Psyllid ID: psy7387


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
MEVEEAASSNDVHIEEPKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
cccccHHHccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccHccHHHHHHHHHHHHHHccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcHHHcccccc
meveeaassndvhieepkdvendlslkDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLknmdslndigdndkdDILRYLDRISLRCTTIDVCvhtlrsddqvESLHQVNCLIDNliigmretpeqtqTKCLSYVAacsssstvgngdktFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD
meveeaassndvhieepkdVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIhtlknmdslndigdnDKDDILRYLDRISLRCTTIDVCVHTLrsddqveslHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGlldymtkekwkkaiqpmd
MEVEEAASSNDVHIEEPKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD
*********************************************************ILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKW********
*****************************LLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNM*S*****DNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWK*AIQPM*
***********VHIEEPKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEK*********
****************PKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKA*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEVEEAASSNDVHIEEPKDVENDLSLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query196 2.2.26 [Sep-21-2011]
Q3ZBG5211 BAG family molecular chap yes N/A 0.846 0.786 0.351 8e-22
Q91YN9210 BAG family molecular chap yes N/A 0.775 0.723 0.355 2e-20
O95816211 BAG family molecular chap yes N/A 0.841 0.781 0.347 2e-20
>sp|Q3ZBG5|BAG2_BOVIN BAG family molecular chaperone regulator 2 OS=Bos taurus PE=2 SV=1 Back     alignment and function desciption
 Score =  103 bits (257), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 2/168 (1%)

Query: 29  HLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDR 88
            LL  LDQ+E  VE LR+ A+ +E EK+ +L  IH+++N   +  I D +++++    +R
Sbjct: 27  RLLESLDQLELRVEALREAATAVEQEKEVLLEMIHSIQNSQDMRQISDGEREELNLTANR 86

Query: 89  ISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSS 148
           +  R  T++V V T+RS  Q ESL     +ID ++    +     ++  +S  +ACSS  
Sbjct: 87  LMGRTLTVEVSVETIRSPQQQESLKHATRIIDEVVSKFLDDLGNARSHLMSLYSACSSEV 146

Query: 149 TVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD 196
             G  D+ F+  V+GCAL+DQK+I++RL  LL  +  E   KAI+ ++
Sbjct: 147 PAGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNI--ENADKAIKLLE 192




Inhibits the chaperone activity of HSP70/HSC70 by promoting substrate release.
Bos taurus (taxid: 9913)
>sp|Q91YN9|BAG2_MOUSE BAG family molecular chaperone regulator 2 OS=Mus musculus GN=Bag2 PE=1 SV=1 Back     alignment and function description
>sp|O95816|BAG2_HUMAN BAG family molecular chaperone regulator 2 OS=Homo sapiens GN=BAG2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
307212548181 BAG family molecular chaperone regulator 0.806 0.872 0.559 6e-44
332020424179 BAG family molecular chaperone regulator 0.872 0.955 0.523 2e-43
350404521185 PREDICTED: BAG family molecular chaperon 0.877 0.929 0.526 1e-39
340716493185 PREDICTED: BAG family molecular chaperon 0.877 0.929 0.526 2e-39
242015480201 conserved hypothetical protein [Pediculu 0.938 0.915 0.450 8e-39
110765976185 PREDICTED: BAG family molecular chaperon 0.877 0.929 0.520 9e-39
380027749185 PREDICTED: BAG family molecular chaperon 0.877 0.929 0.514 4e-38
383860285185 PREDICTED: BAG family molecular chaperon 0.877 0.929 0.520 5e-38
332373350196 unknown [Dendroctonus ponderosae] 0.943 0.943 0.465 1e-37
345494615204 PREDICTED: hypothetical protein LOC10011 0.877 0.843 0.526 1e-37
>gi|307212548|gb|EFN88271.1| BAG family molecular chaperone regulator 2 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 120/159 (75%), Gaps = 1/159 (0%)

Query: 27  KDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYL 86
           KD L+G LDQ+E HVE+LRK AS+LE EKD +LTT+ TL+N D L  + ++D+DD+LRY 
Sbjct: 17  KDRLVGLLDQIEVHVEQLRKDASRLEEEKDSLLTTLDTLRNNDILCTLEESDRDDVLRYA 76

Query: 87  DRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSS 146
           +R+S+RC T+DV V   R   Q E+LHQVN LID L++G+R+ P  T+ +C  ++ ACSS
Sbjct: 77  ERLSMRCLTVDVLVKVQRDHIQQEALHQVNGLIDGLVVGLRQDPSATRQRCAEFMNACSS 136

Query: 147 SSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTK 185
             T G+ DKTFE A+LGC +DDQKRI++RL GLLDY+ K
Sbjct: 137 HGT-GHSDKTFETAILGCTMDDQKRIKKRLQGLLDYIDK 174




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020424|gb|EGI60844.1| BAG family molecular chaperone regulator 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|350404521|ref|XP_003487130.1| PREDICTED: BAG family molecular chaperone regulator 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340716493|ref|XP_003396732.1| PREDICTED: BAG family molecular chaperone regulator 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|242015480|ref|XP_002428381.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512993|gb|EEB15643.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|110765976|ref|XP_623942.2| PREDICTED: BAG family molecular chaperone regulator 2-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380027749|ref|XP_003697581.1| PREDICTED: BAG family molecular chaperone regulator 2-like [Apis florea] Back     alignment and taxonomy information
>gi|383860285|ref|XP_003705621.1| PREDICTED: BAG family molecular chaperone regulator 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332373350|gb|AEE61816.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|345494615|ref|XP_001602353.2| PREDICTED: hypothetical protein LOC100118370 [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
FB|FBgn0036505262 CG7945 [Drosophila melanogaste 0.872 0.652 0.333 1.2e-24
UNIPROTKB|Q3ZBG5211 Q3ZBG5 "BAG family molecular c 0.841 0.781 0.353 3.8e-23
UNIPROTKB|F1RZV1210 BAG2 "Uncharacterized protein" 0.841 0.785 0.347 6.1e-23
UNIPROTKB|J9P4C5211 BAG2 "Uncharacterized protein" 0.841 0.781 0.347 1.6e-22
UNIPROTKB|O95816211 BAG2 "BAG family molecular cha 0.841 0.781 0.347 2.6e-22
MGI|MGI:1891254210 Bag2 "BCL2-associated athanoge 0.770 0.719 0.357 4.3e-22
UNIPROTKB|E1BVW6224 BAG2 "Uncharacterized protein" 0.770 0.674 0.344 5.5e-22
ZFIN|ZDB-GENE-040426-1399208 bag2 "BCL2-associated athanoge 0.841 0.793 0.323 7.2e-20
UNIPROTKB|B4DXE2178 BAG2 "BAG family molecular cha 0.785 0.865 0.333 1.5e-19
RGD|1585173173 Bag2 "Bcl2-associated athanoge 0.714 0.809 0.342 2.5e-19
FB|FBgn0036505 CG7945 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 62/186 (33%), Positives = 111/186 (59%)

Query:    14 IEEPKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLND 73
             +++ + ++   +  +  +  LD ++A VE+LRK A  L+ +KD +L ++  +K+ + + +
Sbjct:    75 VDDSRALDRPFNASERFVTILDSLDARVEKLRKDALNLQEKKDYLLMSMDLIKSNEMMQN 134

Query:    74 IGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQT 133
             + + ++++I+ YL R+S R  T+++ V T+R + Q +SL Q+N LID++I  M + P   
Sbjct:   135 MSEAEREEIILYLQRVSSRLATVELRVRTVRDNSQEDSLSQINVLIDSMI-KMGD-PVIG 192

Query:   134 QTKCLSYVAACSSSST-------------VGNGDKTFEHAVLGCALDDQKRIRQRLNGLL 180
             + +C  Y+ AC SSS              VG  DK FE  +LGC LDDQK I++RL  L+
Sbjct:   193 RQRCQFYLNACCSSSMDPSGHMDTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQALM 252

Query:   181 DYMTKE 186
              Y+ K+
Sbjct:   253 AYLNKQ 258




GO:0006457 "protein folding" evidence=ISS
GO:0051082 "unfolded protein binding" evidence=ISS
UNIPROTKB|Q3ZBG5 Q3ZBG5 "BAG family molecular chaperone regulator 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZV1 BAG2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|J9P4C5 BAG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O95816 BAG2 "BAG family molecular chaperone regulator 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1891254 Bag2 "BCL2-associated athanogene 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVW6 BAG2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1399 bag2 "BCL2-associated athanogene 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|B4DXE2 BAG2 "BAG family molecular chaperone regulator 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1585173 Bag2 "Bcl2-associated athanogene 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O95816BAG2_HUMANNo assigned EC number0.34730.84180.7819yesN/A
Q91YN9BAG2_MOUSENo assigned EC number0.35520.77550.7238yesN/A
Q3ZBG5BAG2_BOVINNo assigned EC number0.35110.84690.7867yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 196
KOG3633|consensus219 100.0
smart0026479 BAG BAG domains, present in regulator of Hsp70 pro 98.35
>KOG3633|consensus Back     alignment and domain information
Probab=100.00  E-value=4.4e-67  Score=443.29  Aligned_cols=170  Identities=33%  Similarity=0.567  Sum_probs=164.9

Q ss_pred             CCCCCchhhHhhhHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHhhccchhhccCCcchHHHHHHHHHHHhhccceeEEEE
Q psy7387          21 ENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCV  100 (196)
Q Consensus        21 ~~~~~~~~rll~~LDqlE~rVE~LRk~A~~LE~EKe~Ll~sl~~i~~s~~l~~l~e~erEei~~~a~RL~~R~~TVeV~V  100 (196)
                      +.+++.|+||+.+||+||.|||+|||+|+.||+|||+||+||+.|++|++|++|+|+|||||.+|++||++||.||+|+|
T Consensus        38 dr~~~~s~r~v~~LD~lelrVE~LRk~A~~le~eKe~lL~s~~~I~~~~~M~~~se~eREEi~l~~~Rl~~Rt~TVev~V  117 (219)
T KOG3633|consen   38 DRPFNASERFVTILDSLELRVEKLRKDALNLEEEKEYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRLSSRTATVEVRV  117 (219)
T ss_pred             cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhHHHHHHHHHHHhcccceEEEEE
Confidence            36788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCChHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhccCCCC-CCCCcchhhhHHHhccchhhhHHHHHHHHHH
Q psy7387         101 HTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSS-TVGNGDKTFEHAVLGCALDDQKRIRQRLNGL  179 (196)
Q Consensus       101 ~T~Rn~~QEeAL~qvn~lID~lv~~~~~D~~~ar~~c~~ylnACss~~-~~gp~DqkFqs~vIgCtlDDQKrIKkRLe~L  179 (196)
                      +|+||++|++||.|+|.|||+++++++.+++.||.++++|++||||+. |.||+||||++||||||+||||+||||||+|
T Consensus       118 eT~Rn~~Q~~sL~~at~lIDev~~m~~~~ig~ak~~l~tl~~aCSse~~p~GpvdqkF~si~igCaldDQK~IKrRLe~L  197 (219)
T KOG3633|consen  118 ETVRNNSQEDSLSQATVLIDEVIKMGDPVIGRAKCQLYTLNAACSSEMDPSGPVDQKFESILIGCALDDQKNIKRRLEAL  197 (219)
T ss_pred             eccCChHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhccccCCCCchhHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998 4599999999999999999999999999999


Q ss_pred             HHHHHHHhHhh
Q psy7387         180 LDYMTKEKWKK  190 (196)
Q Consensus       180 l~yi~k~~~~k  190 (196)
                      |.||++++++.
T Consensus       198 m~~ien~~~eh  208 (219)
T KOG3633|consen  198 MAYIENQTVEH  208 (219)
T ss_pred             HHHHHHHHHhh
Confidence            99999977764



>smart00264 BAG BAG domains, present in regulator of Hsp70 proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
3cqx_C88 Chaperone Complex Length = 88 4e-07
>pdb|3CQX|C Chain C, Chaperone Complex Length = 88 Back     alignment and structure

Iteration: 1

Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%) Query: 110 ESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQ 169 ESL +ID ++ + ++ +S +ACSS G D+ F+ V+GCAL+DQ Sbjct: 7 ESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCALEDQ 66 Query: 170 KRIRQRLNGLL 180 K+I++RL LL Sbjct: 67 KKIKRRLETLL 77

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
3cqx_C88 BAG family molecular chaperone regulator 2; protei 1e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>3cqx_C BAG family molecular chaperone regulator 2; protein-protein complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; 2.30A {Mus musculus} PDB: 3d0t_A Length = 88 Back     alignment and structure
 Score = 91.2 bits (226), Expect = 1e-24
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 108 QVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALD 167
             ESL     +ID ++    +     ++  +S  +ACSS    G  D+ F+  V+GCAL+
Sbjct: 5   SEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCALE 64

Query: 168 DQKRIRQRLNGLLDYMTK 185
           DQK+I++RL  LL  +  
Sbjct: 65  DQKKIKRRLETLLRNIDN 82


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
3cqx_C88 BAG family molecular chaperone regulator 2; protei 100.0
3m48_A33 General control protein GCN4; leucine zipper, synt 81.62
>3cqx_C BAG family molecular chaperone regulator 2; protein-protein complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; 2.30A {Mus musculus} PDB: 3d0t_A Back     alignment and structure
Probab=100.00  E-value=3.4e-46  Score=281.63  Aligned_cols=85  Identities=34%  Similarity=0.575  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhccCCCCCCCCcchhhhHHHhccchhhhHHHHHHHHHHHHHHHHH
Q psy7387         107 DQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKE  186 (196)
Q Consensus       107 ~QEeAL~qvn~lID~lv~~~~~D~~~ar~~c~~ylnACss~~~~gp~DqkFqs~vIgCtlDDQKrIKkRLe~Ll~yi~k~  186 (196)
                      +||+|||+||+|||++|++|++||++||++|++|||||||++|+||+||||||+|||||+|||||||||||+||+||  +
T Consensus         4 ~Qe~aL~~vn~lID~~v~k~~~D~~~ar~~c~~ylnACss~~~~gp~DqkFqs~vi~CtlDDQKkIkkRLe~Ll~~i--d   81 (88)
T 3cqx_C            4 GSEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNI--D   81 (88)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSSCCCHHHHHHHHTSCHHHHHHHHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHhcccHhhHHHHHHHHHHHHHHH--H
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999  9


Q ss_pred             hHhhhcC
Q psy7387         187 KWKKAIQ  193 (196)
Q Consensus       187 ~~~k~i~  193 (196)
                      +++|+|+
T Consensus        82 ~aek~i~   88 (88)
T 3cqx_C           82 NSDKAIK   88 (88)
T ss_dssp             HHHHTC-
T ss_pred             HhhhcCC
Confidence            9999986



>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00