Psyllid ID: psy7112

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPDSTQEHLRSTFETVSLTSAYSETVQA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccHHHHcHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHccHHHHHHHHHHcccccHHccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MDAQQFLLMRLESGNLSNIKNALKTFIEansdsftfptldrdklDKLYSLVFNILCnpmysecyIDCLSCLKLLFRDSKYLDELISQERFNILLQTARlyntqptpssleqlgsgagegeshnADALLTIITYLHEElasrvpspgttptsssgtvdhilPVLHVLSEAARHHKALRRLIRNQilparrdfssrpeegdSLLSHLTRCLssgntmlrDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGllgcqnkgqysssseesdteeylrvkdninpvtgvyeppkpdstqehlRSTFETVSLTSAYSETVQA
Flexible Loop (DISEMBL)
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRLIrnqilparrdfssrpeegdsLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQYSssseesdteeylrVKDNINPVTGVYEPPKPDSTQEHLRSTFEtvsltsaysetvqa
Low Complexity Region (SEG)
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVpspgttptsssgtVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYgnaagmlaargllgCQNKGQYsssseesdteeYLRVKDNINPVTGVYEPPKPDSTQEHLRSTFETVSLTSAYSETVQA
Disordered region (IsUnstruct)
******LLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYN***********************DALLTIITYLHEEL*****************VDHILPVLHVLSEAARHHKALRRLIRNQIL****************LSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQ**************************************************************
Disordered Region (DISOPRED)
***QQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSL****SG*GEGESHNADALLTIITYLHEELASRVPS******SSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARR**********SLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLA**********************************VT*********************VSLTSAYSETV**
Disordered Region (DISEMBL)
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTP*************ESHNADALLTIITYLHEELAS*************GTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQ****************YLRVKDNINPVTGVYEPP*********RSTFETVSLT*********
Disordered Region (DISPRO)
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLG***************TEEYLRVKDNINPVTGVYEPP***STQEHLRSTFETVSLTSAYSETVQ*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPDSTQEHLRSTFETVSLTSAYSETVQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q6P4W7	539	Synembryn-A OS=Xenopus tr	yes	N/A	0.423	0.250	0.503	7e-34
Q642H7	548	Synembryn-A OS=Danio reri	no	N/A	0.432	0.251	0.5	2e-33
Q5ZL77	539	Synembryn-A OS=Gallus gal	yes	N/A	0.595	0.352	0.380	2e-33
Q45TX8	539	Synembryn-A OS=Xenopus la	N/A	N/A	0.539	0.319	0.405	3e-33
Q3TIR3	530	Synembryn-A OS=Mus muscul	yes	N/A	0.489	0.294	0.456	5e-32
Q6DRJ9	536	Synembryn-B OS=Danio reri	no	N/A	0.482	0.287	0.474	7e-32
Q5R8F5	530	Synembryn-A OS=Pongo abel	yes	N/A	0.617	0.371	0.363	2e-31
Q9NPQ8	531	Synembryn-A OS=Homo sapie	yes	N/A	0.489	0.293	0.443	3e-31
Q5E9J8	530	Synembryn-A OS=Bos taurus	yes	N/A	0.617	0.371	0.368	3e-31
Q4R720	530	Synembryn-A OS=Macaca fas	N/A	N/A	0.489	0.294	0.443	3e-31

>sp|Q6P4W7|RIC8A_XENTR Synembryn-A OS=Xenopus tropicalis GN=ric8a PE=2 SV=1

 Score =  144 bits (364), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/137 (50%), Positives = 100/137 (72%), Gaps = 2/137 (1%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL++L+E++R H+  R+ +R ++LP  RD  +RPE G++L + L R ++  +T ++ 
Sbjct: 339 LTPVLNLLTESSRVHRETRKFLRAKVLPPLRDVKNRPEVGNTLRNKLVRLMTHVDTDVKH 398

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
           C A+ LFVLCKEN +R +KYTGYGNAAG+LAARGLL G + +G+Y S  E++DTEEY   
Sbjct: 399 CAAEFLFVLCKENVSRFVKYTGYGNAAGLLAARGLLAGGRGEGRY-SEDEDTDTEEYREA 457

Query: 278 KDNINPVTGVYEPPKPD 294
           K NINPVTG  E  +P+
Sbjct: 458 KPNINPVTGRVEEKQPN 474

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein.
Xenopus tropicalis (taxid: 8364)

>sp|Q642H7|RIC8A_DANRE Synembryn-A OS=Danio rerio GN=ric8a PE=2 SV=1

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 101/140 (72%), Gaps = 2/140 (1%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           +LP L++L+E+AR H+  R+ +RN++LP  RD  +RPE G++L + L R ++  +T ++ 
Sbjct: 343 LLPSLNLLTESARIHRETRKFLRNKVLPPLRDVKNRPEVGNALRNKLVRLMTHIDTDVKH 402

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
           C A+ LFVLCKE+ +R IKYTGYGNAAG+LAARGL+ G ++ G Y S  E+SDTEEY   
Sbjct: 403 CAAEFLFVLCKESVSRFIKYTGYGNAAGLLAARGLMRGGRDPGHY-SEDEDSDTEEYREA 461

Query: 278 KDNINPVTGVYEPPKPDSTQ 297
           K +INPVTG  E  +P+  +
Sbjct: 462 KPHINPVTGRVEEEQPNPME 481

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein.

Danio rerio (taxid: 7955)

>sp|Q5ZL77|RIC8A_CHICK Synembryn-A OS=Gallus gallus GN=RIC8A PE=2 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 23/213 (10%)

Query: 106 PSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHV 165
           P SLE +G         N DA+  ++ +L   L                  + + PVL++
Sbjct: 305 PGSLEYMGV--------NMDAVNILLDFLERRL-----------DRGHKLKESLTPVLNL 345

Query: 166 LSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLF 225
           L+E+AR H+  R+ ++ ++LP  RD  +RPE G+SL + L R ++  +T ++ C A+ LF
Sbjct: 346 LTESARVHRQTRKFLKAKVLPPLRDVKNRPEVGNSLRNKLVRLMTHIDTDVKHCAAEFLF 405

Query: 226 VLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRVKDNINPV 284
           VLCKE+ +R +KYTGYGNAAG+LAARGL+ G + +G+Y S  E++DTEEY   K NINPV
Sbjct: 406 VLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEY-SEDEDTDTEEYKEAKPNINPV 464

Query: 285 TGVYEP--PKPDSTQEHLRSTFETVSLTSAYSE 315
           TG  E   P P       +  +E + L + + +
Sbjct: 465 TGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDK 497

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein.

Gallus gallus (taxid: 9031)

>sp|Q45TX8|RIC8A_XENLA Synembryn-A OS=Xenopus laevis GN=ric8a PE=2 SV=2

 Score =  142 bits (358), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 13/185 (7%)

Query: 111 QLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAA 170
           ++  G+ E    N D +  ++ +LH  L                  + + PVL++L+E++
Sbjct: 302 KVEQGSVEYMGMNMDTVEVLLQFLHRRL-----------DRGHKLREMLTPVLNLLTESS 350

Query: 171 RHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKE 230
           R H+  R+ +R ++LP  RD  +RPE G++L + L R ++  +T ++ C A+ LFVLCKE
Sbjct: 351 RVHRETRKFLRAKVLPPLRDVKNRPEVGNTLRNKLVRLMTHVDTDVKHCAAEFLFVLCKE 410

Query: 231 NPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYE 289
           N +R +KYTGYGNAAG+LAARGLL G + +G Y S  +++DTEEY   K NINPVTG  E
Sbjct: 411 NVSRFVKYTGYGNAAGLLAARGLLAGGRGEGCY-SEDDDTDTEEYREAKANINPVTGRVE 469

Query: 290 PPKPD 294
             +P+
Sbjct: 470 EKQPN 474

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein.

Xenopus laevis (taxid: 8355)

>sp|Q3TIR3|RIC8A_MOUSE Synembryn-A OS=Mus musculus GN=Ric8a PE=1 SV=2

 Score =  138 bits (348), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 102/160 (63%), Gaps = 4/160 (2%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL+VL+E AR H+  R+ ++ Q+LP  RD  +RPE GD L + L R ++  +T ++ 
Sbjct: 330 VAPVLNVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGDLLRNKLVRLMTHLDTDVKR 389

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
             A+ LFVLC E+  R IKYTGYGNAAG+LAARGL+ G + +GQY S  E++DTEEY   
Sbjct: 390 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQY-SEDEDTDTEEYREA 448

Query: 278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
           K +INPVTG  E  PP P       +   E + L + + +
Sbjct: 449 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDK 488

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein, possibly leading to release G(i)-alpha-GTP and NuMA proteins from the NuMA-GPSM2-G(i)-alpha-GDP complex. Also acts as an activator for G(q)-alpha (GNAQ) protein by enhancing the G(q)-coupled receptor-mediated ERK activation.

Mus musculus (taxid: 10090)

>sp|Q6DRJ9|RIC8B_DANRE Synembryn-B OS=Danio rerio GN=ric8b PE=2 SV=1

 Score =  138 bits (347), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 102/158 (64%), Gaps = 4/158 (2%)

Query: 161 PVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCC 220
           PVL +L+E+AR+H+ +RR I+ QILP  +D   RPE GD++ + L R ++  +  ++   
Sbjct: 342 PVLSLLTESARYHREIRRYIKAQILPPLKDVKERPEIGDTIRNKLVRLMTHVDMAVKQGA 401

Query: 221 ADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRVKD 279
           A+ LFVLCKE+   L+KYTGYGNAAG+L ARGLL G + + QY SS E+SDTEEY  VK 
Sbjct: 402 AEFLFVLCKESVDNLLKYTGYGNAAGLLMARGLLAGGRGETQY-SSDEDSDTEEYKSVKP 460

Query: 280 NINPVTGVYEPPKPDSTQEHL--RSTFETVSLTSAYSE 315
            INP+TG  E P P+   E    +  +E   L S   E
Sbjct: 461 FINPITGHVEDPLPNPLDEMTEEQKEYEAQRLVSMIDE 498

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP.

Danio rerio (taxid: 7955)

>sp|Q5R8F5|RIC8A_PONAB Synembryn-A OS=Pongo abelii GN=RIC8A PE=2 SV=1

 Score =  136 bits (343), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 23/220 (10%)

Query: 99  LYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDH 158
           L+  +P   S+E +G         N D +  ++ +L + L             +    + 
Sbjct: 289 LFTLEPHGDSVEFMGV--------NMDVIRALLIFLEKRLHQ-----------THRLKES 329

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL VL+E AR H+  R+ ++ Q+LP  RD  +RPE G+ L + L R ++  +T ++ 
Sbjct: 330 VAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHLDTDVKR 389

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
             A+ LFVLC E+  R IKYTGYGNAAG+LAARGL+ G + +GQY S  E++DT+EY   
Sbjct: 390 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQY-SEDEDTDTDEYKEA 448

Query: 278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
           K +INPVTG  E  PP P       +   E + L + + +
Sbjct: 449 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVTMFDK 488

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein, possibly leading to release G(i)-alpha-GTP and NuMA proteins from the NuMA-GPSM2-G(i)-alpha-GDP complex. Also acts as an activator for G(q)-alpha (GNAQ) protein by enhancing the G(q)-coupled receptor-mediated ERK activation.

Pongo abelii (taxid: 9601)

>sp|Q9NPQ8|RIC8A_HUMAN Synembryn-A OS=Homo sapiens GN=RIC8A PE=1 SV=3

 Score =  135 bits (341), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 4/160 (2%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL VL+E AR H+  R+ ++ Q+LP  RD  +RPE G+ L + L R ++  +T ++ 
Sbjct: 331 VAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHLDTDVKR 390

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
             A+ LFVLC E+  R IKYTGYGNAAG+LAARGL+ G + +GQY S  E++DT+EY   
Sbjct: 391 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQY-SEDEDTDTDEYKEA 449

Query: 278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
           K +INPVTG  E  PP P       +   E + L + + +
Sbjct: 450 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVTMFDK 489

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein, possibly leading to release G(i)-alpha-GTP and NuMA proteins from the NuMA-GPSM2-G(i)-alpha-GDP complex (By similarity). Also acts as an activator for G(q)-alpha (GNAQ) protein by enhancing the G(q)-coupled receptor-mediated ERK activation.

Homo sapiens (taxid: 9606)

>sp|Q5E9J8|RIC8A_BOVIN Synembryn-A OS=Bos taurus GN=RIC8A PE=2 SV=1

 Score =  135 bits (341), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 23/220 (10%)

Query: 99  LYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDH 158
           L   +P   SLE LG         N D +  +++++ + L             +    + 
Sbjct: 289 LLTLEPHEGSLEFLGV--------NMDVIRVLLSFMEKRL-----------HQTHRLKES 329

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL VL+E AR H+  R+ ++ Q+LP  RD  +RPE G+ L + L R ++  +T ++ 
Sbjct: 330 VAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGELLRNKLVRLMTHLDTDVKR 389

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
             A+ LFVLC E+  R IKYTGYGNAAG+LAARGL+ G + +GQY S  E++DT+EY   
Sbjct: 390 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQY-SEDEDTDTDEYKEA 448

Query: 278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
           K +INPVTG  E  PP P       +   E + L + + +
Sbjct: 449 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDK 488

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein, possibly leading to release G(i)-alpha-GTP and NuMA proteins from the NuMA-GPSM2-G(i)-alpha-GDP complex. Also acts as an activator for G(q)-alpha (GNAQ) protein by enhancing the G(q)-coupled receptor-mediated ERK activation.

Bos taurus (taxid: 9913)

>sp|Q4R720|RIC8A_MACFA Synembryn-A OS=Macaca fascicularis GN=RIC8A PE=2 SV=1

 Score =  135 bits (341), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 4/160 (2%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           + PVL VL+E AR H+  R+ ++ Q+LP  RD  +RPE G+ L + L R ++  +T ++ 
Sbjct: 330 VAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHLDTDVKR 389

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLL-GCQNKGQYSSSSEESDTEEYLRV 277
             A+ LFVLC E+  R IKYTGYGNAAG+LAARGL+ G + +GQY S  E++DT+EY   
Sbjct: 390 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQY-SEDEDTDTDEYKEA 448

Query: 278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
           K +INPVTG  E  PP P       +   E + L + + +
Sbjct: 449 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVTMFDK 488

Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins. Able to activate GNAI1, GNAO1 and GNAQ, but not GNAS by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein, possibly leading to release G(i)-alpha-GTP and NuMA proteins from the NuMA-GPSM2-G(i)-alpha-GDP complex. Also acts as an activator for G(q)-alpha (GNAQ) protein by enhancing the G(q)-coupled receptor-mediated ERK activation.

Macaca fascicularis (taxid: 9541)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
47228178	621	unnamed protein product [Tetraodon nigro	0.545	0.280	0.447	3e-37
391336659	522	PREDICTED: synembryn-A-like [Metaseiulus	0.438	0.268	0.560	3e-37
410895939	552	PREDICTED: synembryn-A-like [Takifugu ru	0.545	0.315	0.437	3e-36
158298340	538	AGAP010793-PA [Anopheles gambiae str. PE	0.702	0.416	0.390	3e-35
348501938	505	PREDICTED: synembryn-A-like [Oreochromis	0.510	0.322	0.458	3e-34
312380420	557	hypothetical protein AND_07552 [Anophele	0.746	0.427	0.375	8e-34
326666042	552	PREDICTED: synembryn-A-like [Danio rerio	0.539	0.311	0.433	2e-33
91095203	465	PREDICTED: similar to AGAP010793-PA [Tri	0.429	0.294	0.521	8e-33
427780941	396	Putative signaling protein ric-8/synembr	0.539	0.434	0.458	1e-32
322790233	534	hypothetical protein SINV_06896 [Solenop	0.420	0.250	0.514	1e-32

>gi|47228178|emb|CAG07573.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/192 (44%), Positives = 120/192 (62%), Gaps = 18/192 (9%)

Query: 112 LGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAAR 171
           L  G+ +    N D + T++ ++   L            S     + + P+L++L+E+ R
Sbjct: 365 LEPGSEQCRGVNMDCVHTLVLFMERRL-----------ESGEKMKEKLTPILNLLTESCR 413

Query: 172 HHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKEN 231
            H+  RR I+N ILP  RD + RPEEG ++ S L R ++  +T L+ C ADL+FVLCKEN
Sbjct: 414 AHRETRRYIKNHILPPLRDVTHRPEEGTTMKSRLIRLMTHLDTDLKHCAADLIFVLCKEN 473

Query: 232 PARLIKYTGYGNAAGMLAARGLLGCQN------KGQYSSSSEESDTEEYLRVKDNINPVT 285
            +R +K+TGYGNAAG+LA+RGLLG Q       +GQYSS S +SDTEEY +VKD INPVT
Sbjct: 474 VSRFVKHTGYGNAAGLLASRGLLGGQGLRTLSPEGQYSSDS-DSDTEEYRKVKDRINPVT 532

Query: 286 GVYEPPKPDSTQ 297
           G  E P+PD  +
Sbjct: 533 GRVESPQPDPME 544

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391336659|ref|XP_003742696.1| PREDICTED: synembryn-A-like [Metaseiulus occidentalis]

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 103/141 (73%), Gaps = 1/141 (0%)

Query: 159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
           ++PVL  LS+AAR  + +R+ ++ +ILP  +D  +RPEEGD+L + L R ++S  T ++ 
Sbjct: 322 LVPVLVALSQAARSSRVIRKYVKARILPPLKDVMNRPEEGDTLRNKLVRLMTSPLTEVKC 381

Query: 219 CCADLLFVLCKENPARLIKYTGYGNAAGMLAARGL-LGCQNKGQYSSSSEESDTEEYLRV 277
             ADLLFVLCKE   RLIKYTGYGNAAG+LA RGL LG +  G +SS SE+SDTEEY++ 
Sbjct: 382 TAADLLFVLCKEKVGRLIKYTGYGNAAGLLANRGLMLGGRGNGHFSSESEDSDTEEYVKY 441

Query: 278 KDNINPVTGVYEPPKPDSTQE 298
           KDNINPV G YE PKP+   E
Sbjct: 442 KDNINPVLGCYEEPKPNPIDE 462

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410895939|ref|XP_003961457.1| PREDICTED: synembryn-A-like [Takifugu rubripes]

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 18/192 (9%)

Query: 112 LGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAAR 171
           +G G+ +    N D + T++ ++   L S                + + P+L++L+E+ R
Sbjct: 305 VGPGSEQCLGVNMDCVHTLVLFMERRLES-----------GEKMKEKLTPILNLLTESCR 353

Query: 172 HHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKEN 231
            H+  RR I+  ILP  RD + RPEEG ++ S L R ++  +T L+ C ADL+FVLCKEN
Sbjct: 354 AHRETRRYIKKHILPPLRDVTHRPEEGTTVKSRLIRLMTHLDTDLKHCAADLIFVLCKEN 413

Query: 232 PARLIKYTGYGNAAGMLAARGLLGCQN------KGQYSSSSEESDTEEYLRVKDNINPVT 285
            +R +K+TGYGNAAG+LA+RGLLG         +GQYSS S +SDTEEY +VKD INPVT
Sbjct: 414 VSRFVKHTGYGNAAGLLASRGLLGGHGLRTSSPEGQYSSDS-DSDTEEYRKVKDRINPVT 472

Query: 286 GVYEPPKPDSTQ 297
           G  E P+PD  +
Sbjct: 473 GRVESPQPDPME 484

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|158298340|ref|XP_318515.3| AGAP010793-PA [Anopheles gambiae str. PEST] gi|157014354|gb|EAA13709.3| AGAP010793-PA [Anopheles gambiae str. PEST]

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 141/266 (53%), Gaps = 42/266 (15%)

Query: 32  DSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFN 91
           D F + TL+RDK+  L+S + N+L +   S CY++ +S L      SK            
Sbjct: 247 DLFFYRTLNRDKIVLLHSNIVNLLTSVPVS-CYVELVSSLH-----SKL----------- 289

Query: 92  ILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTS 151
                    ++  TP +     S     E++N   L  ++ +L +               
Sbjct: 290 ---------DSASTPGA-----STVVPFEANNVYVLHVLVEFLRKNFQK--------AEK 327

Query: 152 SSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSS 211
            S   + + P+L VL +A R     RR +R+ ILP  RD   RPE G  L +HL   L+S
Sbjct: 328 KSDQYELLSPILTVLIKAVRADGVHRRYVRSIILPPLRDVRDRPEVGKELRNHLCSLLTS 387

Query: 212 GNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQ--NKG-QYSSSSEE 268
             T + D  A+LLFVLCKEN  R+IKYTGYGNAAG+ A RGLLG +  N G QYSS SE+
Sbjct: 388 PCTQIADLSAELLFVLCKENVGRMIKYTGYGNAAGLFANRGLLGGRTGNGGEQYSSDSED 447

Query: 269 SDTEEYLRVKDNINPVTGVYEPPKPD 294
           SDTEEY +++  INPV G YEPPKP+
Sbjct: 448 SDTEEYKQIQHAINPVIGCYEPPKPN 473

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348501938|ref|XP_003438526.1| PREDICTED: synembryn-A-like [Oreochromis niloticus]

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 110/179 (61%), Gaps = 16/179 (8%)

Query: 120 ESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRL 179
           E  N D + T++ ++   L +                + + P+L++L+E+ R H+  R  
Sbjct: 313 EGVNMDCVHTLLMFMERRLEA-----------GDKIKEKLTPILNLLTESCRAHRETRHY 361

Query: 180 IRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYT 239
           IR  ILP  RD S RPEEG ++ S L R ++  +T L+ C ADL+FVLCKEN  R +KYT
Sbjct: 362 IRKYILPPLRDVSQRPEEGTTVKSRLIRLMTHLDTDLKHCAADLIFVLCKENVRRFVKYT 421

Query: 240 GYGNAAGMLAARGLLGCQ----NKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPD 294
           GYGNAAG+LA RGLLG Q    +  QYSS S +SDTEEY +V+D INPVTG  E  +PD
Sbjct: 422 GYGNAAGLLATRGLLGGQGPRTSDTQYSSDS-DSDTEEYRQVRDRINPVTGRVEAVQPD 479

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|312380420|gb|EFR26418.1| hypothetical protein AND_07552 [Anopheles darlingi]

 Score =  150 bits (379), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 143/269 (53%), Gaps = 31/269 (11%)

Query: 32  DSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKYLDELISQERFN 91
           D F + TL+RD++  L+S + N+L +   S CY++ ++ L+   +      +  +QE+  
Sbjct: 249 DLFFYRTLNRDRIVSLHSNIVNLLTSVPVS-CYVELVTPLQQQQQQHLQAKQDDAQEK-- 305

Query: 92  ILLQTARLYNTQPTPSSLEQLGSGAGEG---ESHNADALLTIITYLHEELASRVPSPGTT 148
                            +++ GS        E  N   L  ++ +L              
Sbjct: 306 --------------QQEVDEEGSNTIHTVPFEGRNVYVLQVLVDFLRRNFQR-------- 343

Query: 149 PTSSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRC 208
               S   + + PVL VL +A R     RR +R+ ILP  RD   RPE G  L ++L   
Sbjct: 344 AEKKSDQYEMLSPVLTVLIKAIRADAIHRRYVRSVILPPLRDVHDRPEVGKELRNYLCSL 403

Query: 209 LSSGNTMLRDCCADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQN-KG--QYSSS 265
           L+S  T + D  A+LLFVLCKEN  R+IKYTGYGNAAG+ A RGLLG ++ KG  QYSS 
Sbjct: 404 LTSPCTQIADLSAELLFVLCKENVGRMIKYTGYGNAAGLFANRGLLGGRSTKGSEQYSSD 463

Query: 266 SEESDTEEYLRVKDNINPVTGVYEPPKPD 294
           SE+SDTEEY +++  INPV G YEPPKP+
Sbjct: 464 SEDSDTEEYKQLQHAINPVIGCYEPPKPN 492

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326666042|ref|XP_685996.4| PREDICTED: synembryn-A-like [Danio rerio]

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 15/187 (8%)

Query: 111 QLGSGAGEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAA 170
           +L  G+ E    N D + T++ ++ + L                  + + PVL++L+E++
Sbjct: 307 RLSEGSEESGGVNMDCVHTLLLFMEKRL-----------DRGHKLKEKLTPVLNLLTESS 355

Query: 171 RHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKE 230
           + H+  R  +R QILP  RD   RPE+G++L S L R ++  +T ++ C A+LLFVLCKE
Sbjct: 356 KAHRETRHYLRQQILPPLRDVELRPEQGNTLRSRLVRLMTHVDTDIKHCAAELLFVLCKE 415

Query: 231 NPARLIKYTGYGNAAGMLAARGLL---GCQNKGQYSSSSEESDTEEYLRVKDNINPVTGV 287
           N +R +KYTGYGNAAG+LAARGLL   G   + QYSS S +SDTEEY + +D INPVTG 
Sbjct: 416 NVSRFVKYTGYGNAAGLLAARGLLNGRGSSPQPQYSSDS-DSDTEEYRQARDRINPVTGR 474

Query: 288 YEPPKPD 294
            E  +PD
Sbjct: 475 VEEEQPD 481

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|91095203|ref|XP_967869.1| PREDICTED: similar to AGAP010793-PA [Tribolium castaneum] gi|270015971|gb|EFA12419.1| hypothetical protein TcasGA2_TC010229 [Tribolium castaneum]

 Score =  147 bits (370), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 100/140 (71%), Gaps = 3/140 (2%)

Query: 161 PVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCC 220
           PV+ +L ++A   +A+R+ +R QILP  +D  SRPE+G +L +HL R L++  T LRD  
Sbjct: 262 PVVTILLKSANSERAIRKYLRLQILPPLKDVHSRPEQGSTLRNHLCRLLTTPITQLRDLV 321

Query: 221 ADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQ-NKGQ--YSSSSEESDTEEYLRV 277
           ADLLF+LCK++  R+IKYTGYGNAAG+ A RGLLG + ++G+  YSS SE S+TEEY   
Sbjct: 322 ADLLFILCKKSVKRMIKYTGYGNAAGLFAKRGLLGGRSDRGEADYSSGSEGSETEEYAEF 381

Query: 278 KDNINPVTGVYEPPKPDSTQ 297
           K  INPV G YE P P++ +
Sbjct: 382 KHGINPVIGCYEEPHPNAME 401

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427780941|gb|JAA55922.1| Putative signaling protein ric-8/synembryn regulates neurotransmitter secretion [Rhipicephalus pulchellus]

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/181 (45%), Positives = 108/181 (59%), Gaps = 9/181 (4%)

Query: 117 GEGESHNADALLTIITYLHEELASRVPSPGTTPTSSSGTVDHILPVLHVLSEAARHHKAL 176
           G  E +N DA+  ++ YL      R+    T P+        + PVL  L+E  R H+ L
Sbjct: 168 GSFEGYNVDAVAALVAYLER----RLDEVETKPSFYR----QLTPVLLCLAECGRGHRIL 219

Query: 177 RRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLI 236
           RR +R ++LP  +D   RPE G +L + L R ++   T  +   A+LLFVLCKE   RLI
Sbjct: 220 RRYLRARVLPPLKDVMKRPESGSTLRNRLVRLMTVPCTDTKQLAAELLFVLCKEKVGRLI 279

Query: 237 KYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPDST 296
           KYTGYGNAAG+LA RGLLG      YSS SE+SDTEEYLR +D+INPV G +EP +    
Sbjct: 280 KYTGYGNAAGLLARRGLLGATGV-LYSSDSEDSDTEEYLRHRDHINPVLGCHEPVRESPL 338

Query: 297 Q 297
           Q
Sbjct: 339 Q 339

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790233|gb|EFZ15232.1| hypothetical protein SINV_06896 [Solenopsis invicta]

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 95/136 (69%), Gaps = 2/136 (1%)

Query: 161 PVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCC 220
           P++  L    +  + +R+ +R QILP  +D  +RPEEG +L + L + L+S  T LRD  
Sbjct: 332 PIVTALVRLVKSERIIRKYVRLQILPPLKDVMNRPEEGTTLRAKLCKLLTSPITELRDLV 391

Query: 221 ADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQ--YSSSSEESDTEEYLRVK 278
           A+LLFVLCKEN  R++KYTGYGNAAGM A +GLLG  ++ +  YSS SE S+TEEY + K
Sbjct: 392 AELLFVLCKENVNRMVKYTGYGNAAGMFATKGLLGRSHQAETLYSSDSENSETEEYQKYK 451

Query: 279 DNINPVTGVYEPPKPD 294
           + INPVTG +E PKP+
Sbjct: 452 EQINPVTGCFEQPKPN 467

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
UNIPROTKB|Q6P4W7	539	ric8a "Synembryn-A" [Xenopus (	0.485	0.287	0.335	8.7e-30
FB|FBgn0028292	573	ric8a "ric8a" [Drosophila mela	0.510	0.284	0.358	3.7e-29
UNIPROTKB|Q45TX8	539	ric8a "Synembryn-A" [Xenopus l	0.485	0.287	0.335	8.1e-29
UNIPROTKB|F1SPQ2	560	RIC8B "Uncharacterized protein	0.438	0.25	0.314	1.7e-28
UNIPROTKB|Q29IC2	566	ric8a "Synembryn" [Drosophila	0.570	0.321	0.338	1.9e-28
UNIPROTKB|B7WPL0	560	RIC8B "Synembryn-B" [Homo sapi	0.438	0.25	0.314	2.1e-28
ZFIN|ZDB-GENE-040927-18	556	ric8a "resistance to inhibitor	0.489	0.280	0.337	5e-28
UNIPROTKB|Q5ZL77	539	RIC8A "Synembryn-A" [Gallus ga	0.495	0.293	0.327	5.3e-28
UNIPROTKB|F1P2N0	541	RIC8A "Synembryn-A" [Gallus ga	0.495	0.292	0.327	5.4e-28
MGI|MGI:2141866	530	Ric8 "resistance to inhibitors	0.489	0.294	0.343	2.1e-26

UNIPROTKB|Q6P4W7 ric8a "Synembryn-A" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 244 (91.0 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
 Identities = 54/161 (33%), Positives = 87/161 (54%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             + PVL++L+E++R H+  R+ +R ++LP  RD  +RPE G++L + L R ++  +T ++ 
Sbjct:   339 LTPVLNLLTESSRVHRETRKFLRAKVLPPLRDVKNRPEVGNTLRNKLVRLMTHVDTDVKH 398

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYLRV 277
             C A+ LFVLCKEN +R +KYTGY                + +G+Y           Y   
Sbjct:   399 CAAEFLFVLCKENVSRFVKYTGYGNAAGLLAARGLLAGGRGEGRYSEDEDTDTEE-YREA 457

Query:   278 KDNINPVTGVYEPPKP---DSTQEHLRSTFETVSLTSAYSE 315
             K NINPVTG  E  +P   D   E  +  +E + L + + +
Sbjct:   458 KPNINPVTGRVEEKQPNPMDGMTEEQKE-YEAMKLVNMFDK 497

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

FB|FBgn0028292 ric8a "ric8a" [Drosophila melanogaster (taxid:7227)]

 Score = 249 (92.7 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 62/173 (35%), Positives = 83/173 (47%)

Query:   120 ESHNADALLTIITYLHEELASRVXXXXXXXXXXXXXVDHILPVLHVLSEAARHHKALRRL 179
             E  N  +L  ++ YL + LA +               + + PVL VL + AR  + +R  
Sbjct:   340 EKRNVRSLDVLLRYLRQSLAQQEAEASSH--------ELLSPVLTVLVKCARSDRVMRHY 391

Query:   180 IRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYT 239
             +R +ILP  RD S RPE G  L +HL R L+    +LRD  A+LLFVLCKEN  R+IKYT
Sbjct:   392 LRQEILPPLRDVSQRPEVGQELRNHLCRFLTLPAMILRDLSAELLFVLCKENVGRMIKYT 451

Query:   240 GYXXXXXXXXXXXXXXCQN-KG-QYXXXXXXXXXXXYLRVKDNINPVTGVYEP 290
             GY              C+  +G  Y           Y + +  INPV G  EP
Sbjct:   452 GYGNAAGLFAKRGILDCRRVEGTDYSSDSEDSDTEEYKQQQQGINPVLGCVEP 504

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS;NAS

GO:0008105 "asymmetric protein localization" evidence=IMP

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0040001 "establishment of mitotic spindle localization" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0001965 "G-protein alpha-subunit binding" evidence=IPI

GO:0055059 "asymmetric neuroblast division" evidence=IMP

GO:0008356 "asymmetric cell division" evidence=IMP

GO:0010004 "gastrulation involving germ band extension" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0050821 "protein stabilization" evidence=IMP

UNIPROTKB|Q45TX8 ric8a "Synembryn-A" [Xenopus laevis (taxid:8355)]

 Score = 239 (89.2 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
 Identities = 54/161 (33%), Positives = 86/161 (53%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             + PVL++L+E++R H+  R+ +R ++LP  RD  +RPE G++L + L R ++  +T ++ 
Sbjct:   339 LTPVLNLLTESSRVHRETRKFLRAKVLPPLRDVKNRPEVGNTLRNKLVRLMTHVDTDVKH 398

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYLRV 277
             C A+ LFVLCKEN +R +KYTGY                + +G Y           Y   
Sbjct:   399 CAAEFLFVLCKENVSRFVKYTGYGNAAGLLAARGLLAGGRGEGCYSEDDDTDTEE-YREA 457

Query:   278 KDNINPVTGVYEPPKP---DSTQEHLRSTFETVSLTSAYSE 315
             K NINPVTG  E  +P   D   E  +  +E + L + + +
Sbjct:   458 KANINPVTGRVEEKQPNPMDGMTEEQKE-YEAMKLVNMFDK 497

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|F1SPQ2 RIC8B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 211 (79.3 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
 Identities = 44/140 (31%), Positives = 70/140 (50%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             + PVL +L+E +R H+ +R+ +++Q+LP  RD ++RPE G ++ + L R ++  +  ++ 
Sbjct:   363 LTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQ 422

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXCQNKGQYXXXXXXXXXXXYLRVK 278
               A+ LFVLCKE    L+KYTGY                    +           Y   K
Sbjct:   423 IAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAK 482

Query:   279 DNINPVTGVYEPPKPDSTQE 298
              NIN +TG  E P P+   E
Sbjct:   483 PNINLITGHLEEPMPNPIDE 502

GO:0001965 "G-protein alpha-subunit binding" evidence=IEA

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

UNIPROTKB|Q29IC2 ric8a "Synembryn" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 250 (93.1 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
 Identities = 67/198 (33%), Positives = 92/198 (46%)

Query:   120 ESHNADALLTIITYLHEELASRVXXXXXXXXXXXXXVDHILPVLHVLSEAARHHKALRRL 179
             E  N   L  ++ YL + LA +               + + PVL VL + +R  + +R  
Sbjct:   332 EKRNVRCLTVLLNYLRQALAQQEAEASSH--------ELLSPVLTVLVKCSRSDRVMRHY 383

Query:   180 IRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENPARLIKYT 239
             +R +ILP  RD S RPE G  L +HL R L+    +LRD  A+LLFVLCKE+  R+IKYT
Sbjct:   384 LRQEILPPLRDVSQRPEIGQELRNHLCRFLTLPAMILRDLAAELLFVLCKEDVGRMIKYT 443

Query:   240 GYXXXXXXXXXXXXXXCQN-KG-QYXXXXXXXXXXXYLRVKDNINPVTGVYEP-----PK 292
             GY              C+  +G  Y           Y + +  INPV G  EP     P 
Sbjct:   444 GYGNAAGLFAKRGILDCRRVEGADYSSDSEDSDTEEYKKHQQGINPVLGCVEPKSKHNPL 503

Query:   293 PDSTQEHLRS-TFETVSL 309
              D T+E   S   + V+L
Sbjct:   504 DDMTEEQKESEALQLVNL 521

GO:0001965 "G-protein alpha-subunit binding" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0007163 "establishment or maintenance of cell polarity" evidence=ISS

GO:0008105 "asymmetric protein localization" evidence=ISS

GO:0008356 "asymmetric cell division" evidence=ISS

GO:0010004 "gastrulation involving germ band extension" evidence=ISS

GO:0040001 "establishment of mitotic spindle localization" evidence=ISS

GO:0050821 "protein stabilization" evidence=ISS

GO:0055057 "neuroblast division" evidence=ISS

UNIPROTKB|B7WPL0 RIC8B "Synembryn-B" [Homo sapiens (taxid:9606)]

 Score = 211 (79.3 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
 Identities = 44/140 (31%), Positives = 70/140 (50%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             + PVL +L+E +R H+ +R+ +++Q+LP  RD ++RPE G ++ + L R ++  +  ++ 
Sbjct:   363 LTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQ 422

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXCQNKGQYXXXXXXXXXXXYLRVK 278
               A+ LFVLCKE    L+KYTGY                    +           Y   K
Sbjct:   423 IAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAK 482

Query:   279 DNINPVTGVYEPPKPDSTQE 298
              NIN +TG  E P P+   E
Sbjct:   483 PNINLITGHLEEPMPNPIDE 502

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

ZFIN|ZDB-GENE-040927-18 ric8a "resistance to inhibitors of cholinesterase 8 homolog A" [Danio rerio (taxid:7955)]

 Score = 240 (89.5 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
 Identities = 54/160 (33%), Positives = 85/160 (53%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             +LP L++L+E+AR H+  R+ +RN++LP  RD  +RPE G++L + L R ++  +T ++ 
Sbjct:   351 LLPSLNLLTESARIHRETRKFLRNKVLPPLRDVKNRPEVGNALRNKLVRLMTHIDTDVKH 410

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYLRV 277
             C A+ LFVLCKE+ +R IKYTGY                ++ G Y           Y   
Sbjct:   411 CAAEFLFVLCKESVSRFIKYTGYGNAAGLLAARGLMRGGRDPGHYSEDEDSDTEE-YREA 469

Query:   278 KDNINPVTGVYEP--PKPDSTQEHLRSTFETVSLTSAYSE 315
             K +INPVTG  E   P P       +  +E + L + + +
Sbjct:   470 KPHINPVTGRVEEEQPNPMEGMTDEQKEYEAMKLVNMFDK 509

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IEA;ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q5ZL77 RIC8A "Synembryn-A" [Gallus gallus (taxid:9031)]

 Score = 243 (90.6 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
 Identities = 53/162 (32%), Positives = 86/162 (53%)

Query:   157 DHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTML 216
             + + PVL++L+E+AR H+  R+ ++ ++LP  RD  +RPE G+SL + L R ++  +T +
Sbjct:   337 ESLTPVLNLLTESARVHRQTRKFLKAKVLPPLRDVKNRPEVGNSLRNKLVRLMTHIDTDV 396

Query:   217 RDCCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYL 275
             + C A+ LFVLCKE+ +R +KYTGY                + +G+Y           Y 
Sbjct:   397 KHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEE-YK 455

Query:   276 RVKDNINPVTGVYEP--PKPDSTQEHLRSTFETVSLTSAYSE 315
               K NINPVTG  E   P P       +  +E + L + + +
Sbjct:   456 EAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDK 497

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0007193 "adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0042074 "cell migration involved in gastrulation" evidence=IEA

GO:0070586 "cell-cell adhesion involved in gastrulation" evidence=IEA

GO:0071711 "basement membrane organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|F1P2N0 RIC8A "Synembryn-A" [Gallus gallus (taxid:9031)]

 Score = 243 (90.6 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
 Identities = 53/162 (32%), Positives = 86/162 (53%)

Query:   157 DHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTML 216
             + + PVL++L+E+AR H+  R+ ++ ++LP  RD  +RPE G+SL + L R ++  +T +
Sbjct:   339 ESLTPVLNLLTESARVHRQTRKFLKAKVLPPLRDVKNRPEVGNSLRNKLVRLMTHIDTDV 398

Query:   217 RDCCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYL 275
             + C A+ LFVLCKE+ +R +KYTGY                + +G+Y           Y 
Sbjct:   399 KHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEE-YK 457

Query:   276 RVKDNINPVTGVYEP--PKPDSTQEHLRSTFETVSLTSAYSE 315
               K NINPVTG  E   P P       +  +E + L + + +
Sbjct:   458 EAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDK 499

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0007193 "adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0042074 "cell migration involved in gastrulation" evidence=IEA

GO:0070586 "cell-cell adhesion involved in gastrulation" evidence=IEA

GO:0071711 "basement membrane organization" evidence=IEA

MGI|MGI:2141866 Ric8 "resistance to inhibitors of cholinesterase 8 homolog (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 230 (86.0 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
 Identities = 55/160 (34%), Positives = 80/160 (50%)

Query:   159 ILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRD 218
             + PVL+VL+E AR H+  R+ ++ Q+LP  RD  +RPE GD L + L R ++  +T ++ 
Sbjct:   330 VAPVLNVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGDLLRNKLVRLMTHLDTDVKR 389

Query:   219 CCADLLFVLCKENPARLIKYTGYXXXXXXXXXXXXXXC-QNKGQYXXXXXXXXXXXYLRV 277
               A+ LFVLC E+  R IKYTGY                + +GQY           Y   
Sbjct:   390 VAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQYSEDEDTDTEE-YREA 448

Query:   278 KDNINPVTGVYE--PPKPDSTQEHLRSTFETVSLTSAYSE 315
             K +INPVTG  E  PP P       +   E + L + + +
Sbjct:   449 KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDK 488

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001944 "vasculature development" evidence=IMP

GO:0001965 "G-protein alpha-subunit binding" evidence=ISO

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISO

GO:0005096 "GTPase activator activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0007193 "adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway" evidence=IDA

GO:0007369 "gastrulation" evidence=IMP

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=ISO

GO:0008542 "visual learning" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0042074 "cell migration involved in gastrulation" evidence=IMP

GO:0043547 "positive regulation of GTPase activity" evidence=ISO

GO:0070586 "cell-cell adhesion involved in gastrulation" evidence=IMP

GO:0071711 "basement membrane organization" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6P4W7	RIC8A_XENTR	No assigned EC number	0.5036	0.4231	0.2504	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	319
pfam10165	439	pfam10165, Ric8, Guanine nucleotide exchange facto	4e-48

>gnl|CDD|220610 pfam10165, Ric8, Guanine nucleotide exchange factor synembryn

 Score =  166 bits (423), Expect = 4e-48
 Identities = 67/138 (48%), Positives = 92/138 (66%)

Query: 161 PVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCC 220
           P+L +L++  R  + +R+ +R  +LP   D   RPE+GD+L S L R ++S +T L+D  
Sbjct: 261 PLLTLLTKIYRAAEPVRKYLRALLLPPLEDRKKRPEKGDTLRSRLLRLMTSPDTDLKDAA 320

Query: 221 ADLLFVLCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDN 280
           ++LLFVLCKE+ +R IKY GYGNAAG+LA RGLLG    G+  SS E+SDTEEY   K  
Sbjct: 321 SELLFVLCKEDASRFIKYIGYGNAAGLLANRGLLGPGRAGEAYSSDEDSDTEEYKSAKRA 380

Query: 281 INPVTGVYEPPKPDSTQE 298
           INP+TG  EP +  +  E
Sbjct: 381 INPITGQVEPAEKPNPME 398

Ric8 is involved in the EGL-30 neurotransmitter signalling pathway. It is a guanine nucleotide exchange factor that regulates neurotransmitter secretion. Length = 439

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG4464|consensus	532		100.0
PF10165	446	Ric8: Guanine nucleotide exchange factor synembryn	100.0

>KOG4464|consensus

Probab=100.00  E-value=7e-87  Score=651.88  Aligned_cols=317  Identities=33%  Similarity=0.521  Sum_probs=289.9

Q ss_pred             CchhhhHHHHHhcCChhhHHHHHHHHhhhcccccccCCCChhhHHHHHHHHHHHhcCCCCchhHHHHHHHhhhhcCCCCc
Q psy7112           1 MDAQQFLLMRLESGNLSNIKNALKTFIEANSDSFTFPTLDRDKLDKLYSLVFNILCNPMYSECYIDCLSCLKLLFRDSKY   80 (319)
Q Consensus         1 md~~~~~~~~l~~~~~~~i~~~l~~fn~~~~~~f~F~~~~~~~r~~L~~~l~~~L~~~~~~~~~~~cL~~lriLSRDk~~   80 (319)
                      |+.... +..+++|+.+.|..+|+.||.+|++.|+||+.++++|++||+++|++|+++.+++||+.||+|+|||||||++
T Consensus         1 m~~~~~-l~~v~age~~~I~e~l~~~n~k~aa~~kFd~a~~d~r~eL~e~i~~Vle~~~p~t~~v~~LetvrILSRdk~~   79 (532)
T KOG4464|consen    1 MLESDL-LASVEAGEADKIEEFLRKYNFKHAAVFKFDSANSDDRKELGERIFEVLENGEPLTHRVVCLETVRILSRDKDG   79 (532)
T ss_pred             CchHHH-HHHHhcCCchhHHHHHHHhhhhhhhhhcccccchhhHHHHHHHHHHHHhcCCCchhhhhHHHHHHHHhccccc
Confidence            566666 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhcHHHHHHHHHhcCCCCCCC----------------------------------------------------CCCh
Q psy7112          81 LDELISQERFNILLQTARLYNTQP----------------------------------------------------TPSS  108 (319)
Q Consensus        81 L~~~~t~~~~~~L~~~A~l~~~~~----------------------------------------------------~~~~  108 (319)
                      |+|+++++.+++|+++|.|...+.                                                    +|++
T Consensus        80 L~~~~~~q~~~~ll~~A~ls~~e~sl~~v~d~~vi~EslKCLcNlvf~Sq~~q~~~~~~~~~~~ll~~v~~~~er~~~~~  159 (532)
T KOG4464|consen   80 LEPLTNDQLCQKLLALAELSSNENSLPTVADMHVIMESLKCLCNLVFHSQRAQDLFLENPLTGKLLQRVLGEFERNFPKD  159 (532)
T ss_pred             cccccchHHHHHHHHHHHhccccCCCCcccchHHHHHHHHHHHHHHhccHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence            999999999999999999976553                                                    7777


Q ss_pred             HH-------------------HH--------------hhhhCCC-----C---chhHHHH---H----------------
Q psy7112         109 LE-------------------QL--------------GSGAGEG-----E---SHNADAL---L----------------  128 (319)
Q Consensus       109 v~-------------------~l--------------~~~l~~~-----~---~~~~~~~---L----------------  128 (319)
                      ++                   ||              +..+|..     |   ||++|+|   |                
T Consensus       160 ~~~~dlrLLflltale~~~Rsql~~~l~Gl~~lt~~led~lgidse~n~~~l~pqe~n~a~EaLK~~FNvt~~~~k~~ke  239 (532)
T KOG4464|consen  160 SSIFDLRLLFLLTALETDHRSQLIAELLGLELLTNWLEDKLGIDSEINVPPLNPQETNRACEALKVFFNVTCDSDKDVKE  239 (532)
T ss_pred             chhhHHHHHHHHHHhhHHHHHHHHHHhcccHHHHHHhhccccCCCCcCCCCCCHHHHHHHHHHHHHHhheeeccccccch
Confidence            66                   11              4445522     2   3999999   3                


Q ss_pred             -------HHHHHHHHHH-------------------hhcCCCCC-----CCCCC--------------------------
Q psy7112         129 -------TIITYLHEEL-------------------ASRVPSPG-----TTPTS--------------------------  151 (319)
Q Consensus       129 -------~l~~il~~~l-------------------l~~~p~~~-----~~~~~--------------------------  151 (319)
                             ||++++|||+                   |.|+|...     ....+                          
T Consensus       240 ~~~~~~r~l~~llr~cl~~vT~~~~~~elhshav~~L~nv~~k~~~~~~~~~p~E~~sq~f~~~n~~~mdVi~~lLn~~~  319 (532)
T KOG4464|consen  240 EHAIQARHLTILLRHCLLIVTLRDSTEELHSHAVNLLDNVPEKCLDVLAGAKPHECCSQCFEKRNGRNMDVILRLLNFSE  319 (532)
T ss_pred             hhHHHHHHHHHHHHHHHhhccccchHHHHhhccCCccCCchhhhhhcccCCCCcchHHHHHHHhcchhHHHHHHHHHhhH
Confidence                   8999999998                   56666551     11222                          


Q ss_pred             -----CCCCccchhhHHHHHHHHHHhcHHHHHHHHhhcCCCCccccCCCCCCCcchhhHhhhccCCCcchHHHHHHHHHH
Q psy7112         152 -----SSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFV  226 (319)
Q Consensus       152 -----~~~l~e~l~PlL~lL~~~~~a~~~~Rk~lr~~lLP~~~Dr~~~pe~g~tLrsrLlRLmT~~~~~lk~~vaelLFv  226 (319)
                           ++++.|.++|+|+||+++|++++.+|||+|.+||||++||++|||+|.+|||||+|+||+|+..+|+.+|||||+
T Consensus       320 ~qq~~~ss~~EllsPvlsVL~~car~~R~~Rkylr~qVLPPLrDV~~RPEvg~tLRnkl~Rlmtl~~~~~K~vaAEfLFv  399 (532)
T KOG4464|consen  320 KQQEKESSLHELLSPVLSVLTECARSHRVMRKYLRQQVLPPLRDVSQRPEVGQTLRNKLVRLMTLPDSSVKDVAAEFLFV  399 (532)
T ss_pred             HHHhhhhhhhhhhhhHHHHHHHHHhhhHHHHHHHHHhcCCchhhhhcCcchhHHHHHhhHhheeccchhhhhhhHHHHHH
Confidence                 578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCChhhhHhhccccchhHHHHHhCcCCCCCCCCCCCCCCCcchHHhhhcCCCCCCcccccCCCCCCCCCCCChhhHh-
Q psy7112         227 LCKENPARLIKYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPDSTQEHLRSTFE-  305 (319)
Q Consensus       227 LC~ed~~rfvk~~GYGnAAG~La~rGll~~~~~~~~~S~sedSdTEey~~~~~~INPITG~~e~~~~~p~e~MTeEEKE-  305 (319)
                      |||++++||+||||||||||+||+||++++++.+.|||+|||||||||+++++.||||||+++++.|+||+|||||||| 
T Consensus       400 LCKesV~rmIKYtGyGnaAGllA~rGll~~~r~e~~~Se~EDtdTeeYkq~k~sINpVtG~ve~~~~n~ld~mtEEQKEy  479 (532)
T KOG4464|consen  400 LCKESVNRMIKYTGYGNAAGLLAARGLLAGGRQEKHYSEDEDTDTEEYKQAKDSINPVTGAVEESDPNPLDGMTEEQKEY  479 (532)
T ss_pred             HhhcchhhhhhhcccccHHHHHHhhhhhccCCCccCcccccccchHHHHhhcccCCccccccCCCCCChhhhhhhHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999986 


Q ss_pred             -HHHHHHHhhhhhh
Q psy7112         306 -TVSLTSAYSETVQ  318 (319)
Q Consensus       306 -~~~l~~~~~~~~~  318 (319)
                       +|+|+|.|+|--+
T Consensus       480 EAMkLVnm~dkl~~  493 (532)
T KOG4464|consen  480 EAMKLVNMMDKLSR  493 (532)
T ss_pred             HHHHHHHHHHHHHh
Confidence             6999999998643

>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway []

Probab=100.00  E-value=3.3e-65  Score=506.91  Aligned_cols=163  Identities=43%  Similarity=0.678  Sum_probs=149.9

Q ss_pred             CCCccchhhHHHHHHHHHHhcHHHHHHHHhhcCCCCccccCCCCCCCcchhhHhhhccCCCcchHHHHHHHHHHHhcCCh
Q psy7112         153 SGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSRPEEGDSLLSHLTRCLSSGNTMLRDCCADLLFVLCKENP  232 (319)
Q Consensus       153 ~~l~e~l~PlL~lL~~~~~a~~~~Rk~lr~~lLP~~~Dr~~~pe~g~tLrsrLlRLmT~~~~~lk~~vaelLFvLC~ed~  232 (319)
                      .++++.++|+|++|+++|++++.+|+|||++||||++||+.|||+|+|||||||||||+|.+++|++||||||+||||||
T Consensus       261 ~~l~~~l~PlL~lL~~~~~~~~~~Rk~lr~~lLP~~~Dr~~~~e~~~tL~~rLlrLmt~~~~~~k~~vaellf~Lc~~d~  340 (446)
T PF10165_consen  261 LKLDELLTPLLTLLTRLARAAREVRKYLRARLLPPDKDRKKPPEKGDTLRSRLLRLMTSPDPQLKDAVAELLFVLCKEDA  340 (446)
T ss_pred             ccchhhHhhHHHHHHHHHHhcHHHHHHHHHHhCCChhhcccCCCCCcchHHHHHHHhCCCCchHHHHHHHHHHHHHhhhH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHhhccccchhHHHHHhCcCCCCCCCCCCCCCCCcchHHhhhcCCCCCCcccccCC-CCCCCCCCCChhhHhH--H--
Q psy7112         233 ARLIKYTGYGNAAGMLAARGLLGCQNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEP-PKPDSTQEHLRSTFET--V--  307 (319)
Q Consensus       233 ~rfvk~~GYGnAAG~La~rGll~~~~~~~~~S~sedSdTEey~~~~~~INPITG~~e~-~~~~p~e~MTeEEKE~--~--  307 (319)
                      +||||||||||||||||++|+.++++ ..++|+++||+||+|+++++.|||||||+++ ++++||+|||||||||  +  
T Consensus       341 ~~~v~~~GyG~AaG~L~~~gl~~~~~-~~~s~~~~~s~~~~~~~~~~~~npitg~~~~~~~~~~~~~mt~eeke~ea~~l  419 (446)
T PF10165_consen  341 SRFVKYVGYGNAAGFLASRGLGGPPE-EAYSSDSEDSDTEEYKEAKRPINPITGQREDAEKPNPMPEMTEEEKEREAERL  419 (446)
T ss_pred             HHHHHHcCchhHHHHHHHcCCCCCcc-cccccCcccCCCccccccccCcCCCcCCCCCCCCCCCccccchhHHHHHHHHH
Confidence            99999999999999999999933333 5667777999999999999999999999966 8999999999999987  3  


Q ss_pred             -HHHHHhhhh
Q psy7112         308 -SLTSAYSET  316 (319)
Q Consensus       308 -~l~~~~~~~  316 (319)
                       .|||+|++|
T Consensus       420 ~~lf~rl~~~  429 (446)
T PF10165_consen  420 FVLFDRLEKT  429 (446)
T ss_pred             HHHHHHHHhC
Confidence             566666664

It is a guanine nucleotide exchange factor [] that regulates neurotransmitter secretion.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 8e-06
 Identities = 43/302 (14%), Positives = 78/302 (25%), Gaps = 98/302 (32%)

Query: 36  FPTLDRDKLDKLYSLVFNILCNPMYSECYIDC----------LSCLKLLFRDSKYLD-EL 84
           +  ++ DKL  +     N+L    Y + +                L L++ D    D  +
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406

Query: 85  ISQERFNILLQTARLYNTQPTPSSLEQLGSGAGEGESHNADALLTIITYLHEELASRVPS 144
           +  +     L    L   QP  S++                        +          
Sbjct: 407 VVNK-----LHKYSLVEKQPKESTI-----------------------SIP--------- 429

Query: 145 PGTTPTSSSGTVDHILPVLHVLSEAARHHKALRRLIRNQILPARRDFSSR-PEEGDS--- 200
                          L +   L      H   R ++ +  +P   D     P   D    
Sbjct: 430 ------------SIYLELKVKLENEYALH---RSIVDHYNIPKTFDSDDLIPPYLDQYFY 474

Query: 201 --LLSHLTRCLSSGN-TMLRDCCADLLFVLCKENPARLIKYTGYG-NAAGMLAARGLLGC 256
             +  HL         T+ R    D  F+  K      I++     NA+G +     L  
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK------IRHDSTAWNASGSILN--TL-- 524

Query: 257 QNKGQYSSSSEESDTEEYLRVKDNINPVTGVYEPPKPDSTQEHLRSTFETVSLTSAYSET 316
                          + Y   K  I      YE  +  +         E   + S Y++ 
Sbjct: 525 ------------QQLKFY---KPYICDNDPKYE--RLVNAILDFLPKIEENLICSKYTDL 567

Query: 317 VQ 318
           ++
Sbjct: 568 LR 569

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00