~~c~C~~g~~g~   78 (116)
                      ....|.+   .|.|.|++||.   |..|+ ++++|.. .+|..  .|.+.   +.|.|.+||.+.
T Consensus        10 c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L           10 CSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             CSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred             CCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence            3457865   57899999997   67775 6666652 34543  55542   688888888754

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.08  E-value=0.00012  Score=33.91  Aligned_cols=28  Identities=32%  Similarity=0.860  Sum_probs=20.7

Q ss_pred             CCCCCCcEec--C---CCceeCCCCCccCCCCC
Q psy6687          20 PQCLNNGTCT--A---PGVCSCPPGFQGLHCEG   47 (116)
Q Consensus        20 ~~c~~~g~C~--~---~~~C~c~~g~~g~~c~~   47 (116)
                      .+|.++|+|.  .   .+.|.|++||+|..|+.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence            3577888885  2   36788888888888874

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=97.05  E-value=6.5e-05  Score=51.86  Aligned_cols=43  Identities=23%  Similarity=0.609  Sum_probs=34.9

Q ss_pred             ecCCCCcCCCCC-CCCCCCCCCCCcEecCCCceeCCCCCcCCCCC
Q psy6687          70 QCPKGYQGTYCG-TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE  113 (116)
Q Consensus        70 ~C~~g~~g~~c~-~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~  113 (116)
                      .|.++|.|..|. ...|+..|..+|.|+. ++|.|.+||.|..|.
T Consensus       521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~  564 (725)
T 2e26_A          521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCD  564 (725)
T ss_dssp             CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSC
T ss_pred             ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcC
Confidence            578888888888 3677778888888886 788888888888886

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.01  E-value=5e-05  Score=36.28  Aligned_cols=32  Identities=22%  Similarity=0.625  Sum_probs=17.1

Q ss_pred             CCCCCCCCCCC--ceeCCC---CceecCCCCc-CCCCC
Q psy6687          50 GPGCDQKCSNG--GWCDSQ---QMCQCPKGYQ-GTYCG   81 (116)
Q Consensus        50 ~~~~~~~c~~~--g~c~~~---~~c~C~~g~~-g~~c~   81 (116)
                      ++|...||.++  |+|.+.   +.|.|++||. |..|+
T Consensus        12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            33444455555  555432   4566666666 66554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=96.95  E-value=0.00018  Score=46.42  Aligned_cols=47  Identities=30%  Similarity=0.866  Sum_probs=11.1

Q ss_pred             EecC---CCceeCCCCCc----cCCCCCCCCCCC-CCCCCCCceeCCC---CceecCCCCc
Q psy6687          27 TCTA---PGVCSCPPGFQ----GLHCEGGPGPGC-DQKCSNGGWCDSQ---QMCQCPKGYQ   76 (116)
Q Consensus        27 ~C~~---~~~C~c~~g~~----g~~c~~~~~~~~-~~~c~~~g~c~~~---~~c~C~~g~~   76 (116)
                      .|.+   .|.|.|++||.    |..|+ ++++|. ..+|.+.  |.+.   +.|.|.+||.
T Consensus        16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~   73 (386)
T 3v65_B           16 KCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQG--CTNSEGAFQCWCEAGYE   73 (386)
T ss_dssp             -------------------------------------CCTTE--EC-----CCEECCTTEE
T ss_pred             CCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccCc--CCCCCCCCeEEECCCce
Confidence            5653   36788888887    77774 566664 3456542  6542   6788888775

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.92  E-value=0.011  Score=41.22  Aligned_cols=41  Identities=34%  Similarity=0.799  Sum_probs=30.3

Q ss_pred             CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687          67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      +.|.|++||.   +..|+ +++|.  .+|.  ..|.+   +|.|.|++||++
T Consensus       315 ~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          315 YECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             CCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred             cEEeCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence            7899999998   66776 56665  3454  25553   489999999975

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.82  E-value=0.00012  Score=41.60  Aligned_cols=33  Identities=42%  Similarity=0.853  Sum_probs=25.0

Q ss_pred             CCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          83 AMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        83 ~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      ..|. .+|.++++|++   .++|.|++||.|..||.+
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence            3444 46777888874   478999999999999854

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=96.79  E-value=0.0012  Score=30.13  Aligned_cols=27  Identities=33%  Similarity=0.924  Sum_probs=18.7

Q ss_pred             CCCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|.++ +|.     +...|.|++||+|++|+.
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence            345554 664     236888899999988874

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.73  E-value=0.00055  Score=32.26  Aligned_cols=27  Identities=41%  Similarity=0.893  Sum_probs=20.3

Q ss_pred             CCCCCcEec-----C--CCceeCCCCCccCCCCC
Q psy6687          21 QCLNNGTCT-----A--PGVCSCPPGFQGLHCEG   47 (116)
Q Consensus        21 ~c~~~g~C~-----~--~~~C~c~~g~~g~~c~~   47 (116)
                      +|.++|+|.     .  .+.|.|++||+|..|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            577888886     2  35788888888888873

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.58  E-value=0.0016  Score=42.30  Aligned_cols=41  Identities=34%  Similarity=0.813  Sum_probs=23.7

Q ss_pred             CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687          67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      +.|.|++||.   |..|+ +++|.  .+|.+  .|.+   +|.|.|.+||.+
T Consensus        21 y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~   70 (400)
T 3p5b_L           21 YECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQL   70 (400)
T ss_dssp             EEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred             eEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeeccccccc
Confidence            5677777776   55564 44554  34543  4543   367777777754

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=96.57  E-value=0.00048  Score=31.45  Aligned_cols=26  Identities=35%  Similarity=1.013  Sum_probs=17.5

Q ss_pred             CCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687          88 QCLNNGTCT-----APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        88 ~c~~~g~c~-----~~~~C~C~~g~~g~~C~~  114 (116)
                      .|.+ |+|.     ....|.|++||+|.+|+.
T Consensus        15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             SCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             cccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            4555 5663     125688888888888874

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=96.50  E-value=0.00093  Score=41.46  Aligned_cols=55  Identities=33%  Similarity=0.849  Sum_probs=41.2

Q ss_pred             CCCCceeCCCCceecCCCCcCCCCCC--C---------CCC-----CCCCCCcEecCCCceeCCCCC------cCCCCC
Q psy6687          57 CSNGGWCDSQQMCQCPKGYQGTYCGT--A---------MCF-----PQCLNNGTCTAPGVCSCPPGF------QGLHCE  113 (116)
Q Consensus        57 c~~~g~c~~~~~c~C~~g~~g~~c~~--~---------~c~-----~~c~~~g~c~~~~~C~C~~g~------~g~~C~  113 (116)
                      |..+|.+.- +.|.|.+||.|..|+-  .         .|.     ..|+++|.|+- ++|.|...+      .|.+|+
T Consensus       198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~~~~~G~~~~  274 (280)
T 2p26_A          198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCE  274 (280)
T ss_dssp             GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTTCEEESTTSC
T ss_pred             cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCCeeEeeEecc
Confidence            666777765 7899999999999971  1         464     14888899986 899996664      566665

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.44  E-value=0.00015  Score=41.30  Aligned_cols=81  Identities=27%  Similarity=0.653  Sum_probs=46.9

Q ss_pred             CCCCCCcEecC---CCceeCCCCCc----cCCCCCCCCC--CCCC--CC--CCCceeCC-------CCceecCCCCc-CC
Q psy6687          20 PQCLNNGTCTA---PGVCSCPPGFQ----GLHCEGGPGP--GCDQ--KC--SNGGWCDS-------QQMCQCPKGYQ-GT   78 (116)
Q Consensus        20 ~~c~~~g~C~~---~~~C~c~~g~~----g~~c~~~~~~--~~~~--~c--~~~g~c~~-------~~~c~C~~g~~-g~   78 (116)
                      .+|. +++|++   .|+|.|++||.    |..|+ ++++  |...  ++  ..++.|.+       .+.|.|++||. +.
T Consensus        10 ~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~   87 (162)
T 1uzk_A           10 TTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT   87 (162)
T ss_dssp             TSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETT
T ss_pred             CCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC
Confidence            3575 589976   58999999998    77887 4433  3221  12  12445543       26788999986 33


Q ss_pred             CCCCCCCCCCCCCCcEecCCCceeCCC--CCcCC
Q psy6687          79 YCGTAMCFPQCLNNGTCTAPGVCSCPP--GFQGL  110 (116)
Q Consensus        79 ~c~~~~c~~~c~~~g~c~~~~~C~C~~--g~~g~  110 (116)
                      .|+      .|....  ...++|.|++  ||++.
T Consensus        88 ~C~------~C~~~~--~~~y~C~C~~g~G~~~~  113 (162)
T 1uzk_A           88 PCE------MCPAVN--TSEYKILCPGGEGFRPN  113 (162)
T ss_dssp             TTE------ECCCTT--SHHHHHHCTTCTTEEEC
T ss_pred             Ccc------cCCCCC--CCCceeECCCCCCcccC
Confidence            332      232211  0137899987  88875

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=96.40  E-value=0.0016  Score=40.45  Aligned_cols=52  Identities=29%  Similarity=0.649  Sum_probs=38.3

Q ss_pred             CCCCcEecCCCceeCCCCCccCCCCCCCC---------CCCC----CCCCCCceeCCCCceecCCCC
Q psy6687          22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPG---------PGCD----QKCSNGGWCDSQQMCQCPKGY   75 (116)
Q Consensus        22 c~~~g~C~~~~~C~c~~g~~g~~c~~~~~---------~~~~----~~c~~~g~c~~~~~c~C~~g~   75 (116)
                      |.++|.+.. +.|.|.+||.|..|+-...         .|..    ..|+.+|.|.- +.|.|..++
T Consensus       198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~  262 (280)
T 2p26_A          198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD  262 (280)
T ss_dssp             GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCS
T ss_pred             cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCC
Confidence            777788875 7999999999999972211         3432    14788888887 799997765

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=96.37  E-value=0.00014  Score=40.78  Aligned_cols=46  Identities=30%  Similarity=0.556  Sum_probs=34.8

Q ss_pred             CceeCCCCCc---cCCCCCCCCCCCCC--CCCCCceeCCC---CceecCCCCcCCC
Q psy6687          32 GVCSCPPGFQ---GLHCEGGPGPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQGTY   79 (116)
Q Consensus        32 ~~C~c~~g~~---g~~c~~~~~~~~~~--~c~~~g~c~~~---~~c~C~~g~~g~~   79 (116)
                      +.|.|++||.   |..|+ ++++|...  +|.+ +.|++.   ++|.|++||.+..
T Consensus        88 ~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence            5778999995   88887 67777543  4875 588753   7899999998764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.34  E-value=0.0033  Score=34.19  Aligned_cols=56  Identities=32%  Similarity=0.636  Sum_probs=37.6

Q ss_pred             CCCCCcEecC-----CC-ceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCCC
Q psy6687          21 QCLNNGTCTA-----PG-VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        21 ~c~~~g~C~~-----~~-~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~~   82 (116)
                      +|+++|+|.+     .+ .|.|+++|+|..|+.++.    ..|..+ .- ..++..+...+.|..|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-~G-~~YrG~~~~t~sG~~Cq~   63 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-NG-HFYRGKASTDTMGRPCLP   63 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-SC-TTCCSCCCBBTTSCBBCC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-cc-ccceeeccccccCCcccC
Confidence            5888999964     24 799999999999985542    133221 00 126677777778888874

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.30  E-value=0.0038  Score=33.90  Aligned_cols=41  Identities=24%  Similarity=0.542  Sum_probs=23.6

Q ss_pred             ccCCCCCcCCCCCCCCCCCCCCCC-cEecCCCceeCCCCCccCCCC
Q psy6687           2 CQCPKGYQGTYCGTAMCFPQCLNN-GTCTAPGVCSCPPGFQGLHCE   46 (116)
Q Consensus         2 C~C~~g~~g~~c~~~~c~~~c~~~-g~C~~~~~C~c~~g~~g~~c~   46 (116)
                      |.|+++|+|..|+.+.. ..|... |   ..|++.+...+.|..|+
T Consensus        21 C~Cp~g~~G~~Ce~~~~-~~C~~g~G---~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A           21 CNCPKKFGGQHCEIDKS-KTCYEGNG---HFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             EECCTTEESTTSCEESS-CCSBCSSC---TTCCSCCCBBTTSCBBC
T ss_pred             ccCCCCCCCccccccCc-CCCccccc---ccceeeccccccCCccc
Confidence            66777777777765321 123221 1   13666666667777775

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=96.22  E-value=0.0015  Score=32.67  Aligned_cols=28  Identities=32%  Similarity=0.955  Sum_probs=19.7

Q ss_pred             CCCCCCcEec-----CCCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~~  115 (116)
                      ..|.++ +|.     ....|.|++||+|.+|+..
T Consensus        46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~l   78 (79)
T 1xdt_R           46 DFCIHG-ECKYVKELRAPSCICHPGYHGERCHGL   78 (79)
T ss_dssp             TCCSSE-EECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred             CcCCCC-EeeeecCCCCeEEEcCCCccccccccc
Confidence            456654 673     2367899999999998854

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=96.15  E-value=0.0043  Score=28.24  Aligned_cols=27  Identities=26%  Similarity=0.812  Sum_probs=18.7

Q ss_pred             CCCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|.+ |+|.     +...|.|++||+|.+|+.
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            35655 4775     124688899999998875

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=96.13  E-value=0.00035  Score=39.40  Aligned_cols=30  Identities=40%  Similarity=0.988  Sum_probs=24.7

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGT  116 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~~  116 (116)
                      .+|.+++.|.+   .+.|.|.+||+|..||++|
T Consensus       125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~  157 (157)
T 1g1t_A          125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQIV  157 (157)
T ss_dssp             TGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence            46777788863   4799999999999999765

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=95.88  E-value=0.0032  Score=35.31  Aligned_cols=51  Identities=31%  Similarity=0.605  Sum_probs=33.5

Q ss_pred             CCCCCceeCCC-----C-ceecCCCCcCCCCCCCCCCCCCCCCcEecC----CCceeCCCCCcCCCCC
Q psy6687          56 KCSNGGWCDSQ-----Q-MCQCPKGYQGTYCGTAMCFPQCLNNGTCTA----PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        56 ~c~~~g~c~~~-----~-~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~----~~~C~C~~g~~g~~C~  113 (116)
                      +|.++|+|...     + .|.|+++|.|.+|+++   ..    ..|..    .|+........|..|+
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~---~~----~~C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID---KS----KTCYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE---SS----CCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceecc---cc----ccCCCCCccccccceecCCcCCccc
Confidence            78999999542     3 6999999999999865   12    23442    2444444455666664

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=95.75  E-value=0.0033  Score=35.65  Aligned_cols=29  Identities=28%  Similarity=0.700  Sum_probs=23.0

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      .+|..+++|..   .+.|.|.+||.|..|+..
T Consensus       125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~  156 (164)
T 3cfw_A          125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFV  156 (164)
T ss_dssp             TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred             CcCCCCCeecccCCCceeeeCCCccccccccc
Confidence            56777888873   378999999999999854

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.72  E-value=0.0033  Score=40.52  Aligned_cols=40  Identities=33%  Similarity=0.859  Sum_probs=8.5

Q ss_pred             CceecCCCCc----CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCc
Q psy6687          67 QMCQCPKGYQ----GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQ  108 (116)
Q Consensus        67 ~~c~C~~g~~----g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~  108 (116)
                      +.|.|++||.    |..|. +++|.  .+|.+  .|.+   ++.|.|++||.
T Consensus        24 ~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~   73 (386)
T 3v65_B           24 VQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE   73 (386)
T ss_dssp             ----------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred             cEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence            4555666655    45553 33443  34443  1442   25566666654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.57  E-value=0.0079  Score=42.53  Aligned_cols=41  Identities=34%  Similarity=0.799  Sum_probs=29.4

Q ss_pred             CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687          67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      +.|.|++||.   |..|+ +++|.  .+|.  ..|.+   +|.|.|++||..
T Consensus       333 y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          333 YECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             EEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred             cccCCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence            6899999995   67775 56665  2343  35553   489999999964

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=95.55  E-value=0.039  Score=38.46  Aligned_cols=44  Identities=36%  Similarity=0.727  Sum_probs=32.0

Q ss_pred             CCceeCCCCCc---cCCCCCCCCCCC-CCCCCCCceeCC---CCceecCCCCcC
Q psy6687          31 PGVCSCPPGFQ---GLHCEGGPGPGC-DQKCSNGGWCDS---QQMCQCPKGYQG   77 (116)
Q Consensus        31 ~~~C~c~~g~~---g~~c~~~~~~~~-~~~c~~~g~c~~---~~~c~C~~g~~g   77 (116)
                      .|.|.|++||.   |..|+ ++++|. ..+|.  ..|.+   .+.|.|++||.+
T Consensus       314 ~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          314 GYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             CCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred             CcEEeCCCCeEcCCCCccc-CccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence            58999999998   77787 666665 23453  24554   278999999975

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.39  E-value=0.0035  Score=35.44  Aligned_cols=33  Identities=30%  Similarity=0.641  Sum_probs=25.9

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~~   83 (116)
                      .+...+|.+++.|.+.   ++|.|++||.|..|+..
T Consensus       121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             CCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence            3455678888888753   68999999999999853

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.02  E-value=0.011  Score=40.47  Aligned_cols=32  Identities=44%  Similarity=1.008  Sum_probs=17.5

Q ss_pred             CCCCCCCCCCceeCC----CCceecC-CCCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDS----QQMCQCP-KGYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~----~~~c~C~-~g~~g~~c~~   82 (116)
                      +|...||.++|.|..    .+.|.|+ +||.|..|+.
T Consensus         3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            344455666666552    2456666 6666666653

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=94.72  E-value=0.0085  Score=40.72  Aligned_cols=30  Identities=33%  Similarity=0.890  Sum_probs=15.7

Q ss_pred             CCCCCCCCCceeCC-C---CceecC-CCCcCCCCC
Q psy6687          52 GCDQKCSNGGWCDS-Q---QMCQCP-KGYQGTYCG   81 (116)
Q Consensus        52 ~~~~~c~~~g~c~~-~---~~c~C~-~g~~g~~c~   81 (116)
                      |...||.++|.|.. .   +.|.|+ +||.|..|+
T Consensus         5 C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             GGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence            34445555555543 1   455555 555555555

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=93.97  E-value=0.061  Score=38.16  Aligned_cols=48  Identities=38%  Similarity=0.785  Sum_probs=32.9

Q ss_pred             EecC---CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCC---CCceecCCCCcC
Q psy6687          27 TCTA---PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDS---QQMCQCPKGYQG   77 (116)
Q Consensus        27 ~C~~---~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~---~~~c~C~~g~~g   77 (116)
                      .|.+   .|.|.|++||.   |..|+ ++++|.. .+|.  ..|.+   .+.|.|.+||..
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred             cccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence            5654   57899999995   77776 5666642 2343  24554   278999999964

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=93.53  E-value=0.038  Score=37.90  Aligned_cols=28  Identities=36%  Similarity=0.909  Sum_probs=24.1

Q ss_pred             CCCCCCcEecC----CCceeCC-CCCccCCCCC
Q psy6687          20 PQCLNNGTCTA----PGVCSCP-PGFQGLHCEG   47 (116)
Q Consensus        20 ~~c~~~g~C~~----~~~C~c~-~g~~g~~c~~   47 (116)
                      .+|.++|+|.+    .|.|.|+ +||+|..|+.
T Consensus         7 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            36999999983    5789999 9999999984

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=92.83  E-value=0.011  Score=33.20  Aligned_cols=30  Identities=30%  Similarity=0.800  Sum_probs=23.3

Q ss_pred             CCCCCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687          54 DQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        54 ~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~~   83 (116)
                      ..+|.+++.|...   +.|.|.++|.|++|++.
T Consensus       124 ~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~  156 (157)
T 1g1t_A          124 NTSCSGHGECVETINNYTCKCDPGFSGLKCEQI  156 (157)
T ss_dssp             TTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence            3567777888653   68999999999999853

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.17  E-value=0.047  Score=37.16  Aligned_cols=28  Identities=29%  Similarity=0.797  Sum_probs=24.3

Q ss_pred             CCCCCCcEecC----CCceeCC-CCCccCCCCC
Q psy6687          20 PQCLNNGTCTA----PGVCSCP-PGFQGLHCEG   47 (116)
Q Consensus        20 ~~c~~~g~C~~----~~~C~c~-~g~~g~~c~~   47 (116)
                      .+|.++|+|.+    .|.|.|+ +||+|..|+.
T Consensus         8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             CCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence            36999999976    4799999 9999999984

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=91.55  E-value=0.12  Score=28.97  Aligned_cols=29  Identities=48%  Similarity=1.047  Sum_probs=23.7

Q ss_pred             CCCCCcEecC-----CC-ceeCCCCCccCCCCCCC
Q psy6687          21 QCLNNGTCTA-----PG-VCSCPPGFQGLHCEGGP   49 (116)
Q Consensus        21 ~c~~~g~C~~-----~~-~C~c~~g~~g~~c~~~~   49 (116)
                      +|+++|+|+.     .+ .|.|+++|.|..|+.+.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~   48 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK   48 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence            6999999964     23 79999999999998544

>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}

Probab=91.20  E-value=0.12  Score=34.96  Aligned_cols=27  Identities=30%  Similarity=0.754  Sum_probs=24.0

Q ss_pred             CCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687          88 QCLNNGTCTAPGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        88 ~c~~~g~c~~~~~C~C~~g~~g~~C~~  114 (116)
                      .|..+|.|.+...|.|.+||.+++|+.
T Consensus       455 ~C~~~GVCNn~~~CHC~~GwaPP~C~~  481 (510)
T 3g5c_A          455 ICSGNGVCSNELKCVCNRHWIGSDCNT  481 (510)
T ss_dssp             SGGGTEEEBTTSCEEECTTEESTTSCE
T ss_pred             ccCCCCeeCCCCCcCCCCCCCCCCCCC
Confidence            588899999878999999999999974

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=89.78  E-value=0.22  Score=32.44  Aligned_cols=31  Identities=32%  Similarity=0.801  Sum_probs=24.7

Q ss_pred             CCC-CCCCCCcEecC---CCceeCCC-CCcCCCCCC
Q psy6687          84 MCF-PQCLNNGTCTA---PGVCSCPP-GFQGLHCEG  114 (116)
Q Consensus        84 ~c~-~~c~~~g~c~~---~~~C~C~~-g~~g~~C~~  114 (116)
                      .|. .+|.++|+|..   .+.|.|+. +|.|+.|+.
T Consensus       187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred             CcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence            344 68999999984   47899995 999999974

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=89.73  E-value=0.24  Score=36.92  Aligned_cols=32  Identities=31%  Similarity=0.785  Sum_probs=24.1

Q ss_pred             CCC-CCCCCCcEecC---CCceeCC-CCCcCCCCCCC
Q psy6687          84 MCF-PQCLNNGTCTA---PGVCSCP-PGFQGLHCEGG  115 (116)
Q Consensus        84 ~c~-~~c~~~g~c~~---~~~C~C~-~g~~g~~C~~~  115 (116)
                      .|. .+|.++|+|..   .+.|.|+ ++|.|+.|+.+
T Consensus      1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A         1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp             CCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred             ceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence            344 57888888873   3789998 59999998753

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=89.68  E-value=0.21  Score=32.45  Aligned_cols=38  Identities=34%  Similarity=0.815  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCCCCCceeCCC---CceecCC-CCcCCCCCC
Q psy6687          45 CEGGPGPGCDQKCSNGGWCDSQ---QMCQCPK-GYQGTYCGT   82 (116)
Q Consensus        45 c~~~~~~~~~~~c~~~g~c~~~---~~c~C~~-g~~g~~c~~   82 (116)
                      |....+.|...+|.++|.|...   +.|.|+. +|.|+.|+.
T Consensus       181 C~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             CCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred             CCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence            4433456667789999999753   6899985 899999974

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=88.96  E-value=0.11  Score=33.76  Aligned_cols=16  Identities=31%  Similarity=0.806  Sum_probs=12.7

Q ss_pred             CceeCCCCCccCCCCC
Q psy6687          32 GVCSCPPGFQGLHCEG   47 (116)
Q Consensus        32 ~~C~c~~g~~g~~c~~   47 (116)
                      +.|.|..+|.|..|+.
T Consensus       272 ~~C~C~~nt~G~~Ce~  287 (375)
T 4aqt_A          272 LMCNCKHNTYGVDCEK  287 (375)
T ss_dssp             EEECCCTTEESTTSCE
T ss_pred             eeeeCcCCCcCCCccc
Confidence            4678888999988873

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=86.80  E-value=1  Score=29.58  Aligned_cols=14  Identities=29%  Similarity=0.793  Sum_probs=9.7

Q ss_pred             ceeCCCCCccCCCC
Q psy6687          33 VCSCPPGFQGLHCE   46 (116)
Q Consensus        33 ~C~c~~g~~g~~c~   46 (116)
                      .|.|..++.|..|+
T Consensus       287 ~C~C~hnT~G~~CE  300 (403)
T 2y38_A          287 QCACQHNTCGGSCD  300 (403)
T ss_dssp             EECCCTTEESSSCC
T ss_pred             EeECcCcCcCCCCC
Confidence            46777777777776

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=85.76  E-value=0.1  Score=33.91  Aligned_cols=27  Identities=33%  Similarity=0.901  Sum_probs=23.4

Q ss_pred             CCCCCCCCCcEecCCCceeCCCCCcCCC
Q psy6687          84 MCFPQCLNNGTCTAPGVCSCPPGFQGLH  111 (116)
Q Consensus        84 ~c~~~c~~~g~c~~~~~C~C~~g~~g~~  111 (116)
                      .|++.|.++|.|.. +.|.|.+||.|..
T Consensus       193 ~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d  219 (387)
T 2ddu_A          193 PCPSYCSGHGDCIS-GVCFCDLGYTAAQ  219 (387)
T ss_dssp             CCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred             cCccccCCCceecC-CeEEecCCcccCC
Confidence            47778999999986 8999999999874

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=84.73  E-value=0.56  Score=35.06  Aligned_cols=39  Identities=33%  Similarity=0.809  Sum_probs=28.7

Q ss_pred             CCCCCCCCCCCCCCCCceeCCC---CceecC-CCCcCCCCCCC
Q psy6687          45 CEGGPGPGCDQKCSNGGWCDSQ---QMCQCP-KGYQGTYCGTA   83 (116)
Q Consensus        45 c~~~~~~~~~~~c~~~g~c~~~---~~c~C~-~g~~g~~c~~~   83 (116)
                      |....+.|...+|.++|.|...   +.|.|+ ++|.|+.|+..
T Consensus      1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A         1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp             SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred             eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence            4433456667789999999642   689999 59999999753

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=81.44  E-value=0.33  Score=31.57  Aligned_cols=27  Identities=33%  Similarity=0.901  Sum_probs=23.2

Q ss_pred             CCCCCCCCCcEecCCCceeCCCCCccCC
Q psy6687          17 MCFPQCLNNGTCTAPGVCSCPPGFQGLH   44 (116)
Q Consensus        17 ~c~~~c~~~g~C~~~~~C~c~~g~~g~~   44 (116)
                      .|...|.++|.|.. +.|.|..||.|..
T Consensus       193 ~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d  219 (387)
T 2ddu_A          193 PCPSYCSGHGDCIS-GVCFCDLGYTAAQ  219 (387)
T ss_dssp             CCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred             cCccccCCCceecC-CeEEecCCcccCC
Confidence            36667999999986 8999999999975

>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}

Probab=81.00  E-value=1  Score=30.49  Aligned_cols=29  Identities=31%  Similarity=0.800  Sum_probs=25.3

Q ss_pred             CCCCCCceeCCCCceecCCCCcCCCCCCC
Q psy6687          55 QKCSNGGWCDSQQMCQCPKGYQGTYCGTA   83 (116)
Q Consensus        55 ~~c~~~g~c~~~~~c~C~~g~~g~~c~~~   83 (116)
                      ..|..+|+|.+...|.|.+||..+.|+..
T Consensus       454 ~~C~~~GVCNn~~~CHC~~GwaPP~C~~~  482 (510)
T 3g5c_A          454 TICSGNGVCSNELKCVCNRHWIGSDCNTY  482 (510)
T ss_dssp             CSGGGTEEEBTTSCEEECTTEESTTSCEE
T ss_pred             cccCCCCeeCCCCCcCCCCCCCCCCCCCC
Confidence            35889999988789999999999999853

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=80.54  E-value=0.21  Score=31.12  Aligned_cols=21  Identities=24%  Similarity=0.675  Sum_probs=11.3

Q ss_pred             CCCCCcEecC---CCceeCCCCCc
Q psy6687          88 QCLNNGTCTA---PGVCSCPPGFQ  108 (116)
Q Consensus        88 ~c~~~g~c~~---~~~C~C~~g~~  108 (116)
                      .|..++.|.+   +|.|.|.+||.
T Consensus        14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~   37 (285)
T 1gl4_A           14 QCSVHAECRDYATGFCCRCVANYT   37 (285)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEE
T ss_pred             CCCCCCEeEcCCCCeEEEcCCCCC
Confidence            4555555553   25666666665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.89
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.78
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.67
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.65
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.58
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.54
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.53
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.52
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.52
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.51
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.46
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.41
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.36
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.33
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.32
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.24
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.19
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.1
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	98.1
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.06
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.05
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.04
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.02
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.98
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.97
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.93
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.93
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.62
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.41
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.35
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	97.04
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.04
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	97.01
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.99
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.9
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.87
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	96.66
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	96.6
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	96.38
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	96.23
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.3
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	94.22
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.52
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	90.37
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	89.26
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	89.02
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	88.24
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	88.19
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	87.39
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	82.61

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.8e-10  Score=48.19  Aligned_cols=30  Identities=43%  Similarity=0.992  Sum_probs=22.4

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGT  116 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~~  116 (116)
                      .||.++|+|++   .|+|.|++||+|++|+++|
T Consensus         7 ~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~dT   39 (39)
T d2vj3a2           7 NPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT   39 (39)
T ss_dssp             CCCCSSCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred             CCCCCCCEEECCCCCEEEeCCCCCccCcCeeCc
Confidence            57777777763   3788888888888887664

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.3e-09  Score=45.69  Aligned_cols=29  Identities=38%  Similarity=0.877  Sum_probs=19.0

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      .||.++|+|+.   .|.|.|++||+|.+|+++
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei~   37 (39)
T d1xkba1           6 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF   37 (39)
T ss_dssp             CCCCSSCEECCCSSSCCEECCTTEETTTTCEE
T ss_pred             CCCCCCcEEECCCCCEEEECCCCCCcCcCeEc
Confidence            46666666663   366777777777777654

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.2e-08  Score=43.92  Aligned_cols=30  Identities=53%  Similarity=1.175  Sum_probs=22.1

Q ss_pred             CCCCCCcEecC-----CCceeCCCCCcCCCCCCCC
Q psy6687          87 PQCLNNGTCTA-----PGVCSCPPGFQGLHCEGGT  116 (116)
Q Consensus        87 ~~c~~~g~c~~-----~~~C~C~~g~~g~~C~~~~  116 (116)
                      +||.++|+|..     .+.|.|++||+|.+|++++
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~   38 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   38 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCc
Confidence            57777777762     3678888888888888664

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.6e-08  Score=43.09  Aligned_cols=27  Identities=48%  Similarity=1.136  Sum_probs=17.8

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                      .||.++|+|++   .|+|.|++||+|++|+
T Consensus         9 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           9 NPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            46666666653   3667777777777776

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=8.9e-09  Score=44.67  Aligned_cols=29  Identities=31%  Similarity=0.771  Sum_probs=20.8

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      .+|.++++|++   .|+|.|++||+|++|+++
T Consensus        11 ~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~d   42 (42)
T d2vj3a1          11 NPCEHAGKCINTLGSFECQCLQGYTGPRCEID   42 (42)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSCEE
T ss_pred             CCCCCCcEeECCCCCEEeECCCCCcCCCCcCc
Confidence            46777777764   367888888888887753

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.6e-08  Score=42.37  Aligned_cols=33  Identities=33%  Similarity=0.815  Sum_probs=20.5

Q ss_pred             CCCCCCCCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          49 PGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        49 ~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      +++|...||.++|+|+..   ++|.|++||.|..|+
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            345556666666666532   566777777776665

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.53  E-value=1.6e-08  Score=42.50  Aligned_cols=27  Identities=41%  Similarity=1.093  Sum_probs=18.6

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                      .||.++++|+.   .|.|.|++||+|.+||
T Consensus         8 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           8 SPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            56777777763   3677777777777775

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.6e-08  Score=42.98  Aligned_cols=32  Identities=31%  Similarity=0.699  Sum_probs=17.5

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~   82 (116)
                      +|...||.++|.|+..   ++|.|++||.|.+|++
T Consensus         3 ~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           3 ECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             TTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             CCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            4445555555555432   4566666666666553

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=6.1e-08  Score=41.14  Aligned_cols=32  Identities=28%  Similarity=0.742  Sum_probs=20.5

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~   82 (116)
                      +|...||.++|+|+..   +.|.|++||.|..|++
T Consensus         2 ~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           2 QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             TTTTCCCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             cCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            3455666777777642   5677777777777764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.7e-08  Score=40.88  Aligned_cols=27  Identities=44%  Similarity=1.114  Sum_probs=18.5

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCE  113 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~  113 (116)
                      .||.++|+|+.   .++|.|++||+|.+||
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           6 SPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            46777777763   3677777777777775

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=7.8e-09  Score=44.05  Aligned_cols=29  Identities=41%  Similarity=1.022  Sum_probs=20.3

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~  115 (116)
                      .+|.++|+|+.   .+.|.|++||+|++|+.+
T Consensus         7 ~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~~   38 (39)
T d1g1ta2           7 TSCSGHGECVETINNYTCKCDPGFSGLKCEQI   38 (39)
T ss_dssp             TGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred             CcCCCCcEEECCCCCEEEeCCCCCcCcCcCcc
Confidence            46777777763   367777778888777754

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.41  E-value=2e-08  Score=42.23  Aligned_cols=30  Identities=33%  Similarity=0.900  Sum_probs=15.0

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYC   80 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c   80 (116)
                      +|...||.++|+|+..   +.|.|+++|.|.+|
T Consensus         4 ~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   36 (37)
T d2c4fl1           4 QCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC   36 (37)
T ss_dssp             GGGGCCCCTTCEEEEETTEEEEECCTTEESTTS
T ss_pred             cCCCCCCCCCCEEECCCCCeEEECCCCCcCCCC
Confidence            3444455555555431   45555555555554

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=8e-08  Score=41.55  Aligned_cols=27  Identities=37%  Similarity=0.932  Sum_probs=15.0

Q ss_pred             CCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        55 ~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      .+|.++++|++.   |+|.|++||.|..|+
T Consensus        11 ~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1          11 NPCEHAGKCINTLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSC
T ss_pred             CCCCCCcEeECCCCCEEeECCCCCcCCCCc
Confidence            355555555442   456666666666554

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.2e-07  Score=39.28  Aligned_cols=28  Identities=32%  Similarity=1.006  Sum_probs=12.6

Q ss_pred             CCCCCCCCceeCC---CCceecCCCCcCCCC
Q psy6687          53 CDQKCSNGGWCDS---QQMCQCPKGYQGTYC   80 (116)
Q Consensus        53 ~~~~c~~~g~c~~---~~~c~C~~g~~g~~c   80 (116)
                      ...||.++|+|+.   .++|.|+++|.|.+|
T Consensus         4 ~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   34 (35)
T d2vj3a3           4 ASSPCLHNGRCLDKINEFQCECPTGFTGHLC   34 (35)
T ss_dssp             TTCCSTTTCEEEECSSCEEEECCTTEESSSS
T ss_pred             CCCCCCCCcEEECCCCCeEEECCCCCCCCCc
Confidence            3344444444432   134555555554444

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=41.85  Aligned_cols=17  Identities=29%  Similarity=0.870  Sum_probs=9.3

Q ss_pred             CceeCCCCCcCCCCCCC
Q psy6687          99 GVCSCPPGFQGLHCEGG  115 (116)
Q Consensus        99 ~~C~C~~g~~g~~C~~~  115 (116)
                      |.|.|++||.|.+|+.+
T Consensus        28 y~C~C~~G~~G~~Ce~~   44 (48)
T d1autl1          28 FSCDCRSGWEGRFCQRE   44 (48)
T ss_dssp             CCEEECTTEESTTSCEE
T ss_pred             CeEeCCCCCcCCCcccc
Confidence            45555555555555543

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1e-07  Score=40.67  Aligned_cols=28  Identities=43%  Similarity=0.927  Sum_probs=21.0

Q ss_pred             CCCCCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~  114 (116)
                      .+|.++|+|+.   .+.|.|++||+|++|+.
T Consensus         7 ~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           7 MSCSKQGECLETIGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             TGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             CcCCCCcEEECCCCCeEEeCCCCccCCCCCC
Confidence            56777777763   37888888888888874

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.9e-07  Score=38.25  Aligned_cols=29  Identities=48%  Similarity=1.101  Sum_probs=20.2

Q ss_pred             CCCCCcEecC-----CCceeCCCCCccCCCCCCC
Q psy6687          21 QCLNNGTCTA-----PGVCSCPPGFQGLHCEGGP   49 (116)
Q Consensus        21 ~c~~~g~C~~-----~~~C~c~~g~~g~~c~~~~   49 (116)
                      +|+++|+|+.     .|.|.|+++|+|..|+.++
T Consensus         5 PC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~   38 (41)
T d1tpga1           5 RCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   38 (41)
T ss_dssp             CSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCc
Confidence            5777777753     3577777777777777543

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.10  E-value=4.2e-07  Score=39.14  Aligned_cols=28  Identities=29%  Similarity=0.786  Sum_probs=17.6

Q ss_pred             CCCCCCcEecC----CCceeCCC-CCcCCCCCC
Q psy6687          87 PQCLNNGTCTA----PGVCSCPP-GFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~----~~~C~C~~-g~~g~~C~~  114 (116)
                      ++|.++|+|+.    .+.|.|++ ||+|.+|++
T Consensus         8 nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            46666676642    25677764 677777764

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=5.3e-07  Score=36.77  Aligned_cols=29  Identities=48%  Similarity=1.071  Sum_probs=22.1

Q ss_pred             CCCCCcEecC------CCceeCCCCCcCCCCCCCC
Q psy6687          88 QCLNNGTCTA------PGVCSCPPGFQGLHCEGGT  116 (116)
Q Consensus        88 ~c~~~g~c~~------~~~C~C~~g~~g~~C~~~~  116 (116)
                      .|.++|+|+.      ..+|.||.+|.|.+||+|+
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiDt   37 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK   37 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEecc
Confidence            4677888873      2479999999999998764

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=2.4e-07  Score=39.29  Aligned_cols=32  Identities=28%  Similarity=0.736  Sum_probs=20.4

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~   82 (116)
                      .|...||.++|+|+..   +.|.|++||.|.+|+.
T Consensus         3 ~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           3 ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             CCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             cccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcCc
Confidence            3445567777777542   5677777777777763

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=3.7e-07  Score=38.90  Aligned_cols=30  Identities=33%  Similarity=0.720  Sum_probs=19.7

Q ss_pred             CCCCCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687          52 GCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG   81 (116)
Q Consensus        52 ~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~   81 (116)
                      |...||.++|+|+..   ++|.|+++|.|.+|+
T Consensus         4 C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           4 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             CCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             ccCCcCCCCcEEECCCCCeEEeCCCCccCCCCC
Confidence            445567677777542   567777777777776

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.1e-06  Score=37.87  Aligned_cols=31  Identities=29%  Similarity=0.848  Sum_probs=16.2

Q ss_pred             CCCCCCCCCCceeCCC---CceecCCCCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~   82 (116)
                      +|...||.+ |+|...   +.|.|++||.|.+|+.
T Consensus        10 ~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~   43 (48)
T d1autl1          10 PCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQR   43 (48)
T ss_dssp             SSSSTTTTS-EEECCCSSCCCEEECTTEESTTSCE
T ss_pred             cccCCCCCC-CEEECCCCCCeEeCCCCCcCCCccc
Confidence            344445544 555432   4566666666665553

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=1.2e-06  Score=37.45  Aligned_cols=28  Identities=36%  Similarity=0.909  Sum_probs=17.4

Q ss_pred             CCCCCCcEecC----CCceeCC-CCCcCCCCCC
Q psy6687          87 PQCLNNGTCTA----PGVCSCP-PGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~----~~~C~C~-~g~~g~~C~~  114 (116)
                      .+|.++|+|+.    .++|.|+ +||+|.+|++
T Consensus         7 ~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            46666666642    2567775 4777777764

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=3.6e-06  Score=37.95  Aligned_cols=28  Identities=36%  Similarity=0.907  Sum_probs=19.5

Q ss_pred             CCCCCCcEecC-----CCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCTA-----PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~-----~~~C~C~~g~~g~~C~~  114 (116)
                      .+|.++|+|..     .+.|.|+++|+|.+||.
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            46777777741     36788888888888774

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.97  E-value=4.9e-07  Score=38.93  Aligned_cols=32  Identities=34%  Similarity=0.961  Sum_probs=16.8

Q ss_pred             CCCCCCCCCCceeCC----CCceecCC-CCcCCCCCC
Q psy6687          51 PGCDQKCSNGGWCDS----QQMCQCPK-GYQGTYCGT   82 (116)
Q Consensus        51 ~~~~~~c~~~g~c~~----~~~c~C~~-g~~g~~c~~   82 (116)
                      +|...+|.++|+|+.    .++|.|++ ||.|.+|++
T Consensus         4 ~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             cCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            344455556665542    14566654 566666553

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.7e-06  Score=40.59  Aligned_cols=28  Identities=39%  Similarity=1.064  Sum_probs=15.9

Q ss_pred             CCCCCCcEec--------CCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT--------APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~--------~~~~C~C~~g~~g~~C~~  114 (116)
                      .+|.++|+|.        ..+.|.|++||+|.+|+.
T Consensus        12 ~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_          12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            4566666662        124566666666666653

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=1.3e-06  Score=37.38  Aligned_cols=31  Identities=42%  Similarity=0.959  Sum_probs=15.4

Q ss_pred             CCCCCCCCCceeCC----CCceecC-CCCcCCCCCC
Q psy6687          52 GCDQKCSNGGWCDS----QQMCQCP-KGYQGTYCGT   82 (116)
Q Consensus        52 ~~~~~c~~~g~c~~----~~~c~C~-~g~~g~~c~~   82 (116)
                      |...||.++|+|+.    .++|.|+ ++|.|.+|++
T Consensus         4 C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             TTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            34445555555532    1455554 3555555553

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=4.7e-06  Score=36.80  Aligned_cols=28  Identities=32%  Similarity=0.834  Sum_probs=21.6

Q ss_pred             CCCCCCcEecC-----CCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCTA-----PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~-----~~~C~C~~g~~g~~C~~  114 (116)
                      .+|.++|+|..     .+.|.|+++|+|.+|+.
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            46788888851     26899999999999874

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=7.1e-05  Score=34.82  Aligned_cols=30  Identities=37%  Similarity=0.959  Sum_probs=22.8

Q ss_pred             CCCCCcEec-----C---CCceeCCCCCccCCCCCCCC
Q psy6687          21 QCLNNGTCT-----A---PGVCSCPPGFQGLHCEGGPG   50 (116)
Q Consensus        21 ~c~~~g~C~-----~---~~~C~c~~g~~g~~c~~~~~   50 (116)
                      +|.++|+|.     +   .|.|.|+++|+|..|+..+.
T Consensus        13 ~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~~   50 (63)
T d1haea_          13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVP   50 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECC
T ss_pred             cCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCCC
Confidence            588889884     1   46789999999998885543

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=5e-05  Score=34.06  Aligned_cols=30  Identities=43%  Similarity=0.925  Sum_probs=20.8

Q ss_pred             CCCCCCCCceeCC-----CCceecCCCCcCCCCCC
Q psy6687          53 CDQKCSNGGWCDS-----QQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        53 ~~~~c~~~g~c~~-----~~~c~C~~g~~g~~c~~   82 (116)
                      ...+|.++|+|..     .++|.|+++|.|.+|+.
T Consensus        10 ~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          10 YDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            3446777777742     25788888888888874

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=8.9e-05  Score=28.67  Aligned_cols=24  Identities=33%  Similarity=1.053  Sum_probs=17.6

Q ss_pred             CCCCcEecCCCceeCCCCCccCCCC
Q psy6687          22 CLNNGTCTAPGVCSCPPGFQGLHCE   46 (116)
Q Consensus        22 c~~~g~C~~~~~C~c~~g~~g~~c~   46 (116)
                      |+++|.|.- +.|.|..+|+|.+|.
T Consensus         5 C~ghG~C~C-G~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           5 CSGHGQCSC-GDCLCDSDWTGYYCN   28 (31)
T ss_dssp             SCCCTTCCS-TTTCCCTTEESSSSC
T ss_pred             ccCCCcccC-CceEccCCccccccc
Confidence            566777764 678888888887775

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=5.2e-05  Score=33.31  Aligned_cols=29  Identities=34%  Similarity=0.781  Sum_probs=19.1

Q ss_pred             CCCCCCCceeCC-----CCceecCCCCcCCCCCC
Q psy6687          54 DQKCSNGGWCDS-----QQMCQCPKGYQGTYCGT   82 (116)
Q Consensus        54 ~~~c~~~g~c~~-----~~~c~C~~g~~g~~c~~   82 (116)
                      ..+|.++|+|..     .++|.|+++|+|.+|+.
T Consensus         9 ~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           9 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            345666777742     15777888888887763

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00012  Score=28.26  Aligned_cols=25  Identities=32%  Similarity=0.998  Sum_probs=14.9

Q ss_pred             CCCCCcEecCCCceeCCCCCcCCCCC
Q psy6687          88 QCLNNGTCTAPGVCSCPPGFQGLHCE  113 (116)
Q Consensus        88 ~c~~~g~c~~~~~C~C~~g~~g~~C~  113 (116)
                      .|.++|.|.- +.|.|.++|+|.+|.
T Consensus         4 ~C~ghG~C~C-G~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSC-GDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCS-TTTCCCTTEESSSSC
T ss_pred             eccCCCcccC-CceEccCCccccccc
Confidence            3455555553 566666677666654

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00014  Score=32.08  Aligned_cols=28  Identities=25%  Similarity=0.656  Sum_probs=21.1

Q ss_pred             CCCCCCcEecC----CCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCTA----PGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~~----~~~C~C~~g~~g~~C~~  114 (116)
                      ..|.+++.|..    ...|.|+.||+|.+||.
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            46777777741    25799999999999974

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00029  Score=30.46  Aligned_cols=27  Identities=37%  Similarity=1.061  Sum_probs=17.2

Q ss_pred             CCCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|.+ |.|.     ....|.|++||+|.+|+.
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            35665 4453     125688888888888874

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00011  Score=32.31  Aligned_cols=28  Identities=25%  Similarity=0.656  Sum_probs=20.2

Q ss_pred             CCCCCCcEec----CCCceeCCCCCcCCCCCC
Q psy6687          87 PQCLNNGTCT----APGVCSCPPGFQGLHCEG  114 (116)
Q Consensus        87 ~~c~~~g~c~----~~~~C~C~~g~~g~~C~~  114 (116)
                      ..|.+++.|.    ....|.|++||+|.+||.
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEecCCcc
Confidence            4577777663    125799999999999973

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00035  Score=29.40  Aligned_cols=21  Identities=48%  Similarity=1.296  Sum_probs=15.6

Q ss_pred             CcEecCCCceeCCCCCcCCCCC
Q psy6687          92 NGTCTAPGVCSCPPGFQGLHCE  113 (116)
Q Consensus        92 ~g~c~~~~~C~C~~g~~g~~C~  113 (116)
                      +|+|+. +.|.|.+||+|+.|+
T Consensus        20 hG~C~~-G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          20 RGLCFC-GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HEEEET-TEEEECTTCCTTTTC
T ss_pred             CCeEEC-CEEEcCCCCcccCcc
Confidence            567764 678888888888776

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0004  Score=29.43  Aligned_cols=26  Identities=42%  Similarity=1.000  Sum_probs=18.2

Q ss_pred             CCCCCcEecCCCceeCC-CCCcCCCCCC
Q psy6687          88 QCLNNGTCTAPGVCSCP-PGFQGLHCEG  114 (116)
Q Consensus        88 ~c~~~g~c~~~~~C~C~-~g~~g~~C~~  114 (116)
                      .|+.+|+|+. ++|.|. ++|.|+.|+.
T Consensus        12 iCng~G~C~c-G~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          12 LCSGRGKCEC-GSCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             GGGGTEEEET-TEEEECCSSCBSTTSCB
T ss_pred             EECCCCEEEC-CEeEeCCCCccCCcccc
Confidence            4667777775 677774 6788887764

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00055  Score=28.76  Aligned_cols=16  Identities=44%  Similarity=1.267  Sum_probs=11.5

Q ss_pred             CceeCCCCCcCCCCCC
Q psy6687          99 GVCSCPPGFQGLHCEG  114 (116)
Q Consensus        99 ~~C~C~~g~~g~~C~~  114 (116)
                      ..|.|..||+|.+|+.
T Consensus        24 ~~C~C~~gY~G~RCq~   39 (41)
T d1xdtr_          24 PSCICHPGYHGERCHG   39 (41)
T ss_dssp             CCEEECTTEESTTCCE
T ss_pred             ceeECCCCCeecCccc
Confidence            4677777777777763

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.00085  Score=28.16  Aligned_cols=22  Identities=45%  Similarity=1.244  Sum_probs=19.2

Q ss_pred             CCcEecCCCceeCCCCCccCCCC
Q psy6687          24 NNGTCTAPGVCSCPPGFQGLHCE   46 (116)
Q Consensus        24 ~~g~C~~~~~C~c~~g~~g~~c~   46 (116)
                      .+|+|.. +.|.|.++|+|+.|+
T Consensus        19 ~hG~C~~-G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          19 GRGLCFC-GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HHEEEET-TEEEECTTCCTTTTC
T ss_pred             CCCeEEC-CEEEcCCCCcccCcc
Confidence            4688986 899999999999986

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0076  Score=25.41  Aligned_cols=10  Identities=50%  Similarity=1.268  Sum_probs=4.8

Q ss_pred             CceecCCCCc
Q psy6687          67 QMCQCPKGYQ   76 (116)
Q Consensus        67 ~~c~C~~g~~   76 (116)
                      |.|.|++||.
T Consensus        26 y~C~C~~Gy~   35 (43)
T d1emoa1          26 YRCECPFGYI   35 (43)
T ss_dssp             CCCCCCTTEE
T ss_pred             eEeECCCCcc
Confidence            4455555543

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.22  E-value=0.0062  Score=25.29  Aligned_cols=21  Identities=24%  Similarity=0.736  Sum_probs=14.9

Q ss_pred             CCCCcEecC---CCceeCCCCCcc
Q psy6687          22 CLNNGTCTA---PGVCSCPPGFQG   42 (116)
Q Consensus        22 c~~~g~C~~---~~~C~c~~g~~g   42 (116)
                      |..++.|++   +|.|.|.+||.|
T Consensus         9 C~~~A~C~Nt~Gsy~C~C~~Gy~G   32 (40)
T d1gl4a2           9 CSVHAECRDYATGFCCRCVANYTG   32 (40)
T ss_dssp             SCTTEEEEECSSCEEEEECTTEEE
T ss_pred             CCCCCEeecCCCCeEeECCCCCcC
Confidence            556677765   577888888875

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.0095  Score=25.24  Aligned_cols=18  Identities=28%  Similarity=0.765  Sum_probs=11.4

Q ss_pred             cEecC---CCceeCCCCCcCC
Q psy6687          93 GTCTA---PGVCSCPPGFQGL  110 (116)
Q Consensus        93 g~c~~---~~~C~C~~g~~g~  110 (116)
                      +.|.+   +|.|.|++||.+.
T Consensus        16 ~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1          16 GQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             SCEEEETTEEEECCCSSEEEC
T ss_pred             CEeEcCCCCeEEeCCCCCccC
Confidence            45653   3677777777654

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.37  E-value=0.029  Score=23.46  Aligned_cols=9  Identities=56%  Similarity=1.660  Sum_probs=4.4

Q ss_pred             CceeCCCCC
Q psy6687          99 GVCSCPPGF  107 (116)
Q Consensus        99 ~~C~C~~g~  107 (116)
                      |.|.|++||
T Consensus        24 y~C~C~~Gy   32 (43)
T d1uzka1          24 YICDCPPDF   32 (43)
T ss_dssp             EEEECCTTC
T ss_pred             EEEecCCCC
Confidence            445555444

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.26  E-value=0.091  Score=23.12  Aligned_cols=11  Identities=55%  Similarity=1.319  Sum_probs=6.7

Q ss_pred             CCCCCcCCCCC
Q psy6687         103 CPPGFQGLHCE  113 (116)
Q Consensus       103 C~~g~~g~~C~  113 (116)
                      |+++|+|++|+
T Consensus        23 C~~~~~G~~Ce   33 (55)
T d1kloa1          23 CPTGTAGKRCE   33 (55)
T ss_dssp             CCTTEESTTSC
T ss_pred             CCCCCccCccc
Confidence            66666666655

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.02  E-value=0.067  Score=23.17  Aligned_cols=15  Identities=40%  Similarity=1.065  Sum_probs=9.3

Q ss_pred             CceeCCCCCcCCCCC
Q psy6687          99 GVCSCPPGFQGLHCE  113 (116)
Q Consensus        99 ~~C~C~~g~~g~~C~  113 (116)
                      ++|.|.++++|++|+
T Consensus        20 GqC~Ck~~v~G~~Cd   34 (51)
T d1kloa3          20 GQCQCLPHVSGRDCG   34 (51)
T ss_dssp             CCCCBCTTEESTTCC
T ss_pred             CeecCCCCCcCCCcc
Confidence            566666666666654

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.1  Score=21.71  Aligned_cols=16  Identities=38%  Similarity=1.072  Sum_probs=12.7

Q ss_pred             cEecC---CCceeCCCCCc
Q psy6687          26 GTCTA---PGVCSCPPGFQ   41 (116)
Q Consensus        26 g~C~~---~~~C~c~~g~~   41 (116)
                      +.|++   +|.|.|++||.
T Consensus        16 ~~C~Nt~Gsy~C~C~~Gy~   34 (43)
T d1uzka2          16 GKCINTFGSFQCRCPTGYY   34 (43)
T ss_dssp             SEEEECSSCEEEECCTTCC
T ss_pred             CEEECCCCCeEeECCCCCe
Confidence            57775   58899999986

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.19  E-value=0.068  Score=22.16  Aligned_cols=21  Identities=43%  Similarity=1.002  Sum_probs=14.7

Q ss_pred             CCCCCcEecC---CCceeCCCCCcC
Q psy6687          88 QCLNNGTCTA---PGVCSCPPGFQG  109 (116)
Q Consensus        88 ~c~~~g~c~~---~~~C~C~~g~~g  109 (116)
                      .|. ++.|++   +|.|.|++||..
T Consensus        11 ~C~-~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          11 LCR-GGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TTT-TSEEEEETTEEEEESCTTSCC
T ss_pred             CCC-CCEeECCCCCeEEeCCCCCeE
Confidence            353 467774   489999999863

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.39  E-value=0.22  Score=20.35  Aligned_cols=11  Identities=45%  Similarity=0.945  Sum_probs=9.0

Q ss_pred             CCceeCCCCCc
Q psy6687          98 PGVCSCPPGFQ  108 (116)
Q Consensus        98 ~~~C~C~~g~~  108 (116)
                      +++|.|++||.
T Consensus        20 sy~C~C~~Gy~   30 (41)
T d1i0ua2          20 GYKCQCEEGFQ   30 (41)
T ss_dssp             CCEECCCTTEE
T ss_pred             CEEeECCCCCe
Confidence            48899999886

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.61  E-value=0.19  Score=20.52  Aligned_cols=12  Identities=25%  Similarity=0.360  Sum_probs=9.3

Q ss_pred             CCceeCCCCCcC
Q psy6687          98 PGVCSCPPGFQG  109 (116)
Q Consensus        98 ~~~C~C~~g~~g  109 (116)
                      +|+|.|++||+.
T Consensus        21 sy~C~C~~Gy~l   32 (40)
T d1dx5i3          21 TFECICGPDSAL   32 (40)
T ss_dssp             SEEEEECSSSSC
T ss_pred             CeEeECCCCCee
Confidence            478888888864