Psyllid ID: psy8417

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MGAIPISEIVVIYPVTIARTNGIMSTQQSPTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ
ccccccccEEEEccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccc
cccEEccEEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEEcccccccccccccHEEEEHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHcHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHccHHcccccHHHHHHccHHHHHHHHHHHHHccccccccccccccccccc
mgaipiseIVVIYPVTiartngimstqqspTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSkkrevvpdlapmLWHSFGTIAALLQEIINiyptinpatltahqSNRVCNALALLQCVASHQETRSLFLAAhiplflypflhttsktrpfeyLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKIllddsglsyiCQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQClpdqlrdstfsvclnddkSTKNWLAQLIKNLESVSAGVvlgagnnlapq
mgaipiseIVVIYPVTIARTNGIMSTQQSPTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRqclpdqlrdstFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ
MGAIPISEIVVIYPVTIARTNGIMstqqsptvlqqqqALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ
***IPISEIVVIYPVTIARTNGIMST****TVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGA*******
****PIS****************************************YQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKN*******************
MGAIPISEIVVIYPVTIARTNGIMSTQQSPTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ
*GAIPISEIVVIYPVTIART********************PVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLES****************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGAIPISEIVVIYPVTIARTNGIMSTQQSPTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q5PQL2299 Cell differentiation prot yes N/A 0.880 0.959 0.840 1e-139
Q9JKY0299 Cell differentiation prot yes N/A 0.880 0.959 0.840 1e-139
Q4R347299 Cell differentiation prot N/A N/A 0.880 0.959 0.840 1e-139
A7MB47299 Cell differentiation prot yes N/A 0.880 0.959 0.840 1e-139
Q5R6Z6299 Cell differentiation prot yes N/A 0.886 0.966 0.824 1e-139
Q92600299 Cell differentiation prot yes N/A 0.886 0.966 0.824 1e-139
Q6P819299 Cell differentiation prot yes N/A 0.880 0.959 0.837 1e-139
Q6IP65299 Cell differentiation prot N/A N/A 0.880 0.959 0.837 1e-139
Q6NWL4298 Cell differentiation prot yes N/A 0.834 0.912 0.863 1e-137
Q92368283 Cell differentiation prot yes N/A 0.815 0.939 0.680 1e-101
>sp|Q5PQL2|RCD1_RAT Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1 Back     alignment and function desciption
 Score =  495 bits (1275), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/289 (84%), Positives = 258/289 (89%), Gaps = 2/289 (0%)

Query: 38  ALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIIN 97
           AL  V+REKIYQWI ELS PETRENALLELSKKRE VPDLAPMLWHSFGTIAALLQEI+N
Sbjct: 13  ALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVN 72

Query: 98  IYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPF 157
           IYP+INP TLTAHQSNRVCNALALLQCVASH ETRS FLAAHIPLFLYPFLHT SKTRPF
Sbjct: 73  IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPF 132

Query: 158 EYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD 217
           EYLRLTSLGVIGALVKTDEQEVI FLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD
Sbjct: 133 EYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD 192

Query: 218 DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQC 277
           D+GL+YICQTY+RFSHVAMILGKMV+ L K+ S+RLLKHVVRCYLRLSDN RAREALRQC
Sbjct: 193 DTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQC 252

Query: 278 LPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVSAGVVLGAGNNLAPQ 326
           LPDQL+D+TF+  L DD +TK WLAQL+KNL+     V    G  L PQ
Sbjct: 253 LPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQ--EGQVTDPRGIPLPPQ 299
Transcription factor that down-regulates MYB- and JUN-dependent transcription. May play a role in cell differentiation.
Rattus norvegicus (taxid: 10116)
>sp|Q9JKY0|RCD1_MOUSE Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1 Back     alignment and function description
>sp|Q4R347|RCD1_MACFA Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1 Back     alignment and function description
>sp|A7MB47|RCD1_BOVIN Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1 Back     alignment and function description
>sp|Q5R6Z6|RCD1_PONAB Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2 Back     alignment and function description
>sp|Q92600|RCD1_HUMAN Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1 Back     alignment and function description
>sp|Q6P819|RCD1_XENTR Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1 Back     alignment and function description
>sp|Q6IP65|RCD1_XENLA Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1 Back     alignment and function description
>sp|Q6NWL4|RCD1_DANRE Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1 Back     alignment and function description
>sp|Q92368|RCD1_SCHPO Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rcd1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
170036667299 cell differentiation protein rcd1 [Culex 0.868 0.946 0.861 1e-141
157114475300 hypothetical protein AaeL_AAEL006867 [Ae 0.871 0.946 0.858 1e-141
242009872305 Cell differentiation protein rcd1, putat 0.892 0.954 0.834 1e-141
322793381307 hypothetical protein SINV_08170 [Solenop 0.865 0.918 0.864 1e-141
332025376308 Cell differentiation protein RCD1-like p 0.865 0.915 0.857 1e-140
328793536310 PREDICTED: cell differentiation protein 0.865 0.909 0.857 1e-140
307169683306 Cell differentiation protein RCD1-like p 0.861 0.918 0.853 1e-140
91082299297 PREDICTED: similar to cell differentiati 0.889 0.976 0.831 1e-139
307209270307 Cell differentiation protein RCD1-like p 0.861 0.915 0.856 1e-139
340723059310 PREDICTED: cell differentiation protein 0.865 0.909 0.853 1e-139
>gi|170036667|ref|XP_001846184.1| cell differentiation protein rcd1 [Culex quinquefasciatus] gi|167879497|gb|EDS42880.1| cell differentiation protein rcd1 [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/289 (86%), Positives = 262/289 (90%), Gaps = 6/289 (2%)

Query: 24  MSTQQSPTVLQQQQALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWH 83
           M+TQQSP  LQ   +      EK++QWI ELS PETRE ALLELSKKRE VPDLAPMLWH
Sbjct: 1   MATQQSPANLQAANS------EKVFQWINELSNPETRETALLELSKKRESVPDLAPMLWH 54

Query: 84  SFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLF 143
           SFGT AALLQEIINIYP+INPATLTAHQSNRVCNALALLQCVASH ETRS+FLAAHIPLF
Sbjct: 55  SFGTTAALLQEIINIYPSINPATLTAHQSNRVCNALALLQCVASHPETRSVFLAAHIPLF 114

Query: 144 LYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELS 203
           LYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELS
Sbjct: 115 LYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELS 174

Query: 204 KTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLR 263
           KTVATFILQKILLDDSGLSYIC TYDRFSHVA+ILGKMVISL K+ S+RLLKHVVRCYLR
Sbjct: 175 KTVATFILQKILLDDSGLSYICHTYDRFSHVAIILGKMVISLSKEPSARLLKHVVRCYLR 234

Query: 264 LSDNARAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLESVS 312
           LSDN RAREALRQCLPDQLRD TF+ CL +DKSTK WL  L+KNLE+VS
Sbjct: 235 LSDNPRAREALRQCLPDQLRDGTFAACLQEDKSTKPWLTLLLKNLETVS 283

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157114475|ref|XP_001652289.1| hypothetical protein AaeL_AAEL006867 [Aedes aegypti] gi|108877279|gb|EAT41504.1| AAEL006867-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|242009872|ref|XP_002425706.1| Cell differentiation protein rcd1, putative [Pediculus humanus corporis] gi|212509607|gb|EEB12968.1| Cell differentiation protein rcd1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|322793381|gb|EFZ16974.1| hypothetical protein SINV_08170 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332025376|gb|EGI65543.1| Cell differentiation protein RCD1-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328793536|ref|XP_623701.2| PREDICTED: cell differentiation protein RCD1 homolog [Apis mellifera] gi|380014428|ref|XP_003691234.1| PREDICTED: cell differentiation protein RCD1 homolog [Apis florea] Back     alignment and taxonomy information
>gi|307169683|gb|EFN62265.1| Cell differentiation protein RCD1-like protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|91082299|ref|XP_974015.1| PREDICTED: similar to cell differentiation protein rcd1 [Tribolium castaneum] gi|270007201|gb|EFA03649.1| hypothetical protein TcasGA2_TC013743 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307209270|gb|EFN86361.1| Cell differentiation protein RCD1-like protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340723059|ref|XP_003399915.1| PREDICTED: cell differentiation protein RCD1 homolog [Bombus terrestris] gi|350418798|ref|XP_003491970.1| PREDICTED: cell differentiation protein RCD1 homolog [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
UNIPROTKB|F2Z4M8299 RQCD1 "Uncharacterized protein 0.834 0.909 0.875 1.9e-124
UNIPROTKB|A7MB47299 RQCD1 "Cell differentiation pr 0.834 0.909 0.875 1.9e-124
UNIPROTKB|F2Z5T0299 RQCD1 "Uncharacterized protein 0.834 0.909 0.875 1.9e-124
UNIPROTKB|Q4R347299 RQCD1 "Cell differentiation pr 0.834 0.909 0.875 1.9e-124
MGI|MGI:1928902299 Rqcd1 "rcd1 (required for cell 0.834 0.909 0.875 1.9e-124
RGD|1311495299 Rqcd1 "Rcd1 required for cell 0.834 0.909 0.875 1.9e-124
UNIPROTKB|Q6IP65299 rqcd1 "Cell differentiation pr 0.834 0.909 0.871 3.9e-124
UNIPROTKB|Q6P819299 rqcd1 "Cell differentiation pr 0.834 0.909 0.871 3.9e-124
UNIPROTKB|Q92600299 RQCD1 "Cell differentiation pr 0.831 0.906 0.874 4.9e-124
UNIPROTKB|Q5R6Z6299 RQCD1 "Cell differentiation pr 0.831 0.906 0.874 4.9e-124
UNIPROTKB|F2Z4M8 RQCD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
 Identities = 238/272 (87%), Positives = 253/272 (93%)

Query:    38 ALLPVEREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIIN 97
             AL  V+REKIYQWI ELS PETRENALLELSKKRE VPDLAPMLWHSFGTIAALLQEI+N
Sbjct:    13 ALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVN 72

Query:    98 IYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPF 157
             IYP+INP TLTAHQSNRVCNALALLQCVASH ETRS FLAAHIPLFLYPFLHT SKTRPF
Sbjct:    73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPF 132

Query:   158 EYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD 217
             EYLRLTSLGVIGALVKTDEQEVI FLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD
Sbjct:   133 EYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD 192

Query:   218 DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQC 277
             D+GL+YICQTY+RFSHVAMILGKMV+ L K+ S+RLLKHVVRCYLRLSDN RAREALRQC
Sbjct:   193 DTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQC 252

Query:   278 LPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLE 309
             LPDQL+D+TF+  L DD +TK WLAQL+KNL+
Sbjct:   253 LPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQ 284
GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA
GO:0019221 "cytokine-mediated signaling pathway" evidence=IEA
GO:2000327 "positive regulation of ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA
UNIPROTKB|A7MB47 RQCD1 "Cell differentiation protein RCD1 homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5T0 RQCD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q4R347 RQCD1 "Cell differentiation protein RCD1 homolog" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
MGI|MGI:1928902 Rqcd1 "rcd1 (required for cell differentiation) homolog 1 (S. pombe)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311495 Rqcd1 "Rcd1 required for cell differentiation1 homolog (S. pombe)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6IP65 rqcd1 "Cell differentiation protein RCD1 homolog" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q6P819 rqcd1 "Cell differentiation protein RCD1 homolog" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q92600 RQCD1 "Cell differentiation protein RCD1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6Z6 RQCD1 "Cell differentiation protein RCD1 homolog" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9JKY0RCD1_MOUSENo assigned EC number0.84080.88030.9598yesN/A
Q4R347RCD1_MACFANo assigned EC number0.84080.88030.9598N/AN/A
Q92600RCD1_HUMANNo assigned EC number0.82490.88650.9665yesN/A
Q6P819RCD1_XENTRNo assigned EC number0.83730.88030.9598yesN/A
Q92368RCD1_SCHPONo assigned EC number0.68040.81590.9399yesN/A
Q6NWL4RCD1_DANRENo assigned EC number0.86390.83430.9127yesN/A
Q5PQL2RCD1_RATNo assigned EC number0.84080.88030.9598yesN/A
Q6IP65RCD1_XENLANo assigned EC number0.83730.88030.9598N/AN/A
Q5R6Z6RCD1_PONABNo assigned EC number0.82490.88650.9665yesN/A
A7MB47RCD1_BOVINNo assigned EC number0.84080.88030.9598yesN/A
P53829CAF40_YEASTNo assigned EC number0.58390.87420.7640yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
pfam04078262 pfam04078, Rcd1, Cell differentiation family, Rcd1 1e-178
COG5209315 COG5209, RCD1, Uncharacterized protein involved in 1e-120
>gnl|CDD|190856 pfam04078, Rcd1, Cell differentiation family, Rcd1-like Back     alignment and domain information 
 Score =  492 bits (1269), Expect = e-178
 Identities = 200/262 (76%), Positives = 225/262 (85%)

Query: 49  QWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLT 108
           Q I +L+ PETRENALLELSKKRE  PDLAP+LWHSFGTIAALLQEI++IYP ++P  LT
Sbjct: 1   QLICDLTNPETRENALLELSKKRESFPDLAPLLWHSFGTIAALLQEIVSIYPLLSPPNLT 60

Query: 109 AHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVI 168
           A QSNRVCNALALLQCVASH ETR LFL AHIPL+LYPFL+TTSK+RPFEYLRLTSLGVI
Sbjct: 61  AQQSNRVCNALALLQCVASHPETRRLFLRAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 120

Query: 169 GALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTY 228
           GALVK+D+ EVI FLL+TEIIPLCLRIME GSELSKTVATFILQKILLDD GL+YICQT 
Sbjct: 121 GALVKSDDPEVINFLLSTEIIPLCLRIMEFGSELSKTVATFILQKILLDDVGLNYICQTA 180

Query: 229 DRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFS 288
           +RF  VA +L KMV  L +  S RLLKHV+RCYLRLSDN RAREALR+CLP++LRD TFS
Sbjct: 181 ERFYAVATVLNKMVEQLTRQPSPRLLKHVIRCYLRLSDNPRAREALRKCLPEELRDGTFS 240

Query: 289 VCLNDDKSTKNWLAQLIKNLES 310
             L +D +TK WL QL++NL  
Sbjct: 241 QLLKEDPATKRWLLQLLQNLGD 262

Two of the members in this family have been characterized as being involved in regulation of Ste11 regulated sex genes. Mammalian Rcd1 is a novel transcriptional cofactor that mediates retinoic acid-induced cell differentiation. Length = 262
>gnl|CDD|227534 COG5209, RCD1, Uncharacterized protein involved in cell differentiation/sexual development [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
PF04078262 Rcd1: Cell differentiation family, Rcd1-like ; Int 100.0
KOG3036|consensus293 100.0
COG5209315 RCD1 Uncharacterized protein involved in cell diff 100.0
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 95.49
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 95.09
PF10508 503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 91.83
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 89.45
KOG2160|consensus342 89.36
PF05804 708 KAP: Kinesin-associated protein (KAP) 83.61
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 82.13
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 81.48
>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms [] Back     alignment and domain information 
Probab=100.00  E-value=6.2e-125  Score=880.58  Aligned_cols=262  Identities=80%  Similarity=1.192  Sum_probs=244.2

Q ss_pred             HHHHHhCCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhc
Q psy8417          49 QWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASH  128 (326)
Q Consensus        49 q~I~~L~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAsh  128 (326)
                      |||.||++|++||+||+||||+||++|||||+||||||||++|||||+|+||+++||+||+++|||||||||||||||||
T Consensus         1 q~i~~L~~~~~Re~Al~eLsk~r~~~~~La~~LW~s~G~i~~LLqEIisiYp~l~~~~Lt~~~snRVcnaLaLlQ~vAsh   80 (262)
T PF04078_consen    1 QLILDLCNPETRENALLELSKKRESFPDLAPLLWHSFGTIAALLQEIISIYPALSPPNLTARQSNRVCNALALLQCVASH   80 (262)
T ss_dssp             HHHHHTSSHHHHHHHHHHHHHTCCC-TTHHHHHHTSTTHHHHHHHHHHGGGGGTTTT---HHHHHHHHHHHHHHHHHHH-
T ss_pred             ChhHHhcCcchHHHHHHHHHHhhhcccchhHHHHcCCChHHHHHHHHHHHcccCCCcccCHHHHHHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHH
Q psy8417         129 QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVAT  208 (326)
Q Consensus       129 petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAt  208 (326)
                      ||||++||+||||+||||||||++|+|||||||||||||||||||+||+|||+||++|||||+|||+||+|||+||||||
T Consensus        81 petr~~Fl~a~iplyLyPfL~tt~k~r~~E~LRLtsLGVIgaLvK~d~~evi~fLl~tEiiplcLr~me~GselSKtvAt  160 (262)
T PF04078_consen   81 PETRMPFLKAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKTDDPEVISFLLQTEIIPLCLRIMEFGSELSKTVAT  160 (262)
T ss_dssp             TTTHHHHHHTTGGGGGHHHHH----SHHHHHHHHHHHHHHHHHHTT--HHHHHHHHCTTHHHHHHHHHHHS-HHHHHHHH
T ss_pred             hHHHHHHHHcCchhhehhhhhccccccccchhhHhHHHHHHHHHcCCcHHHHHHHHhhchHHHHHHHHHhccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhhCCcccccchhh
Q psy8417         209 FILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFS  288 (326)
Q Consensus       209 fIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~LP~~Lrd~tf~  288 (326)
                      ||+||||+||+||+|+|+|+|||+||++||++||.+|+++||+||||||||||+|||||||||+||++|||++|||++|+
T Consensus       161 fIlqKIL~dd~GL~yiC~t~eRf~av~~vL~~mV~~l~~~pS~RLLKhIIrCYlRLsdnprar~aL~~~LP~~Lrd~~f~  240 (262)
T PF04078_consen  161 FILQKILLDDVGLNYICQTAERFFAVAMVLNKMVEQLVKQPSPRLLKHIIRCYLRLSDNPRAREALRQCLPDQLRDGTFS  240 (262)
T ss_dssp             HHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTTSTTHHHHHHHHS-GGGTSSTTT
T ss_pred             HHHHHHHcchhHHHHHhcCHHHHHHHHHHHHHHHHHHccCCChhHHHHHHHHHHHHccCHHHHHHHHHhCcHHHhcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCHHHHHHHHHHHHHhcc
Q psy8417         289 VCLNDDKSTKNWLAQLIKNLES  310 (326)
Q Consensus       289 ~~l~~D~~~k~wl~qLl~nl~~  310 (326)
                      +++++|+++|+|++||+.|+++
T Consensus       241 ~~l~~D~~~k~~l~qLl~nl~~  262 (262)
T PF04078_consen  241 NILKDDPSTKRWLQQLLSNLND  262 (262)
T ss_dssp             TGGCS-HHHHHHHHHHHHHTT-
T ss_pred             HHHhcCHHHHHHHHHHHHHhcC
Confidence            9999999999999999999973

Rcd1 was initially identified as an essential factor in nitrogen starvation-invoked differentiation in fission yeast. This results largely from a defect in nitrogen starvation-invoked induction of ste11+, a key transcriptional factor gene required for the onset of sexual development. It is one of the most conserved proteins in eukaryotes, and its mammalian homologue is expressed in a variety of differentiating tissues [, ]. The mammalian Rcd1 is a novel transcriptional cofactor and is critical for retinoic acid-induced differentiation of F9 mouse teratocarcinoma cells, at least in part, via forming complexes with retinoic acid receptor and activation transcription factor-2 (ATF-2) []. Two of the members in this family have been characterised as being involved in regulation of Ste11 regulated sex genes [, ].; PDB: 2FV2_B.
>KOG3036|consensus Back     alignment and domain information
>COG5209 RCD1 Uncharacterized protein involved in cell differentiation/sexual development [General function prediction only] Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>KOG2160|consensus Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
2fv2_A268 Crystal Structure Analysis Of Human Rcd-1 Conserved 1e-139
>pdb|2FV2|A Chain A, Crystal Structure Analysis Of Human Rcd-1 Conserved Region Length = 268 Back     alignment and structure 
Iteration: 1

 Score =  490 bits (1262), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/267 (88%), Positives = 250/267 (93%)
Query: 43  EREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTI 102
           +REKIYQWI ELS PETRENALLELSKKRE VPDLAPMLWHSFGTIAALLQEI+NIYP+I
Sbjct: 1   DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSI 60
Query: 103 NPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRL 162
           NP TLTAHQSNRVCNALALLQCVASH ETRS FLAAHIPLFLYPFLHT SKTRPFEYLRL
Sbjct: 61  NPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRL 120
Query: 163 TSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLS 222
           TSLGVIGALVKTDEQEVI FLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDD+GL+
Sbjct: 121 TSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLA 180
Query: 223 YICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQL 282
           YICQTY+RFSHVAMILGKMV+ L K+ S+RLLKHVVRCYLRLSDN RAREALRQCLPDQL
Sbjct: 181 YICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL 240
Query: 283 RDSTFSVCLNDDKSTKNWLAQLIKNLE 309
           +D+TF+  L DD +TK WLAQL+KNL+
Sbjct: 241 KDTTFAQVLKDDTTTKRWLAQLVKNLQ 267

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
2fv2_A268 RCD1 required for cell differentiation1 homolog; a 1e-144
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens} Length = 268 Back     alignment and structure
 Score =  405 bits (1042), Expect = e-144
 Identities = 235/267 (88%), Positives = 250/267 (93%)

Query: 43  EREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTI 102
           +REKIYQWI ELS PETRENALLELSKKRE VPDLAPMLWHSFGTIAALLQEI+NIYP+I
Sbjct: 1   DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSI 60

Query: 103 NPATLTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRL 162
           NP TLTAHQSNRVCNALALLQCVASH ETRS FLAAHIPLFLYPFLHT SKTRPFEYLRL
Sbjct: 61  NPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRL 120

Query: 163 TSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLS 222
           TSLGVIGALVKTDEQEVI FLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDD+GL+
Sbjct: 121 TSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLA 180

Query: 223 YICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQL 282
           YICQTY+RFSHVAMILGKMV+ L K+ S+RLLKHVVRCYLRLSDN RAREALRQCLPDQL
Sbjct: 181 YICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL 240

Query: 283 RDSTFSVCLNDDKSTKNWLAQLIKNLE 309
           +D+TF+  L DD +TK WLAQL+KNL+
Sbjct: 241 KDTTFAQVLKDDTTTKRWLAQLVKNLQ 267
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
2fv2_A268 RCD1 required for cell differentiation1 homolog; a 100.0
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.76
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.53
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 97.5
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 97.36
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 97.29
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.16
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.13
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 96.72
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 96.17
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 96.1
2jdq_A 450 Importin alpha-1 subunit; transport, PB2 subunit, 96.08
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 95.57
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 95.43
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 95.32
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 94.78
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 93.21
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 93.16
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 92.86
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 92.82
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 92.55
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 92.21
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 91.27
3nmz_A458 APC variant protein; protein-protein complex, arma 91.22
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 89.28
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 88.41
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 88.23
1ibr_B 462 P95, importin beta-1 subunit, nuclear factor; smal 87.02
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 87.02
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 85.64
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 85.42
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 82.94
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 81.77
1w63_A 618 Adapter-related protein complex 1 gamma 1 subunit; 81.34
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=5.2e-128  Score=901.48  Aligned_cols=267  Identities=88%  Similarity=1.329  Sum_probs=264.7

Q ss_pred             hHHHHHHHHHHhCCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHH
Q psy8417          43 EREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALL  122 (326)
Q Consensus        43 d~~~v~q~I~~L~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLL  122 (326)
                      |+|+++|||.||++|++||+||+|||||||++|||||+||||||||++|||||+|+||+++||+||+++|||||||||||
T Consensus         1 ~~~~i~qli~~L~~p~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLl   80 (268)
T 2fv2_A            1 DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALL   80 (268)
T ss_dssp             -CHHHHHHHHHTSSTTTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHhcCchhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccch
Q psy8417         123 QCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSEL  202 (326)
Q Consensus       123 QcvAshpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsEl  202 (326)
                      ||||||||||++||+||||+||||||||++|+|||||||||||||||||||+||+|||+|||+|||||+|||+||+|||+
T Consensus        81 QcvAshpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~Gsel  160 (268)
T 2fv2_A           81 QCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSEL  160 (268)
T ss_dssp             HHHHHCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSCHH
T ss_pred             HHHHcCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhhCCccc
Q psy8417         203 SKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQL  282 (326)
Q Consensus       203 SKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~LP~~L  282 (326)
                      ||||||||+||||+||+||+|+|+|+|||+||++||++||.++.++||+||||||||||+|||||||||++|++|||++|
T Consensus       161 SKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~~~LP~~L  240 (268)
T 2fv2_A          161 SKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL  240 (268)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHHHHSCGGG
T ss_pred             HHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHHHhCcHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhcCCHHHHHHHHHHHHHhc
Q psy8417         283 RDSTFSVCLNDDKSTKNWLAQLIKNLE  309 (326)
Q Consensus       283 rd~tf~~~l~~D~~~k~wl~qLl~nl~  309 (326)
                      ||++|++++++|+++|+|++||+.|++
T Consensus       241 rd~tf~~~l~~D~~~k~~l~qLl~n~~  267 (268)
T 2fv2_A          241 KDTTFAQVLKDDTTTKRWLAQLVKNLQ  267 (268)
T ss_dssp             TSSTTHHHHTSCHHHHHHHHHHHHHSC
T ss_pred             hChHHHHHHhcCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999985
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 96.65
d1wa5b_ 503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 96.26
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 95.69
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 95.35
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 93.73
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 92.96
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 91.9
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 91.26
d1b3ua_ 588 Constant regulatory domain of protein phosphatase 88.29
d1wa5c_ 959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 86.01
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 85.53
d2bpta1 861 Importin beta {Baker's yeast (Saccharomyces cerevi 82.27
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.02  Score=48.05  Aligned_cols=189  Identities=19%  Similarity=0.222  Sum_probs=123.1

Q ss_pred             chHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhh-chhhHHHHH
Q psy8417          58 ETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVAS-HQETRSLFL  136 (326)
Q Consensus        58 ~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAs-hpetR~~FL  136 (326)
                      +.|+.|+..|+.--+.. |.|- -|+..|-+..++.      ..++.++    ..-| ..|...|-.++. +|..+..++
T Consensus        32 ~~~~~Al~~L~~L~~~~-d~a~-~l~~~gg~~~ll~------~ll~s~~----~~vr-~~A~~~L~~l~~~~~~~~~~~~   98 (264)
T d1xqra1          32 QEREGALELLADLCENM-DNAA-DFCQLSGMHLLVG------RYLEAGA----AGLR-WRAAQLIGTCSQNVAAIQEQVL   98 (264)
T ss_dssp             HHHHHHHHHHHHHHTSH-HHHH-HHHHTTHHHHHHH------TTTTCSS----HHHH-HHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCH-HHHH-HHHHcCCHHHHHH------HHhCCCC----HHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            45666665555544322 2233 3456666655533      3343321    2223 244455556665 688999999


Q ss_pred             hhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhc
Q psy8417         137 AAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILL  216 (326)
Q Consensus       137 ~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~  216 (326)
                      .++..-.|..+|+..    +...+|...++.++.+++.+++- ..-+.....+|..++.+..+++-.+..|.+.+..++.
T Consensus        99 ~~~~i~~Lv~lL~~~----~~~~v~~~a~~aL~~l~~~~~~~-~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~  173 (264)
T d1xqra1          99 GLGALRKLLRLLDRD----ACDTVRVKALFAISCLVREQEAG-LLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLV  173 (264)
T ss_dssp             HTTHHHHHHHHHHHC----SCHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred             HcCchHHHHHHhhcC----CCHHHHHHHHHHHHHHhccchhh-HHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHh
Confidence            998777777888643    23457889999999999866643 3455577789999999999999999999999998876


Q ss_pred             ccccchhhhcchhhhHHHH--HHHHHHHHHHhhcCCchhHHHHHHHHHHhhc-CHHHHHHH
Q psy8417         217 DDSGLSYICQTYDRFSHVA--MILGKMVISLEKDQSSRLLKHVVRCYLRLSD-NARAREAL  274 (326)
Q Consensus       217 dd~GL~YiC~T~eRF~aV~--~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd-n~rar~aL  274 (326)
                      .+...         ...+.  .++..++. +.+.+++.+-+++.++...|++ +|..+...
T Consensus       174 ~~~~~---------~~~~~~~~~v~~L~~-lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~  224 (264)
T d1xqra1         174 GHPEH---------KGTLCSMGMVQQLVA-LVRTEHSPFHEHVLGALCSLVTDFPQGVREC  224 (264)
T ss_dssp             HCGGG---------HHHHHHTTHHHHHHH-HHTSCCSTHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             ccHHH---------HHHHHHhhhHHHHHH-HHcCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            54322         22222  23444444 4577899999999999999887 44444443
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure