Psyllid ID: psy7835

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-----
Protein Sequence
MSSSKNVANNGPPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWND
Secondary Structure (PSIPRED)
cccccccccccccccccHHHcccccccccccccEEEEEccccccEEEEcccccccccEEEEEEHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEccccccccccccccEEEcccccccccEEEEcccccccccEEEEEEcccccccEEEEEEEEEccccccccccccccEEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHccccccccccHHHHEEEEEcccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEcccccccHHHcccccccccccccccEccccccccccccEEEEEEEcccccEEEEEEEEEEEEcEccccccccccEEEEEEEEEEccc
Coil and Loop (DISEMBL)
msssknvanngpprgyeWEYARKdlgntkwqnfklciynpqtgevfgrtpkswggIFLFYVIFYSILACLFAICMYVLMStltdeypklqldesiigvnpvtrkgnltgnwRTIWvscsgadphdtetmgdvdyfpqpgypgyfypytntigylspiiavrfrnpgvgtlINVECRAWAKNIRYkksglnregsVHFELLLEWND
Flexible Loop (DISEMBL)
msssknvanngpprgyEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLdesiigvnpvtrkgnltgNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIrykksglnregsvhfelllewnd
Low Complexity Region (SEG)
MSSSKNVANNGPPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDyfpqpgypgyfypyTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWND
Disordered region (IsUnstruct)
***************YEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEW**
Disordered Region (DISOPRED)
**********************************LCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWN*
Disordered Region (DISEMBL)
***********PPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWND
Disordered Region (DISPRO)
********************A****GNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSKNVANNGPPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	205	2.2.26 [Sep-21-2011]
Q24048	323	Sodium/potassium-transpor	yes	N/A	0.429	0.272	0.577	6e-25
Q24046	309	Sodium/potassium-transpor	no	N/A	0.443	0.294	0.484	1e-22
P25169	315	Sodium/potassium-transpor	N/A	N/A	0.424	0.276	0.438	2e-17
P54709	279	Sodium/potassium-transpor	yes	N/A	0.302	0.222	0.564	3e-13
A8X4W9	326	Probable sodium/potassium	N/A	N/A	0.517	0.325	0.382	4e-13
Q63377	279	Sodium/potassium-transpor	yes	N/A	0.268	0.197	0.6	2e-12
Q9GLC3	279	Sodium/potassium-transpor	yes	N/A	0.282	0.207	0.540	4e-12
P97370	278	Sodium/potassium-transpor	yes	N/A	0.268	0.197	0.581	5e-12
Q93235	320	Sodium/potassium-transpor	yes	N/A	0.429	0.275	0.422	7e-12
Q3T0C6	279	Sodium/potassium-transpor	yes	N/A	0.302	0.222	0.532	9e-12

>sp|Q24048|ATPB2_DROME Sodium/potassium-transporting ATPase subunit beta-2 OS=Drosophila melanogaster GN=nrv2 PE=1 SV=2

 Score =  114 bits (284), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 2/90 (2%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLIN 172
           TIWVSC G +P D E +G V+Y P  G+PGYFYPY N+ GYLSP++AV F+ P  G +IN
Sbjct: 236 TIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIIN 295

Query: 173 VECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           VECRAWA+NI + +    R GSVH+ELL++
Sbjct: 296 VECRAWARNIIHDRK--ERIGSVHYELLID 323

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.
Drosophila melanogaster (taxid: 7227)

>sp|Q24046|ATPB1_DROME Sodium/potassium-transporting ATPase subunit beta-1 OS=Drosophila melanogaster GN=nrv1 PE=1 SV=2

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 67/95 (70%)

Query: 108 TGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGV 167
           T   + +WVSC+G    D E   ++ YFP  G+P Y+YP+ N  GYLSP++AV+F +P  
Sbjct: 215 TEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSYYYPFLNQPGYLSPLVAVQFNSPPK 274

Query: 168 GTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           G +++VECRAWAKNI+Y  S  +R+GSV F++LL+
Sbjct: 275 GQMLDVECRAWAKNIQYSGSVRDRKGSVTFQILLD 309

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|P25169|AT1B1_ARTSF Sodium/potassium-transporting ATPase subunit beta OS=Artemia franciscana PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 114 IWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINV 173
           +W+SC G   +D E +G + Y P  G+P Y+YPY N  GYL+P++A++F +   G  +NV
Sbjct: 229 VWLSCEGETANDKEKIGTITYTPFRGFPAYYYPYLNVPGYLTPVVALQFGSLQNGQAVNV 288

Query: 174 ECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           EC+AWA NI   +    R GSVHFE+ ++
Sbjct: 289 ECKAWANNISRDRQ--RRLGSVHFEIRMD 315

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Artemia franciscana (taxid: 6661)

>sp|P54709|AT1B3_HUMAN Sodium/potassium-transporting ATPase subunit beta-3 OS=Homo sapiens GN=ATP1B3 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%)

Query: 27 NTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEY 86
          N     +KL IYNP TGE  GRT KSWG I LFY++FY  LA LF+  M+V++ TL DE 
Sbjct: 10 NQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQTLNDEV 69

Query: 87 PK 88
          PK
Sbjct: 70 PK 71

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Homo sapiens (taxid: 9606)

>sp|A8X4W9|AT1B3_CAEBR Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis briggsae GN=nkb-3 PE=3 SV=3

 Score = 74.7 bits (182), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 95  IIGVNPVTRKGN-----LTGNWRT--IWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPY 147
           +IG  PV   GN     +   +++  I ++C GA P D E +G V Y P+ G  G +YPY
Sbjct: 204 LIGWRPVDYDGNSVPEEIKSRYKSGSITINCEGATPFDKEHLGKVKYIPEAGIDGRYYPY 263

Query: 148 TNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
                Y  PI  V+F       L+ VECRA+A NI +  S   R G V+FEL +E
Sbjct: 264 VFLPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIEHDVS--TRIGMVYFELFVE 316

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane. Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q63377|AT1B3_RAT Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus GN=Atp1b3 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 39/55 (70%)

Query: 34 KLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPK 88
          KL IYNP +GE  GRT KSWG I LFY++FY  LA LF   M+V++ TL DE PK
Sbjct: 17 KLFIYNPTSGEFLGRTSKSWGLILLFYLVFYGFLAALFTFTMWVMLQTLNDEVPK 71

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Rattus norvegicus (taxid: 10116)

>sp|Q9GLC3|AT1B3_RABIT Sodium/potassium-transporting ATPase subunit beta-3 OS=Oryctolagus cuniculus GN=ATP1B3 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 28 TKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYP 87
           +W+ F   IYNP +GE  GRT KSWG I LFY++FY  LA LF   M+V++ TL DE P
Sbjct: 14 AEWKRF---IYNPTSGEFLGRTAKSWGLILLFYLVFYGFLAALFTFTMWVMLQTLNDEVP 70

Query: 88 K 88
          K
Sbjct: 71 K 71

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Oryctolagus cuniculus (taxid: 9986)

>sp|P97370|AT1B3_MOUSE Sodium/potassium-transporting ATPase subunit beta-3 OS=Mus musculus GN=Atp1b3 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 38/55 (69%)

Query: 34 KLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPK 88
          KL IYNP +GE  GRT KSWG I LFY++FY  LA LF   M+ ++ TL DE PK
Sbjct: 17 KLFIYNPSSGEFLGRTSKSWGLILLFYLVFYGFLAALFTFTMWAMLQTLNDEVPK 71

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Mus musculus (taxid: 10090)

>sp|Q93235|AT1B1_CAEEL Sodium/potassium-transporting ATPase subunit beta-1 OS=Caenorhabditis elegans GN=nkb-1 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLIN 172
           +I ++C GA   D E +G V Y P  G  G +YPY  T GY  PI  V+F       L+ 
Sbjct: 223 SIAINCRGATNVDQEHIGKVTYMPSNGIDGRYYPYVFTKGYQQPIAMVKFDTIPRNKLVI 282

Query: 173 VECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           VECRA+A NI +  S  +R G V+FE+++E
Sbjct: 283 VECRAYALNIEHDIS--SRLGMVYFEVMVE 310

Non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). May also may function in the peptidic vesicle transport pathway from the endoplasmic reticulum for the defecation behaviors.

Caenorhabditis elegans (taxid: 6239)

>sp|Q3T0C6|AT1B3_BOVIN Sodium/potassium-transporting ATPase subunit beta-3 OS=Bos taurus GN=ATP1B3 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 40/62 (64%)

Query: 27 NTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEY 86
          N     +KL IYN  TGE  GRT KSWG I LFY++FY  LA LF+  M+ ++ TL DE 
Sbjct: 10 NQSLAEWKLFIYNRTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWAMLQTLNDEV 69

Query: 87 PK 88
          PK
Sbjct: 70 PK 71

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
242024012	398	sodium/potassium-transporting ATPase sub	0.546	0.281	0.487	8e-28
193654811	323	PREDICTED: sodium/potassium-transporting	0.873	0.554	0.4	2e-27
307193346	324	Sodium/potassium-transporting ATPase sub	0.629	0.398	0.438	3e-25
332024990	325	Sodium/potassium-transporting ATPase sub	0.521	0.329	0.5	4e-25
328790683	524	PREDICTED: sodium/potassium-transporting	0.439	0.171	0.560	6e-25
322786974	325	hypothetical protein SINV_03764 [Solenop	0.521	0.329	0.5	1e-24
380022252	306	PREDICTED: sodium/potassium-transporting	0.439	0.294	0.549	2e-24
383858832	542	PREDICTED: sodium/potassium-transporting	0.439	0.166	0.565	3e-24
307177315	323	Sodium/potassium-transporting ATPase sub	0.512	0.325	0.491	3e-24
380013837	322	PREDICTED: sodium/potassium-transporting	0.629	0.400	0.416	3e-24

>gi|242024012|ref|XP_002432424.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis] gi|212517857|gb|EEB19686.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis]

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 11/123 (8%)

Query: 83  TDEYPKL---QLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPG 139
           TD  P+    +L E I  + P  R          +W++C G +P D E +G + Y+P+ G
Sbjct: 284 TDNLPEEMDEELKEHIKEIPPSERN--------VVWITCYGENPADRENIGGIQYYPKRG 335

Query: 140 YPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFEL 199
           +PG++YP+TNT GYLSP++AV F+ P + TLINVECRAWAKNI YK++  +REGSVHFEL
Sbjct: 336 FPGFYYPFTNTPGYLSPLVAVHFQRPALHTLINVECRAWAKNIEYKRAHQHREGSVHFEL 395

Query: 200 LLE 202
           L++
Sbjct: 396 LID 398

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193654811|ref|XP_001950178.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Acyrthosiphon pisum]

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 11/190 (5%)

Query: 20  YARKDLGNTKWQNFKLCIYN--PQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYV 77
           Y  K L   K  N + C YN  PQ  +V   +  + G     Y   Y         C+++
Sbjct: 138 YKNKTLLPDKGNNQQKCGYNMPPQKDKVCEVSLANMGPCATEYKYQYHKAQ----PCVFI 193

Query: 78  LMSTLTDEYPKLQLDESIIGVN-PVTRKGNLTGNWR----TIWVSCSGADPHDTETMGDV 132
            ++ + D  P+   +++ I  + P   K  +    +    TIWV+C G  P D + +G V
Sbjct: 194 KLNKIFDWEPEFYTNKTDIPADMPQELKETIAQRMKHELFTIWVTCDGEAPADKDNIGPV 253

Query: 133 DYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNRE 192
             +PQ G+PGY+YPY N   YLSP+IA+ F NP   TLINVECRAWAKNI YK+S  NRE
Sbjct: 254 KLYPQDGFPGYYYPYRNKRDYLSPLIAIHFLNPKRHTLINVECRAWAKNIFYKRSLQNRE 313

Query: 193 GSVHFELLLE 202
           GSVHFEL+++
Sbjct: 314 GSVHFELMID 323

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193346|gb|EFN76208.1| Sodium/potassium-transporting ATPase subunit beta-2 [Harpegnathos saltator]

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 90/139 (64%), Gaps = 10/139 (7%)

Query: 72  AICMYVLMSTLTDEYPKLQLD-ESIIGVNP-------VTRKGNLTGNWRTIWVSCSGADP 123
           A C+++ ++ +    P    D E++ G  P        T KGN +    TIWVSC G +P
Sbjct: 188 APCIFLKLNKIYGWRPDFYNDTENLPGKMPHDLKEHIATLKGNNSLQLNTIWVSCEGENP 247

Query: 124 HDTETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIR 183
            D E +G ++Y P+ G+PGYFYPY N+ GYLSP++AV F  P  G LINVEC+AWAKNI+
Sbjct: 248 ADQENIGPINYLPRRGFPGYFYPYENSEGYLSPLVAVHFVRPRTGILINVECKAWAKNIK 307

Query: 184 YKKSGLNREGSVHFELLLE 202
           + ++  ++ G+VHFEL+++
Sbjct: 308 HSRN--DKIGAVHFELMID 324

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024990|gb|EGI65177.1| Sodium/potassium-transporting ATPase subunit beta-2 [Acromyrmex echinatior]

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 79/114 (69%), Gaps = 7/114 (6%)

Query: 89  LQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYT 148
           L L E I  +     KGN +    TIWVSC G +P D E +G ++Y P+ G+PGYFYPY 
Sbjct: 219 LDLKEHIASL-----KGNNSLQLNTIWVSCEGENPADQENIGPINYLPRHGFPGYFYPYE 273

Query: 149 NTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           N+ GYLSP++AV F  P  G LINVEC+AWAKNI++ ++  ++ G+VHFEL+++
Sbjct: 274 NSEGYLSPLVAVHFVRPRTGILINVECKAWAKNIKHSRN--DKIGAVHFELMID 325

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790683|ref|XP_001121773.2| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis mellifera]

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 69/91 (75%), Gaps = 1/91 (1%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQ-PGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLI 171
           T+WVSC GA+PHD E +G+++Y+P+  G+PGY+YPY N  GYLSP++AV F  P    +I
Sbjct: 433 TVWVSCKGANPHDNEDIGELNYYPENHGFPGYYYPYQNIPGYLSPVVAVHFLRPARNKII 492

Query: 172 NVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           NVECRAWAKNI+Y  S   + G VHFEL+++
Sbjct: 493 NVECRAWAKNIKYMTSQNQQHGMVHFELMID 523

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786974|gb|EFZ13198.1| hypothetical protein SINV_03764 [Solenopsis invicta]

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 7/114 (6%)

Query: 89  LQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYT 148
           L L E I  +     K N +    TIWVSC G +P D E +G ++Y P+ G+PGYFYPY 
Sbjct: 219 LDLKEHIANL-----KVNNSLQLNTIWVSCEGENPADQENIGPINYLPRRGFPGYFYPYE 273

Query: 149 NTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           N+ GYLSP++AV F  P  G LINVEC+AWAKNI++ K+  ++ G+VHFEL+++
Sbjct: 274 NSEGYLSPLVAVHFVRPRTGILINVECKAWAKNIKHSKT--DKIGAVHFELMID 325

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022252|ref|XP_003694965.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis florea]

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 1/91 (1%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQP-GYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLI 171
           T+WVSC GA+PHD E +G+++Y+P+  G+PGY+YPY N  GYLSP++AV F  P    +I
Sbjct: 215 TVWVSCKGANPHDNEDIGELNYYPESHGFPGYYYPYQNYPGYLSPVVAVHFLRPARNKII 274

Query: 172 NVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           NVECRAWAKNI+Y  +   + G VHFEL+++
Sbjct: 275 NVECRAWAKNIKYMTTQNQQHGMVHFELMID 305

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858832|ref|XP_003704903.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Megachile rotundata]

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 2/92 (2%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQP-GYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLI 171
           T+WVSC G DPHD E++G++DY+P+  G+PGY+YPY N  GYLSP++AV F  P    +I
Sbjct: 441 TVWVSCKGEDPHDNESIGELDYYPKSHGFPGYYYPYQNIPGYLSPVVAVHFLRPARNRII 500

Query: 172 NVECRAWAKNIRYKKSGLNR-EGSVHFELLLE 202
           NV+CRAWAKNI Y  +   R  GSVHFEL+++
Sbjct: 501 NVQCRAWAKNIIYSSAKGKRGSGSVHFELMID 532

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177315|gb|EFN66488.1| Sodium/potassium-transporting ATPase subunit beta-2 [Camponotus floridanus]

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 9/114 (7%)

Query: 89  LQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQPGYPGYFYPYT 148
           L L E I  VN        + +  TIWVSC G +P D E +G ++Y P+ G+PGYFYPY 
Sbjct: 219 LDLKEHIASVND-------SLHLNTIWVSCEGENPADQENIGPINYLPRRGFPGYFYPYE 271

Query: 149 NTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           N+ GYLSP++AV F  P  G LINVEC+AWAKNI++ ++  ++ G+VHFEL+++
Sbjct: 272 NSEGYLSPLVAVHFVRPQTGILINVECKAWAKNIKHSRN--DKIGAVHFELMID 323

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013837|ref|XP_003690952.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis florea]

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 8/137 (5%)

Query: 72  AICMYVLMSTLTDEYPKLQLDESIIGVN-PVTRKGNLTG-----NWRTIWVSCSGADPHD 125
           A C+++ ++ +    P+   D + +  N P+  K ++TG        TIWVSC G +P D
Sbjct: 188 APCIFLKLNKIYGWKPEFYNDTNSLPQNMPIDLKEHITGLKNTYQLDTIWVSCEGENPAD 247

Query: 126 TETMGDVDYFPQPGYPGYFYPYTNTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYK 185
            E +G ++Y P+ G+PGYFYP+ N+ GYLSP++AV F  P  G LINVEC+AWA+NI++ 
Sbjct: 248 QENIGPIEYIPRRGFPGYFYPFENSEGYLSPLVAVHFVRPRTGILINVECKAWARNIKHS 307

Query: 186 KSGLNREGSVHFELLLE 202
           +   ++ G VHFEL+++
Sbjct: 308 RH--DKMGVVHFELMID 322

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
FB|FBgn0015776	309	nrv1 "nervana 1" [Drosophila m	0.429	0.284	0.5	1.3e-36
FB|FBgn0015777	323	nrv2 "nervana 2" [Drosophila m	0.429	0.272	0.466	1.7e-33
FB|FBgn0032946	311	nrv3 "nervana 3" [Drosophila m	0.482	0.318	0.388	7.9e-31
WB|WBGene00007646	320	nkb-1 [Caenorhabditis elegans	0.370	0.237	0.425	3.2e-21
UNIPROTKB|P54709	279	ATP1B3 "Sodium/potassium-trans	0.321	0.236	0.552	2.4e-19
WB|WBGene00010117	317	nkb-3 [Caenorhabditis elegans	0.443	0.287	0.351	7.3e-19
MGI|MGI:107788	278	Atp1b3 "ATPase, Na+/K+ transpo	0.273	0.201	0.571	7.1e-18
RGD|2172	279	Atp1b3 "ATPase, Na+/K+ transpo	0.273	0.200	0.589	1.2e-17
ZFIN|ZDB-GENE-001127-2	285	atp1b2a "ATPase, Na+/K+ transp	0.326	0.235	0.444	2.5e-17
ZFIN|ZDB-GENE-990415-167	278	atp1b3a "ATPase, Na+/K+ transp	0.307	0.226	0.476	2.6e-17

FB|FBgn0015776 nrv1 "nervana 1" [Drosophila melanogaster (taxid:7227)]

 Score = 222 (83.2 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
 Identities = 46/92 (50%), Positives = 57/92 (61%)

Query:     9 NNGPPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILA 68
             NNG     E+E+ +      K Q F   IYNPQ G  FGRT KSW  + LFY IFY +LA
Sbjct:     4 NNGKGAKGEFEFPQP----AKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLA 59

Query:    69 CLFAICMYVLMSTLTDEYPKLQLDESIIGVNP 100
              LF ICM  L+ST++D  PK +L +S+IG NP
Sbjct:    60 ALFTICMQGLLSTISDTEPKWKLQDSLIGTNP 91

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS;NAS

GO:0006812 "cation transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0006813 "potassium ion transport" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA;NAS

GO:0005515 "protein binding" evidence=IPI

FB|FBgn0015777 nrv2 "nervana 2" [Drosophila melanogaster (taxid:7227)]

 Score = 208 (78.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 42/90 (46%), Positives = 56/90 (62%)

Query:   113 TIWVSCSGADPHDTETMGDVDXXXXXXXXXXXXXXTNTIGYLSPIIAVRFRNPGVGTLIN 172
             TIWVSC G +P D E +G V+               N+ GYLSP++AV F+ P  G +IN
Sbjct:   236 TIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIIN 295

Query:   173 VECRAWAKNIRYKKSGLNREGSVHFELLLE 202
             VECRAWA+NI + +    R GSVH+ELL++
Sbjct:   296 VECRAWARNIIHDRK--ERIGSVHYELLID 323

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0005918 "septate junction" evidence=IDA

GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

FB|FBgn0032946 nrv3 "nervana 3" [Drosophila melanogaster (taxid:7227)]

 Score = 183 (69.5 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
 Identities = 40/103 (38%), Positives = 57/103 (55%)

Query:   101 VTRKGNLTGN-WRTIWVSCSGADPHDTETMGDVDXXXXXXXXXXXXXXTNTIGYLSPIIA 159
             +  K +L  N    +WVSC G +P D E +   D               N  GY+ PI+A
Sbjct:   212 IKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMGFPRYYFPFKNIQGYIPPIVA 271

Query:   160 VRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
             V+F     G LIN+EC+AWA+NI + +S  +R GSVHFEL+++
Sbjct:   272 VQF-TVETGVLINIECKAWARNINHDRS--DRRGSVHFELMVD 311

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA;NAS

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

WB|WBGene00007646 nkb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 162 (62.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 34/80 (42%), Positives = 47/80 (58%)

Query:    21 ARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMS 80
             AR D+  T    F+  +YN + G V GRT KSW  I +FY+IFY+ LA  +  C+ + M 
Sbjct:    21 ARDDVPET----FREFLYNKKNGTVMGRTGKSWFQIIVFYIIFYAFLAAFWLTCLTIFMK 76

Query:    81 TLTDEYPKLQLDESIIGVNP 100
             TL  + P+     +IIGVNP
Sbjct:    77 TLDPKVPRFYGKGTIIGVNP 96

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|P54709 ATP1B3 "Sodium/potassium-transporting ATPase subunit beta-3" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 37/67 (55%), Positives = 45/67 (67%)

Query:    22 RKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMST 81
             +K L N     +KL IYNP TGE  GRT KSWG I LFY++FY  LA LF+  M+V++ T
Sbjct:     6 KKSL-NQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMWVMLQT 64

Query:    82 LTDEYPK 88
             L DE PK
Sbjct:    65 LNDEVPK 71

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

GO:0006810 "transport" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0034220 "ion transmembrane transport" evidence=TAS

GO:0050900 "leukocyte migration" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

WB|WBGene00010117 nkb-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 144 (55.7 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
 Identities = 32/91 (35%), Positives = 45/91 (49%)

Query:    10 NGPPRGYEWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILAC 69
             NG   G E +         + + F   +YN   G V GRT  SW  I +FY+IFY  L+ 
Sbjct:     3 NGGRNGEENKNLMNGEAKAEPETFAQFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSA 62

Query:    70 LFAICMYVLMSTLTDEYPKLQLDESIIGVNP 100
              F  C+ + + TL  + P+     +IIGVNP
Sbjct:    63 FFIGCLSIFLRTLDPKVPRFYGKGTIIGVNP 93

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:107788 Atp1b3 "ATPase, Na+/K+ transporting, beta 3 polypeptide" [Mus musculus (taxid:10090)]

 Score = 177 (67.4 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
 Identities = 32/56 (57%), Positives = 39/56 (69%)

Query:    33 FKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPK 88
             +KL IYNP +GE  GRT KSWG I LFY++FY  LA LF   M+ ++ TL DE PK
Sbjct:    16 WKLFIYNPSSGEFLGRTSKSWGLILLFYLVFYGFLAALFTFTMWAMLQTLNDEVPK 71

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=ISO

GO:0005901 "caveola" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=ISO

GO:0006814 "sodium ion transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=ISO

RGD|2172 Atp1b3 "ATPase, Na+/K+ transporting, beta 3 polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 180 (68.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query:    33 FKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPK 88
             +KL IYNP +GE  GRT KSWG I LFY++FY  LA LF   M+V++ TL DE PK
Sbjct:    16 WKLFIYNPTSGEFLGRTSKSWGLILLFYLVFYGFLAALFTFTMWVMLQTLNDEVPK 71

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IC;IDA;TAS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IDA

GO:0005901 "caveola" evidence=IDA

GO:0006813 "potassium ion transport" evidence=IDA

GO:0006814 "sodium ion transport" evidence=IDA

GO:0030001 "metal ion transport" evidence=IDA

GO:0042470 "melanosome" evidence=IEA

ZFIN|ZDB-GENE-001127-2 atp1b2a "ATPase, Na+/K+ transporting, beta 2a polypeptide" [Danio rerio (taxid:7955)]

 Score = 157 (60.3 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
 Identities = 32/72 (44%), Positives = 47/72 (65%)

Query:    19 EYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVL 78
             E  +K+ G+  W++F    +NP+T E+ GRT  SWG I LFY++FY+ LA +F + MYV+
Sbjct:     4 EDEKKESGS--WKDF---FWNPRTHELLGRTASSWGLILLFYLVFYTFLAGVFCLTMYVM 58

Query:    79 MSTLTDEYPKLQ 90
             + TL D  P  Q
Sbjct:    59 LLTLDDYQPTWQ 70

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-990415-167 atp1b3a "ATPase, Na+/K+ transporting, beta 3a polypeptide" [Danio rerio (taxid:7955)]

 Score = 175 (66.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
 Identities = 30/63 (47%), Positives = 44/63 (69%)

Query:    26 GNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDE 85
             G     ++K  IYNP+TGE+FGRT ++WG I LFY++FY  LA +F   ++V++ TL D+
Sbjct:    11 GKEPESSWKDAIYNPRTGELFGRTARNWGLILLFYLVFYGFLAAMFVFTLWVMLQTLNDD 70

Query:    86 YPK 88
              PK
Sbjct:    71 TPK 73

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q24048	ATPB2_DROME	No assigned EC number	0.5777	0.4292	0.2724	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	205
TIGR01107	289	TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPas	6e-21
pfam00287	289	pfam00287, Na_K-ATPase, Sodium / potassium ATPase	4e-20
pfam00287	289	pfam00287, Na_K-ATPase, Sodium / potassium ATPase	1e-17
TIGR01107	289	TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPas	2e-10

>gnl|CDD|162204 TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPase beta subunit

 Score = 87.4 bits (217), Expect = 6e-21
 Identities = 26/59 (44%), Positives = 37/59 (62%)

Query: 32 NFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQ 90
           +K  I+NP+T E  GRT  SW  I LFY++FY  LA +F   + V++ T++D  PK Q
Sbjct: 15 EWKKFIWNPETKEFLGRTGGSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQ 73

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients [Transport and binding proteins, Cations and iron carrying compounds]. Length = 289

>gnl|CDD|215838 pfam00287, Na_K-ATPase, Sodium / potassium ATPase beta chain

 Score = 85.5 bits (212), Expect = 4e-20
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query: 23 KDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTL 82
          K   +   + +K  ++NP+TGE  GRT  SW  I LFYV+FY  LA +F + ++V++ TL
Sbjct: 7  KKSCSQSMEEWKKFVWNPETGEFLGRTGSSWAKILLFYVVFYGFLAGIFTLTIWVMLQTL 66

Query: 83 TDEYPKLQ 90
           D  PK Q
Sbjct: 67 DDYTPKYQ 74

Length = 289

>gnl|CDD|215838 pfam00287, Na_K-ATPase, Sodium / potassium ATPase beta chain

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 95  IIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVDYFPQ-PGYPGYFYPYTNT--- 150
           IIG  P   K   +       + C+G    D + +G+++YFP   G+   +YPY      
Sbjct: 185 IIGFKPEPPKNYNSTA---PPIHCTGKRAEDKDRIGNIEYFPMGGGFDLMYYPYYGKKLQ 241

Query: 151 IGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFE 198
             YL P++AV+F N      + VEC+ +A+NI+         G V F+
Sbjct: 242 PNYLQPLVAVKFTNLTRNVEVRVECKIYAENIKNDDPRDRFLGRVEFK 289

Length = 289

>gnl|CDD|162204 TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPase beta subunit

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 116 VSCSGADPHDTETMGDVDYFP-QPGYPGYFYPYTNT---IGYLSPIIAVRFRNPGVGTLI 171
           V C+G    D E +G+V+Y+P   G+P  ++PY        YL P++AV+F N  + T +
Sbjct: 198 VDCTGKRDEDDENIGNVEYYPMNGGFPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEV 257

Query: 172 NVECRAWAKNIRYKKSGLNREGSVHFEL 199
            +EC+ + +NI Y        G V F++
Sbjct: 258 RIECKIYGENIAYSNEKDRFLGRVDFKI 285

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients [Transport and binding proteins, Cations and iron carrying compounds]. Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	205
TIGR01107	289	Na_K_ATPase_bet Sodium Potassium ATPase beta subun	100.0
PF00287	289	Na_K-ATPase: Sodium / potassium ATPase beta chain;	100.0
KOG3927|consensus	300		100.0

>TIGR01107 Na_K_ATPase_bet Sodium Potassium ATPase beta subunit

Probab=100.00  E-value=1e-65  Score=457.29  Aligned_cols=169  Identities=33%  Similarity=0.644  Sum_probs=156.7

Q ss_pred             cccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC-------
Q psy7835          30 WQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT-------  102 (205)
Q Consensus        30 ~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl-------  102 (205)
                      +++|++|||||+||||||||++||++|+|||+|||+|||||||+||||||||||+++|+||++.    ++|||       
T Consensus        13 ~~~~k~fi~n~~~~e~~GRT~~sW~kIllFYliFY~~La~~F~~~m~v~l~Tl~~~~Pk~q~~~----~~PGL~~rP~~~   88 (289)
T TIGR01107        13 MGEWKKFIWNPETKEFLGRTGGSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQDRV----ASPGLTQRPKVQ   88 (289)
T ss_pred             ccchhhheeCCCCCeEeccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcCC----CCCceeeccCCC
Confidence            8899999999999999999999999999999999999999999999999999999999999543    58999       


Q ss_pred             ---------CC--------------------C---C--------------------------------------------
Q psy7835         103 ---------RK--------------------G---N--------------------------------------------  106 (205)
Q Consensus       103 ---------d~--------------------g---N--------------------------------------------  106 (205)
                               |+                    +   +                                            
T Consensus        89 ~~eI~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q~~~~~~~C~~~~~~~~~~~~~~~~~~~~~C~F~~~~Lg~Cs~~~D~~  168 (289)
T TIGR01107        89 KLEISFNVSDPSSYEGYVQNLHKFLKPYNDSAQEDKNLFDCGDGAEYEQRGPFNAPYGTKKACQFKRDWLGNCSGLNDPT  168 (289)
T ss_pred             ceEEEEeCCChHHHHHHHHHHHHHHHhhchhhccccccccCCccccccccCCccccccccccceecHHhccCCCCCCCCC
Confidence                     00                    0   0                                            


Q ss_pred             ---------------ccccee-----eeeEeeeeCCCCCCCCCcceEEeCCCC-CCCcceeccC---CCCCCCceEEEEe
Q psy7835         107 ---------------LTGNWR-----TIWVSCSGADPHDTETMGDVDYFPQPG-YPGYFYPYTN---TIGYLSPIIAVRF  162 (205)
Q Consensus       107 ---------------~~~Gw~-----~iwVsC~g~~~~d~e~ig~i~Y~P~~g-fp~~YfPY~n---q~~Y~sPLVAVqf  162 (205)
                                     +.|||.     .|||+|++++++|.|++|+|+|||.+| ||++||||+|   |++|+||||||||
T Consensus       169 fGY~~GkPCI~iKLNrIig~~P~~~~~i~v~C~~~~~~d~e~~g~i~YyP~~G~f~~~YfPY~gk~~q~~YlqPLVAVqf  248 (289)
T TIGR01107       169 FGYSEGKPCIIIKMNRIIGFKPKNPGVPPVDCTGKRDEDDENIGNVEYYPMNGGFPLQYFPYYGKKLQPNYLQPLVAVQF  248 (289)
T ss_pred             cCcCCCCCeEEEEeeeeeCcccCCCCCCceEecccCccccccccceEECCCCCCcCcccccccCcccCcCCcCCeEEEEe
Confidence                           014444     499999999999999999999999987 9999999999   9999999999999


Q ss_pred             eCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835         163 RNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE  202 (205)
Q Consensus       163 ~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd  202 (205)
                      .|+++|++|+|||||||+||.++++|++++|||+|+|+||
T Consensus       249 ~~~~~n~~v~VeCk~~a~NI~~~~~~d~~~G~v~f~l~i~  288 (289)
T TIGR01107       249 TNLTMNTEVRIECKIYGENIAYSNEKDRFLGRVDFKITIK  288 (289)
T ss_pred             ecCCCCcEEEEEEEEeccCCccCCCccccCCeEEEEEEec
Confidence            9999999999999999999999999999999999999997

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients.

>PF00287 Na_K-ATPase: Sodium / potassium ATPase beta chain; InterPro: IPR000402 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=4.2e-64  Score=447.00  Aligned_cols=170  Identities=50%  Similarity=1.002  Sum_probs=108.9

Q ss_pred             CCCcccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC--
Q psy7835          25 LGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT--  102 (205)
Q Consensus        25 ~~~~~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl--  102 (205)
                      ..++++++|++|||||||||+||||++||++|+|||||||+|||||||+||||||+|||+++|+||++    |++|||  
T Consensus         9 ~~~~~~~~~~~fl~n~~~~~~lGRT~~sW~~I~lFYlifY~~La~lfa~~m~v~l~tld~~~Pk~~~~----~~~PGL~~   84 (289)
T PF00287_consen    9 SRKQKWESFKRFLWNPETGEFLGRTGKSWGKILLFYLIFYAFLAALFAICMWVFLQTLDPDVPKYQDR----GSNPGLGF   84 (289)
T ss_dssp             -------------------TTS-SSSSTHHHHHHHHHTTHHHHHHHHHHHHHHHHHTSSSSS-S-STT----S-S--EEE
T ss_pred             ccccccchheeeeEcCCCCeEeccCcCccchhhhhHHHHHHHHHHHHHHHHHHHHHHCCCCCCceecc----cccceeee
Confidence            44578999999999999999999999999999999999999999999999999999999999999944    489999  


Q ss_pred             ----C------------C------------------------------C-------------------------------
Q psy7835         103 ----R------------K------------------------------G-------------------------------  105 (205)
Q Consensus       103 ----d------------~------------------------------g-------------------------------  105 (205)
                          +            +                              |                               
T Consensus        85 rP~~~~~s~~I~f~~s~~~s~~~yv~~L~~FL~~Y~~~~~~~~~~C~~g~~~~~~~~~~~~~~~~~C~F~~~~lg~Cs~~  164 (289)
T PF00287_consen   85 RPNPDTESTLISFNASDPSSYQPYVDRLDEFLKPYNDSSQKNNENCDPGQYFEQPDFGSPNPPKKACQFDRSWLGPCSGE  164 (289)
T ss_dssp             SS--TT--SEEEE-TT-SGGGHHHHHHHHHHHHCC-TTTS-SEE---S-S----SSSSSSSSS--EE---GGGSTTS---
T ss_pred             cCCCCcCcceEEEECCCchhHHHHHHHHHHHHHHhccccccccccCCCcceeecCccccCCCCCcEeEEechhhccCCCC
Confidence                1            0                              0                               


Q ss_pred             ------------------Cccccee----------eeeEeeeeCCCCCCCCCcceEEeCCC-CCCCcceeccC---CCCC
Q psy7835         106 ------------------NLTGNWR----------TIWVSCSGADPHDTETMGDVDYFPQP-GYPGYFYPYTN---TIGY  153 (205)
Q Consensus       106 ------------------N~~~Gw~----------~iwVsC~g~~~~d~e~ig~i~Y~P~~-gfp~~YfPY~n---q~~Y  153 (205)
                                        |+.|||.          .|||+|++++++|.+++|.|+|||.+ |||.+||||+|   |++|
T Consensus       165 ~d~~~GY~~g~PCI~lKlNri~gw~P~~~~~~~~~~i~v~C~~~~~~d~~~i~~i~y~P~~ggf~~~YfPy~~k~~~~~Y  244 (289)
T PF00287_consen  165 NDPTFGYSSGKPCIFLKLNRIIGWKPEPIDEYNSNKIWVSCEGENPEDKENIGPIEYYPSNGGFPLMYFPYYGKKAQPGY  244 (289)
T ss_dssp             -SSS----SSS-EEEEEE---BT---S-TT--TTTEEEEEEESSSSS---S---EEEE-STSEEEGGG-SB-TTTTSTT-
T ss_pred             CCCCccccCCCceEEEEcccccCccccccccccCCcceEEeeccccccccceeeEEEECCCCCcceeECCccCCccCCCC
Confidence                              0015555          69999999999999999999999999 89999999999   9999


Q ss_pred             CCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEE
Q psy7835         154 LSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFE  198 (205)
Q Consensus       154 ~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~  198 (205)
                      +||||||||+|+++|++|+|||||||+||+++++|++++|+|+||
T Consensus       245 ~~PlVAVqf~n~~~n~~i~veCk~wakNI~~d~~~~~~~G~V~F~  289 (289)
T PF00287_consen  245 LSPLVAVQFTNPPRNVEINVECKAWAKNIPYDDERDKFLGRVHFK  289 (289)
T ss_dssp             ----EEEEESSS-SSS-EEEEEEE-STT----SSS-TTSSB--EE
T ss_pred             cCCeEEEEEecCCCCcEEEEEEEEeCCCCCCCCcCCcccEEEEeC
Confidence            999999999999999999999999999999998899999999997

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the beta subunit found in the P-type cation exchange ATPases located in the plasma membranes of animal cells. These P-ATPases include both H+/K+-ATPases (3.6.3.10 from EC) and Na+/K+-ATPases (3.6.3.9 from EC), which belong to the IIC subfamily of ATPases [, ]. These ATPases catalyse the hydrolysis of ATP coupled with the exchange of cations, pumping one cation out of the cell (H+ or Na+) in exchange for K+. These ATPases contain an alpha subunit (IPR005775 from INTERPRO) that is the catalytic component, and a glycosylated beta subunit that regulates the number of sodium pumps transported to the plasma membrane through the assembly of alpha/beta heterodimers. The beta subunit has three highly conserved disulphide bonds within the extracellular domain that stabilise the alpha subunit, the alpha/beta interaction, and the catalytic activity of the alpha subunit []. Different beta isoforms exist, permitting greater regulatory control. An example of a H+/K+-ATPase is the gastric pump responsible for acid secretion in the stomach, transporting protons from the cytoplasm of parietal cells to create a large pH gradient in exchange for the internalisation of potassium ions, using ATP hydrolysis to drive the pump []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0005391 sodium:potassium-exchanging ATPase activity, 0006754 ATP biosynthetic process, 0006813 potassium ion transport, 0006814 sodium ion transport, 0016020 membrane; PDB: 2XZB_B 3A3Y_B 3N2F_D 3B8E_D 3KDP_D 3N23_D.

>KOG3927|consensus

Probab=100.00  E-value=2.2e-57  Score=405.02  Aligned_cols=182  Identities=44%  Similarity=0.882  Sum_probs=164.8

Q ss_pred             ceeeeccCCCCcccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccc
Q psy7835          17 EWEYARKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESII   96 (205)
Q Consensus        17 e~~~~~~~~~~~~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~I   96 (205)
                      |.++...+.++.++++|++|+||+++||++|||++||++|+|||++||++||||||+|||+|+|||||++|+|+ ++   
T Consensus         8 ~~k~~~~~~~~~~~~~~~~~~~n~~~~~~~GRT~~sW~~IllfYivFY~~la~lf~~~~~~~~~tidp~~P~~~-~~---   83 (300)
T KOG3927|consen    8 EYKLEGPELRREKPEEWKEFLYNPETGTFLGRTGSSWAKILLFYIVFYGVLAALFAGCMWFMLQTIDPKVPKYK-DS---   83 (300)
T ss_pred             cccccCcccccccchhhHHheeCcccCeEECcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc---
Confidence            33444467788889999999999999999999999999999999999999999999999999999999999999 65   


Q ss_pred             ccCCCC---------CC------------------------------C-------C-------c----------------
Q psy7835          97 GVNPVT---------RK------------------------------G-------N-------L----------------  107 (205)
Q Consensus        97 g~~PGl---------d~------------------------------g-------N-------~----------------  107 (205)
                      |++|||         |.                              |       |       |                
T Consensus        84 ~~~PGl~~~P~~~~~~~~~i~~~~~~~~~~~~~~~~i~~fL~kY~d~~~~~~~~~~~~~~~~~q~~~~~~~ckfd~~~f~  163 (300)
T KOG3927|consen   84 GANPGLSFRPNPPRTDSTLISFNPSDPKSYANYVDRIDDFLKKYNDNGQEPRMGVNIDNCWFYQPGTPTVACKFDLDGFG  163 (300)
T ss_pred             CCCCceeecCCCCcCcceeEEEeCCChhhHHHHHHHHHHHHHhhCcccccccccccCcccccccCCCCCceEEecHHHcC
Confidence            689999         10                              0       0       0                


Q ss_pred             -------------------------cccee------------eeeEeeeeCCCCCCCCCcceEEeCCCC-CCCcceecc-
Q psy7835         108 -------------------------TGNWR------------TIWVSCSGADPHDTETMGDVDYFPQPG-YPGYFYPYT-  148 (205)
Q Consensus       108 -------------------------~~Gw~------------~iwVsC~g~~~~d~e~ig~i~Y~P~~g-fp~~YfPY~-  148 (205)
                                               .+||+            .+||||+|+++.|.|+++.++|+|.+| ||++||||+ 
T Consensus       164 ~cs~~~d~~~Gy~~g~Pci~iklNri~G~~Pe~~~~~n~~~~~i~vsC~g~~~~D~e~i~~~~y~p~~g~f~~~Y~Py~g  243 (300)
T KOG3927|consen  164 NCSGSNDDNFGYSKGQPCIFLKLNRILGWKPELYNRPNKEPNVIWVSCEGKNPFDYENIGKVAYFPETGDFPLEYYPYYG  243 (300)
T ss_pred             cCccccCCCccccCCCceEEEEeeeecCCccccCCCcCcccCceeEEecccCccchhcccceeeeccCCCCCceecCccc
Confidence                                     15665            399999999999999999999999999 999999999 


Q ss_pred             --CCCCCCCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEeeC
Q psy7835         149 --NTIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLEWN  204 (205)
Q Consensus       149 --nq~~Y~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd~~  204 (205)
                        +|++|+||||||||+|+++|++|+|||||||+||.+  +++.+.|+|+|+|+|+..
T Consensus       244 k~~~~~y~~plvavkf~ni~~n~~v~IeCka~a~n~~~--~~~~~~g~V~f~l~i~~~  299 (300)
T KOG3927|consen  244 KKNQPGYLQPLVAVKFTNIPRNEEVNIECKAWAENINH--DRDTFGGRVRFELLIEPT  299 (300)
T ss_pred             cccCCCccCceEEEecCCCCCCceEEEEeecccccCcc--hhhhhcceEEEEEeccCC
Confidence              899999999999999999999999999999999887  899999999999999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	205
3ixz_B	290	Pig Gastric H+K+-Atpase Complexed With Aluminium Fl		2e-08
2zxe_B	305	Crystal Structure Of The Sodium - Potassium Pump In		4e-07
3a3y_B	305	Crystal Structure Of The Sodium-potassium Pump With		4e-07
3kdp_B	286	Crystal Structure Of The Sodium-potassium Pump Leng		1e-04

>pdb|3IXZ|B Chain B, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 290

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 22 RKDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMST 81
           K   + + + F+   +NP TG++ GRT   W  I L+YV FY +++ +FA+C+YVLM T
Sbjct: 6  EKKSCSQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMSGIFALCIYVLMRT 65
Query: 82 LTDEYPKLQ 90
          +    P  Q
Sbjct: 66 IDPYTPDYQ 74

>pdb|2ZXE|B Chain B, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 305

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 30 WQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKL 89
          W+ F   +++ +  E  GRT  SW  IFLFY+IFY  LA +F   + VL+ TL+D  PK 
Sbjct: 13 WKKF---LWDSEKKEFLGRTGSSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKY 69
Query: 90 Q 90
          Q
Sbjct: 70 Q 70

>pdb|3A3Y|B Chain B, Crystal Structure Of The Sodium-potassium Pump With Bound Potassium And Ouabain Length = 305

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 30 WQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKL 89
          W+ F   +++ +  E  GRT  SW  IFLFY+IFY  LA +F   + VL+ TL+D  PK 
Sbjct: 13 WKKF---LWDSEKKEFLGRTGSSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKY 69
Query: 90 Q 90
          Q
Sbjct: 70 Q 70

>pdb|3KDP|B Chain B, Crystal Structure Of The Sodium-potassium Pump Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 39 NPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQ 90
          N +  E  GRT  SW  I LFYVIFY  LA +F   + V++ T+++  P  Q
Sbjct: 1  NSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQ 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	205
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	3e-30
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	2e-20
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	2e-28
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	2e-17
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	2e-26
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	1e-19

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_B Length = 290

 Score =  112 bits (280), Expect = 3e-30
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 9/108 (8%)

Query: 104 KGNLTGNWR-----TIWVSCSGADPHDTETMGDVDYFPQPG-YPGYFYPYTNTI---GYL 154
           K N    +         V C+  D         V+YFP  G Y  +++PY        Y 
Sbjct: 182 KMNRIVKFLPGNSTAPRVDCAFLDQPRDGPPLQVEYFPANGTYSLHYFPYYGKKAQPHYS 241

Query: 155 SPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           +P++A +  N      + + C+  A+++ +       EG V F+L ++
Sbjct: 242 NPLVAAKLLNVPRNRDVVIVCKILAEHVSFDNPHDPYEGKVEFKLKIQ 289

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_B Length = 290

 Score = 85.9 bits (212), Expect = 2e-20
 Identities = 28/76 (36%), Positives = 43/76 (56%)

Query: 23 KDLGNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTL 82
          K   + + + F+   +NP TG++ GRT   W  I L+YV FY +++ +FA+C+YVLM T+
Sbjct: 7  KKSCSQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMSGIFALCIYVLMRTI 66

Query: 83 TDEYPKLQLDESIIGV 98
              P  Q      GV
Sbjct: 67 DPYTPDYQDQLKSPGV 82

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B* Length = 286

 Score =  107 bits (267), Expect = 2e-28
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 113 TIWVSCSGADPHDTETMGDVDYFPQPGYPGY---FYPYTNTI---GYLSPIIAVRFRNPG 166
            + V C+G    D E +G ++YF   GYPG+   +YPY   +    YL P++AV+F N  
Sbjct: 191 VLPVHCTGKRDEDKEKVGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLT 250

Query: 167 VGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202
           + T I +EC+A+ +NI Y +     +G    ++ ++
Sbjct: 251 MDTEIRIECKAYGENIGYSEK-DRFQGRFDVKIEVK 285

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B* Length = 286

 Score = 77.5 bits (190), Expect = 2e-17
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 39  NPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGV 98
           N +  E  GRT  SW  I LFYVIFY  LA +F   + V++ T+++  P  Q   +  G+
Sbjct: 1   NSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGL 60

Query: 99  NPVTR 103
             + +
Sbjct: 61  TQIPQ 65

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B* Length = 305

 Score =  101 bits (253), Expect = 2e-26
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 14/135 (10%)

Query: 74  CMYVLMSTLTDEYPKLQLDESIIGVNPVTRKGNLTGNWRTIWVSCSGADPHDTETMGDVD 133
           C+   ++ +   YPK   + + +   P   + N       + + C+     D E +G ++
Sbjct: 176 CVVAKLNRIIGFYPKPLKNTTDL---PEELQANYNQY--VLPLRCAAKREEDREKIGSIE 230

Query: 134 YFPQ---PGYPGYFYPYTN---TIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKS 187
           YF      G+P  +YPY        YL P++A++F N      + +EC+ + +NI Y + 
Sbjct: 231 YFGLGGYAGFPLQYYPYYGKRLQKKYLQPLLAIQFTNLTQNMELRIECKVYGENIDYSEK 290

Query: 188 GLNREGSVHFELLLE 202
                    FE+ +E
Sbjct: 291 ---DRFRGRFEVKIE 302

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B* Length = 305

 Score = 84.0 bits (207), Expect = 1e-19
 Identities = 27/70 (38%), Positives = 39/70 (55%)

Query: 29 KWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPK 88
              +K  +++ +  E  GRT  SW  IFLFY+IFY  LA +F   + VL+ TL+D  PK
Sbjct: 9  TDGGWKKFLWDSEKKEFLGRTGSSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPK 68

Query: 89 LQLDESIIGV 98
           Q   +  G+
Sbjct: 69 YQDRVAPPGL 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	205
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	100.0
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	100.0
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	100.0

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B

Probab=100.00  E-value=4.9e-66  Score=458.41  Aligned_cols=170  Identities=29%  Similarity=0.551  Sum_probs=154.4

Q ss_pred             ccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC------
Q psy7835          29 KWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT------  102 (205)
Q Consensus        29 ~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl------  102 (205)
                      ++++|++||||||||||||||++||++|+|||+|||+|||||||+||||||+|||+++|+|| |+.   ++|||      
T Consensus        13 ~~~~~k~f~~N~~t~~~lGRT~~sW~~IllFYliFY~~LaglFa~~m~v~l~Tld~~~Pkyq-d~~---~~PGL~~~P~~   88 (290)
T 3ixz_B           13 RMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMSGIFALCIYVLMRTIDPYTPDYQ-DQL---KSPGVTLRPDV   88 (290)
T ss_pred             hhhhhHhhEEcCCCCceeCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc-ccc---CCCcceecCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999 553   89998      


Q ss_pred             C---C----------------------------------------C----------------------------------
Q psy7835         103 R---K----------------------------------------G----------------------------------  105 (205)
Q Consensus       103 d---~----------------------------------------g----------------------------------  105 (205)
                      +   .                                        +                                  
T Consensus        89 ~~~~~~~I~f~~sd~~s~~~yv~~l~~FL~~Y~~~~q~~~~~C~~~~~~~q~~~~~~~~~~~~C~F~~~~lg~Csg~~d~  168 (290)
T 3ixz_B           89 YGEKGLDISYNVSDSTTWAGLAHTLHRFLAGYSPAAQEGSINCTSEKYFFQESFLAPNHTKFSCKFTADMLQNCSGRPDP  168 (290)
T ss_pred             CCCcceEEEEeCCCchHHHHHHHHHHHHHHHhCchhccCcccCCCccccccccccCCCCCCceeeccccccCcCCCCCCC
Confidence            1   0                                        0                                  


Q ss_pred             ---------------Cccccee-----eeeEeeeeCCCCCCCCCcceEEeCCC-CCCCcceecc---CCCCCCCceEEEE
Q psy7835         106 ---------------NLTGNWR-----TIWVSCSGADPHDTETMGDVDYFPQP-GYPGYFYPYT---NTIGYLSPIIAVR  161 (205)
Q Consensus       106 ---------------N~~~Gw~-----~iwVsC~g~~~~d~e~ig~i~Y~P~~-gfp~~YfPY~---nq~~Y~sPLVAVq  161 (205)
                                     |+.+||.     .|||+|++++++|.+++|+|+|||.+ |||++||||+   +|++|+|||||||
T Consensus       169 ~fGY~~g~PCI~iKlNrIig~~P~~~~~~~V~C~~~~~~~~~~~~~i~YyP~~ggf~~~YfPYygk~~q~~YlqPLVAVq  248 (290)
T 3ixz_B          169 TFGFAEGKPCFIIKMNRIVKFLPGNSTAPRVDCAFLDQPRDGPPLQVEYFPANGTYSLHYFPYYGKKAQPHYSNPLVAAK  248 (290)
T ss_pred             CCCcCCCCceEEEEeceEEeeecCCCCCCcceecCCCcccccCcceEEECCCCCCcCceeCCccCCcCCcCCcCCeEEEE
Confidence                           0015555     49999999987777788899999999 7999999999   7999999999999


Q ss_pred             eeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835         162 FRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE  202 (205)
Q Consensus       162 f~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd  202 (205)
                      |+|+++|++|+|||||||+||.+++++|+++|||+|+|+|+
T Consensus       249 f~n~~~n~~v~VeCk~~a~NI~~d~~~d~~~G~V~Fkl~i~  289 (290)
T 3ixz_B          249 LLNVPRNRDVVIVCKILAEHVSFDNPHDPYEGKVEFKLKIQ  289 (290)
T ss_pred             EecCCCCcEEEEEEEEeccCCccCCCCCCccceEEEEEEec
Confidence            99999999999999999999999878899999999999996

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*

Probab=100.00  E-value=4.7e-64  Score=448.35  Aligned_cols=170  Identities=31%  Similarity=0.581  Sum_probs=131.3

Q ss_pred             cccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC-----
Q psy7835          28 TKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT-----  102 (205)
Q Consensus        28 ~~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl-----  102 (205)
                      .++++|++|||||+|||+||||++||++|+|||+|||+|||||||+||||||+|||+++|+|| ++  | ++|||     
T Consensus         8 ~~~~~~k~f~~n~~~~~~lGRT~~sW~~IllFYliFY~~La~lF~~~m~v~l~tl~~~~Pk~q-~~--i-~~PGL~~~P~   83 (305)
T 2zxe_B            8 ETDGGWKKFLWDSEKKEFLGRTGSSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQ-DR--V-APPGLSHAPY   83 (305)
T ss_dssp             --------------------CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSCSCC-TT--T-CSCCBCCSSC
T ss_pred             cchhhhhhheeCcccCeEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccc-cC--C-CCCeeeEecC
Confidence            557899999999999999999999999999999999999999999999999999999999999 44  3 79999     


Q ss_pred             -----------CC----------------------C-C----------------c-------------------------
Q psy7835         103 -----------RK----------------------G-N----------------L-------------------------  107 (205)
Q Consensus       103 -----------d~----------------------g-N----------------~-------------------------  107 (205)
                                 |+                      + |                .                         
T Consensus        84 ~~~~~I~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q~~~~~~~~C~~~~~~~~~~g~~~~~~~~~~~C~F~~~~Lg~Cs~~  163 (305)
T 2zxe_B           84 AIKTEISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDCSDTPADYIKRGDLDDSQGQKKACRFSRMWLKNCSGL  163 (305)
T ss_dssp             CSSSEEEECTTCGGGTHHHHHHHHHHHGGGCGGGSCSTTTEECCCSSCCCCCCCSSSCSSSSSCCEECCCGGGSTTC---
T ss_pred             CCCeEEEEeCCChhhHHHHHHHHHHHHHHhcchhhccccccccCCCcccccccccccccCCCCCceeEeechhccCCCCC
Confidence                       00                      0 1                0                         


Q ss_pred             --------------------cccee---------------------eeeEeeeeCCCCCCCCCcceEEeCCC---CCCCc
Q psy7835         108 --------------------TGNWR---------------------TIWVSCSGADPHDTETMGDVDYFPQP---GYPGY  143 (205)
Q Consensus       108 --------------------~~Gw~---------------------~iwVsC~g~~~~d~e~ig~i~Y~P~~---gfp~~  143 (205)
                                          .+||.                     .|||+|++++++|.|++|+|+|||.+   |||++
T Consensus       164 ~d~~fGY~~g~PCI~lKlNrI~g~~P~~~~~~~lP~~~l~~~~~~~~I~v~C~~~~~~d~e~~g~i~Y~P~~g~~gfp~~  243 (305)
T 2zxe_B          164 DDTTYGYAEGKPCVVAKLNRIIGFYPKPLKNTTDLPEELQANYNQYVLPLRCAAKREEDREKIGSIEYFGLGGYAGFPLQ  243 (305)
T ss_dssp             -----CCCSSSCCCEEEBCCCBTCCCCCCCTTSCCTTTTTTCCTTTEEEEEEEC-----CCCCSCEEEECGGGCSEEEGG
T ss_pred             CCCCCCcCCCCCeEEEEecceecccccCCccccccHHHHhhhhccCCCceEeeccccccccccCCeEEECCCCCCCcCcc
Confidence                                14443                     26999999999999999999999998   89999


Q ss_pred             ceeccC---CCCCCCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835         144 FYPYTN---TIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE  202 (205)
Q Consensus       144 YfPY~n---q~~Y~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd  202 (205)
                      ||||+|   |++|+||||||||.|+++|++|+|||||||+||.++ +|++++|||+|+|+||
T Consensus       244 YfPY~gk~~~~~Yl~PLVAVqf~n~~~n~~v~VeCka~a~NI~~~-~~d~~~G~v~fkl~i~  304 (305)
T 2zxe_B          244 YYPYYGKRLQKKYLQPLLAIQFTNLTQNMELRIECKVYGENIDYS-EKDRFRGRFEVKIEVK  304 (305)
T ss_dssp             GCSBCCTTTCTTCCCCEEEEEECCSCCSSCEEEEEEECCSSCCCC-SSCTTSSBCCEEEEEC
T ss_pred             ccCCCCccCCcCCcCCeEEEEeecCCCCCEEEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence            999998   999999999999999999999999999999999664 8999999999999997

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*

Probab=100.00  E-value=3.2e-62  Score=433.27  Aligned_cols=159  Identities=33%  Similarity=0.614  Sum_probs=146.3

Q ss_pred             cCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC----------------
Q psy7835          39 NPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT----------------  102 (205)
Q Consensus        39 N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl----------------  102 (205)
                      |||||||||||++||++|+|||+|||+|||||||+||||||||||+++|+|| |++   ++|||                
T Consensus         1 Np~t~~~lGRT~~sW~~IllFYliFY~~La~lFa~~m~v~l~TLd~~~Pkyq-d~~---~~PGL~~~P~~~~~eI~f~~s   76 (286)
T 3kdp_B            1 NSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQ-DRV---APPGLTQIPQSQKTEISFRPN   76 (286)
T ss_dssp             CCCCCTTSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHGGGSCSCSSSCSCC-TTT---CSCCCCBSSCCSSSEEECCSS
T ss_pred             CCCCCceeCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCccc-CCC---CCCcceeccCCCceEEEEECC
Confidence            8999999999999999999999999999999999999999999999999999 877   89998                


Q ss_pred             CC-----------------------C-C--------------c-------------------------------------
Q psy7835         103 RK-----------------------G-N--------------L-------------------------------------  107 (205)
Q Consensus       103 d~-----------------------g-N--------------~-------------------------------------  107 (205)
                      |+                       + +              |                                     
T Consensus        77 d~~s~~~yv~~L~~FL~~Y~~~~q~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~  156 (286)
T 3kdp_B           77 DPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGERKVCRSRLEWLGNCSGLNDETYGYKDGK  156 (286)
T ss_dssp             CTTTTHHHHHHHHHHHTTCCTTTSCSTTTEECCCSSCCCCCCCCCSSSSSSSCCEECCCGGGSTTSCCCCSSSCCCCSSS
T ss_pred             ChhhHHHHHHHHHHHHHHhcchhhcccccccccccCcccceeccccccCCCCCceeEeccccccCCCCCCCCCCCcCCCC
Confidence            10                       0 1              0                                     


Q ss_pred             ---------cccee--e------------------eeEeeeeCCCCCCCCCcceEEeCCC---CCCCcceeccCC---CC
Q psy7835         108 ---------TGNWR--T------------------IWVSCSGADPHDTETMGDVDYFPQP---GYPGYFYPYTNT---IG  152 (205)
Q Consensus       108 ---------~~Gw~--~------------------iwVsC~g~~~~d~e~ig~i~Y~P~~---gfp~~YfPY~nq---~~  152 (205)
                               .+||+  .                  |||+|++++++|.|++|+|+|||.+   |||++||||+|+   ++
T Consensus       157 PCI~lKlNRIig~~P~~~~~~~~~~~p~~~l~~~~i~V~C~~~~~~d~e~ig~i~YyP~~g~~gfp~~YfPYygk~~~~~  236 (286)
T 3kdp_B          157 PCVIIKLNRVLGFKPKPPKNESLETYPVMKYNPYVLPVHCTGKRDEDKEKVGTMEYFGLGGYPGFPLQYYPYYGKLLQPK  236 (286)
T ss_dssp             CCBCBCCCCCBTCCCCCCCSSSCSSCSSSCCTTTBCCEEEESSSSSCCCCCCCBCCCCTTSCSSCBTTSCSBCTTTSCTT
T ss_pred             CeEEEEeccccceeecccCCCCcccccchhccCCceeeeccCcCccccccccceEEcCCCCCCCCCcccCCCCCCcCCCC
Confidence                     15554  1                  6999999999999999999999997   599999999997   99


Q ss_pred             CCCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835         153 YLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE  202 (205)
Q Consensus       153 Y~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd  202 (205)
                      |+||||||||.|+++|++|+|||||||+||.++ +|++++|||+|+|+|.
T Consensus       237 YlqPLVAVqf~n~~~n~~v~VeCk~~a~NI~~~-~~d~~~G~v~fkl~i~  285 (286)
T 3kdp_B          237 YLQPLMAVQFTNLTMDTEIRIECKAYGENIGYS-EKDRFQGRFDVKIEVK  285 (286)
T ss_dssp             CCCCCCCBCBCCSCCSCCCCBEEEECSTTCCCC-SSCTTTTSCCBEEECC
T ss_pred             CcCCeEEEEeecCCCCcEEEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence            999999999999999999999999999999996 8999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00