Psyllid ID: psy6895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60---
Protein Sequence
MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Secondary Structure (PSIPRED)
ccEEccccccHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHcccccccEEEcc
Secondary Structure Prediction (SSPRO)
cEEEEccccHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHccccccEEEEEcc
Coil and Loop (DISEMBL)
mlmfreekspedEIKAWQFWHSRQHSSIVMLMFreekspedEIKAWQFWhsrqhsvkYFRIHF
Flexible Loop (DISEMBL)
mlmfreekspedeikawqfwhsrqHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Low Complexity Region (SEG)
MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Disordered region (IsUnstruct)
*************IKAWQFWHSRQHSSIVMLMFR*******EIKAWQFWHSRQHSVKYFRI**
Disordered Region (DISOPRED)
**************KAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSV*YFRIHF
Disordered Region (DISEMBL)
************EIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Disordered Region (DISPRO)
MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	63	2.2.26 [Sep-21-2011]
P13002	1333	Protein grainyhead OS=Dro	no	N/A	0.492	0.023	0.935	5e-13
Q5PPL8	595	Grainyhead-like protein 3	N/A	N/A	0.714	0.075	0.422	0.0001
Q5M7R9	619	Grainyhead-like protein 2	yes	N/A	0.492	0.050	0.451	0.0002
Q6GL65	594	Grainyhead-like protein 3	no	N/A	0.571	0.060	0.472	0.0002
Q921D9	618	Grainyhead-like protein 1	no	N/A	0.492	0.050	0.516	0.0002
Q9NZI5	618	Grainyhead-like protein 1	yes	N/A	0.492	0.050	0.516	0.0002
Q5EY87	609	Grainyhead-like protein 1	N/A	N/A	0.492	0.050	0.483	0.0004
Q5RAR8	618	Grainyhead-like protein 1	yes	N/A	0.492	0.050	0.516	0.0004
Q8K5C0	625	Grainyhead-like protein 2	no	N/A	0.492	0.049	0.483	0.0008
Q6ISB3	625	Grainyhead-like protein 2	no	N/A	0.492	0.049	0.483	0.0008

>sp|P13002|ELF1_DROME Protein grainyhead OS=Drosophila melanogaster GN=grh PE=2 SV=3

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 952 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 982

Binds a CNS-specific regulatory element of the Dopa decarboxylase (Ddc) gene. Also interacts with sequences adjacent to other transcription units, including Ultrabithorax (Ubx) and engrailed (en). Activity in vivo may be required only at high levels transiently to activate the expression of Ddc in the CNS.
Drosophila melanogaster (taxid: 7227)

>sp|Q5PPL8|GRHL3_XENLA Grainyhead-like protein 3 homolog OS=Xenopus laevis GN=grhl3 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 13  EIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           EI+      S +  S+VM++F  EK+PE+++K W+ WHSRQ + K
Sbjct: 261 EIRKCVHLTSNKVKSVVMVVFDNEKNPEEQLKRWKHWHSRQPTAK 305

May function as a transcription factor.

Xenopus laevis (taxid: 8355)

>sp|Q5M7R9|GRHL2_XENTR Grainyhead-like protein 2 homolog OS=Xenopus tropicalis GN=grhl2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++M++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 293 SVIMVVFSEDKNRDEQLKYWKYWHSRQHTAK 323

May function as a transcription factor.

Xenopus tropicalis (taxid: 8364)

>sp|Q6GL65|GRHL3_XENTR Grainyhead-like protein 3 homolog OS=Xenopus tropicalis GN=grhl3 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 22  SRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S +  S+VM++F  EK+PE+++K W+ WHSRQ + K
Sbjct: 269 SNKVKSVVMVVFDNEKNPEEQLKRWKHWHSRQPTAK 304

May function as a transcription factor.

Xenopus tropicalis (taxid: 8364)

>sp|Q921D9|GRHL1_MOUSE Grainyhead-like protein 1 homolog OS=Mus musculus GN=Grhl1 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

Transcription factor. May play a role in development. Binds and transactivates the EN1 promoter.

Mus musculus (taxid: 10090)

>sp|Q9NZI5|GRHL1_HUMAN Grainyhead-like protein 1 homolog OS=Homo sapiens GN=GRHL1 PE=1 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

Transcription factor. Isoform 1 may function as an activator and isoform 2 as a repressor in tissues where both forms are expressed. May play a role in development. May be involved in epidermal differentiation (By similarity). Binds and transactivates the EN1 promoter.

Homo sapiens (taxid: 9606)

>sp|Q5EY87|GRHL1_XENLA Grainyhead-like protein 1 homolog OS=Xenopus laevis GN=grhl1 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++M++F ++KS ED+++ W++WHSRQH+ K
Sbjct: 293 SVIMVVFADDKSREDQLRHWKYWHSRQHTAK 323

Transcription factor. May play a role in modulating expression of epidermal-specific genes, including XK81A1. Functions downstream of BMP-signaling cascade modulating endogenous bmp4-responsive targets. Binds and transactivates the EN1 promoter. May play a role in development.

Xenopus laevis (taxid: 8355)

>sp|Q5RAR8|GRHL1_PONAB Grainyhead-like protein 1 homolog OS=Pongo abelii GN=GRHL1 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 26/31 (83%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S+ M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVTMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

Transcription factor. May play a role in development. May be involved in epidermal differentiation. Binds and transactivates the EN1 promoter.

Pongo abelii (taxid: 9601)

>sp|Q8K5C0|GRHL2_MOUSE Grainyhead-like protein 2 homolog OS=Mus musculus GN=Grhl2 PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328

May function as a transcription factor.

Mus musculus (taxid: 10090)

>sp|Q6ISB3|GRHL2_HUMAN Grainyhead-like protein 2 homolog OS=Homo sapiens GN=GRHL2 PE=1 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328

May function as a transcription factor.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	63
28573539	1032	grainy head, isoform H [Drosophila melan	0.492	0.030	0.935	2e-11
28573537	1302	grainy head, isoform L [Drosophila melan	0.492	0.023	0.935	2e-11
28573541	1063	grainy head, isoform I [Drosophila melan	0.492	0.029	0.935	2e-11
28573543	1333	grainy head, isoform J [Drosophila melan	0.492	0.023	0.935	2e-11
198460691	918	GA25050 [Drosophila pseudoobscura pseudo	0.492	0.033	0.935	2e-11
195121704	1332	GI19118 [Drosophila mojavensis] gi|19391	0.492	0.023	0.935	2e-11
195029567	1344	GH22029 [Drosophila grimshawi] gi|193903	0.492	0.023	0.935	2e-11
194880891	888	GG21828 [Drosophila erecta] gi|190657773	0.492	0.034	0.935	2e-11
7939	1063	unnamed protein product [Drosophila mela	0.492	0.029	0.935	2e-11
15292443	729	LP11035p [Drosophila melanogaster]	0.492	0.042	0.935	2e-11

>gi|28573539|ref|NP_476843.2| grainy head, isoform H [Drosophila melanogaster] gi|28380744|gb|AAM68468.2| grainy head, isoform H [Drosophila melanogaster] gi|117935519|gb|ABK57088.1| IP16310p [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 682 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 712

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|28573537|ref|NP_476844.2| grainy head, isoform L [Drosophila melanogaster] gi|28380742|gb|AAF57784.3| grainy head, isoform L [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 952 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 982

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|28573541|ref|NP_476842.2| grainy head, isoform I [Drosophila melanogaster] gi|28380743|gb|AAF57782.3| grainy head, isoform I [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 682 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 712

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|28573543|ref|NP_476845.2| grainy head, isoform J [Drosophila melanogaster] gi|37999920|sp|P13002.3|ELF1_DROME RecName: Full=Protein grainyhead; AltName: Full=DNA-binding protein ELF-1; AltName: Full=Element I-binding activity; AltName: Full=Protein grainy-head; AltName: Full=Transcription factor NTF-1 gi|28380741|gb|AAM68467.2| grainy head, isoform J [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 952 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 982

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198460691|ref|XP_002138875.1| GA25050 [Drosophila pseudoobscura pseudoobscura] gi|198137097|gb|EDY69433.1| GA25050 [Drosophila pseudoobscura pseudoobscura]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 568 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 598

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195121704|ref|XP_002005360.1| GI19118 [Drosophila mojavensis] gi|193910428|gb|EDW09295.1| GI19118 [Drosophila mojavensis]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27   SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
            S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 982  SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 1012

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195029567|ref|XP_001987643.1| GH22029 [Drosophila grimshawi] gi|193903643|gb|EDW02510.1| GH22029 [Drosophila grimshawi]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27   SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
            S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 994  SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 1024

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194880891|ref|XP_001974586.1| GG21828 [Drosophila erecta] gi|190657773|gb|EDV54986.1| GG21828 [Drosophila erecta]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 538 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 568

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|7939|emb|CAA33692.1| unnamed protein product [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 682 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 712

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|15292443|gb|AAK93490.1| LP11035p [Drosophila melanogaster]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 348 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 378

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	63
FB|FBgn0259211	1333	grh "grainy head" [Drosophila	0.492	0.023	0.935	6.3e-11
ZFIN|ZDB-GENE-030131-3665	613	grhl1 "grainyhead-like 1 (Dros	0.492	0.050	0.580	5.1e-06
UNIPROTKB|Q9NZI5	618	GRHL1 "Grainyhead-like protein	0.492	0.050	0.516	1.1e-05
MGI|MGI:2182540	618	Grhl1 "grainyhead-like 1 (Dros	0.492	0.050	0.516	1.1e-05
RGD|1305735	618	Grhl1 "grainyhead-like 1 (Dros	0.492	0.050	0.516	1.1e-05
UNIPROTKB|Q0VCW0	629	GRHL1 "Grainyhead-like 1 (Dros	0.492	0.049	0.516	1.1e-05
UNIPROTKB|E1BY47	624	GRHL1 "Uncharacterized protein	0.492	0.049	0.483	2.3e-05
ZFIN|ZDB-GENE-060503-719	601	grhl2b "grainyhead-like 2b (Dr	0.492	0.051	0.483	4.6e-05
UNIPROTKB|F1NXA4	617	F1NXA4 "Uncharacterized protei	0.492	0.050	0.483	4.8e-05
UNIPROTKB|F1PBL0	625	GRHL2 "Uncharacterized protein	0.492	0.049	0.483	4.9e-05

FB|FBgn0259211 grh "grainy head" [Drosophila melanogaster (taxid:7227)]

 Score = 166 (63.5 bits), Expect = 6.3e-11, P = 6.3e-11
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct:   952 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 982

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEP

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0007009 "plasma membrane organization" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0007424 "open tracheal system development" evidence=IEP;TAS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0007402 "ganglion mother cell fate determination" evidence=TAS

GO:0007419 "ventral cord development" evidence=NAS

GO:0035152 "regulation of tube architecture, open tracheal system" evidence=TAS

GO:0007428 "primary branching, open tracheal system" evidence=TAS

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

GO:0003382 "epithelial cell morphogenesis" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0061041 "regulation of wound healing" evidence=IMP

GO:0040003 "chitin-based cuticle development" evidence=IMP

GO:0042052 "rhabdomere development" evidence=IMP

ZFIN|ZDB-GENE-030131-3665 grhl1 "grainyhead-like 1 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 18/31 (58%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S+VM++F EEKS +D++K W++WHSRQH+ K
Sbjct:   292 SVVMVVFGEEKSRDDQLKHWKYWHSRQHTAK 322

GO:0005737 "cytoplasm" evidence=IDA

GO:0003334 "keratinocyte development" evidence=IMP

GO:0008544 "epidermis development" evidence=IMP

UNIPROTKB|Q9NZI5 GRHL1 "Grainyhead-like protein 1 homolog" [Homo sapiens (taxid:9606)]

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct:   302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

MGI|MGI:2182540 Grhl1 "grainyhead-like 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct:   302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

GO:0003677 "DNA binding" evidence=ISA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISA

GO:0007275 "multicellular organismal development" evidence=IEA

RGD|1305735 Grhl1 "grainyhead-like 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct:   302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

UNIPROTKB|Q0VCW0 GRHL1 "Grainyhead-like 1 (Drosophila)" [Bos taurus (taxid:9913)]

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 16/31 (51%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct:   301 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 331

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E1BY47 GRHL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S++M++F E+K+ ED+++ W++WHSRQH+ K
Sbjct:   297 SVIMVVFAEDKTREDQLRHWKYWHSRQHTAK 327

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

ZFIN|ZDB-GENE-060503-719 grhl2b "grainyhead-like 2b (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 107 (42.7 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct:   283 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 313

GO:0048839 "inner ear development" evidence=IMP

UNIPROTKB|F1NXA4 F1NXA4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct:   293 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 323

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1PBL0 GRHL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 15/31 (48%), Positives = 27/31 (87%)

Query:    27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
             S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct:   298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P13002	ELF1_DROME	No assigned EC number	0.9354	0.4920	0.0232	no	N/A
Q5RAR8	GRHL1_PONAB	No assigned EC number	0.5161	0.4920	0.0501	yes	N/A
Q9NZI5	GRHL1_HUMAN	No assigned EC number	0.5161	0.4920	0.0501	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	63
pfam04516	237	pfam04516, CP2, CP2 transcription factor	1e-09
pfam04516	237	pfam04516, CP2, CP2 transcription factor	4e-07

>gnl|CDD|218123 pfam04516, CP2, CP2 transcription factor

 Score = 51.2 bits (123), Expect = 1e-09
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 27  SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
           S+V ++F EEK      K WQ W +RQ   K
Sbjct: 92  SVVRVVFEEEKQRSKPAKCWQLWKARQRGGK 122

This family represents a conserved region in the CP2 transcription factor family. Length = 237

>gnl|CDD|218123 pfam04516, CP2, CP2 transcription factor

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 1   MLMFREEKSPEDEIKAWQFWHSRQHSS 27
            ++F EEK      K WQ W +RQ   
Sbjct: 95  RVVFEEEKQRSKPAKCWQLWKARQRGG 121

This family represents a conserved region in the CP2 transcription factor family. Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	63
PF04516	236	CP2: CP2 transcription factor; InterPro: IPR007604	99.09
KOG4091|consensus	463		99.04
PF04516	236	CP2: CP2 transcription factor; InterPro: IPR007604	97.84
KOG4091|consensus	463		97.74

>PF04516 CP2: CP2 transcription factor; InterPro: IPR007604 This entry represents a conserved region in the CP2 transcription factor family

Probab=99.09  E-value=2.6e-11  Score=87.46  Aligned_cols=43  Identities=28%  Similarity=0.552  Sum_probs=40.2

Q ss_pred             ccCccceeeEEeeecCCCcHHHHhhcccCCCCCCCccceeecC
Q psy6895          21 HSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF   63 (63)
Q Consensus        21 hsrqv~Sv~mvVf~e~K~~e~elk~wq~WhsrQ~~~kqr~~~~   63 (63)
                      +...++|++||+|.|++.+.+|+++|++||++||++|||||||
T Consensus        85 ~~~~~kS~I~v~F~d~~~~~~~~~~w~~W~~~q~g~k~r~lei  127 (236)
T PF04516_consen   85 QPSKVKSVIRVVFHDEKLRYEEAKQWQLWKARQPGGKQRALEI  127 (236)
T ss_pred             CCcceeEEEEEEEcCCccccCHHHHHHHHHHhCCCchhhhhhh
Confidence            4445899999999999999999999999999999999999986

>KOG4091|consensus

Probab=99.04  E-value=1.1e-10  Score=90.74  Aligned_cols=43  Identities=47%  Similarity=0.740  Sum_probs=39.8

Q ss_pred             ccCccceeeEEeeecCCCcHHHHhhcccCCCCCCCccceeecC
Q psy6895          21 HSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF   63 (63)
Q Consensus        21 hsrqv~Sv~mvVf~e~K~~e~elk~wq~WhsrQ~~~kqr~~~~   63 (63)
                      ++..++|++||||.|.|+.++|++.|++||++||+++||++||
T Consensus       117 ns~~~~Sii~vvf~e~k~~~~e~k~~q~w~~~~~~~~~r~ldv  159 (463)
T KOG4091|consen  117 NSKVVKSIIMVVFHEDKNQETEHKQWQGWHSRQHSAKQRILDI  159 (463)
T ss_pred             cccccceEEEEEeeccccchhHhhhhhhhhhcCccccCceecc
Confidence            4455579999999999999999999999999999999999996

>PF04516 CP2: CP2 transcription factor; InterPro: IPR007604 This entry represents a conserved region in the CP2 transcription factor family

Probab=97.84  E-value=3.2e-06  Score=61.20  Aligned_cols=39  Identities=28%  Similarity=0.491  Sum_probs=35.7

Q ss_pred             CccccCCCCchHHhhhhcccccCccceeeEEeee-cCCCc
Q psy6895           1 MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFR-EEKSP   39 (63)
Q Consensus         1 m~vf~e~k~~e~~~k~w~~Whsrqv~Sv~mvVf~-e~K~~   39 (63)
                      ||||.|++.++.+++||++||++|+..++++|.. |-+..
T Consensus        94 ~v~F~d~~~~~~~~~~w~~W~~~q~g~k~r~leivD~~~s  133 (236)
T PF04516_consen   94 RVVFHDEKLRYEEAKQWQLWKARQPGGKQRALEIVDIKQS  133 (236)
T ss_pred             EEEEcCCccccCHHHHHHHHHHhCCCchhhhhhhccCCCC
Confidence            6899999999999999999999999999999988 66553

>KOG4091|consensus

Probab=97.74  E-value=9.8e-06  Score=63.54  Aligned_cols=33  Identities=48%  Similarity=0.809  Sum_probs=32.4

Q ss_pred             CccccCCCCchHHhhhhcccccCccceeeEEee
Q psy6895           1 MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMF   33 (63)
Q Consensus         1 m~vf~e~k~~e~~~k~w~~Whsrqv~Sv~mvVf   33 (63)
                      ||||+|+|+.++|+|.|++||+++|++..++.+
T Consensus       126 ~vvf~e~k~~~~e~k~~q~w~~~~~~~~~r~ld  158 (463)
T KOG4091|consen  126 MVVFHEDKNQETEHKQWQGWHSRQHSAKQRILD  158 (463)
T ss_pred             EEEeeccccchhHhhhhhhhhhcCccccCceec
Confidence            799999999999999999999999999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00