Psyllid ID: psy8121

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGLV
ccccccccccccccHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHEHHEEcHHHcHHHHHHHHHHHHHHccccEEEEEEccEEEEEEcccccccEEEEEccccEEcccEEEEEcccEEEEcccccccccccccccccccEEEEccEEEEEEEEEEEEEEccccHHHHHHHHHccccccccHHHHHHHHcccc
cccEccccccccccHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHcccEEEEEEccEEEEEEHHHEccccEEEEEccccccccEEEEEcccEEEEccccccccccEEEccccccEEEEcccEEccccEEEEEEcccccHHHHHHHHHHcccccccHHHHHHHccccc
matvdgrpaqygVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLytspseglsgsaadmehrrdtfgsntippkppktFLTLVWEALQDVTLIILEIAALVSLGlsfykpadedvfdddeakhGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRqgevkqisvgdivvgdicqikygdllpadgcliqsndlkvdessltgesdhvkkgeafdpmvlsgthvmegsGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGLV
matvdgrpaqygvtLRQLRELMEHRGREgiakvnelggIQEICKKLYTSPSEGLSGSAADMEHRRDTfgsntippkppKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKfsvirqgevkqisvGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLtgesdhvkkgeafDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEqeikkkrkvglv
MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAilisvivvvivTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGLV
***********GVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLY********************************TFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSND***********************MVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAV****************
**********YGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSE*L*****DMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRG*****E*EHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGI******************KR*VGLV
MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQ*************
*********QYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE*****DEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGLV
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MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query285 2.2.26 [Sep-21-2011]
Q16720 1220 Plasma membrane calcium-t yes N/A 0.901 0.210 0.656 4e-97
Q64568 1258 Plasma membrane calcium-t yes N/A 0.901 0.204 0.656 4e-97
P58165 1112 Plasma membrane calcium-t N/A N/A 0.915 0.234 0.663 2e-94
P23634 1241 Plasma membrane calcium-t no N/A 0.929 0.213 0.648 5e-94
Q01814 1243 Plasma membrane calcium-t no N/A 0.905 0.207 0.665 2e-92
Q9R0K7 1198 Plasma membrane calcium-t no N/A 0.905 0.215 0.665 3e-92
P11506 1243 Plasma membrane calcium-t no N/A 0.905 0.207 0.661 5e-92
Q64542 1203 Plasma membrane calcium-t no N/A 0.905 0.214 0.657 3e-91
P11505 1258 Plasma membrane calcium-t no N/A 0.901 0.204 0.674 5e-87
P20020 1258 Plasma membrane calcium-t no N/A 0.901 0.204 0.674 5e-87
>sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3 Back     alignment and function desciption
 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/268 (65%), Positives = 211/268 (78%), Gaps = 11/268 (4%)

Query: 11  YGVTLRQLRELMEHRGREGIAKVNE-LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFG 69
           +G TL +LR LME RG E + K+ E  G +  +C++L TSP+EGL+ +  D+E RR  +G
Sbjct: 27  FGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG 86

Query: 70  SNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADED----------VFD 119
            N IPPK PKTFL LVWEALQDVTLIILE+AA+VSLGLSFY P  E+            D
Sbjct: 87  QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAED 146

Query: 120 DDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQI 179
           + EA+ GWIEG AIL+SVI VV+VTAFND++KE+QFRGLQSRIE E KF+VIR G++ Q+
Sbjct: 147 EGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQV 206

Query: 180 SVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTH 239
            V  +VVGDI Q+KYGDLLPADG LIQ+NDLK+DESSLTGESDHV+K    DPM+LSGTH
Sbjct: 207 PVAALVVGDIAQVKYGDLLPADGVLIQANDLKIDESSLTGESDHVRKSADKDPMLLSGTH 266

Query: 240 VMEGSGKMLVTAVGVNSQAGIIFTLLGA 267
           VMEGSG+M+VTAVGVNSQ GIIFTLLGA
Sbjct: 267 VMEGSGRMVVTAVGVNSQTGIIFTLLGA 294
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8
>sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2 Back     alignment and function description
>sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1 Back     alignment and function description
>sp|P23634|AT2B4_HUMAN Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2 Back     alignment and function description
>sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2 Back     alignment and function description
>sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2 Back     alignment and function description
>sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2 Back     alignment and function description
>sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1 Back     alignment and function description
>sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2 Back     alignment and function description
>sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
380018752 1189 PREDICTED: plasma membrane calcium-trans 0.968 0.232 0.870 1e-140
350411677 1193 PREDICTED: plasma membrane calcium-trans 0.968 0.231 0.856 1e-138
340729533 1193 PREDICTED: plasma membrane calcium-trans 0.968 0.231 0.856 1e-138
332020943 1174 Plasma membrane calcium-transporting ATP 0.985 0.239 0.881 1e-138
328724397 1170 PREDICTED: plasma membrane calcium-trans 0.982 0.239 0.875 1e-137
328724399 1218 PREDICTED: plasma membrane calcium-trans 0.982 0.229 0.875 1e-137
328724395 1081 PREDICTED: plasma membrane calcium-trans 0.982 0.259 0.875 1e-137
345479817 1259 PREDICTED: LOW QUALITY PROTEIN: plasma m 0.968 0.219 0.885 1e-137
91093563 1113 PREDICTED: similar to CG2165 CG2165-PE i 0.985 0.252 0.868 1e-137
383859194 1199 PREDICTED: plasma membrane calcium-trans 0.968 0.230 0.892 1e-137
>gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea] Back     alignment and taxonomy information
 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/279 (87%), Positives = 262/279 (93%), Gaps = 3/279 (1%)

Query: 1   MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAAD 60
           MAT+DGRP QYG++L+QLRELME RGREG+ KVN  GG+QEICKKLYTSPSEGLSGSAAD
Sbjct: 1   MATIDGRPTQYGISLKQLRELMELRGREGVTKVNSYGGVQEICKKLYTSPSEGLSGSAAD 60

Query: 61  MEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADED---V 117
           ++HRRDTFGSN IPPKPPKTFL LVWEALQDVTLIILE+AALVSLGLSFY PAD++   +
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPADDEEKPL 120

Query: 118 FDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVK 177
            D+DEAK+GWIEG AI ISVI+VVIVTA NDY+KE+QFRGLQSRIEGEHKFSVIRQGEVK
Sbjct: 121 IDEDEAKYGWIEGAAIFISVILVVIVTASNDYSKEKQFRGLQSRIEGEHKFSVIRQGEVK 180

Query: 178 QISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSG 237
           QISV DIVVGDICQIKYGDLLPADG LIQSNDLKVDESSLTGESDHVKKGE+FDPMVLSG
Sbjct: 181 QISVADIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGESFDPMVLSG 240

Query: 238 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEI 276
           THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVD+QEQEI
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEI 279

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350411677|ref|XP_003489420.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340729533|ref|XP_003403055.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|332020943|gb|EGI61337.1| Plasma membrane calcium-transporting ATPase 3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328724397|ref|XP_003248135.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328724399|ref|XP_001945158.2| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328724395|ref|XP_003248134.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345479817|ref|XP_003424034.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane calcium-transporting ATPase 3-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|91093563|ref|XP_975749.1| PREDICTED: similar to CG2165 CG2165-PE isoform 2 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|383859194|ref|XP_003705081.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 5 [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
FB|FBgn0259214 1255 PMCA "plasma membrane calcium 0.985 0.223 0.823 1.7e-121
UNIPROTKB|F1NX46 1218 ATP2B1 "Plasma membrane calciu 0.982 0.229 0.634 1.6e-88
UNIPROTKB|E1BRG6 1256 ATP2B1 "Plasma membrane calciu 0.982 0.222 0.634 2.7e-88
UNIPROTKB|F1PHQ7 1206 ATP2B4 "Uncharacterized protei 0.992 0.234 0.605 1.1e-87
UNIPROTKB|E1C784 1208 ATP2B4 "Uncharacterized protei 0.957 0.225 0.626 1.8e-87
UNIPROTKB|E1C785 1247 ATP2B4 "Uncharacterized protei 0.957 0.218 0.626 3.3e-87
ZFIN|ZDB-GENE-061027-60 1174 atp2b4 "ATPase, Ca++ transport 0.985 0.239 0.621 3.7e-87
UNIPROTKB|P23634 1241 ATP2B4 "Plasma membrane calciu 0.982 0.225 0.608 3.9e-87
UNIPROTKB|J9P8P9 1176 ATP2B1 "Uncharacterized protei 0.950 0.230 0.629 4.3e-86
UNIPROTKB|F1MS16 1206 ATP2B3 "Uncharacterized protei 0.950 0.224 0.620 4.9e-86
FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
 Identities = 233/283 (82%), Positives = 251/283 (88%)

Query:     1 MATVDGRPAQYGVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAAD 60
             MAT+DGRPAQYG++L+QLRELMEHRGREG+ K+ E GGI E+CKKLYTSP+EGLSGS AD
Sbjct:     1 MATIDGRPAQYGISLKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSKAD 60

Query:    61 MEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADED--VF 118
              EHRR+TFGSN IPPKPPKTFLTLVWEALQDVTLIILE+AALVSLGLSFYKPADED  V 
Sbjct:    61 EEHRRETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVL 120

Query:   119 DDDEAKHGWIEGLAXXXXXXXXXXXTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQ 178
              ++E  HGWIEGLA           TAFNDY+KERQFRGLQ+RIEGEHKFSVIR GEV Q
Sbjct:   121 QEEEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGEHKFSVIRGGEVCQ 180

Query:   179 ISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGT 238
             ISVGDI+VGDI Q+KYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKG   DPMVLSGT
Sbjct:   181 ISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGT 240

Query:   239 HVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRK 281
             HVMEGSGKM+VTAVGVNSQAGIIFTLLGAAVDEQE EIKK +K
Sbjct:   241 HVMEGSGKMVVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKK 283
GO:0005388 "calcium-transporting ATPase activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISS;IDA
GO:0046872 "metal ion binding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0070588 "calcium ion transmembrane transport" evidence=IEA
GO:0006874 "cellular calcium ion homeostasis" evidence=IMP
UNIPROTKB|F1NX46 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BRG6 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PHQ7 ATP2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1C784 ATP2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C785 ATP2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061027-60 atp2b4 "ATPase, Ca++ transporting, plasma membrane 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P23634 ATP2B4 "Plasma membrane calcium-transporting ATPase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P8P9 ATP2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MS16 ATP2B3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q64568AT2B3_RAT3, ., 6, ., 3, ., 80.65670.90170.2042yesN/A
Q16720AT2B3_HUMAN3, ., 6, ., 3, ., 80.65670.90170.2106yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 3e-97
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 1e-37
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 2e-31
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 9e-22
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 5e-21
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 6e-20
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 3e-19
TIGR01106 997 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux 5e-19
pfam0069069 pfam00690, Cation_ATPase_N, Cation transporter/ATP 1e-17
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 2e-17
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 2e-15
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 4e-14
smart0083175 smart00831, Cation_ATPase_N, Cation transporter/AT 1e-12
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 2e-12
TIGR01525 556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 3e-12
TIGR01512 536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 8e-10
TIGR01511 572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 1e-09
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 2e-08
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 6e-07
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 1e-06
COG2216 681 COG2216, KdpB, High-affinity K+ transport system, 0.001
TIGR01497 675 TIGR01497, kdpB, K+-transporting ATPase, B subunit 0.002
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information 
 Score =  305 bits (783), Expect = 3e-97
 Identities = 122/234 (52%), Positives = 159/234 (67%), Gaps = 5/234 (2%)

Query: 35  ELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTL 94
           +LGG + I  KL T  +EG+  S++ +E R   +G N +P KPPK+FL +VW AL D TL
Sbjct: 41  KLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTL 100

Query: 95  IILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQ 154
           I+L +AA+VSL L   +P +       + + GWIEG+AIL+SVI+VV+VTA NDY KE Q
Sbjct: 101 ILLSVAAVVSLVLGLPEPGE----GKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQ 156

Query: 155 FRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDE 214
           FR L  R +   K +VIR G+ +QIS+ DIVVGDI  +  GD++PADG  I    L++DE
Sbjct: 157 FRQLN-REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDE 215

Query: 215 SSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAA 268
           SS+TGESD +KKG   DP +LSGT V EGSG+MLVTAVGVNS  G +   L  A
Sbjct: 216 SSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQA 269

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 285
KOG0204|consensus 1034 100.0
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 100.0
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 100.0
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 100.0
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 100.0
KOG0202|consensus 972 100.0
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 100.0
PRK15122 903 magnesium-transporting ATPase; Provisional 100.0
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 100.0
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 100.0
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 100.0
KOG0205|consensus 942 100.0
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 100.0
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 100.0
KOG0203|consensus 1019 100.0
PRK14010 673 potassium-transporting ATPase subunit B; Provision 100.0
PRK01122 679 potassium-transporting ATPase subunit B; Provision 100.0
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 100.0
TIGR01512 536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 100.0
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 100.0
TIGR01511 562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 100.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 99.98
KOG0208|consensus 1140 99.98
TIGR01525 556 ATPase-IB_hvy heavy metal translocating P-type ATP 99.97
PRK10671 834 copA copper exporting ATPase; Provisional 99.97
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 99.97
KOG0207|consensus 951 99.96
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 99.94
KOG0209|consensus 1160 99.94
TIGR01494 499 ATPase_P-type ATPase, P-type (transporting), HAD s 99.94
PLN03190 1178 aminophospholipid translocase; Provisional 99.89
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 99.86
PF0069069 Cation_ATPase_N: Cation transporter/ATPase, N-term 99.56
KOG0210|consensus 1051 99.52
KOG0206|consensus 1151 99.44
smart0083164 Cation_ATPase_N Cation transporter/ATPase, N-termi 99.41
KOG4383|consensus 1354 95.04
COG0272 667 Lig NAD-dependent DNA ligase (contains BRCT domain 82.74
>KOG0204|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.8e-53  Score=400.98  Aligned_cols=260  Identities=58%  Similarity=0.894  Sum_probs=245.3

Q ss_pred             ccCHHHHHHHHHhcChhhHHHHHhhcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhh
Q psy8121          12 GVTLRQLRELMEHRGREGIAKVNELGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQD   91 (285)
Q Consensus        12 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~   91 (285)
                      +++.|+|..+.+.++.+   .++.+++++++|+.|+|+|..||+++.++..+|++.||.|.+|++++++||+++|+++++
T Consensus        79 ~i~~e~l~~i~~~~~~~---~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD  155 (1034)
T KOG0204|consen   79 GIGAEELVKIVKEHDLK---ALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQD  155 (1034)
T ss_pred             ccCHHHHHHHhhccchh---hhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhcc
Confidence            66779999999999865   478999999999999999999999888999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhhccCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEE
Q psy8121          92 VTLIILEIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVI  171 (285)
Q Consensus        92 ~~~~ll~~~ai~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~  171 (285)
                      .++++|.++|++|+.+++|.+..         ..+|++++.|+++++++++++++.+|++++++++|++ .....++.|+
T Consensus       156 ~TLiIL~vaAvvSl~lgi~~~g~---------~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~-~k~~~k~~Vi  225 (1034)
T KOG0204|consen  156 VTLIILMVAAVVSLGLGIYTPGI---------EDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQK-EKRNIKFQVI  225 (1034)
T ss_pred             chHHHHHHHHHHHHhhhhccCCC---------CcccccchhheeeEEEEEEEeecchhHHhhhhhhhhh-hhhceEEEEE
Confidence            99999999999999999997642         3489999999999988889999999999999999995 4445789999


Q ss_pred             ECCEEEEEEcCCcccCcEEEecCCCeeeccEEEEeeCceeEeccccCCCCCceeccCCCCCeEeeccEeeeeeEEEEEEE
Q psy8121         172 RQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTA  251 (285)
Q Consensus       172 rdg~~~~i~~~~lv~GDiv~l~~G~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~  251 (285)
                      |||+.++|+..|||||||+.++.||.+||||++++|+++.+|||+|||||.++.|....++++++||.+++|+++++|++
T Consensus       226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa  305 (1034)
T KOG0204|consen  226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA  305 (1034)
T ss_pred             ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             ecCccHHHHHHHHHhhcccccchHHHHHhhhcC
Q psy8121         252 VGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVGL  284 (285)
Q Consensus       252 tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
                      +|.+|++|+++.++.+..++++|+|-+++++|.
T Consensus       306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~  338 (1034)
T KOG0204|consen  306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLAT  338 (1034)
T ss_pred             eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHH
Confidence            999999999999999999999999999999874

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>KOG0202|consensus Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0205|consensus Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>KOG0203|consensus Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>KOG0208|consensus Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG0207|consensus Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>KOG0209|consensus Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG0210|consensus Back     alignment and domain information
>KOG0206|consensus Back     alignment and domain information
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus Back     alignment and domain information
>KOG4383|consensus Back     alignment and domain information
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
3tlm_A 992 Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp 4e-12
3ba6_A 994 Structure Of The Ca2e1p Phosphoenzyme Intermediate 5e-12
2dqs_A 995 Crystal Structure Of The Calcium Pump With Amppcp I 5e-12
1kju_A 994 Ca2+-Atpase In The E2 State Length = 994 5e-12
3b8e_A 998 Crystal Structure Of The Sodium-Potassium Pump Leng 3e-10
3n23_A 992 Crystal Structure Of The High Affinity Complex Betw 3e-10
2zxe_A 1028 Crystal Structure Of The Sodium - Potassium Pump In 1e-09
3b8c_A 885 Crystal Structure Of A Plasma Membrane Proton Pump 1e-09
1mhs_A 920 Model Of Neurospora Crassa Proton Atpase Length = 9 3e-09
3ixz_A 1034 Pig Gastric H+K+-Atpase Complexed With Aluminium Fl 3e-09
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 Back     alignment and structure 
Iteration: 1

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 47  YTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLG 106
           Y   SE    +   ++   + +G N +P +  K+   LV E  +D+ + IL +AA +S  
Sbjct: 15  YFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDLLVRILLLAACISFV 74
Query: 107 LSFYKPADEDVFDDDEAKHGWIEGLAXXXXXXXXXXXTAFNDYTKERQFRGLQSRIEGEH 166
           L++++  +E V         ++E                + +   E     L+       
Sbjct: 75  LAWFEEGEETV-------TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 127
Query: 167 KFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCL--IQSNDLKVDESSLTGESDHV 224
           K     +  V++I   DIV GDI ++  GD +PAD  +  I+S  L+VD+S LTGES  V
Sbjct: 128 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSILTGESVSV 187
Query: 225 KKGEAFDP-----------MVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQE 273
            K     P           M+ SGT++  G    +V   GV ++ G I   + AA ++ +
Sbjct: 188 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQM-AATEQDK 246
Query: 274 QEIKKK 279
             +++K
Sbjct: 247 TPLQQK 252
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 Back     alignment and structure
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 Back     alignment and structure
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 Back     alignment and structure
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 Back     alignment and structure
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 Back     alignment and structure
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 Back     alignment and structure
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 Back     alignment and structure
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 Back     alignment and structure
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 6e-47
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 5e-46
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-40
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 5e-40
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 5e-37
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 2e-10
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 6e-10
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 8e-10
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 1e-09
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 1e-06
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
 Score =  167 bits (425), Expect = 6e-47
 Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 33/258 (12%)

Query: 39  IQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILE 98
           + E+  K  T  + GL+ + A  +      G N++ P P           L     I+L 
Sbjct: 53  LDELHNKYGTDLTRGLTNARA--KEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110

Query: 99  IAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQ---- 154
           I A++       + A ED   +D        G+ +      VVIVT    Y +E +    
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDN----LYLGVVLST----VVIVTGCFSYYQEAKSSRI 162

Query: 155 ---FRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLK 211
              F+ +        +  VIR GE   I+   +V GD+ ++K GD +PAD  +I ++  K
Sbjct: 163 MDSFKNMVP-----QQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCK 217

Query: 212 VDESSLTGESDHVKKGEAFDP--------MVLSGTHVMEGSGKMLVTAVGVNSQAGIIFT 263
           VD SSLTGES+   +   F          +    T+ +EG+ + +V   G  +  G I T
Sbjct: 218 VDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIAT 277

Query: 264 LLGAAVDEQ---EQEIKK 278
           L       +     EI+ 
Sbjct: 278 LASGLEVGRTPIAIEIEH 295
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 100.0
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 100.0
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 100.0
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 100.0
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 100.0
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 100.0
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 99.98
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 99.97
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 99.97
2jmz_A186 Hypothetical protein MJ0781; unknown function; NMR 84.05
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
Probab=100.00  E-value=1e-45  Score=377.93  Aligned_cols=240  Identities=24%  Similarity=0.285  Sum_probs=215.9

Q ss_pred             hcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy8121          36 LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE  115 (285)
Q Consensus        36 ~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~  115 (285)
                      ..+++++++.|++++.+|||  ++|+++|+++||+|+++.++++++|+.++++|++++.++|+++++++++...+....+
T Consensus        55 ~~~~~~~~~~l~~~~~~GLs--~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~  132 (1034)
T 3ixz_A           55 QLSVAELEQKYQTSATKGLS--ASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG  132 (1034)
T ss_pred             hCCHHHHHHHhCCCcccCCC--HHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence            46999999999999989999  9999999999999999999899999999999999999999999998887754432111


Q ss_pred             CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCC
Q psy8121         116 DVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYG  195 (285)
Q Consensus       116 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G  195 (285)
                      +    ......|+++++++++++++.++++++++++++++++|+++.+  ++++|+|||++++|++++|||||||.|++|
T Consensus       133 ~----~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~--~~a~ViRdG~~~~I~~~eLv~GDiV~l~~G  206 (1034)
T 3ixz_A          133 D----LTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVP--QQATVIRDGDKFQINADQLVVGDLVEMKGG  206 (1034)
T ss_pred             C----CccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCC--CeeEEEECCEEEEEEHHHCCCCcEEEEcCC
Confidence            0    0112357888888888888999999999999999999999865  789999999999999999999999999999


Q ss_pred             CeeeccEEEEeeCceeEeccccCCCCCceeccCC--------CCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhh
Q psy8121         196 DLLPADGCLIQSNDLKVDESSLTGESDHVKKGEA--------FDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGA  267 (285)
Q Consensus       196 ~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~--------~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~  267 (285)
                      |+|||||+|++++++.||||+|||||.|+.|.++        ..|++|+||.+.+|+++++|++||.+|++|+|.++++.
T Consensus       207 d~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~  286 (1034)
T 3ixz_A          207 DRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG  286 (1034)
T ss_pred             ceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcc
Confidence            9999999999998889999999999999999764        34789999999999999999999999999999999999


Q ss_pred             cccccchHHHHHhhhc
Q psy8121         268 AVDEQEQEIKKKRKVG  283 (285)
Q Consensus       268 ~~~~~~~~~~~~~~~~  283 (285)
                      ++..++|+|+++++++
T Consensus       287 ~~~~~tpl~~~~~~~~  302 (1034)
T 3ixz_A          287 VENEKTPIAIEIEHFV  302 (1034)
T ss_pred             cccCCCcHHHHHHHHH
Confidence            9999999999998875
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 285
d1wpga4 472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 4e-22
d1wpga1115 b.82.7.1 (A:125-239) Calcium ATPase, transduction 4e-16
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 93.2 bits (231), Expect = 4e-22
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 23/168 (13%)

Query: 38  GIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIIL 97
             +E       S + GL+      +   + +G N +P +  K+   LV E  +D+ + IL
Sbjct: 8   STEECLAYFGVSETTGLTPDQV--KRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65

Query: 98  EIAALVSLGLSFYKPADEDVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRG 157
            +AA +S  L++++  +E +         ++E   IL+ +I   IV  + +   E     
Sbjct: 66  LLAACISFVLAWFEEGEETITA-------FVEPFVILLILIANAIVGVWQERNAENAIEA 118

Query: 158 LQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLI 205
           L+       +               D         ++G+ L     LI
Sbjct: 119 LKEYEPAATE--------------QDKTPLQQKLDEFGEQLSKVISLI 152
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
d1wpga1115 Calcium ATPase, transduction domain A {Rabbit (Ory 99.97
d1wpga4 472 Calcium ATPase, transmembrane domain M {Rabbit (Or 99.75
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=2.4e-31  Score=201.54  Aligned_cols=99  Identities=35%  Similarity=0.479  Sum_probs=90.2

Q ss_pred             eEEEEECCEE--EEEEcCCcccCcEEEecCCCeeeccEEEEee--CceeEeccccCCCCCceeccCC-----------CC
Q psy8121         167 KFSVIRQGEV--KQISVGDIVVGDICQIKYGDLLPADGCLIQS--NDLKVDESSLTGESDHVKKGEA-----------FD  231 (285)
Q Consensus       167 ~~~V~rdg~~--~~i~~~~lv~GDiv~l~~G~~iPaDg~il~g--~~l~vdeS~LTGEs~pv~k~~~-----------~~  231 (285)
                      .++|+|+|++  ++|++++|||||||.|++|++|||||+|+++  .++.||||+|||||.|+.|.+.           ..
T Consensus         2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~   81 (115)
T d1wpga1           2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK   81 (115)
T ss_dssp             EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred             ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence            4789999985  6899999999999999999999999999864  3478999999999999999752           35


Q ss_pred             CeEeeccEeeeeeEEEEEEEecCccHHHHHHHHH
Q psy8121         232 PMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLL  265 (285)
Q Consensus       232 ~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~  265 (285)
                      |++|+||.|.+|+++++|++||.+|++|+|.+++
T Consensus        82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i  115 (115)
T d1wpga1          82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM  115 (115)
T ss_dssp             TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred             ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence            7899999999999999999999999999999875
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure