Psyllid ID: psy7032


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
MFGLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKEK
ccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcc
cccHHHHHHHHHHHHHHHHHEccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
MFGLRQIDKMRKDSIKLWLSyfddsptlpppfnifptTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYAAVMRALVWRYICLQhrqadtnpvteddvnEVKGEITAMRYELMNVLEkngmdtssadkkek
MFGLRQIDKMRKDSIKLWLSyfddsptlppPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQqarqekerdfRYAAVMRALVWRYICLQhrqadtnpvteddvneVKGEITAMRYELMNvlekngmdtssadkkek
MFGLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKEK
*************SIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQI********************DFRYAAVMRALVWRYICLQHRQADT*******VNEVKGEITAMRYELMNV****************
**GLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQI***********************YAAVMRALVWRYI******************EVKGEITAMRYELMNV****************
MFGLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRK**************RDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNG***********
*FGLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRK***********EKERDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNG***********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MFGLRQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKEK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query136 2.2.26 [Sep-21-2011]
P48994 1124 Transient-receptor-potent yes N/A 0.852 0.103 0.487 8e-31
Q9VJJ7 1128 Transient receptor potent no N/A 0.838 0.101 0.429 1e-23
P19334 1275 Transient receptor potent no N/A 0.845 0.090 0.380 3e-17
Q9QX29 975 Short transient receptor yes N/A 0.889 0.124 0.364 7e-16
O62852 974 Short transient receptor yes N/A 0.779 0.108 0.384 1e-14
Q9UL62 973 Short transient receptor yes N/A 0.779 0.108 0.376 7e-13
O35119 977 Short transient receptor no N/A 0.816 0.113 0.333 1e-11
Q9QUQ5 974 Short transient receptor no N/A 0.816 0.113 0.333 1e-11
P48995793 Short transient receptor no N/A 0.816 0.139 0.344 2e-11
Q9TUN9759 Short transient receptor no N/A 0.816 0.146 0.344 2e-11
>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila melanogaster GN=trpl PE=1 SV=2 Back     alignment and function desciption
 Score =  132 bits (331), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 86/121 (71%), Gaps = 5/121 (4%)

Query: 16  KLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYA 75
           KLW+SYF+DS TLPPPFN+ P+ K  +++F      K  K   +++ + R+E+E+   Y 
Sbjct: 689 KLWMSYFEDSATLPPPFNVLPSVKWVIRIF-----RKSSKTIDRQRSKKRKEQEQFSEYD 743

Query: 76  AVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKE 135
            +MR+LVWRY+   HR+ + NPV+EDD+NEVK EI  MRYE++ + E +GMD SSA+KKE
Sbjct: 744 NIMRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLEIFENSGMDVSSANKKE 803

Query: 136 K 136
           +
Sbjct: 804 R 804




A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.
Drosophila melanogaster (taxid: 7227)
>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila melanogaster GN=trpgamma PE=1 SV=2 Back     alignment and function description
>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster GN=trp PE=1 SV=3 Back     alignment and function description
>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus GN=Trpc5 PE=1 SV=2 Back     alignment and function description
>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus cuniculus GN=TRPC5 PE=2 SV=1 Back     alignment and function description
>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens GN=TRPC5 PE=1 SV=1 Back     alignment and function description
>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus GN=Trpc4 PE=1 SV=2 Back     alignment and function description
>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus GN=Trpc4 PE=1 SV=1 Back     alignment and function description
>sp|P48995|TRPC1_HUMAN Short transient receptor potential channel 1 OS=Homo sapiens GN=TRPC1 PE=1 SV=1 Back     alignment and function description
>sp|Q9TUN9|TRPC1_RABIT Short transient receptor potential channel 1 OS=Oryctolagus cuniculus GN=TRPC1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
91080143 1213 PREDICTED: similar to calmodulin-binding 0.875 0.098 0.619 2e-37
170038655 1295 calmodulin-binding protein trpl [Culex q 0.852 0.089 0.593 7e-35
312374676 679 hypothetical protein AND_15660 [Anophele 0.867 0.173 0.545 4e-34
157110448 776 transient receptor potential channel 4, 0.867 0.152 0.545 2e-33
357607162 528 putative calmodulin-binding protein trpl 0.838 0.215 0.570 3e-33
158284739 1081 AGAP010630-PA [Anopheles gambiae str. PE 0.845 0.106 0.553 8e-32
195124505 1128 GI18427 [Drosophila mojavensis] gi|19391 0.852 0.102 0.528 8e-32
195381111 1124 GJ21512 [Drosophila virilis] gi|19414409 0.852 0.103 0.512 1e-30
194756452 1132 GF13385 [Drosophila ananassae] gi|190621 0.852 0.102 0.495 5e-30
195431924 1146 GK15956 [Drosophila willistoni] gi|19416 0.852 0.101 0.504 5e-30
>gi|91080143|ref|XP_968598.1| PREDICTED: similar to calmodulin-binding protein trpl [Tribolium castaneum] gi|270006411|gb|EFA02859.1| TRP gamma [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 95/121 (78%), Gaps = 2/121 (1%)

Query: 16  KLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYA 75
           KLW+SYF++S TLP PFNIFP  K   K+ GLR+ DK+RK S KR+   R+EKERD++Y 
Sbjct: 676 KLWMSYFEESATLPSPFNIFPKPKHLFKLLGLRKKDKIRKMSTKRRN--REEKERDYKYT 733

Query: 76  AVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKE 135
           AVMRALVWRY+   HR+ + N VTEDDVNE+K +I++ RYEL+ VL+KNGMD SSA+ KE
Sbjct: 734 AVMRALVWRYVSAMHRKLEENAVTEDDVNELKSDISSFRYELLEVLQKNGMDISSAEMKE 793

Query: 136 K 136
           K
Sbjct: 794 K 794




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038655|ref|XP_001847164.1| calmodulin-binding protein trpl [Culex quinquefasciatus] gi|167882363|gb|EDS45746.1| calmodulin-binding protein trpl [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|312374676|gb|EFR22179.1| hypothetical protein AND_15660 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157110448|ref|XP_001651106.1| transient receptor potential channel 4, putative [Aedes aegypti] gi|108878710|gb|EAT42935.1| AAEL005575-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357607162|gb|EHJ65373.1| putative calmodulin-binding protein trpl [Danaus plexippus] Back     alignment and taxonomy information
>gi|158284739|ref|XP_307827.4| AGAP010630-PA [Anopheles gambiae str. PEST] gi|157020898|gb|EAA03611.5| AGAP010630-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195124505|ref|XP_002006733.1| GI18427 [Drosophila mojavensis] gi|193911801|gb|EDW10668.1| GI18427 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195381111|ref|XP_002049298.1| GJ21512 [Drosophila virilis] gi|194144095|gb|EDW60491.1| GJ21512 [Drosophila virilis] Back     alignment and taxonomy information
>gi|194756452|ref|XP_001960491.1| GF13385 [Drosophila ananassae] gi|190621789|gb|EDV37313.1| GF13385 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195431924|ref|XP_002063977.1| GK15956 [Drosophila willistoni] gi|194160062|gb|EDW74963.1| GK15956 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
FB|FBgn0005614 1124 trpl "trp-like" [Drosophila me 0.852 0.103 0.487 1.3e-28
FB|FBgn0032593 1128 trpgamma "trpgamma" [Drosophil 0.838 0.101 0.429 3.1e-23
FB|FBgn0003861 1275 trp "transient receptor potent 0.845 0.090 0.380 3.9e-17
MGI|MGI:109524 975 Trpc5 "transient receptor pote 0.889 0.124 0.364 2.1e-14
UNIPROTKB|F1M176 848 Trpc5 "Protein Trpc5" [Rattus 0.889 0.142 0.357 7.5e-14
UNIPROTKB|F1MTE6 974 TRPC5 "Short transient recepto 0.889 0.124 0.350 9.1e-14
RGD|619787 974 Trpc5 "transient receptor pote 0.889 0.124 0.357 9.1e-14
UNIPROTKB|E9PSM8 974 Trpc5 "Protein Trpc5" [Rattus 0.889 0.124 0.357 9.1e-14
UNIPROTKB|F1PA53 974 TRPC5 "Uncharacterized protein 0.889 0.124 0.350 1.5e-13
UNIPROTKB|F1RWU0 974 TRPC5 "Uncharacterized protein 0.889 0.124 0.350 1.9e-13
FB|FBgn0005614 trpl "trp-like" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 331 (121.6 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 59/121 (48%), Positives = 86/121 (71%)

Query:    16 KLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDSIKRKQQARQEKERDFRYA 75
             KLW+SYF+DS TLPPPFN+ P+ K  +++F      K  K   +++ + R+E+E+   Y 
Sbjct:   689 KLWMSYFEDSATLPPPFNVLPSVKWVIRIFR-----KSSKTIDRQRSKKRKEQEQFSEYD 743

Query:    76 AVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYELMNVLEKNGMDTSSADKKE 135
              +MR+LVWRY+   HR+ + NPV+EDD+NEVK EI  MRYE++ + E +GMD SSA+KKE
Sbjct:   744 NIMRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLEIFENSGMDVSSANKKE 803

Query:   136 K 136
             +
Sbjct:   804 R 804




GO:0005516 "calmodulin binding" evidence=ISS;NAS;IDA;TAS
GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS
GO:0008086 "light-activated voltage-gated calcium channel activity" evidence=NAS;IMP
GO:0007603 "phototransduction, visible light" evidence=IMP
GO:0035997 "rhabdomere microvillus membrane" evidence=IDA
GO:0046982 "protein heterodimerization activity" evidence=IPI
GO:0016028 "rhabdomere" evidence=IDA;NAS;TAS
GO:0009416 "response to light stimulus" evidence=TAS
GO:0019722 "calcium-mediated signaling" evidence=IMP;TAS
GO:0005887 "integral to plasma membrane" evidence=NAS
GO:0005262 "calcium channel activity" evidence=IGI;ISS;IDA
GO:0006816 "calcium ion transport" evidence=ISS;IDA
GO:0070588 "calcium ion transmembrane transport" evidence=IGI
GO:0071454 "cellular response to anoxia" evidence=IGI
GO:0005515 "protein binding" evidence=IPI
GO:0016027 "inaD signaling complex" evidence=IPI
GO:0005261 "cation channel activity" evidence=TAS
GO:0015279 "store-operated calcium channel activity" evidence=NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0007589 "body fluid secretion" evidence=IMP
GO:0007605 "sensory perception of sound" evidence=IMP
FB|FBgn0032593 trpgamma "trpgamma" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0003861 trp "transient receptor potential" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:109524 Trpc5 "transient receptor potential cation channel, subfamily C, member 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1M176 Trpc5 "Protein Trpc5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MTE6 TRPC5 "Short transient receptor potential channel 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|619787 Trpc5 "transient receptor potential cation channel, subfamily C, member 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PSM8 Trpc5 "Protein Trpc5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PA53 TRPC5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RWU0 TRPC5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
TIGR00870743 TIGR00870, trp, transient-receptor-potential calci 9e-15
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein Back     alignment and domain information
 Score = 69.3 bits (170), Expect = 9e-15
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 16  KLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKD-SIKRKQQARQEK------ 68
           KLW+SY  +  T PPPFNI P  K F+ +F   +    +K     R+ +           
Sbjct: 632 KLWMSYEREGGTCPPPFNIIPGPKSFVGLFKRIEKHDGKKRQRWCRRVEEVNWTTWERKA 691

Query: 69  ----ERDFRYAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYE 116
               E    Y  VM+ L+ RY+  + R  D    TE++  E+K +I+++R+E
Sbjct: 692 ETLIEDGLHYQRVMKRLIKRYVLAEQRPRDDEGTTEEETKELKQDISSLRFE 743


The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 136
TIGR00870743 trp transient-receptor-potential calcium channel p 99.94
KOG3609|consensus822 99.94
KOG3614|consensus 1381 93.16
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
Probab=99.94  E-value=2.2e-27  Score=213.61  Aligned_cols=112  Identities=30%  Similarity=0.551  Sum_probs=88.9

Q ss_pred             CCccccchhhhhHHHHHhcCCCCCCCCcccccChHHHHHHHhhhhhhcccccc-HHH-HH--------HHHH-hhhhhhh
Q psy7032           5 RQIDKMRKDSIKLWLSYFDDSPTLPPPFNIFPTTKMFLKMFGLRQIDKMRKDS-IKR-KQ--------QARQ-EKERDFR   73 (136)
Q Consensus         5 ~~~~eWKFaRtkLwmsyf~~~~tlPpPFNliPspk~~~~l~~~~~~~~~~~~s-~~r-~~--------~~~~-~~~~~~~   73 (136)
                      +++.||||+|+++||+|++.+.|+||||||||+||+++|++.+..+..+.... ..+ ..        .... ..+.+.+
T Consensus       621 ~~~~~wk~~r~~~~~~y~~~~~~~p~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  700 (743)
T TIGR00870       621 DADEEWKFQRAKLWMSYEREGGTCPPPFNIIPGPKSFVGLFKRIEKHDGKKRQRWCRRVEEVNWTTWERKAETLIEDGLH  700 (743)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCCCceeccchHHHHHHHhhhhcccCcchHhHhhhhhhhccchhhhhhhhccccchh
Confidence            56899999999999999999999999999999999999988665433222110 001 00        0001 1122367


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHhhHHHHHHH
Q psy7032          74 YAAVMRALVWRYICLQHRQADTNPVTEDDVNEVKGEITAMRYE  116 (136)
Q Consensus        74 y~~VMr~LVkRYi~~~qr~~e~~~vtE~dl~EiKQDISslRyE  116 (136)
                      |+++|++||+|||++++++.+++++||||++||||||||||||
T Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  743 (743)
T TIGR00870       701 YQRVMKRLIKRYVLAEQRPRDDEGTTEEETKELKQDISSLRFE  743 (743)
T ss_pred             HHHHHHhhhhhhhhhhccccccCCCChhhHHHHHHHhhhccCC
Confidence            9999999999999999999999999999999999999999997



after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG3609|consensus Back     alignment and domain information
>KOG3614|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00