Psyllid ID: psy8443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Protein Sequence
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Secondary Structure (PSIPRED)
cccEEEEEEEEccccccccccccEEEEccccEEEEEcccEEEEEcccEEEccccEEcccccEEEcccEEEEcccccccccccccEEEEEEcccccEEEEEEEEEEEcccccccccccccEEEEEEcccccccEEEEEEcccccccEEEcccEEEEEEEEccccccccEEEEEEEEccccccccccccccccccccEEEEEEcccEEEccccccccccccccEEEcccEEEEcccccccccccccEEEEEEcccccEEEEEEEEEEEcccccccccEEEEEEccccccccEEccccccccccEEEEccEEEEEEEEccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEHHHHHcHHcccccccccccEEEEcccEEEEEEcccEEEcccccccccccccccccccEEEccccEEEcccccccccccccEEEEEEEccccEEEEEEEEEEEccccccccccccEEEEEEccccccccccEEEccccccccEEEcccEEEEEEEEccccccccEEEEEEEcccccccccccccccEEEcccEEEEEEcccEEEcccccccEEcccccEEcccccEEEcccccccccccccEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccEEEcccEEEEEEEEccccccccEEEEEEc
Coil and Loop (DISEMBL)
miklrirwfkfdecaledhgcehtcknilggyecsckigyelhsdgkicvgsvkardacggilkhsngtltspsfpdlyiknktciweivappqyrislnfthfdiegnnlfqssceydnltvFSKIGdsfksqgvfcgsklppvilsegnalriefhsdnsvqksgfsaffftdkdecmtnnggcqhecRNTIgsyicschngytllenghdckeggckyeitapngviktpnhpdyypskreciwhftttpghriklvfqefelephqtcaydhvvmydgdspdsltlgrfcgiklpypiitgsnQLYMMFksdasvqrkgfiathtt
Flexible Loop (DISEMBL)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILkhsngtltspsfpDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEItapngviktpnHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Low Complexity Region (SEG)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Disordered region (IsUnstruct)
**KLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDA*************
Disordered Region (DISOPRED)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Disordered Region (DISEMBL)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Disordered Region (DISPRO)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIKLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	330	2.2.26 [Sep-21-2011]
P25723	1067	Dorsal-ventral patterning	no	N/A	0.948	0.293	0.531	1e-103
Q9Y6L7	1015	Tolloid-like protein 2 OS	yes	N/A	0.936	0.304	0.549	1e-102
Q8JI28	1007	Tolloid-like protein 1 OS	N/A	N/A	0.936	0.306	0.540	1e-101
Q9WVM6	1012	Tolloid-like protein 2 OS	yes	N/A	0.942	0.307	0.531	1e-100
O43897	1013	Tolloid-like protein 1 OS	no	N/A	0.936	0.305	0.528	1e-100
Q9DER7	1008	Tolloid-like protein 1 OS	no	N/A	0.930	0.304	0.526	2e-99
O57460	1022	Dorsal-ventral patterning	yes	N/A	0.936	0.302	0.531	2e-98
O57382	1019	Tolloid-like protein 2 OS	N/A	N/A	0.939	0.304	0.517	4e-97
Q62381	1013	Tolloid-like protein 1 OS	no	N/A	0.936	0.305	0.518	4e-97
P98063	991	Bone morphogenetic protei	no	N/A	0.954	0.317	0.501	7e-93

>sp|P25723|TLD_DROME Dorsal-ventral patterning protein tolloid OS=Drosophila melanogaster GN=tld PE=2 SV=2

 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/322 (53%), Positives = 226/322 (70%), Gaps = 9/322 (2%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILK--HSNGT 69
           DEC   DHGC+H C N LG Y+C C+ GYEL ++GK C       DACGG++    SNG+
Sbjct: 593 DECKFTDHGCQHLCINTLGSYQCGCRAGYELQANGKTC------EDACGGVVDATKSNGS 646

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
           L SPS+PD+Y  +K C+WE+VAPP + + LNF+HFD+EG     + C YD L ++SK+ D
Sbjct: 647 LYSPSYPDVYPNSKQCVWEVVAPPNHAVFLNFSHFDLEGTRFHYTKCNYDYLIIYSKMRD 706

Query: 130 S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
           +  K  G++CG +LPPV+ SE + LR+EF+SD +VQ+SGF A F  D DEC  NNGGCQH
Sbjct: 707 NRLKKIGIYCGHELPPVVNSEQSILRLEFYSDRTVQRSGFVAKFVIDVDECSMNNGGCQH 766

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            CRNT GSY CSC NGYTL ENGH+C E  CK+EIT   GV+++PN+P+ YP    C WH
Sbjct: 767 RCRNTFGSYQCSCRNGYTLAENGHNCTETRCKFEITTSYGVLQSPNYPEDYPRNIYCYWH 826

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
           F T  GHRI+L F +FE+E HQ C YD+V +YDG S +S TLG +CG + PY +I  +N+
Sbjct: 827 FQTVLGHRIQLTFHDFEVESHQECIYDYVAIYDGRSENSSTLGIYCGGREPYAVIASTNE 886

Query: 309 LYMMFKSDASVQRKGFIATHTT 330
           ++M+  +DA +QRKGF AT  +
Sbjct: 887 MFMVLATDAGLQRKGFKATFVS 908

Required for normal dorsal development. TLD may interact physically with DPP-C protein.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -

>sp|Q9Y6L7|TLL2_HUMAN Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1

 Score =  372 bits (954), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/324 (54%), Positives = 224/324 (69%), Gaps = 15/324 (4%)

Query: 10  KFDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNG 68
           + DEC+  DHG CEH C N LG Y+C+C  GYEL +D K+C        ACGG +   NG
Sbjct: 576 EVDECSWPDHGGCEHRCVNTLGSYKCACDPGYELAADKKMC------EVACGGFITKLNG 629

Query: 69  TLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 128
           T+TSP +P  Y  NK C+W++VAP QYRISL F  F++EGN++    C+YD + V S + 
Sbjct: 630 TITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDV----CKYDFVEVRSGLS 685

Query: 129 DSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              K  G FCGS+ P VI S+ N +R+EF SDN+V K GF A FF+DKDEC  +NGGCQH
Sbjct: 686 PDAKLHGRFCGSETPEVITSQSNNMRVEFKSDNTVSKRGFRAHFFSDKDECAKDNGGCQH 745

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           EC NT GSY+C C NGY L ENGHDCKE GC ++I++  G + +PN PD YPS+REC W+
Sbjct: 746 ECVNTFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPNWPDKYPSRRECTWN 805

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLT--LGRFCGIKLPYPIITGS 306
            ++T GHR+KL F EFE+E HQ CAYDH+ MYDG  PDSL   LGRFCG K P P +   
Sbjct: 806 ISSTAGHRVKLTFNEFEIEQHQECAYDHLEMYDG--PDSLAPILGRFCGSKKPDPTVASG 863

Query: 307 NQLYMMFKSDASVQRKGFIATHTT 330
           + +++ F SDASVQRKGF A H+T
Sbjct: 864 SSMFLRFYSDASVQRKGFQAVHST 887

Protease which specifically processes pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q8JI28|TLL1_XENLA Tolloid-like protein 1 OS=Xenopus laevis GN=tll1 PE=1 SV=1

 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/320 (54%), Positives = 224/320 (70%), Gaps = 11/320 (3%)

Query: 12  DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
           DECA  D+G CE  C N LG Y+CSC  GYEL  D K C        ACGG+L   NGT+
Sbjct: 571 DECARPDNGGCEQRCVNTLGSYKCSCDPGYELAPDKKSCEA------ACGGLLTKLNGTI 624

Query: 71  TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           T+P++P  Y  NK C+W++VAP QYRIS+ F +F++EGN +    C+YD + V S +   
Sbjct: 625 TTPAWPKEYPPNKNCVWQVVAPSQYRISMKFDYFELEGNEV----CKYDYVEVRSGLSSD 680

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
            K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct: 681 SKLHGKFCGTEVPEVITSQFNNMRIEFKSDNTVSKKGFRAHFFSDKDECSKDNGGCQHEC 740

Query: 191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
            NTIGSY+C C NG+ L +N HDCKE  C++ I + NGVI +PN PD YPS++EC W  +
Sbjct: 741 INTIGSYVCQCRNGFVLHDNKHDCKEAECEHRIHSSNGVITSPNWPDKYPSRKECTWEIS 800

Query: 251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
            TPGHR+KL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct: 801 ATPGHRVKLSFSEFEIEQHQECAYDHLEVFDGETEKSSILGRLCGSKVPEPLVATGNEMF 860

Query: 311 MMFKSDASVQRKGFIATHTT 330
           + F SDASVQRKGF ATH+T
Sbjct: 861 IRFVSDASVQRKGFQATHST 880

Protease which processes procollagen C-propeptides, such as chordin. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q9WVM6|TLL2_MOUSE Tolloid-like protein 2 OS=Mus musculus GN=Tll2 PE=1 SV=1

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/322 (53%), Positives = 218/322 (67%), Gaps = 11/322 (3%)

Query: 10  KFDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNG 68
           + DEC+  DHG CE  C N LG Y C+C  GYEL +D K C        ACGG +   NG
Sbjct: 573 EVDECSWPDHGGCEQRCVNTLGSYTCACDPGYELAADKKTC------EVACGGFITKLNG 626

Query: 69  TLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 128
           T+TSP +P  Y  NK C+W++VAP QYRISL F  F++EGN++    C+YD + V S + 
Sbjct: 627 TITSPGWPKEYPTNKNCVWQVVAPVQYRISLQFEAFELEGNDV----CKYDFVEVRSGLS 682

Query: 129 DSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              K  G FCGS+ P VI S+ N +R+EF SDN+V K GF A FF+DKDEC  +NGGCQ 
Sbjct: 683 PDAKLHGKFCGSETPEVITSQSNNMRVEFKSDNTVSKRGFRAHFFSDKDECAKDNGGCQQ 742

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           EC NT GSY+C C NGY L ENGHDCKE GC Y+I++  G + +PN PD YPS++EC W+
Sbjct: 743 ECVNTFGSYLCRCRNGYRLHENGHDCKEAGCAYKISSAEGTLMSPNWPDKYPSRKECTWN 802

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
            ++T GHR+K+ F EFE+E HQ CAYDH+ +YDG    +  LGRFCG K P P++   + 
Sbjct: 803 ISSTAGHRVKITFSEFEIEQHQECAYDHLELYDGTDSLAPILGRFCGSKKPDPVVATGSS 862

Query: 309 LYMMFKSDASVQRKGFIATHTT 330
           L++ F SDASVQRKGF A H+T
Sbjct: 863 LFLRFYSDASVQRKGFQAVHST 884

Protease which specifically processes pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O43897|TLL1_HUMAN Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 224/320 (70%), Gaps = 11/320 (3%)

Query: 12  DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
           DECA  D G CE  C N LG Y+C+C+ GYEL  D + C        ACGG+L   NGT+
Sbjct: 576 DECAKPDRGGCEQRCLNTLGSYQCACEPGYELGPDRRSCEA------ACGGLLTKLNGTI 629

Query: 71  TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + ++S +   
Sbjct: 630 TTPGWPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNEV----CKYDYVEIWSGLSSE 685

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
            K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct: 686 SKLHGKFCGAEVPEVITSQFNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 745

Query: 191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
            NT+GSY+C C NG+ L +N HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  +
Sbjct: 746 VNTMGSYMCQCRNGFVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEIS 805

Query: 251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
            TPGHRIKL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct: 806 ATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPDPLVATGNKMF 865

Query: 311 MMFKSDASVQRKGFIATHTT 330
           + F SDASVQRKGF ATH+T
Sbjct: 866 VRFVSDASVQRKGFQATHST 885

Protease which processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q9DER7|TLL1_CHICK Tolloid-like protein 1 OS=Gallus gallus GN=TLL1 PE=2 SV=1

 Score =  362 bits (929), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 167/317 (52%), Positives = 218/317 (68%), Gaps = 10/317 (3%)

Query: 14  CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSP 73
           C  ++ GCE  C N LG Y+C+C  GYEL  D K C        ACGG+L   NGT+ +P
Sbjct: 574 CQPDNGGCEQRCVNTLGSYQCACDPGYELGPDKKSCEA------ACGGLLTKLNGTIPTP 627

Query: 74  SFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKS 133
            +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + + S +    K 
Sbjct: 628 GWPKEYPPNKNCVWQVVAPTQYRISMKFEFFELEGNEV----CKYDYVEIRSGLSSDSKL 683

Query: 134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNT 193
            G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC NT
Sbjct: 684 HGKFCGTEVPEVITSQYNNMRIEFRSDNTVSKKGFKAHFFSDKDECSKDNGGCQHECINT 743

Query: 194 IGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTP 253
           +GSY+C C NG+ L EN HDCKE  C+ +I +PNG+I +PN PD YPS++EC W  + TP
Sbjct: 744 VGSYVCQCRNGFVLHENKHDCKEAECEQKIHSPNGIIMSPNWPDKYPSRKECTWEISATP 803

Query: 254 GHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMF 313
           G R+KL F EFE+E HQ CAYDH+ ++DG+S  S  LGR CG K+P P+I   N++++ F
Sbjct: 804 GQRVKLTFNEFEIEQHQECAYDHLEVFDGESEKSPILGRLCGSKIPEPLIATGNKMFLRF 863

Query: 314 KSDASVQRKGFIATHTT 330
            SDASVQRKGF ATH+T
Sbjct: 864 ISDASVQRKGFQATHST 880

Protease which processes procollagen C-propeptides, such as chordin, probiglycan and prolysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O57460|TLL1_DANRE Dorsal-ventral patterning tolloid-like protein 1 OS=Danio rerio GN=tll1 PE=2 SV=1

 Score =  359 bits (921), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 219/320 (68%), Gaps = 11/320 (3%)

Query: 12  DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
           DEC   D+G CE  C N LG ++C+C  GYEL  D K C        ACGG+L   NGT+
Sbjct: 585 DECLKPDNGGCEQRCVNTLGSFKCACDPGYELAPDKKSCEA------ACGGLLTKLNGTI 638

Query: 71  TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + V S +   
Sbjct: 639 TTPGWPKEYPPNKNCVWQVVAPTQYRISMQFEAFELEGNEV----CKYDYVEVRSGLSSD 694

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
            K  G +CG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct: 695 SKLHGKYCGTEVPEVITSQYNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 754

Query: 191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
            NTIGSY+C C NG+ L EN HDCKE  C+++I +  G I +PN PD YPS++EC W  T
Sbjct: 755 INTIGSYVCQCRNGFILHENKHDCKEAECEHKIHSTTGTISSPNWPDKYPSRKECTWDIT 814

Query: 251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
            TPGHR+K+ F EFE+E HQ CAYDH+  +DGDS  +  L R CG K+P P+I+  N++Y
Sbjct: 815 ATPGHRVKISFNEFEIEQHQECAYDHLEAFDGDSDKTPILSRLCGNKIPEPLISTGNKMY 874

Query: 311 MMFKSDASVQRKGFIATHTT 330
           + F SDASVQRKGF ATH+T
Sbjct: 875 LRFISDASVQRKGFQATHST 894

Required for patterning ventral tissues of the tail. May increase bone morphogenetic protein (BMP) activity at the end of gastrulation by proteolytic cleavage of chordin and release of BMP from inactive complexes.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O57382|TLL2_XENLA Tolloid-like protein 2 OS=Xenopus laevis GN=tll2 PE=2 SV=1

 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 217/321 (67%), Gaps = 11/321 (3%)

Query: 10  KFDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNG 68
           + DEC+  D+G C   C N LG Y+C C+ G+EL +D K C        ACGG +   NG
Sbjct: 579 EMDECSRPDNGGCSQRCVNTLGSYKCVCEPGFELTADKKSCEA------ACGGFITQLNG 632

Query: 69  TLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 128
           T+TSP +P  Y  NK C+W++VAP QYRISL F  F++EGN++    C+YD L + S + 
Sbjct: 633 TITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDV----CKYDYLEIRSGLS 688

Query: 129 DSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              K  G FCG + P VI S+GN +RIEF SDN+V K GF A FF+DKDEC  +NGGCQH
Sbjct: 689 SESKLHGKFCGPEKPEVITSQGNTVRIEFKSDNTVSKKGFKANFFSDKDECSKDNGGCQH 748

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           +C NT GSYIC C NG+ L ENGHDCKE GC+ ++    G I +PN P+ YPS++EC W 
Sbjct: 749 DCVNTFGSYICQCKNGFILHENGHDCKEAGCEQKLLNAEGTISSPNWPEKYPSRKECTWD 808

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
            + T GHR+KLVF +FE+E HQ CAYDH+ +YDG +  +  LGRFCG K P P++  +N 
Sbjct: 809 ISVTAGHRVKLVFTDFEIEQHQECAYDHLELYDGPNGKAAILGRFCGSKEPSPVVASTNN 868

Query: 309 LYMMFKSDASVQRKGFIATHT 329
           +++ F SDASVQRKGF A ++
Sbjct: 869 MFLRFYSDASVQRKGFQAKYS 889

Protease which specifically processes prolysyl oxidase and maybe also chordin. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis. In embryos, inhibits the development of dorsoanterior structures and ventralizes activin-induced dorsal mesoderm in animal caps.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q62381|TLL1_MOUSE Tolloid-like protein 1 OS=Mus musculus GN=Tll1 PE=1 SV=1

 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 166/320 (51%), Positives = 218/320 (68%), Gaps = 11/320 (3%)

Query: 12  DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
           DECA  D G CE  C N LG Y+C+C+ GYEL  D + C        ACGG+L   NGT+
Sbjct: 576 DECAKPDRGGCEQRCLNTLGSYQCACEPGYELGPDRRSCEA------ACGGLLTKLNGTI 629

Query: 71  TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           T+P +P  Y  NK C+W+++AP QYRIS+ F  F++EGN +    C+YD + ++S     
Sbjct: 630 TTPGWPKEYPPNKNCVWQVIAPSQYRISVKFEFFELEGNEV----CKYDYVEIWSGPSSE 685

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
            K  G FCG+ +P V+ S  N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct: 686 SKLHGKFCGADIPEVMTSHFNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 745

Query: 191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
            NT+GSY C C NG+ L EN HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  +
Sbjct: 746 VNTMGSYTCQCRNGFVLHENKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWVIS 805

Query: 251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
             PGHRI L F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct: 806 AIPGHRITLAFNEFEVEQHQECAYDHLEIFDGETEKSPILGRLCGSKIPDPLMATGNEMF 865

Query: 311 MMFKSDASVQRKGFIATHTT 330
           + F SDASVQRKGF ATH+T
Sbjct: 866 IRFISDASVQRKGFQATHST 885

Protease which processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Required for the embryonic development, especially heart development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|P98063|BMP1_MOUSE Bone morphogenetic protein 1 OS=Mus musculus GN=Bmp1 PE=1 SV=2

 Score =  340 bits (873), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 164/327 (50%), Positives = 217/327 (66%), Gaps = 12/327 (3%)

Query: 6   IRWFK-FDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGIL 63
           + +FK  DEC+  + G CE  C N LG Y+CSC  GYEL  D + C        ACGG L
Sbjct: 547 VNFFKEVDECSRPNRGGCEQRCLNTLGSYKCSCDPGYELAPDKRRCEA------ACGGFL 600

Query: 64  KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTV 123
              NG++TSP +P  Y  NK CIW++VAP QYRISL F  F+ EGN++    C+YD + V
Sbjct: 601 TKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDV----CKYDFVEV 656

Query: 124 FSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNN 183
            S +    K  G FCGS+ P VI S+ N +R+EF SDN+V K GF A FF+DKDEC  +N
Sbjct: 657 RSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEFKSDNTVSKKGFKAHFFSDKDECSKDN 716

Query: 184 GGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKR 243
           GGCQ +C NT GSY C C +G+ L +N HDCKE GC++++T+ +G I +PN PD YPSK+
Sbjct: 717 GGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCEHKVTSTSGTITSPNWPDKYPSKK 776

Query: 244 ECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPII 303
           EC W  ++TPGHR+KL F E ++E    CAYDH+ ++DG    +  LGRFCG K P P++
Sbjct: 777 ECTWAISSTPGHRVKLTFVEMDIESQPECAYDHLEVFDGRDAKAPVLGRFCGSKKPEPVL 836

Query: 304 TGSNQLYMMFKSDASVQRKGFIATHTT 330
              N++++ F SD SVQRKGF A+H+T
Sbjct: 837 ATGNRMFLRFYSDNSVQRKGFQASHST 863

Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
332021857	1224	Tolloid-like protein 2 [Acromyrmex echin	0.954	0.257	0.714	1e-142
307169336	1051	Tolloid-like protein 2 [Camponotus flori	0.954	0.299	0.714	1e-141
307193271	1238	Tolloid-like protein 2 [Harpegnathos sal	0.954	0.254	0.689	1e-139
345495274	1135	PREDICTED: tolloid-like protein 2-like [	0.954	0.277	0.677	1e-136
340722615	1233	PREDICTED: tolloid-like protein 2-like [	0.954	0.255	0.686	1e-135
350424355	1086	PREDICTED: tolloid-like protein 2-like [	0.954	0.290	0.686	1e-135
328787501	1232	PREDICTED: tolkin [Apis mellifera]	0.954	0.255	0.674	1e-133
380022873	914	PREDICTED: LOW QUALITY PROTEIN: tolloid-	0.954	0.344	0.683	1e-133
383851625	1225	PREDICTED: tolloid-like protein 2-like [	0.954	0.257	0.667	1e-133
157135134	1404	bone morphogenetic protein [Aedes aegypt	0.954	0.224	0.650	1e-132

>gi|332021857|gb|EGI62193.1| Tolloid-like protein 2 [Acromyrmex echinatior]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 230/322 (71%), Positives = 269/322 (83%), Gaps = 7/322 (2%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            +FDEC L DHGCEH C N LGGYECSCKIG+ELHSDGK C       DACGG    SNGT
Sbjct: 771  EFDECVLTDHGCEHDCINTLGGYECSCKIGFELHSDGKHC------EDACGGFFDDSNGT 824

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
            +TSPSFP+ Y  NK C+WEI+APPQYRI+LNFTHFD+EGNN++Q  CEYD++ V SK+GD
Sbjct: 825  ITSPSFPETYPGNKNCVWEIIAPPQYRITLNFTHFDLEGNNVYQEECEYDSVEVASKLGD 884

Query: 130  S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
               +  G+FCG++LPP+I SEGN +RI F SDNSVQKSGF+A FFTD DEC  NNGGCQH
Sbjct: 885  DVLRKHGIFCGARLPPLITSEGNFMRIIFTSDNSVQKSGFAAVFFTDMDECANNNGGCQH 944

Query: 189  ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            EC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEIT P G I +PN+PDYYP +++C+WH
Sbjct: 945  ECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEITTPMGTITSPNYPDYYPGRKDCVWH 1004

Query: 249  FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
            FTT PGHRIKLVF+ FE+EPHQ CAYDH+ +YDGDSPDS+TLGRFCG K P+PI+  SNQ
Sbjct: 1005 FTTKPGHRIKLVFKVFEMEPHQECAYDHIAIYDGDSPDSITLGRFCGNKEPHPILATSNQ 1064

Query: 309  LYMMFKSDASVQRKGFIATHTT 330
            +YM+FKSDASVQRKGF+ATH+T
Sbjct: 1065 MYMVFKSDASVQRKGFLATHST 1086

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169336|gb|EFN62057.1| Tolloid-like protein 2 [Camponotus floridanus]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 230/322 (71%), Positives = 267/322 (82%), Gaps = 7/322 (2%)

Query: 10  KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
           +FDEC L DHGCEH C N LGGYECSCKIGYELHSDGK C       DACGG    SNGT
Sbjct: 599 EFDECILTDHGCEHNCTNTLGGYECSCKIGYELHSDGKHC------EDACGGFFNGSNGT 652

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
           +TSPSFP+ Y  NK C+WEIVAP QYRI+LNFTHFD+EGNN++Q  CEYD++ V SK+GD
Sbjct: 653 ITSPSFPEAYPGNKNCVWEIVAPSQYRITLNFTHFDLEGNNVYQEECEYDSVEVASKLGD 712

Query: 130 S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              +  G+FCG++LP +I SEGN +RI F SDNSVQKSGF+A FFTD DEC +NNGGCQH
Sbjct: 713 DVLRKHGIFCGARLPSLITSEGNFMRITFTSDNSVQKSGFAAIFFTDMDECASNNGGCQH 772

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           EC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN+PDYYP +++C+WH
Sbjct: 773 ECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIIAPVGTITSPNYPDYYPGRKDCVWH 832

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
           FTT PGHRIKLVF+ FE+E HQ CAYDH+V+YDGDSPDSLTLGRFCG K P+PI+   NQ
Sbjct: 833 FTTKPGHRIKLVFKVFEMESHQECAYDHIVIYDGDSPDSLTLGRFCGTKEPHPILATGNQ 892

Query: 309 LYMMFKSDASVQRKGFIATHTT 330
           +YM+FKSDASVQRKGF+ATH+T
Sbjct: 893 MYMVFKSDASVQRKGFLATHST 914

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193271|gb|EFN76162.1| Tolloid-like protein 2 [Harpegnathos saltator]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 226/328 (68%), Positives = 269/328 (82%), Gaps = 13/328 (3%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            ++DEC + DHGCEH C N LGGYECSCK+G+ELHSDGK C       DACGG    +NGT
Sbjct: 778  EYDECKMTDHGCEHDCINTLGGYECSCKVGFELHSDGKHC------EDACGGFFDDNNGT 831

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
            +TSPSFP+ Y  NK CIWEI+APPQYRI+LNFTHFD+EGNN++Q  CEYD++ V SK+GD
Sbjct: 832  ITSPSFPESYPGNKNCIWEIIAPPQYRITLNFTHFDLEGNNMYQEECEYDSVEVVSKLGD 891

Query: 130  S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              ++  G+FCG++LPP+I SEGN +RI F SDNSVQKSGF+A FFTD DEC  NNGGCQH
Sbjct: 892  DVYRKHGIFCGARLPPLITSEGNFMRITFTSDNSVQKSGFAAVFFTDMDECANNNGGCQH 951

Query: 189  ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            EC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEITAP G I +PN+PDYYP +++C+WH
Sbjct: 952  ECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEITAPMGTITSPNYPDYYPGRKDCVWH 1011

Query: 249  FTTTPGHRIKLV------FQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPI 302
            FTT PGHRIKLV         FE+EPHQ CAYDH+ +YDGDSPDS+TLGRFCG K P+PI
Sbjct: 1012 FTTKPGHRIKLVCIAILAILVFEMEPHQECAYDHIAIYDGDSPDSITLGRFCGTKEPHPI 1071

Query: 303  ITGSNQLYMMFKSDASVQRKGFIATHTT 330
            +  +NQ+YM+FKSDASVQRKGF+ATH+T
Sbjct: 1072 LATANQMYMVFKSDASVQRKGFLATHST 1099

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495274|ref|XP_003427473.1| PREDICTED: tolloid-like protein 2-like [Nasonia vitripennis]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/329 (67%), Positives = 267/329 (81%), Gaps = 14/329 (4%)

Query: 10  KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
           +FDECAL DHGCEH C N LGG+ECSCKIGYELHSDGK C       DACGG+   SNGT
Sbjct: 673 EFDECALTDHGCEHDCINTLGGFECSCKIGYELHSDGKHC------EDACGGVFNASNGT 726

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
           +TSPSFP+ Y  NK C+WEIVAPPQYRI+LNFTHFD+EGNN+++  CEYD+L V SK+GD
Sbjct: 727 ITSPSFPETYPGNKHCVWEIVAPPQYRITLNFTHFDLEGNNVYEQPCEYDSLEVSSKLGD 786

Query: 130 S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
             FK  G++CGS+ PP+I SEGN L++ F SDNS+QKSGF+A FFTD DEC  NNGGCQH
Sbjct: 787 DIFKKHGIYCGSRFPPLITSEGNTLKVVFSSDNSMQKSGFAAIFFTDMDECANNNGGCQH 846

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           EC+NTIGSY CSCHNG+TL +NGHDCKEGGCKYEIT+P+G I +PN+PDYYP K++C+WH
Sbjct: 847 ECKNTIGSYHCSCHNGFTLHDNGHDCKEGGCKYEITSPSGTITSPNYPDYYPGKKDCVWH 906

Query: 249 FTTTPGHRIKLV-------FQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYP 301
           F TTPGHRIKLV       F+ F++EPHQ CAYDHV +YDGDSPDS +LGRFCG K P+P
Sbjct: 907 FITTPGHRIKLVNITLPTIFKVFDMEPHQECAYDHVAIYDGDSPDSTSLGRFCGNKEPHP 966

Query: 302 IITGSNQLYMMFKSDASVQRKGFIATHTT 330
           I+   NQ++M+FKSD S+Q++GF A H T
Sbjct: 967 ILATGNQMFMVFKSDTSIQKQGFFAQHMT 995

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722615|ref|XP_003399699.1| PREDICTED: tolloid-like protein 2-like [Bombus terrestris]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 221/322 (68%), Positives = 260/322 (80%), Gaps = 7/322 (2%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            +FDEC L +HGCEH C N LGG+ECSCK GYELHSDGK C       DACGG+ + SNGT
Sbjct: 778  EFDECVLIEHGCEHNCINTLGGFECSCKPGYELHSDGKHC------EDACGGVFEDSNGT 831

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
            +TSPSFP  Y  NK C+WEI+APPQYRI+LNFTHFD+EGNN  Q  CEYD++ V SK+GD
Sbjct: 832  ITSPSFPVTYPGNKDCVWEIIAPPQYRITLNFTHFDLEGNNARQQDCEYDSVEVSSKLGD 891

Query: 130  SF-KSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
               +  G+FCGS+LP +I SEGN+LR+ F SDNS+QK+GF+A FFTD DEC  NNGGCQH
Sbjct: 892  DLLRKHGIFCGSRLPSLITSEGNSLRVTFTSDNSIQKTGFAAVFFTDMDECANNNGGCQH 951

Query: 189  ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            ECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN+PDYYP  ++C+WH
Sbjct: 952  ECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPMGTITSPNYPDYYPGLKDCVWH 1011

Query: 249  FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
            F T PGHRIKLVF+ FE+E HQ C YDH+ +YDGDSPDS  LG+FCG K P+PI+   NQ
Sbjct: 1012 FVTKPGHRIKLVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFCGTKEPHPILATGNQ 1071

Query: 309  LYMMFKSDASVQRKGFIATHTT 330
            +YM+FKSDASVQRKGF+ATH+T
Sbjct: 1072 MYMVFKSDASVQRKGFLATHST 1093

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424355|ref|XP_003493768.1| PREDICTED: tolloid-like protein 2-like [Bombus impatiens]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 221/322 (68%), Positives = 260/322 (80%), Gaps = 7/322 (2%)

Query: 10  KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
           +FDEC L +HGCEH C N LGG+ECSCK GYELHSDGK C       DACGG+ + SNGT
Sbjct: 631 EFDECVLIEHGCEHNCINTLGGFECSCKPGYELHSDGKHC------EDACGGVFEDSNGT 684

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
           +TSPSFP  Y  NK C+WEI+APPQYRI+LNFTHFD+EGNN  Q  CEYD++ V SK+GD
Sbjct: 685 ITSPSFPVTYPGNKDCVWEIIAPPQYRITLNFTHFDLEGNNARQQDCEYDSVEVSSKLGD 744

Query: 130 SF-KSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              +  G+FCGS+LP +I SEGN+LR+ F SDNS+QK+GF+A FFTD DEC  NNGGCQH
Sbjct: 745 DLLRKHGIFCGSRLPSLITSEGNSLRVTFTSDNSIQKTGFAAVFFTDMDECANNNGGCQH 804

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           ECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN+PDYYP  ++C+WH
Sbjct: 805 ECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPMGTITSPNYPDYYPGLKDCVWH 864

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
           F T PGHRIKLVF+ FE+E HQ C YDH+ +YDGDSPDS  LG+FCG K P+PI+   NQ
Sbjct: 865 FVTKPGHRIKLVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFCGTKEPHPILATGNQ 924

Query: 309 LYMMFKSDASVQRKGFIATHTT 330
           +YM+FKSDASVQRKGF+ATH+T
Sbjct: 925 MYMVFKSDASVQRKGFLATHST 946

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787501|ref|XP_393866.3| PREDICTED: tolkin [Apis mellifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/329 (67%), Positives = 259/329 (78%), Gaps = 14/329 (4%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            +FDEC L DHGCEH C N LGG+ECSCK GYELHSDGK C       DACGG+ + SNGT
Sbjct: 770  EFDECVLIDHGCEHNCINTLGGFECSCKPGYELHSDGKHC------EDACGGVFEDSNGT 823

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
            +TSPSFP  Y  NK C+WEI+APPQYRI+LNFTHFD+EG N  Q  CEYD++ V SK+GD
Sbjct: 824  ITSPSFPVTYPGNKDCVWEIIAPPQYRITLNFTHFDLEGTNARQQECEYDSVEVSSKLGD 883

Query: 130  S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
               +  GVFCGS+LP +I SEGN++R+ F SDNS+QK+GF+A FFTD DEC TNNGGCQH
Sbjct: 884  DILRKHGVFCGSRLPSLITSEGNSMRVTFTSDNSIQKTGFAAVFFTDMDECATNNGGCQH 943

Query: 189  ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            ECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN+PDYYP  ++C+WH
Sbjct: 944  ECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIAAPMGTITSPNYPDYYPGLKDCVWH 1003

Query: 249  FTTTPGHRIKL-------VFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYP 301
            F T PGHRIKL       VF+ FE+E HQ C YDH+ +YDGDSPDS  LG+FCG K P+P
Sbjct: 1004 FVTKPGHRIKLVNVLKNFVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFCGTKEPHP 1063

Query: 302  IITGSNQLYMMFKSDASVQRKGFIATHTT 330
            I+   NQ+YM+FKSDASVQRKGF ATH+T
Sbjct: 1064 ILATGNQMYMVFKSDASVQRKGFFATHST 1092

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022873|ref|XP_003695260.1| PREDICTED: LOW QUALITY PROTEIN: tolloid-like protein 2-like [Apis florea]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 220/322 (68%), Positives = 257/322 (79%), Gaps = 7/322 (2%)

Query: 10  KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
           +FDEC L DHGCEH C N LGG+ECSCK GYELHSDGK C       DACGG+ + SNGT
Sbjct: 459 EFDECVLIDHGCEHNCINTLGGFECSCKPGYELHSDGKHC------EDACGGVFEDSNGT 512

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
           +TSPSFP  Y  NK C+WEI+APPQYRI+LNFTHFD+EG N  Q  CEYD++ V SK+GD
Sbjct: 513 ITSPSFPVTYPGNKDCVWEIIAPPQYRITLNFTHFDLEGTNARQQECEYDSVEVSSKLGD 572

Query: 130 S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
              +  GVFCGS+LP +I SEGN++R+ F SDNS+QK+GF+A FFTD DEC TNNGGCQH
Sbjct: 573 DILRKHGVFCGSRLPSLITSEGNSMRVTFTSDNSIQKTGFAAVFFTDMDECATNNGGCQH 632

Query: 189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
           ECRNTIGSY CSCHNG+TL ENGHDCKE  CKYEI AP G I +PN+PDYYP  ++C+WH
Sbjct: 633 ECRNTIGSYQCSCHNGFTLHENGHDCKEAXCKYEIAAPMGTITSPNYPDYYPGLKDCVWH 692

Query: 249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
           F T PGHRIKLVF+ FE+E HQ C YDH+ +YDGDSPDS  LG+FCG K P+PI+   NQ
Sbjct: 693 FVTKPGHRIKLVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFCGTKEPHPILATGNQ 752

Query: 309 LYMMFKSDASVQRKGFIATHTT 330
           +YM+FKSDASVQRKGF ATH+T
Sbjct: 753 MYMVFKSDASVQRKGFFATHST 774

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851625|ref|XP_003701332.1| PREDICTED: tolloid-like protein 2-like [Megachile rotundata]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 215/322 (66%), Positives = 257/322 (79%), Gaps = 7/322 (2%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            +FDEC L +HGCEH C N LGG+ECSC  GYELHSDGK C       DACGG+ + SNGT
Sbjct: 770  EFDECVLIEHGCEHNCINTLGGFECSCNPGYELHSDGKHC------EDACGGVFEDSNGT 823

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
            +TSPSFP  Y  NK C+WEI+APPQYRI+LNFTHFD+EGNN  Q  CEYD++ V SK+GD
Sbjct: 824  ITSPSFPVTYPGNKDCVWEIIAPPQYRITLNFTHFDLEGNNARQQECEYDSVEVSSKLGD 883

Query: 130  S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
               +  G+FCGS+ PP+I SEGN +++ F SDNS+QK+GF+A F TD DEC  NNGGCQH
Sbjct: 884  DILRKHGIFCGSRPPPLITSEGNFMKVTFTSDNSIQKTGFAAVFLTDMDECANNNGGCQH 943

Query: 189  ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
            ECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN+PDYYP  ++C+WH
Sbjct: 944  ECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPVGTITSPNYPDYYPGLKDCVWH 1003

Query: 249  FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
            F T PGHRIKL+F+ FE+E HQ C YDH+ +YDGDSPDS  LG+FCG K P+PI+   NQ
Sbjct: 1004 FVTKPGHRIKLIFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFCGTKEPHPILATGNQ 1063

Query: 309  LYMMFKSDASVQRKGFIATHTT 330
            +YM+FKSDAS+QRKGF+ATH+T
Sbjct: 1064 MYMVFKSDASIQRKGFLATHST 1085

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135134|ref|XP_001663414.1| bone morphogenetic protein [Aedes aegypti] gi|108870300|gb|EAT34525.1| AAEL013239-PA [Aedes aegypti]

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 210/323 (65%), Positives = 262/323 (81%), Gaps = 8/323 (2%)

Query: 10   KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            + DEC   DHGCEH C N LGGYEC+C IGYELHSD K C       +ACGG LK  NGT
Sbjct: 896  EVDECERMDHGCEHECINTLGGYECACYIGYELHSDKKSC------ENACGGTLKQPNGT 949

Query: 70   LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSS-CEYDNLTVFSKIG 128
            + SPSFP+ Y   K C+WEI+APPQ++I+LNFTHF++EGN  +Q+S CEYD++ V+SK+ 
Sbjct: 950  ILSPSFPNEYPILKECVWEIIAPPQHKITLNFTHFELEGNTFYQASECEYDSVAVYSKVN 1009

Query: 129  -DSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQ 187
             DS K  GVFCG+K+PP I S+GN LR+EF SD ++QKSGF+A + TD DEC  NNGGCQ
Sbjct: 1010 EDSLKRHGVFCGNKIPPTITSDGNTLRVEFKSDKTIQKSGFAAIYSTDVDECAVNNGGCQ 1069

Query: 188  HECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIW 247
            HEC+NT+GSY+CSCHNGY L +NGHDCKEGGCKYE+++PNG I +PN+PDYYP K++CIW
Sbjct: 1070 HECKNTLGSYVCSCHNGYALQDNGHDCKEGGCKYEVSSPNGQIFSPNYPDYYPPKKDCIW 1129

Query: 248  HFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSN 307
            HFTTTPGHRI+LVF  F++EPHQ CAYDH+V+YDGDSP+S  LGRFCG KLP+P+ + SN
Sbjct: 1130 HFTTTPGHRIRLVFNVFDIEPHQECAYDHIVIYDGDSPESYALGRFCGAKLPHPLSSTSN 1189

Query: 308  QLYMMFKSDASVQRKGFIATHTT 330
            ++YM F +D+SVQRKGF A+H+T
Sbjct: 1190 EMYMAFNTDSSVQRKGFFASHST 1212

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
FB|FBgn0004885	1464	tok "tolkin" [Drosophila melan	0.948	0.213	0.637	2.2e-121
FB|FBgn0003719	1067	tld "tolloid" [Drosophila mela	0.939	0.290	0.536	4.4e-100
UNIPROTKB|Q9Y6L7	1015	TLL2 "Tolloid-like protein 2"	0.942	0.306	0.550	8.2e-99
UNIPROTKB|Q8JI28	1007	tll1 "Tolloid-like protein 1"	0.936	0.306	0.540	5.8e-98
UNIPROTKB|F1P398	1009	TLL1 "Tolloid-like protein 1"	0.936	0.306	0.537	7.4e-98
UNIPROTKB|F1NRI8	960	TLL2 "Uncharacterized protein"	0.948	0.326	0.529	7.4e-98
UNIPROTKB|F1Q3H3	969	TLL1 "Uncharacterized protein"	0.936	0.318	0.531	6.6e-97
UNIPROTKB|E9PD25	1036	TLL1 "Tolloid-like protein 1"	0.936	0.298	0.528	1.1e-96
UNIPROTKB|O43897	1013	TLL1 "Tolloid-like protein 1"	0.936	0.305	0.528	1.1e-96
UNIPROTKB|F1SBG0	894	TLL2 "Uncharacterized protein"	0.942	0.347	0.538	1.4e-96

FB|FBgn0004885 tok "tolkin" [Drosophila melanogaster (taxid:7227)]

 Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
 Identities = 204/320 (63%), Positives = 252/320 (78%)

Query:    12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLT 71
             DEC  ++HGCEH C N LGGYECSC+IG+ELHSD K C       DACGG++++ NGT+T
Sbjct:   956 DECETQNHGCEHECINTLGGYECSCRIGFELHSDKKHC------EDACGGVIEYPNGTIT 1009

Query:    72 SPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS- 130
             SPSFP++Y   K CIWEIVAPP++RISLNFTHFD+EG    QS C YD++TV+SK+G++ 
Sbjct:  1010 SPSFPEMYPLLKECIWEIVAPPKHRISLNFTHFDLEGTAHQQSDCGYDSVTVYSKLGENR 1069

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCGS +PP   SE NALR+EFHSD S+Q+SGF+A FFTD DEC  NNGGCQHEC
Sbjct:  1070 LKRIGTFCGSSIPPTATSESNALRLEFHSDKSIQRSGFAAVFFTDIDECAVNNGGCQHEC 1129

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
             RNTIGSYIC CHNGY++ ENGHDCKEG CKYEI+AP G I +PN+PD YP   +C+WHF 
Sbjct:  1130 RNTIGSYICMCHNGYSMHENGHDCKEGECKYEISAPFGTIFSPNYPDSYPPNADCVWHFI 1189

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
             TTPGHRIKL+F EF++E HQ C YD+V +YDG+S  S  LGRFCG K+P+PI + SNQ+Y
Sbjct:  1190 TTPGHRIKLIFNEFDVESHQECTYDNVAVYDGESESSSVLGRFCGDKIPFPISSTSNQMY 1249

Query:   311 MMFKSDASVQRKGFIATHTT 330
             M+ K+D + Q+ GF A+H+T
Sbjct:  1250 MVLKTDKNKQKNGFTASHST 1269

GO:0004222 "metalloendopeptidase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0007415 "defasciculation of motor neuron axon" evidence=IMP

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016485 "protein processing" evidence=IDA

GO:0007411 "axon guidance" evidence=IMP

FB|FBgn0003719 tld "tolloid" [Drosophila melanogaster (taxid:7227)]

 Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
 Identities = 171/319 (53%), Positives = 225/319 (70%)

Query:    12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILK--HSNGT 69
             DEC   DHGC+H C N LG Y+C C+ GYEL ++GK C       DACGG++    SNG+
Sbjct:   593 DECKFTDHGCQHLCINTLGSYQCGCRAGYELQANGKTC------EDACGGVVDATKSNGS 646

Query:    70 LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
             L SPS+PD+Y  +K C+WE+VAPP + + LNF+HFD+EG     + C YD L ++SK+ D
Sbjct:   647 LYSPSYPDVYPNSKQCVWEVVAPPNHAVFLNFSHFDLEGTRFHYTKCNYDYLIIYSKMRD 706

Query:   130 S-FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQH 188
             +  K  G++CG +LPPV+ SE + LR+EF+SD +VQ+SGF A F  D DEC  NNGGCQH
Sbjct:   707 NRLKKIGIYCGHELPPVVNSEQSILRLEFYSDRTVQRSGFVAKFVIDVDECSMNNGGCQH 766

Query:   189 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWH 248
              CRNT GSY CSC NGYTL ENGH+C E  CK+EIT   GV+++PN+P+ YP    C WH
Sbjct:   767 RCRNTFGSYQCSCRNGYTLAENGHNCTETRCKFEITTSYGVLQSPNYPEDYPRNIYCYWH 826

Query:   249 FTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQ 308
             F T  GHRI+L F +FE+E HQ C YD+V +YDG S +S TLG +CG + PY +I  +N+
Sbjct:   827 FQTVLGHRIQLTFHDFEVESHQECIYDYVAIYDGRSENSSTLGIYCGGREPYAVIASTNE 886

Query:   309 LYMMFKSDASVQRKGFIAT 327
             ++M+  +DA +QRKGF AT
Sbjct:   887 MFMVLATDAGLQRKGFKAT 905

GO:0008293 "torso signaling pathway" evidence=IGI

GO:0007362 "terminal region determination" evidence=IGI

GO:0005576 "extracellular region" evidence=NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0009880 "embryonic pattern specification" evidence=TAS

GO:0004222 "metalloendopeptidase activity" evidence=ISS;NAS

GO:0007352 "zygotic specification of dorsal/ventral axis" evidence=NAS

GO:0030513 "positive regulation of BMP signaling pathway" evidence=TAS

GO:0007378 "amnioserosa formation" evidence=NAS

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=TAS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0007313 "maternal specification of dorsal/ventral axis, oocyte, soma encoded" evidence=IMP

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016485 "protein processing" evidence=IDA

UNIPROTKB|Q9Y6L7 TLL2 "Tolloid-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 180/327 (55%), Positives = 226/327 (69%)

Query:     8 WFK-FDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKH 65
             +FK  DEC+  DHG CEH C N LG Y+C+C  GYEL +D K+C        ACGG +  
Sbjct:   573 FFKEVDECSWPDHGGCEHRCVNTLGSYKCACDPGYELAADKKMC------EVACGGFITK 626

Query:    66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
              NGT+TSP +P  Y  NK C+W++VAP QYRISL F  F++EGN++    C+YD + V S
Sbjct:   627 LNGTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDV----CKYDFVEVRS 682

Query:   126 KIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGG 185
              +    K  G FCGS+ P VI S+ N +R+EF SDN+V K GF A FF+DKDEC  +NGG
Sbjct:   683 GLSPDAKLHGRFCGSETPEVITSQSNNMRVEFKSDNTVSKRGFRAHFFSDKDECAKDNGG 742

Query:   186 CQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKREC 245
             CQHEC NT GSY+C C NGY L ENGHDCKE GC ++I++  G + +PN PD YPS+REC
Sbjct:   743 CQHECVNTFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPNWPDKYPSRREC 802

Query:   246 IWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLT--LGRFCGIKLPYPII 303
              W+ ++T GHR+KL F EFE+E HQ CAYDH+ MYDG  PDSL   LGRFCG K P P +
Sbjct:   803 TWNISSTAGHRVKLTFNEFEIEQHQECAYDHLEMYDG--PDSLAPILGRFCGSKKPDPTV 860

Query:   304 TGSNQLYMMFKSDASVQRKGFIATHTT 330
                + +++ F SDASVQRKGF A H+T
Sbjct:   861 ASGSSMFLRFYSDASVQRKGFQAVHST 887

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q8JI28 tll1 "Tolloid-like protein 1" [Xenopus laevis (taxid:8355)]

 Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
 Identities = 173/320 (54%), Positives = 224/320 (70%)

Query:    12 DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
             DECA  D+G CE  C N LG Y+CSC  GYEL  D K C        ACGG+L   NGT+
Sbjct:   571 DECARPDNGGCEQRCVNTLGSYKCSCDPGYELAPDKKSCEA------ACGGLLTKLNGTI 624

Query:    71 TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
             T+P++P  Y  NK C+W++VAP QYRIS+ F +F++EGN +    C+YD + V S +   
Sbjct:   625 TTPAWPKEYPPNKNCVWQVVAPSQYRISMKFDYFELEGNEV----CKYDYVEVRSGLSSD 680

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct:   681 SKLHGKFCGTEVPEVITSQFNNMRIEFKSDNTVSKKGFRAHFFSDKDECSKDNGGCQHEC 740

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
              NTIGSY+C C NG+ L +N HDCKE  C++ I + NGVI +PN PD YPS++EC W  +
Sbjct:   741 INTIGSYVCQCRNGFVLHDNKHDCKEAECEHRIHSSNGVITSPNWPDKYPSRKECTWEIS 800

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
              TPGHR+KL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct:   801 ATPGHRVKLSFSEFEIEQHQECAYDHLEVFDGETEKSSILGRLCGSKVPEPLVATGNEMF 860

Query:   311 MMFKSDASVQRKGFIATHTT 330
             + F SDASVQRKGF ATH+T
Sbjct:   861 IRFVSDASVQRKGFQATHST 880

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1P398 TLL1 "Tolloid-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 172/320 (53%), Positives = 222/320 (69%)

Query:    12 DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
             DECA  D+G CE  C N LG Y+C+C  GYEL  D K C        ACGG+L   NGT+
Sbjct:   572 DECAKPDNGGCEQRCVNTLGSYQCACDPGYELGPDKKSCEA------ACGGLLTKLNGTI 625

Query:    71 TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
             T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + + S +   
Sbjct:   626 TTPGWPKEYPPNKNCVWQVVAPTQYRISMKFEFFELEGNEV----CKYDYVEIRSGLSSD 681

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct:   682 SKLHGKFCGTEVPEVITSQYNNMRIEFRSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 741

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
              NT+GSY+C C NG+ L EN HDCKE  C+ +I +PNG+I +PN PD YPS++EC W  +
Sbjct:   742 INTVGSYVCQCRNGFVLHENKHDCKEAECEQKIHSPNGIIMSPNWPDKYPSRKECTWEIS 801

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
              TPG R+KL F EFE+E HQ CAYDH+ ++DG+S  S  LGR CG K+P P+I   N+++
Sbjct:   802 ATPGQRVKLTFNEFEIEQHQECAYDHLEVFDGESEKSPILGRLCGSKIPEPLIATGNKMF 861

Query:   311 MMFKSDASVQRKGFIATHTT 330
             + F SDASVQRKGF ATH+T
Sbjct:   862 LRFISDASVQRKGFQATHST 881

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

UNIPROTKB|F1NRI8 TLL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 172/325 (52%), Positives = 226/325 (69%)

Query:     8 WFK-FDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKH 65
             +FK  DEC+  D+G CE  C+N LG Y+C+C+ GYEL +D K C        ACGG +  
Sbjct:   518 FFKEMDECSQPDNGGCEQHCENTLGSYKCTCEPGYELTADKKSCEA------ACGGFITK 571

Query:    66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
              NGT+TSP +P  Y  NK C+W++VAP QYRISL F  FD+EGN++    C+YD + V S
Sbjct:   572 LNGTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFDLEGNDV----CKYDYVEVRS 627

Query:   126 KIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGG 185
              +    K  G FCGS+ P VI S  N +R+EF SDN+V K GF   FF+DKDEC  +NGG
Sbjct:   628 GLATDSKLHGKFCGSEKPEVITSYSNNIRLEFKSDNTVSKKGFKVHFFSDKDECSKDNGG 687

Query:   186 CQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKREC 245
             CQHEC NT GSY+C C NG+ L EN HDCKE GC++++++  G++ +PN PD YPS++EC
Sbjct:   688 CQHECINTFGSYVCQCRNGFKLHENNHDCKEAGCEHKLSSAEGMMSSPNWPDKYPSRKEC 747

Query:   246 IWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITG 305
              W+ + TPGHR+K+ F EFE+E HQ CAYDH+ MYDG +  S  LGRFCG K P P++  
Sbjct:   748 TWNISATPGHRVKVTFHEFEIEQHQECAYDHLEMYDGPNSKSPILGRFCGSKKPDPVVAS 807

Query:   306 SNQLYMMFKSDASVQRKGFIATHTT 330
             +N++++ F SDASVQRKGF A H+T
Sbjct:   808 TNKMFLRFYSDASVQRKGFQAKHST 832

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1Q3H3 TLL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
 Identities = 170/320 (53%), Positives = 223/320 (69%)

Query:    12 DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
             DECA  D G CE  C N LG Y+C+C+ GYEL  D + C        ACGG+L   NGT+
Sbjct:   532 DECAKPDRGGCEQRCLNTLGSYQCACEPGYELGPDKRSCEA------ACGGLLTKLNGTI 585

Query:    71 TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
             T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + ++S +   
Sbjct:   586 TTPGWPKEYPPNKNCVWQVVAPTQYRISMKFEFFELEGNEV----CKYDYVEIWSGLSSE 641

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct:   642 SKLHGKFCGAEVPEVITSQFNNMRIEFRSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 701

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
              NT+GSY+C C NG+ L EN HDCKE  C+ +I +P+G I +PN PD YPS++EC W  +
Sbjct:   702 VNTMGSYMCQCRNGFVLHENKHDCKEAECEQKIHSPSGFITSPNWPDKYPSRKECTWEIS 761

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
              TPGHRIKL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct:   762 ATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPEPLLATGNKMF 821

Query:   311 MMFKSDASVQRKGFIATHTT 330
             + F SDASVQRKGF ATH+T
Sbjct:   822 VRFISDASVQRKGFQATHST 841

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|E9PD25 TLL1 "Tolloid-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 169/320 (52%), Positives = 224/320 (70%)

Query:    12 DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
             DECA  D G CE  C N LG Y+C+C+ GYEL  D + C        ACGG+L   NGT+
Sbjct:   599 DECAKPDRGGCEQRCLNTLGSYQCACEPGYELGPDRRSCEA------ACGGLLTKLNGTI 652

Query:    71 TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
             T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + ++S +   
Sbjct:   653 TTPGWPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNEV----CKYDYVEIWSGLSSE 708

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct:   709 SKLHGKFCGAEVPEVITSQFNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 768

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
              NT+GSY+C C NG+ L +N HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  +
Sbjct:   769 VNTMGSYMCQCRNGFVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEIS 828

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
              TPGHRIKL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct:   829 ATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPDPLVATGNKMF 888

Query:   311 MMFKSDASVQRKGFIATHTT 330
             + F SDASVQRKGF ATH+T
Sbjct:   889 VRFVSDASVQRKGFQATHST 908

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|O43897 TLL1 "Tolloid-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 169/320 (52%), Positives = 224/320 (70%)

Query:    12 DECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
             DECA  D G CE  C N LG Y+C+C+ GYEL  D + C        ACGG+L   NGT+
Sbjct:   576 DECAKPDRGGCEQRCLNTLGSYQCACEPGYELGPDRRSCEA------ACGGLLTKLNGTI 629

Query:    71 TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 130
             T+P +P  Y  NK C+W++VAP QYRIS+ F  F++EGN +    C+YD + ++S +   
Sbjct:   630 TTPGWPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNEV----CKYDYVEIWSGLSSE 685

Query:   131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
              K  G FCG+++P VI S+ N +RIEF SDN+V K GF A FF+DKDEC  +NGGCQHEC
Sbjct:   686 SKLHGKFCGAEVPEVITSQFNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHEC 745

Query:   191 RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFT 250
              NT+GSY+C C NG+ L +N HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  +
Sbjct:   746 VNTMGSYMCQCRNGFVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEIS 805

Query:   251 TTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLY 310
              TPGHRIKL F EFE+E HQ CAYDH+ ++DG++  S  LGR CG K+P P++   N+++
Sbjct:   806 ATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPDPLVATGNKMF 865

Query:   311 MMFKSDASVQRKGFIATHTT 330
             + F SDASVQRKGF ATH+T
Sbjct:   866 VRFVSDASVQRKGFQATHST 885

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0001501 "skeletal system development" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0030198 "extracellular matrix organization" evidence=TAS

UNIPROTKB|F1SBG0 TLL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 176/327 (53%), Positives = 224/327 (68%)

Query:     8 WFK-FDECALEDHG-CEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKH 65
             +FK  DEC+  DHG CE  C N LG Y+C C  GYEL +D K C        ACGG +  
Sbjct:   452 FFKEVDECSWPDHGGCEQRCVNTLGSYKCVCDPGYELAADKKAC------EVACGGFITK 505

Query:    66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
              NGT+TSP +P  Y  NK C+W++VAP QYRISL F  F++EGN++    C+YD + V S
Sbjct:   506 LNGTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDV----CKYDFVEVRS 561

Query:   126 KIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGG 185
              +    +  G FCGS++P VI S+ N +R+EF SDN+V K GF A FF+DKDEC  +NGG
Sbjct:   562 GLSPDARLHGKFCGSEMPEVITSQSNNMRLEFKSDNTVSKRGFRAHFFSDKDECAKDNGG 621

Query:   186 CQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKREC 245
             CQHEC NT+GSY+C C NGY L EN  DCKE GC ++I++  G + +PN PD YPS+REC
Sbjct:   622 CQHECVNTVGSYLCRCRNGYRLHENQQDCKEAGCAHKISSAEGTLVSPNWPDKYPSRREC 681

Query:   246 IWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLT--LGRFCGIKLPYPII 303
              W+ ++T GHR+KL F EFE+E HQ CAYDH+ +YDG  PDSL   LGRFCG K P P++
Sbjct:   682 TWNISSTAGHRVKLTFNEFEIEQHQECAYDHLELYDG--PDSLAPVLGRFCGSKKPDPVV 739

Query:   304 TGSNQLYMMFKSDASVQRKGFIATHTT 330
                N L++ F SDASVQR+GF A H+T
Sbjct:   740 ASGNSLFLRFYSDASVQRRGFQAMHST 766

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9WVM6	TLL2_MOUSE	3, ., 4, ., 2, 4, ., -	0.5310	0.9424	0.3073	yes	N/A
O57460	TLL1_DANRE	3, ., 4, ., 2, 4, ., -	0.5312	0.9363	0.3023	yes	N/A
Q9Y6L7	TLL2_HUMAN	3, ., 4, ., 2, 4, ., -	0.5493	0.9363	0.3044	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	330
pfam00431	110	pfam00431, CUB, CUB domain	7e-41
cd00041	113	cd00041, CUB, CUB domain; extracellular domain; pr	1e-37
pfam00431	110	pfam00431, CUB, CUB domain	3e-37
cd00041	113	cd00041, CUB, CUB domain; extracellular domain; pr	8e-36
smart00042	102	smart00042, CUB, Domain first found in C1r, C1s, u	2e-34
smart00042	102	smart00042, CUB, Domain first found in C1r, C1s, u	1e-33
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	4e-06
pfam12947	36	pfam12947, EGF_3, EGF domain	4e-06
cd01475	224	cd01475, vWA_Matrilin, VWA_Matrilin: In cartilagin	5e-06
cd01475	224	cd01475, vWA_Matrilin, VWA_Matrilin: In cartilagin	1e-05
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	3e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	7e-05
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	2e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	8e-04
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	8e-04
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	0.003

>gnl|CDD|215916 pfam00431, CUB, CUB domain

 Score =  138 bits (349), Expect = 7e-41
 Identities = 48/110 (43%), Positives = 69/110 (62%)

Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 278
           C   +T  +G I +PN+P+ YP  ++C+W     PG+RI L FQ+F+LE H  C YD+V 
Sbjct: 1   CGGVLTESSGSITSPNYPNSYPPNKDCVWTIRAPPGYRISLTFQDFDLEDHDECGYDYVE 60

Query: 279 MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
           + DG    S  LGRFCG   P  I + SNQ+ + F SD+S+ ++GF AT+
Sbjct: 61  IRDGLPSSSPLLGRFCGSGPPEDIRSTSNQMTIKFVSDSSISKRGFKATY 110

Length = 110

>gnl|CDD|238001 cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

 Score =  130 bits (328), Expect = 1e-37
 Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 1/113 (0%)

Query: 219 CKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
           C   +TA  +G I +PN+P+ YP+   C+W     PG+RI+L F++F+LE    C+YD++
Sbjct: 1   CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNCSYDYL 60

Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
            +YDG S  S  LGRFCG  LP PII+  N L + F+SD+SV  +GF AT++ 
Sbjct: 61  EIYDGPSTSSPLLGRFCGSTLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113

Length = 113

>gnl|CDD|215916 pfam00431, CUB, CUB domain

 Score =  128 bits (325), Expect = 3e-37
 Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CGG+L  S+G++TSP++P+ Y  NK C+W I APP YRISL F  FD+E        C Y
Sbjct: 1   CGGVLTESSGSITSPNYPNSYPPNKDCVWTIRAPPGYRISLTFQDFDLED----HDECGY 56

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
           D + +   +  S    G FCGS  P  I S  N + I+F SD+S+ K GF A +
Sbjct: 57  DYVEIRDGLPSSSPLLGRFCGSGPPEDIRSTSNQMTIKFVSDSSISKRGFKATY 110

Length = 110

>gnl|CDD|238001 cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

 Score =  125 bits (315), Expect = 8e-36
 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 5/117 (4%)

Query: 59  CGGILK-HSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
           CGG L   ++GT++SP++P+ Y  N  C+W I APP YRI L F  FD+E +     +C 
Sbjct: 1   CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSP----NCS 56

Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT 174
           YD L ++     S    G FCGS LPP I+S GN+L + F SD+SV   GF A +  
Sbjct: 57  YDYLEIYDGPSTSSPLLGRFCGSTLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113

Length = 113

>gnl|CDD|214483 smart00042, CUB, Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

 Score =  121 bits (305), Expect = 2e-34
 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 1/102 (0%)

Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
           G I +PN+P  YP+  +C+W     PG+RI+L F +F+LE    C YD+V +YDG S  S
Sbjct: 1   GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDNCEYDYVEIYDGPSASS 60

Query: 288 LTLGRFCGIKLPYPIIT-GSNQLYMMFKSDASVQRKGFIATH 328
             LGRFCG + P P+I+  SN L + F SD+SVQ++GF A +
Sbjct: 61  PLLGRFCGSEAPPPVISSSSNSLTLTFVSDSSVQKRGFSARY 102

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain. Length = 102

>gnl|CDD|214483 smart00042, CUB, Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

 Score =  119 bits (300), Expect = 1e-33
 Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 5/106 (4%)

Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
           GT+TSP++P  Y  N  C+W I APP YRI L FT FD+E ++    +CEYD + ++   
Sbjct: 1   GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSD----NCEYDYVEIYDGP 56

Query: 128 GDSFKSQGVFCGSKLPP-VILSEGNALRIEFHSDNSVQKSGFSAFF 172
             S    G FCGS+ PP VI S  N+L + F SD+SVQK GFSA +
Sbjct: 57  SASSPLLGRFCGSEAPPPVISSSSNSLTLTFVSDSSVQKRGFSARY 102

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain. Length = 102

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)

Query: 175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCK 215
           D DEC + N  CQ+   C NT+GSY C C  GYT   +G +C+
Sbjct: 1   DIDECASGNP-CQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 179 CMTNNGGC-QH-ECRNTIGSYICSCHNGYTLLENGHDC 214
           C  NNGGC  +  C NT GS+ C+C +GYT   +G  C
Sbjct: 1   CAENNGGCHPNATCTNTGGSFTCTCKSGYTG--DGVTC 36

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|238752 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENG 211
             D C T +  CQ  C +T GSY+C+C  GY LLE+ 
Sbjct: 186 VPDLCATLSHVCQQVCISTPGSYLCACTEGYALLEDN 222

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands. Length = 224

>gnl|CDD|238752 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGK 47
           D CA   H C+  C +  G Y C+C  GY L  D K
Sbjct: 188 DLCATLSHVCQQVCISTPGSYLCACTEGYALLEDNK 223

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands. Length = 224

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTL 207
           D DEC + N  CQ+   C NT+GSY CSC  GYT 
Sbjct: 1   DIDECASGNP-CQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50
          DECA   + C++  TC N +G Y C C  GY    DG+ C 
Sbjct: 3  DECA-SGNPCQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 11 FDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC 49
           DECA   H C     C N +G +EC C  GYE + DG  C
Sbjct: 2  VDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHS 44
          DECA   + C++  TC N +G Y CSC  GY   +
Sbjct: 3  DECA-SGNPCQNGGTCVNTVGSYRCSCPPGYTGRN 36

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 36.3 bits (84), Expect = 8e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 178 ECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLEN 210
           EC  + G C +  C NT GSY CSC  GYT  + 
Sbjct: 1   EC-ASGGPCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)

Query: 178 ECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLEN 210
           EC   +  C +   C NT GSY C C  GYT   +
Sbjct: 1   EC-AASNPCSNGGTCVNTPGSYRCVCPPGYTGDRS 34

Length = 36

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	330
PF00431	110	CUB: CUB domain CUB domain entry Spermadhesins fam	99.94
cd00041	113	CUB CUB domain; extracellular domain; present in p	99.93
smart00042	102	CUB Domain first found in C1r, C1s, uEGF, and bone	99.91
KOG4586|consensus	156		99.85
PF00431	110	CUB: CUB domain CUB domain entry Spermadhesins fam	99.74
cd00041	113	CUB CUB domain; extracellular domain; present in p	99.71
smart00042	102	CUB Domain first found in C1r, C1s, uEGF, and bone	99.67
KOG4292|consensus	454		99.59
KOG4586|consensus	156		99.54
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	99.28
KOG1214|consensus	1289		99.27
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	99.25
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.9
KOG4292|consensus	454		98.86
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.84
PF12662	24	cEGF: Complement Clr-like EGF-like	98.59
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.39
KOG1219|consensus	4289		98.33
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.21
PF12662	24	cEGF: Complement Clr-like EGF-like	98.14
PF05428	311	CRF-BP: Corticotropin-releasing factor binding pro	97.81
KOG1214|consensus	1289		97.66
PF05428	311	CRF-BP: Corticotropin-releasing factor binding pro	97.6
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.59
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	97.58
smart00181	35	EGF Epidermal growth factor-like domain.	97.53
KOG4289|consensus	2531		97.5
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.5
KOG4260|consensus	350		97.46
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.44
KOG4260|consensus	350		97.39
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.28
KOG4289|consensus	2531		97.24
PF02408	120	CUB_2: CUB-like domain; InterPro: IPR003366 This d	97.21
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.94
smart00181	35	EGF Epidermal growth factor-like domain.	96.54
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.42
KOG1217|consensus	487		96.38
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.31
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	96.08
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.13
KOG1217|consensus	487		94.51
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	94.1
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	93.43
KOG1219|consensus	4289		93.1
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	92.64
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	91.27
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	85.88

>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork

Probab=99.94  E-value=7.7e-26  Score=161.91  Aligned_cols=110  Identities=45%  Similarity=0.874  Sum_probs=101.4

Q ss_pred             CcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCC
Q psy8443         219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKL  298 (330)
Q Consensus       219 C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~  298 (330)
                      |++.+....|.|.||+||..|+++..|.|+|+++++++|.|+|..|+|+....|..|+|.|++|....+..++++||...
T Consensus         1 Cg~~~~~~~g~i~Sp~yp~~y~~~~~C~w~i~~~~~~~I~l~f~~~~~~~~~~c~~d~l~v~~g~~~~~~~~~~~cg~~~   80 (110)
T PF00431_consen    1 CGGRLTNNSGIISSPNYPSNYPSNSDCTWTITAPPGHRIRLTFLSFDLESSDSCCQDYLEVYDGNDESSPLLGRFCGSSP   80 (110)
T ss_dssp             SEEEECSSEEEEESTTTTS-SSSSEEEEEEEE-STTEEEEEEEEEEEB--TTTSTSSEEEEESSSSTTSEEEEEESSSSC
T ss_pred             CcCEEECCeEEEECCCCCCCCCCCCcEeEEEEecccceeeeccccccceeeeeecccceeEEeeccccceeeeeccCCcC
Confidence            67889999999999999999999999999999999999999999999998888999999999999888899999999888


Q ss_pred             CCcEEecCCEEEEEEEeCCCCCCCCeEEEE
Q psy8443         299 PYPIITGSNQLYMMFKSDASVQRKGFIATH  328 (330)
Q Consensus       299 ~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y  328 (330)
                      +..++|.++.|+|+|+++....++||+|+|
T Consensus        81 ~~~i~s~~~~l~i~f~s~~~~~~~gF~~~y  110 (110)
T PF00431_consen   81 PPSIISSSNSLFIRFHSDSSNSSRGFKATY  110 (110)
T ss_dssp             CEEEEESSSEEEEEEEESSSSTTSEEEEEE
T ss_pred             CccEEECCCEEEEEEEECCCCCCccEEEEC
Confidence            889999999999999999999999999998

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....

>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

Probab=99.93  E-value=5.9e-25  Score=158.12  Aligned_cols=112  Identities=46%  Similarity=0.907  Sum_probs=104.5

Q ss_pred             CcceeecC-cceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCC
Q psy8443         219 CKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIK  297 (330)
Q Consensus       219 C~~~~~~~-~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~  297 (330)
                      |+..+... .|.|.||+||..|+++.+|.|+|+++++.+|.|+|..|+|+....|..|+|+||+|.......+.++||..
T Consensus         1 C~~~~~~~~~g~i~Sp~~p~~~~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~Cg~~   80 (113)
T cd00041           1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNCSYDYLEIYDGPSTSSPLLGRFCGST   80 (113)
T ss_pred             CCCEEccCCCeEEECCCCCCCCCCCCcEEEEEEcCCCCEEEEEEeCcccccCCCCCCcEEEEEcCCCCccccceeeECCC
Confidence            56677777 99999999999999999999999999999999999999999888899999999999877677899999999


Q ss_pred             CCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         298 LPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       298 ~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      .+..++|+++.|+|+|+++....+.||++.|++
T Consensus        81 ~~~~~~s~~~~~~i~f~s~~~~~~~GF~~~y~~  113 (113)
T cd00041          81 LPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA  113 (113)
T ss_pred             CCCCEEecCCEEEEEEEeCCCCCCCCEEEEEEC
Confidence            888899999999999999998899999999985

>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

Probab=99.91  E-value=9.1e-24  Score=148.82  Aligned_cols=101  Identities=48%  Similarity=0.901  Sum_probs=92.4

Q ss_pred             ceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCCC-cEEecC
Q psy8443         228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPY-PIITGS  306 (330)
Q Consensus       228 g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~-~~~s~~  306 (330)
                      |.|.||+||..||++..|.|+|+++++.+|.|+|..|+|+....|..|+|+|++|......++.++||...+. .++|.+
T Consensus         1 G~i~Sp~yP~~y~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~Cg~~~~~~~~~s~~   80 (102)
T smart00042        1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDNCEYDYVEIYDGPSASSPLLGRFCGSELPPPVISSSS   80 (102)
T ss_pred             CEEeCCCCCcCCCCCCcEEEEEECCCCeEEEEEEEEEeccCCCCeeEeEEEEEeCCCCCCceeEEEecCcCCCCeEEcCC
Confidence            6899999999999999999999999999999999999999888899999999999876677788999998655 466779


Q ss_pred             CEEEEEEEeCCCCCCCCeEEEE
Q psy8443         307 NQLYMMFKSDASVQRKGFIATH  328 (330)
Q Consensus       307 ~~~~v~f~s~~~~~~~GF~~~y  328 (330)
                      |.|+|.|+++....++||+|+|
T Consensus        81 n~~~i~f~s~~~~~~~GF~~~y  102 (102)
T smart00042       81 NSLTVTFVSDSSVQKRGFSARY  102 (102)
T ss_pred             CEEEEEEEeCCCCCCCCeEEEC
Confidence            9999999999888889999987

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.

>KOG4586|consensus

Probab=99.85  E-value=5.9e-21  Score=129.60  Aligned_cols=106  Identities=29%  Similarity=0.621  Sum_probs=100.3

Q ss_pred             ecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEE-EeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCCCcE
Q psy8443         224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPI  302 (330)
Q Consensus       224 ~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~-~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~~~  302 (330)
                      ....+.++||+||..||++.+|...|.+.+-+-|.+.|+. |.+|.+-.|..|+++|.||+-..+++|++|||.+.|+.|
T Consensus        46 ~~n~~Iftspn~ps~ypp~r~cv~vi~~~p~~~ve~~Fde~y~IEps~EC~fD~iEvrDGpfGFSPlI~rfCG~~nPp~I  125 (156)
T KOG4586|consen   46 LQNFNIFTSPNFPSRYPPNRDCVRVIHSRPQHDVEVKFDEVYHIEPSYECPFDFIEVRDGPFGFSPLIARFCGDRNPPEI  125 (156)
T ss_pred             ecccceEecCCccccCCCCcceEEeEecccccceEEeeeeeEEecccccCCCCcccccCCCcCccHHHHHHhccCCChhh
Confidence            4467889999999999999999999999999999999976 999999999999999999999999999999999999999


Q ss_pred             EecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443         303 ITGSNQLYMMFKSDASVQRKGFIATHT  329 (330)
Q Consensus       303 ~s~~~~~~v~f~s~~~~~~~GF~~~y~  329 (330)
                      .|++..|||+|.||.....+||.|+|.
T Consensus       126 rs~grFlWIkF~sD~ele~~gfsa~y~  152 (156)
T KOG4586|consen  126 RSVGRFLWIKFRSDSELEYQGFSAEYA  152 (156)
T ss_pred             eecCcEEEEEEcccchhhhcccceeee
Confidence            999999999999999999999999994

>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork

Probab=99.74  E-value=2.9e-17  Score=117.27  Aligned_cols=110  Identities=45%  Similarity=0.836  Sum_probs=98.8

Q ss_pred             CCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccC
Q psy8443          59 CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFC  138 (330)
Q Consensus        59 C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c  138 (330)
                      |++.+....|.|.||+||..|+.+..|.|.|+++++..|.|.|..|+++...    .|..|+|.|+++.......++++|
T Consensus         1 Cg~~~~~~~g~i~Sp~yp~~y~~~~~C~w~i~~~~~~~I~l~f~~~~~~~~~----~c~~d~l~v~~g~~~~~~~~~~~c   76 (110)
T PF00431_consen    1 CGGRLTNNSGIISSPNYPSNYPSNSDCTWTITAPPGHRIRLTFLSFDLESSD----SCCQDYLEVYDGNDESSPLLGRFC   76 (110)
T ss_dssp             SEEEECSSEEEEESTTTTS-SSSSEEEEEEEE-STTEEEEEEEEEEEB--TT----TSTSSEEEEESSSSTTSEEEEEES
T ss_pred             CcCEEECCeEEEECCCCCCCCCCCCcEeEEEEecccceeeeccccccceeee----eecccceeEEeeccccceeeeecc
Confidence            6777888999999999999999999999999999999999999999998765    588999999999988788889999


Q ss_pred             CCCCCCcEEccCCeEEEEEEeCCCCcccCceEEE
Q psy8443         139 GSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF  172 (330)
Q Consensus       139 ~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~  172 (330)
                      |...+..+.+.++.+++.|.++......||.++|
T Consensus        77 g~~~~~~i~s~~~~l~i~f~s~~~~~~~gF~~~y  110 (110)
T PF00431_consen   77 GSSPPPSIISSSNSLFIRFHSDSSNSSRGFKATY  110 (110)
T ss_dssp             SSSCCEEEEESSSEEEEEEEESSSSTTSEEEEEE
T ss_pred             CCcCCccEEECCCEEEEEEEECCCCCCccEEEEC
Confidence            9888889999999999999999999999999876

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....

>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

Probab=99.71  E-value=3.3e-16  Score=112.37  Aligned_cols=111  Identities=47%  Similarity=0.931  Sum_probs=100.4

Q ss_pred             CCCeeecC-CceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccccc
Q psy8443          59 CGGILKHS-NGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVF  137 (330)
Q Consensus        59 C~~~~~~~-~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~  137 (330)
                      |++.+... .|.|.||+||..|+.+..|.|.|++++|.+|.|.|..|+++...    .|..|++.|+++........+++
T Consensus         1 C~~~~~~~~~g~i~Sp~~p~~~~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~----~C~~d~l~i~~g~~~~~~~~~~~   76 (113)
T cd00041           1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSP----NCSYDYLEIYDGPSTSSPLLGRF   76 (113)
T ss_pred             CCCEEccCCCeEEECCCCCCCCCCCCcEEEEEEcCCCCEEEEEEeCcccccCC----CCCCcEEEEEcCCCCccccceee
Confidence            66777666 99999999999999999999999999999999999999998654    78899999999987666778899


Q ss_pred             CCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEe
Q psy8443         138 CGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFF  173 (330)
Q Consensus       138 c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~  173 (330)
                      |+...+..+.+.++.+.+.|.++......||.+.|.
T Consensus        77 Cg~~~~~~~~s~~~~~~i~f~s~~~~~~~GF~~~y~  112 (113)
T cd00041          77 CGSTLPPPIISSGNSLTVRFRSDSSVTGRGFKATYS  112 (113)
T ss_pred             ECCCCCCCEEecCCEEEEEEEeCCCCCCCCEEEEEE
Confidence            999988889999999999999999889999999874

>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

Probab=99.67  E-value=1.3e-15  Score=106.98  Aligned_cols=101  Identities=51%  Similarity=0.956  Sum_probs=88.6

Q ss_pred             ceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCC-cE
Q psy8443          68 GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPP-VI  146 (330)
Q Consensus        68 g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~-~~  146 (330)
                      |.|.||+||..|+.+..|.|.|+++++.+|.|.|..|+++...    .|..|+|.|+++.......++++|+...+. .+
T Consensus         1 G~i~Sp~yP~~y~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~----~C~~d~l~i~~g~~~~~~~~~~~Cg~~~~~~~~   76 (102)
T smart00042        1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSD----NCEYDYVEIYDGPSASSPLLGRFCGSELPPPVI   76 (102)
T ss_pred             CEEeCCCCCcCCCCCCcEEEEEECCCCeEEEEEEEEEeccCCC----CeeEeEEEEEeCCCCCCceeEEEecCcCCCCeE
Confidence            6799999999999999999999999999999999999998765    698999999988775556677999988665 45


Q ss_pred             EccCCeEEEEEEeCCCCcccCceEEE
Q psy8443         147 LSEGNALRIEFHSDNSVQKSGFSAFF  172 (330)
Q Consensus       147 ~s~~~~~~~~f~~~~~~~~~Gf~~~~  172 (330)
                      .+.++.+.+.|.++......||.++|
T Consensus        77 ~s~~n~~~i~f~s~~~~~~~GF~~~y  102 (102)
T smart00042       77 SSSSNSLTVTFVSDSSVQKRGFSARY  102 (102)
T ss_pred             EcCCCEEEEEEEeCCCCCCCCeEEEC
Confidence            66699999999999887789998864

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.

>KOG4292|consensus

Probab=99.59  E-value=1.3e-14  Score=121.65  Aligned_cols=213  Identities=23%  Similarity=0.372  Sum_probs=139.9

Q ss_pred             ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCC
Q psy8443          64 KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLP  143 (330)
Q Consensus        64 ~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~  143 (330)
                      .+..|.+.+|++|..|.....|.|.+..++++++.+++..+++....   ..|....+.+.......   ....++...+
T Consensus       175 ~q~sg~~~~~~~p~~~v~s~~c~Wli~t~p~q~l~irv~~~~~~pt~---n~c~s~~L~i~m~~~s~---~~~~~~~~~~  248 (454)
T KOG4292|consen  175 TQNSGSIPSPNDPDTYVASSICNWLIDTPPGQRLYIRVVHLHLAPTI---NECESASLTIFMSYKSE---KYGGHGNSRP  248 (454)
T ss_pred             CcccccccCCCCcccccccchhhhhhhcCCCcceeEEEEeccCCccc---ccccceeEEEEeccCCc---ccccccCcCh
Confidence            45669999999999999999999999999999999999998775542   46888888887764321   1111111111


Q ss_pred             CcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCc--ccCCCcc
Q psy8443         144 PVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC--KEGGCKY  221 (330)
Q Consensus       144 ~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C--~~~~C~~  221 (330)
                      ...-.....+...|.+.               .-.+..-...+    .               ....+..+  +...|+.
T Consensus       249 ~~~~~~as~~~~~~~s~---------------s~s~~i~~S~~----~---------------~r~s~~~~~~~~~~C~~  294 (454)
T KOG4292|consen  249 QECGRNASCGSDFYSSM---------------STSKVIFSSGN----L---------------NRRSRTNETYQISDCNR  294 (454)
T ss_pred             hhccccccccchhhhhh---------------hhhhhhccccc----c---------------ccccccCCCcccccccc
Confidence            11110000000000000               00000000000    0               00001111  2256888


Q ss_pred             eeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCCCc
Q psy8443         222 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYP  301 (330)
Q Consensus       222 ~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~~  301 (330)
                      .+....|.++||+||..|+++..|+|++.++.++.|.+.|+.|.++....|..|+++...|......+++++++...+..
T Consensus       295 ~~~~~~G~~~Sp~yp~~y~~~l~Ct~~l~~~~g~~l~v~fh~~~~~~s~~C~~d~l~~r~~~~~~~~l~g~~~~~ls~~~  374 (454)
T KOG4292|consen  295 TYHGKFGNLTSPGYPQNYPNNLDCTTHLTVPGGHTLVVFFHEFSIENSRECINDYLVLRNGNSGNGPLLGPHGAGLSPEL  374 (454)
T ss_pred             ceecceeEEcCCCCcccCCCCCcceEEEEcCCCCEEEEEeecccchhhhhhccceEEeccCCCCCCCccCcccCCCCccc
Confidence            88889999999999999999999999999999999999999999999999999999999988888888888444444444


Q ss_pred             EEecCCEEEEEEEeC
Q psy8443         302 IITGSNQLYMMFKSD  316 (330)
Q Consensus       302 ~~s~~~~~~v~f~s~  316 (330)
                      +.+.++.+.+...+.
T Consensus       375 ~ss~s~g~~l~~~~~  389 (454)
T KOG4292|consen  375 VSSASLGLSLIDLSM  389 (454)
T ss_pred             cccccccceeeeece
Confidence            455555555554443

>KOG4586|consensus

Probab=99.54  E-value=5.1e-14  Score=96.12  Aligned_cols=106  Identities=32%  Similarity=0.533  Sum_probs=98.7

Q ss_pred             ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeE-EEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCC
Q psy8443          64 KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKL  142 (330)
Q Consensus        64 ~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~-~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~  142 (330)
                      .++.+.+.||+||..|+++..|...+...+.+-+.+.|+. +.+|..-    .|..|.+++.||+-.-+++++++||...
T Consensus        46 ~~n~~Iftspn~ps~ypp~r~cv~vi~~~p~~~ve~~Fde~y~IEps~----EC~fD~iEvrDGpfGFSPlI~rfCG~~n  121 (156)
T KOG4586|consen   46 LQNFNIFTSPNFPSRYPPNRDCVRVIHSRPQHDVEVKFDEVYHIEPSY----ECPFDFIEVRDGPFGFSPLIARFCGDRN  121 (156)
T ss_pred             ecccceEecCCccccCCCCcceEEeEecccccceEEeeeeeEEecccc----cCCCCcccccCCCcCccHHHHHHhccCC
Confidence            5678889999999999999999999999999999999984 6788765    8999999999999988999999999999


Q ss_pred             CCcEEccCCeEEEEEEeCCCCcccCceEEEe
Q psy8443         143 PPVILSEGNALRIEFHSDNSVQKSGFSAFFF  173 (330)
Q Consensus       143 ~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~  173 (330)
                      |+.+.+.+..+|+.|.+|......||.+.|-
T Consensus       122 Pp~Irs~grFlWIkF~sD~ele~~gfsa~y~  152 (156)
T KOG4586|consen  122 PPEIRSVGRFLWIKFRSDSELEYQGFSAEYA  152 (156)
T ss_pred             ChhheecCcEEEEEEcccchhhhcccceeee
Confidence            9999999999999999999999999999884

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=99.28  E-value=5.7e-12  Score=71.71  Aligned_cols=40  Identities=53%  Similarity=1.091  Sum_probs=35.5

Q ss_pred             eeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          10 KFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |||||....+.|.  +.|+|+.|+|+|.|++||.+..++..|
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~C   42 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTTC   42 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCcC
Confidence            8999999888897  499999999999999999977776665

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1214|consensus

Probab=99.27  E-value=1.3e-11  Score=109.94  Aligned_cols=49  Identities=35%  Similarity=0.690  Sum_probs=45.4

Q ss_pred             eeeeeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443           4 LRIRWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      +++.|.|++||++.++.|..  +|+|.+|+|+|.|..||+++.|+.+|+..
T Consensus       727 dgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i  777 (1289)
T KOG1214|consen  727 DGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLI  777 (1289)
T ss_pred             CCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEe
Confidence            67889999999999999975  99999999999999999999999999754

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=99.25  E-value=5.6e-12  Score=67.85  Aligned_cols=36  Identities=47%  Similarity=1.217  Sum_probs=31.2

Q ss_pred             ccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |...+++|+|.|+|++|+|+|+|++||.|..|+++|
T Consensus         1 C~~~NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    1 CSVNNGGCSHICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             CTTGGGGSSSEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCCCcCCCCccCCCceEeECCCCCEECcCCCCC
Confidence            556678999999999999999999999999999987

...

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.90  E-value=1e-09  Score=59.14  Aligned_cols=36  Identities=61%  Similarity=1.279  Sum_probs=31.1

Q ss_pred             cccCCCcccccccccCCceeeeccCCeEEccCCCCc
Q psy8443         179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC  214 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C  214 (330)
                      |..+++.|++.|.++.++|.|.|++||.|+.|+++|
T Consensus         1 C~~~NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    1 CSVNNGGCSHICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             CTTGGGGSSSEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCCCcCCCCccCCCceEeECCCCCEECcCCCCC
Confidence            556688899999999999999999999999999887

...

>KOG4292|consensus

Probab=98.86  E-value=2e-08  Score=85.09  Aligned_cols=157  Identities=20%  Similarity=0.224  Sum_probs=105.8

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG  135 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~  135 (330)
                      ...|++.+....|.+.||+||..|+++..|+|++.++.++.+.+.|..+.++...    .|.+|++....+......+.+
T Consensus       289 ~~~C~~~~~~~~G~~~Sp~yp~~y~~~l~Ct~~l~~~~g~~l~v~fh~~~~~~s~----~C~~d~l~~r~~~~~~~~l~g  364 (454)
T KOG4292|consen  289 ISDCNRTYHGKFGNLTSPGYPQNYPNNLDCTTHLTVPGGHTLVVFFHEFSIENSR----ECINDYLVLRNGNSGNGPLLG  364 (454)
T ss_pred             ccccccceecceeEEcCCCCcccCCCCCcceEEEEcCCCCEEEEEeecccchhhh----hhccceEEeccCCCCCCCccC
Confidence            4678888888999999999999999999999999999999999888888887766    899998888888777777777


Q ss_pred             ccCCCCCCCcEEccCCe-EEEEEEeC-CCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCC
Q psy8443         136 VFCGSKLPPVILSEGNA-LRIEFHSD-NSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD  213 (330)
Q Consensus       136 ~~c~~~~~~~~~s~~~~-~~~~f~~~-~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~  213 (330)
                      . ++...++.+.+..+. +.+...+. .......|..... +.-                                    
T Consensus       365 ~-~~~~ls~~~~ss~s~g~~l~~~~~~i~~~~~~~~~~~~-~~~------------------------------------  406 (454)
T KOG4292|consen  365 P-HGAGLSPELVSSASLGLSLIDLSMGVVVGEDSFRILPR-NPT------------------------------------  406 (454)
T ss_pred             c-ccCCCCccccccccccceeeeeceeeEeeccccccccc-Ccc------------------------------------
Confidence            7 444444444443332 22222221 1111122221110 000                                    


Q ss_pred             cccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEE
Q psy8443         214 CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRI  257 (330)
Q Consensus       214 C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i  257 (330)
                         ..++.......|.-..++|+.-+|+..+|.|....+....+
T Consensus       407 ---e~~~~~s~~~~g~~~~~g~~~~~pn~~dc~~~~~d~~~~~~  447 (454)
T KOG4292|consen  407 ---ELPGGPSASENGKGKNMGYNSITPNRDDCDDLELDEDQLDA  447 (454)
T ss_pred             ---cCCCCccccccCCCCCCCCcccCCCcccccceecccccccc
Confidence               01111222345667788999999999999998776655433

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.84  E-value=3.1e-09  Score=60.43  Aligned_cols=40  Identities=48%  Similarity=0.991  Sum_probs=34.6

Q ss_pred             ccCccccCCCccc--ccccccCCceeeeccCCeEEccCCCCc
Q psy8443         175 DKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDC  214 (330)
Q Consensus       175 ~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~~~~~C  214 (330)
                      |+|||......|.  ..|+|+.|+|.|.|++||.+..++..|
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~C   42 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTTC   42 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCcC
Confidence            6899999988887  569999999999999999977666554

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.59  E-value=3.3e-08  Score=47.57  Aligned_cols=22  Identities=45%  Similarity=1.067  Sum_probs=20.1

Q ss_pred             eEEEecCCCcEEcCCCCccccc
Q psy8443          31 GYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus        31 sy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      ||+|.|++||++..++++|+++
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DI   22 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDI   22 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccC
Confidence            6999999999999999999664

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.39  E-value=1.9e-07  Score=50.50  Aligned_cols=34  Identities=50%  Similarity=1.157  Sum_probs=26.5

Q ss_pred             ccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          14 CALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        14 C~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |+..++.|..  .|+|++++|.|.|++||+  +||..|
T Consensus         1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~--GdG~~C   36 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGGSYTCTCKPGYE--GDGFFC   36 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TTSEEEEE-CEEE--CCSTCE
T ss_pred             CCCCCCCCCCCcEeecCCCCEEeECCCCCc--cCCcCC
Confidence            5556678875  999999999999999999  888776

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1219|consensus

Probab=98.33  E-value=6.7e-07  Score=88.30  Aligned_cols=44  Identities=27%  Similarity=0.499  Sum_probs=34.8

Q ss_pred             cccCceEEEec--ccCccccCCCcccccccccCCceeeeccCCeEE
Q psy8443         164 QKSGFSAFFFT--DKDECMTNNGGCQHECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       164 ~~~Gf~~~~~~--~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l  207 (330)
                      ++.||++..|.  .++||..+.+.-++.|.|+.|+|.|-|-+||..
T Consensus      3928 C~~gyTG~~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~g 3973 (4289)
T KOG1219|consen 3928 CPNGYTGKRCEARGISECSKNVCGTGGQCINIPGSFHCNCTPGILG 3973 (4289)
T ss_pred             CCCCccCceeecccccccccccccCCceeeccCCceEeccChhHhc
Confidence            34455555543  388999988777888999999999999999983

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.21  E-value=1.3e-06  Score=48.90  Aligned_cols=36  Identities=47%  Similarity=1.150  Sum_probs=30.2

Q ss_pred             eeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          10 KFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |+|||... ..|.+  .|+|+.|+|.|.|++||.   +|+.|
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~---~g~~C   38 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNC   38 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc---cCCcC
Confidence            58999864 56876  999999999999999997   56666

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.14  E-value=1.2e-06  Score=42.12  Aligned_cols=21  Identities=48%  Similarity=1.168  Sum_probs=19.8

Q ss_pred             ceeeeccCCeEEccCCCCccc
Q psy8443         196 SYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       196 sy~C~C~~G~~l~~~~~~C~~  216 (330)
                      ||+|.|++||.|..++++|.|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~D   21 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCED   21 (24)
T ss_pred             CEEeeCCCCCcCCCCCCcccc
Confidence            699999999999999999986

>PF05428 CRF-BP: Corticotropin-releasing factor binding protein (CRF-BP); InterPro: IPR008435 This family consists of several eukaryotic corticotropin-releasing factor binding proteins (CRF-BP or CRH-BP)

Probab=97.81  E-value=0.00031  Score=56.60  Aligned_cols=84  Identities=20%  Similarity=0.373  Sum_probs=66.0

Q ss_pred             CCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCC-CceEEEEcC--------CCC------CccceeeccCCCCCC-cEE
Q psy8443         240 PSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCA-YDHVVMYDG--------DSP------DSLTLGRFCGIKLPY-PII  303 (330)
Q Consensus       240 ~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~-~d~l~i~~g--------~~~------~~~~~~~~cg~~~~~-~~~  303 (330)
                      .+...|--.+.+.+++.|.++|..+|+.    |. .|+|.|+||        ++.      ...+...||++.... .+.
T Consensus        76 ~pq~~Ca~y~iaePd~~IeI~~~~vdid----C~~G~ll~v~DGW~LnGe~FPs~~DHplpl~eR~~efC~~~~~~~~~r  151 (311)
T PF05428_consen   76 RPQLVCAAYFIAEPDELIEIEFDHVDID----CEGGDLLKVFDGWELNGEKFPSSQDHPLPLEERYTEFCDSGPNRRSFR  151 (311)
T ss_pred             CCCceeEEEEEeCCCeEEEEEEEEeecc----CCCCCEEEEEeceEECccCCcCcccCCCchHHHHHHhccCCCCcceeE
Confidence            4577899999999999999999999995    33 799999998        221      233456899985543 689


Q ss_pred             ecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443         304 TGSNQLYMMFKSDASVQRKGFIATHT  329 (330)
Q Consensus       304 s~~~~~~v~f~s~~~~~~~GF~~~y~  329 (330)
                      |+.|.+.|.|+-..  .+.||.++.+
T Consensus       152 SSQNvAmi~fRip~--~GsgFt~~vR  175 (311)
T PF05428_consen  152 SSQNVAMIQFRIPS--PGSGFTLTVR  175 (311)
T ss_pred             eccceEEEEEEecC--CCCceEEEEE
Confidence            99999999999876  5677877754

Corticotropin-releasing hormone (CRH) plays multiple roles in vertebrate species. In mammals, it is the major hypothalamic releasing factor for pituitary adrenocorticotropin secretion, and is a neurotransmitter or neuromodulator at other sites in the central nervous system. In non-mammalian vertebrates, CRH not only acts as a neurotransmitter and hypophysiotropin, it also acts as a potent thyrotropin-releasing factor, allowing CRH to regulate both the adrenal and thyroid axes, especially in development. CRH-BP is thought to play an inhibitory role in which it binds CRH and other CRH-like ligands and prevents the activation of CRH receptors. There is however evidence that CRH-BP may also exhibit diverse extra and intracellular roles in a cell specific fashion and at specific times in development [].

>KOG1214|consensus

Probab=97.66  E-value=2.8e-05  Score=70.63  Aligned_cols=45  Identities=36%  Similarity=0.743  Sum_probs=40.7

Q ss_pred             eeeeeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443           4 LRIRWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      +++.|.|+|||.  +..|.+  .|.|++|++.|.|.+||.  +||..|++.
T Consensus       820 DG~~c~dvDeC~--psrChp~A~CyntpgsfsC~C~pGy~--GDGf~CVP~  866 (1289)
T KOG1214|consen  820 DGHQCTDVDECS--PSRCHPAATCYNTPGSFSCRCQPGYY--GDGFQCVPD  866 (1289)
T ss_pred             CccccccccccC--ccccCCCceEecCCCcceeecccCcc--CCCceecCC
Confidence            688999999998  467876  999999999999999998  999999865

>PF05428 CRF-BP: Corticotropin-releasing factor binding protein (CRF-BP); InterPro: IPR008435 This family consists of several eukaryotic corticotropin-releasing factor binding proteins (CRF-BP or CRH-BP)

Probab=97.60  E-value=0.023  Score=46.12  Aligned_cols=164  Identities=22%  Similarity=0.305  Sum_probs=108.9

Q ss_pred             CCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCC--------------cccccccCCCCCCC-
Q psy8443          80 IKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS--------------FKSQGVFCGSKLPP-  144 (330)
Q Consensus        80 ~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~--------------~~~~~~~c~~~~~~-  144 (330)
                      .+...|-..+.+.|...|.+.+..++++...       -|.+.+.||..-.              ......+|++.... 
T Consensus        76 ~pq~~Ca~y~iaePd~~IeI~~~~vdidC~~-------G~ll~v~DGW~LnGe~FPs~~DHplpl~eR~~efC~~~~~~~  148 (311)
T PF05428_consen   76 RPQLVCAAYFIAEPDELIEIEFDHVDIDCEG-------GDLLKVFDGWELNGEKFPSSQDHPLPLEERYTEFCDSGPNRR  148 (311)
T ss_pred             CCCceeEEEEEeCCCeEEEEEEEEeeccCCC-------CCEEEEEeceEECccCCcCcccCCCchHHHHHHhccCCCCcc
Confidence            4577899888999999999999999986432       4788888875321              11223678876654 


Q ss_pred             cEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcccCCCcceee
Q psy8443         145 VILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEIT  224 (330)
Q Consensus       145 ~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~~C~~~~~  224 (330)
                      .+.|+.|...+.|+-..  .+.||.+......+                                      ..+|.....
T Consensus       149 ~~rSSQNvAmi~fRip~--~GsgFt~~vR~~~N--------------------------------------p~PCNVisq  188 (311)
T PF05428_consen  149 SFRSSQNVAMIQFRIPS--PGSGFTLTVRFIKN--------------------------------------PFPCNVISQ  188 (311)
T ss_pred             eeEeccceEEEEEEecC--CCCceEEEEEeCCC--------------------------------------CCCceEecc
Confidence            56888888877777643  46788877655433                                      144555556


Q ss_pred             cCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCC----------CCCCC--CceEEEEcCCCC---Cccc
Q psy8443         225 APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEP----------HQTCA--YDHVVMYDGDSP---DSLT  289 (330)
Q Consensus       225 ~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~----------~~~C~--~d~l~i~~g~~~---~~~~  289 (330)
                      .+.|.++.-+|    ....+|...+.-|.    .+++.++.|..          ...|.  .|||+|--|..-   ....
T Consensus       189 ~~~g~fTl~n~----gq~rNCSfs~iyP~----~i~i~~L~lG~~~~l~~~~~~~~~C~~~~D~Vei~Gg~GlD~skM~~  260 (311)
T PF05428_consen  189 SPEGRFTLRNP----GQRRNCSFSIIYPV----VISISDLSLGHTNGLELQRGVIHGCQGSGDFVEIGGGNGLDTSKMFP  260 (311)
T ss_pred             CCCcceEEECC----CcccCcEEEEEeee----EEEEEEEecccccCcccccccccCCCCcCCeEEECCcCCcCcccCEE
Confidence            66777665443    56778998887654    55555666644          23464  799999765432   3444


Q ss_pred             eeeccCCCC
Q psy8443         290 LGRFCGIKL  298 (330)
Q Consensus       290 ~~~~cg~~~  298 (330)
                      ++.+||...
T Consensus       261 ~~~lCg~~~  269 (311)
T PF05428_consen  261 VADLCGSFS  269 (311)
T ss_pred             hhHhhccCC
Confidence            567888754

Corticotropin-releasing hormone (CRH) plays multiple roles in vertebrate species. In mammals, it is the major hypothalamic releasing factor for pituitary adrenocorticotropin secretion, and is a neurotransmitter or neuromodulator at other sites in the central nervous system. In non-mammalian vertebrates, CRH not only acts as a neurotransmitter and hypophysiotropin, it also acts as a potent thyrotropin-releasing factor, allowing CRH to regulate both the adrenal and thyroid axes, especially in development. CRH-BP is thought to play an inhibitory role in which it binds CRH and other CRH-like ligands and prevents the activation of CRH receptors. There is however evidence that CRH-BP may also exhibit diverse extra and intracellular roles in a cell specific fashion and at specific times in development [].

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.59  E-value=7.3e-05  Score=41.27  Aligned_cols=35  Identities=49%  Similarity=1.132  Sum_probs=28.3

Q ss_pred             eeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          10 KFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      ++|+|... ..|.  +.|.|+.++|.|.|++||.    |+.|
T Consensus         1 ~~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~----g~~C   37 (38)
T cd00054           1 DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT----GRNC   37 (38)
T ss_pred             CcccCCCC-CCcCCCCEeECCCCCeEeECCCCCc----CCcC
Confidence            47888753 4674  4899999999999999998    6666

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=97.58  E-value=3.7e-05  Score=61.97  Aligned_cols=45  Identities=40%  Similarity=0.791  Sum_probs=39.5

Q ss_pred             ceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCC
Q psy8443         168 FSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH  212 (330)
Q Consensus       168 f~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~  212 (330)
                      +....|.+.++|...++.|.+.|.++.|+|.|.|+.||.++.++.
T Consensus       179 l~~~~C~~~~~C~~~~~~c~~~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         179 FQGKICVVPDLCATLSHVCQQVCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             cccccCcCchhhcCCCCCccceEEcCCCCEEeECCCCccCCCCCC
Confidence            445567789999999889999999999999999999999987765

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.53  E-value=0.0001  Score=39.91  Aligned_cols=28  Identities=50%  Similarity=1.050  Sum_probs=23.2

Q ss_pred             cccCCCCCCee-eEEeecceEEEecCCCcE
Q psy8443          13 ECALEDHGCEH-TCKNILGGYECSCKIGYE   41 (330)
Q Consensus        13 eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~   41 (330)
                      +|... ..|.+ +|+++.++|.|.|++||.
T Consensus         1 ~C~~~-~~C~~~~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181        1 ECASG-GPCSNGTCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             CCCCc-CCCCCCEEECCCCCeEeECCCCCc
Confidence            35443 56877 999999999999999998

>KOG4289|consensus

Probab=97.50  E-value=0.0028  Score=61.64  Aligned_cols=36  Identities=33%  Similarity=0.919  Sum_probs=30.7

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+||+|-++  +|.+  .|...+|+|+|.|.+||+    |..|+
T Consensus      1237 TeiDlCYs~--pC~nng~C~srEggYtCeCrpg~t----GehCE 1274 (2531)
T KOG4289|consen 1237 TEIDLCYSG--PCGNNGRCRSREGGYTCECRPGFT----GEHCE 1274 (2531)
T ss_pred             chhHhhhcC--CCCCCCceEEecCceeEEecCCcc----cccee
Confidence            468999874  5654  999999999999999999    88885

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.50  E-value=6.9e-05  Score=40.50  Aligned_cols=29  Identities=55%  Similarity=1.259  Sum_probs=21.2

Q ss_pred             cccCCCcccc--cccccCCceeeeccCCeEE
Q psy8443         179 CMTNNGGCQH--ECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       179 C~~~~~~C~~--~C~n~~gsy~C~C~~G~~l  207 (330)
                      |..+++.|+.  .|.++.++|.|.|++||..
T Consensus         1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCCCCCCCcEeecCCCCEEeECCCCCcc
Confidence            4556667764  5999999999999999994

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG4260|consensus

Probab=97.46  E-value=5.1e-05  Score=59.87  Aligned_cols=37  Identities=30%  Similarity=0.598  Sum_probs=32.6

Q ss_pred             eeeEeeccccCCCCCCee--eEEeecceEEEecCCCcEE
Q psy8443           6 IRWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYEL   42 (330)
Q Consensus         6 ~~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l   42 (330)
                      .-|.|||||...+.+|..  .|+|+.|||.|.+.+||..
T Consensus       231 ~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  231 EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             cccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            359999999987778863  9999999999999999983

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.44  E-value=0.00015  Score=40.30  Aligned_cols=36  Identities=53%  Similarity=1.221  Sum_probs=27.4

Q ss_pred             ccCccccCCCcccc--cccccCCceeeeccCCeEEccCCCCc
Q psy8443         175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC  214 (330)
Q Consensus       175 ~~~eC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~~~~~C  214 (330)
                      ++++|... ..|.+  .|.++.++|.|.|++||.   ++..|
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~---~g~~C   38 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNC   38 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc---cCCcC
Confidence            36778763 44654  799999999999999998   45554

>KOG4260|consensus

Probab=97.39  E-value=5.5e-05  Score=59.68  Aligned_cols=44  Identities=32%  Similarity=0.602  Sum_probs=37.1

Q ss_pred             cccCceEEE--ecccCccccCCCccccc--ccccCCceeeeccCCeEE
Q psy8443         164 QKSGFSAFF--FTDKDECMTNNGGCQHE--CRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       164 ~~~Gf~~~~--~~~~~eC~~~~~~C~~~--C~n~~gsy~C~C~~G~~l  207 (330)
                      +..||.+.-  |+|+|||...+.+|.+.  |+|+.|||.|.+++||..
T Consensus       222 CkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  222 CKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             hcccceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            456666543  67999999999999764  999999999999999985

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.28  E-value=0.0004  Score=36.56  Aligned_cols=23  Identities=43%  Similarity=1.213  Sum_probs=20.6

Q ss_pred             CCCee--eEEeec-ceEEEecCCCcE
Q psy8443          19 HGCEH--TCKNIL-GGYECSCKIGYE   41 (330)
Q Consensus        19 ~~C~~--~C~n~~-gsy~C~C~~G~~   41 (330)
                      .+|.+  +|++.. ++|.|.|++||+
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCc
Confidence            36766  999999 999999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG4289|consensus

Probab=97.24  E-value=0.0028  Score=61.61  Aligned_cols=46  Identities=28%  Similarity=0.647  Sum_probs=41.8

Q ss_pred             CCcccCceEEEec-ccCccccCCCcccccccccCCceeeeccCCeEE
Q psy8443         162 SVQKSGFSAFFFT-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       162 ~~~~~Gf~~~~~~-~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l  207 (330)
                      +.++.||++.||. .+|+|..+++..++.|....|+|+|.|++||..
T Consensus      1224 CrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tG 1270 (2531)
T KOG4289|consen 1224 CRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTG 1270 (2531)
T ss_pred             EeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccc
Confidence            5688999999996 899999998777888999999999999999985

>PF02408 CUB_2: CUB-like domain; InterPro: IPR003366 This domain is found in a family of hypothetical Caenorhabditis elegans proteins

Probab=97.21  E-value=0.0065  Score=43.51  Aligned_cols=82  Identities=12%  Similarity=0.260  Sum_probs=54.0

Q ss_pred             CCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCCCcEEecCCEEEEEEEeC
Q psy8443         237 DYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSD  316 (330)
Q Consensus       237 ~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~~~~s~~~~~~v~f~s~  316 (330)
                      ..+|.+.+|.|.|.+|.|.-++|++.. ++..     .|.+.|.|.....    ..+-... ...+...++...|...+.
T Consensus        36 ~~~p~n~~C~y~i~iP~G~~a~v~~~~-~~~~-----~d~i~v~D~~g~~----~~~~~~~-~~~~~~~~p~~~i~v~t~  104 (120)
T PF02408_consen   36 PQFPANQNCTYQINIPKGYYAKVTLSA-NLND-----NDSITVTDSNGKS----EYITSSD-NEPFYFVAPGFSIQVQTV  104 (120)
T ss_pred             cccCCCCceEEEEEcCCceEEEEEEEE-ecCC-----CCEEEEEecCCCE----EEeecCC-CcEEEEeCCCeEEEEEEC
Confidence            347788899999999999988887644 2222     4999999954322    1122221 223455555567777777


Q ss_pred             CCCCCCCeEEEEe
Q psy8443         317 ASVQRKGFIATHT  329 (330)
Q Consensus       317 ~~~~~~GF~~~y~  329 (330)
                      ......+|++.|.
T Consensus       105 t~~~~F~f~v~w~  117 (120)
T PF02408_consen  105 TGNSQFGFKVQWQ  117 (120)
T ss_pred             CCCcEEEEEEEEE
Confidence            6666788888874

The aligned region has no known function nor do any of the proteins which possess it. However, this domain is related to the CUB domain (IPR000859 from INTERPRO). The aligned region is approximately 130 amino acids long and contains two conserved cysteine residues.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.94  E-value=0.001  Score=35.91  Aligned_cols=24  Identities=42%  Similarity=0.998  Sum_probs=20.8

Q ss_pred             CCCCe--eeEEeecceEEEecCCCcE
Q psy8443          18 DHGCE--HTCKNILGGYECSCKIGYE   41 (330)
Q Consensus        18 ~~~C~--~~C~n~~gsy~C~C~~G~~   41 (330)
                      ...|.  ..|+++.++|.|.|+.||.
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCc
Confidence            35676  4999999999999999998

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.54  E-value=0.0024  Score=34.33  Aligned_cols=25  Identities=56%  Similarity=1.043  Sum_probs=21.3

Q ss_pred             Ccccc-cccccCCceeeeccCCeEEc
Q psy8443         184 GGCQH-ECRNTIGSYICSCHNGYTLL  208 (330)
Q Consensus       184 ~~C~~-~C~n~~gsy~C~C~~G~~l~  208 (330)
                      ..|.+ .|.+..++|.|.|++||.+.
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCccC
Confidence            45666 79999999999999999854

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.42  E-value=0.0032  Score=33.08  Aligned_cols=21  Identities=38%  Similarity=0.838  Sum_probs=18.2

Q ss_pred             cccccccC-CceeeeccCCeEE
Q psy8443         187 QHECRNTI-GSYICSCHNGYTL  207 (330)
Q Consensus       187 ~~~C~n~~-gsy~C~C~~G~~l  207 (330)
                      .++|++.. ++|.|.|++||..
T Consensus         9 ~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    9 GGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             TEEEEEESTSEEEEEEBTTEES
T ss_pred             CeEEEeCCCCCEEeECCCCCcc
Confidence            45799998 9999999999983

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG1217|consensus

Probab=96.38  E-value=0.012  Score=53.39  Aligned_cols=34  Identities=38%  Similarity=0.943  Sum_probs=30.0

Q ss_pred             eeEeeccccCCCCCCee--eEEeecceEEEecCCCcE
Q psy8443           7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYE   41 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~   41 (330)
                      .|.++++|..... |.+  +|.+..++|.|.|++||.
T Consensus       267 ~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g~~  302 (487)
T KOG1217|consen  267 TCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPGFT  302 (487)
T ss_pred             eeeeccccCCCCc-cCCCCeeecCCCcceeeCCCCCC
Confidence            5789999998654 665  999999999999999998

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.31  E-value=0.0049  Score=33.65  Aligned_cols=31  Identities=52%  Similarity=1.026  Sum_probs=23.8

Q ss_pred             cCccccCCCcc--cccccccCCceeeeccCCeEE
Q psy8443         176 KDECMTNNGGC--QHECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       176 ~~eC~~~~~~C--~~~C~n~~gsy~C~C~~G~~l  207 (330)
                      +++|... ..|  .+.|.+..++|.|.|+.||..
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCcC
Confidence            4667653 345  456999999999999999973

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=96.08  E-value=0.0046  Score=25.04  Aligned_cols=13  Identities=38%  Similarity=1.157  Sum_probs=9.8

Q ss_pred             EEecCCCcEEcCCCCcc
Q psy8443          33 ECSCKIGYELHSDGKIC   49 (330)
Q Consensus        33 ~C~C~~G~~l~~dg~~C   49 (330)
                      .|.|++||+    |..|
T Consensus         1 ~C~C~~G~~----G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWT----GPNC   13 (13)
T ss_dssp             EEEE-TTEE----TTTT
T ss_pred             CccCcCCCc----CCCC
Confidence            589999999    7665

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.13  E-value=0.021  Score=30.48  Aligned_cols=25  Identities=48%  Similarity=0.865  Sum_probs=20.3

Q ss_pred             Cccc--ccccccCCceeeeccCCeEEc
Q psy8443         184 GGCQ--HECRNTIGSYICSCHNGYTLL  208 (330)
Q Consensus       184 ~~C~--~~C~n~~gsy~C~C~~G~~l~  208 (330)
                      ..|.  +.|++..++|.|.|+.||...
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCccc
Confidence            3454  569999999999999999844

>KOG1217|consensus

Probab=94.51  E-value=0.14  Score=46.42  Aligned_cols=46  Identities=28%  Similarity=0.472  Sum_probs=34.2

Q ss_pred             ccCceEE---EecccCccccCCC-cccccccccCCceeeeccCCeEEccC
Q psy8443         165 KSGFSAF---FFTDKDECMTNNG-GCQHECRNTIGSYICSCHNGYTLLEN  210 (330)
Q Consensus       165 ~~Gf~~~---~~~~~~eC~~~~~-~C~~~C~n~~gsy~C~C~~G~~l~~~  210 (330)
                      ..||.+.   .+.++++|..... ...++|.+..+.|.|.|++||.....
T Consensus       257 ~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  257 PEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             CCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCC
Confidence            4444443   3568899998864 33457999999999999999997654

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=94.10  E-value=0.074  Score=28.55  Aligned_cols=28  Identities=36%  Similarity=0.828  Sum_probs=19.2

Q ss_pred             CCee--eEEeec-ceEEEecCCCcEEcCCCCcc
Q psy8443          20 GCEH--TCKNIL-GGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        20 ~C~~--~C~n~~-gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|+.  .|++.. |++.|.|..||...  +..|
T Consensus         6 ~cP~NA~C~~~~dG~eecrCllgyk~~--~~~C   36 (37)
T PF12946_consen    6 KCPANAGCFRYDDGSEECRCLLGYKKV--GGKC   36 (37)
T ss_dssp             ---TTEEEEEETTSEEEEEE-TTEEEE--TTEE
T ss_pred             cCCCCcccEEcCCCCEEEEeeCCcccc--CCCc
Confidence            4543  899887 99999999999953  4445

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=93.43  E-value=0.1  Score=27.24  Aligned_cols=25  Identities=32%  Similarity=0.748  Sum_probs=17.7

Q ss_pred             cccccccccCCceeeeccCCeEEccC
Q psy8443         185 GCQHECRNTIGSYICSCHNGYTLLEN  210 (330)
Q Consensus       185 ~C~~~C~n~~gsy~C~C~~G~~l~~~  210 (330)
                      .|.+.|...... .|.|+.||.+.++
T Consensus         7 ~CpA~CDpn~~~-~C~CPeGyIlde~   31 (34)
T PF09064_consen    7 ECPADCDPNSPG-QCFCPEGYILDEG   31 (34)
T ss_pred             cCCCccCCCCCC-ceeCCCceEecCC
Confidence            466666654433 8999999998754

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>KOG1219|consensus

Probab=93.10  E-value=0.07  Score=55.18  Aligned_cols=44  Identities=27%  Similarity=0.498  Sum_probs=35.9

Q ss_pred             cccCceEEEec-ccCccccCCCcccccccccCCceeeeccCCeEE
Q psy8443         164 QKSGFSAFFFT-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       164 ~~~Gf~~~~~~-~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l  207 (330)
                      +..-|.+..|. ++..|..+++.-+++|....++|.|.|+.||+.
T Consensus      3890 CpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG 3934 (4289)
T KOG1219|consen 3890 CPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTG 3934 (4289)
T ss_pred             CcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccC
Confidence            33444555554 788899999888899999999999999999983

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=92.64  E-value=0.15  Score=26.66  Aligned_cols=24  Identities=38%  Similarity=0.826  Sum_probs=17.9

Q ss_pred             CCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          20 GCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        20 ~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|..  +|++.  ..+|.|++||+    |..|
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~----G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYT----GPDC   32 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCc----CCCC
Confidence            4654  88865  57899999998    6554

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=91.27  E-value=0.25  Score=26.58  Aligned_cols=23  Identities=30%  Similarity=0.533  Sum_probs=17.8

Q ss_pred             cccccccC-CceeeeccCCeEEcc
Q psy8443         187 QHECRNTI-GSYICSCHNGYTLLE  209 (330)
Q Consensus       187 ~~~C~n~~-gsy~C~C~~G~~l~~  209 (330)
                      ...|.+.. |++.|.|..||....
T Consensus        10 NA~C~~~~dG~eecrCllgyk~~~   33 (37)
T PF12946_consen   10 NAGCFRYDDGSEECRCLLGYKKVG   33 (37)
T ss_dssp             TEEEEEETTSEEEEEE-TTEEEET
T ss_pred             CcccEEcCCCCEEEEeeCCccccC
Confidence            45688776 999999999999653

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=85.88  E-value=0.79  Score=32.31  Aligned_cols=37  Identities=35%  Similarity=0.750  Sum_probs=27.9

Q ss_pred             eeccccCC-CCCCee-eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALE-DHGCEH-TCKNIL--GGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~-~~~C~~-~C~n~~--gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||.+|... .+-|-| +|.-.+  ..+.|.|+.||.    |..|+
T Consensus        41 ~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYt----GeRCE   81 (139)
T PHA03099         41 AIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYT----GIRCQ   81 (139)
T ss_pred             ccccCChhhCCEeECCEEEeeccCCCceeECCCCcc----ccccc
Confidence            45667643 345766 888775  789999999999    99994

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	330
4aqb_A	361	Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 L		1e-32
3dem_A	278	Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278		2e-32
1nt0_A	286	Crystal Structure Of The Cub1-Egf-Cub2 Region Of Ma		5e-32
4gz9_A	577	Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2		3e-28
4gz9_A	577	Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2		1e-07
2qqk_A	579	Neuropilin-2 A1a2b1b2 Domains In Complex With A Sem		2e-25
3kq4_B	457	Structure Of Intrinsic Factor-Cobalamin Bound To It		8e-22
3kq4_B	457	Structure Of Intrinsic Factor-Cobalamin Bound To It		1e-17
1szb_A	170	Crystal Structure Of The Human Mbl-Associated Prote		3e-20
1szb_A	170	Crystal Structure Of The Human Mbl-Associated Prote		3e-05
2qqo_A	460	Crystal Structure Of The A2b1b2 Domains From Human		1e-14
2qqo_A	460	Crystal Structure Of The A2b1b2 Domains From Human		3e-11
2wno_A	149	X-Ray Structure Of Cub_c Domain From Tsg-6 Length =		4e-14
2qqm_A	450	Crystal Structure Of The A2b1b2 Domains From Human		5e-14
1nzi_A	159	Crystal Structure Of The Cub1-Egf Interaction Domai		2e-12
1nzi_A	159	Crystal Structure Of The Cub1-Egf Interaction Domai		1e-08
3pob_A	115	Crystal Structure Of Masp-1 Cub2 Domain In Complex		9e-10
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		2e-05

>pdb|4AQB|A Chain A, Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 Length = 361

Iteration: 1
 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 132/279 (47%), Gaps = 29/279 (10%)
Query: 63  LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLT 122
           L +  G + SP +PD Y  +    W I  P  +RI L F HF++E + L    CEYD   
Sbjct: 5   LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYL----CEYD--- 57
Query: 123 VFSKIGDSFKSQGVFCGSKL--------PPVILSEGNALRIEFHSD--NSVQKSGFSAFF 172
            + K+    +    FCG +           V+LS G+ + I F SD  N  + +GF A +
Sbjct: 58  -YVKVETEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHY 116
Query: 173 F-TDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNG 228
              D DEC         C H C N IG Y CSC  GY L  +   C+        T   G
Sbjct: 117 MAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTG 176
Query: 229 VIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELE--PHQTCAYDHVVMYDGDSP 285
           VI +P+ P+ YP   EC++      G  + L F++ F++E  P   C YD++ +  G   
Sbjct: 177 VITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK- 235
Query: 286 DSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
               LG FCG K P PI T S+ + ++F SD S + +G+
Sbjct: 236 ---VLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGW 271

>pdb|3DEM|A Chain A, Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 132/279 (47%), Gaps = 29/279 (10%)
Query: 63  LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLT 122
           L +  G + SP +PD Y  +    W I  P  +RI L F HF++E + L    CEYD   
Sbjct: 5   LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYL----CEYD--- 57
Query: 123 VFSKIGDSFKSQGVFCGSKL--------PPVILSEGNALRIEFHSD--NSVQKSGFSAFF 172
            + K+    +    FCG +           V+LS G+ + I F SD  N  + +GF A +
Sbjct: 58  -YVKVETEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHY 116
Query: 173 F-TDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNG 228
              D DEC         C H C N IG Y CSC  GY L  +   C+        T   G
Sbjct: 117 MAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTG 176
Query: 229 VIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELE--PHQTCAYDHVVMYDGDSP 285
           VI +P+ P+ YP   EC++      G  + L F++ F++E  P   C YD++ +  G   
Sbjct: 177 VITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK- 235
Query: 286 DSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
               LG FCG K P PI T S+ + ++F SD S + +G+
Sbjct: 236 ---VLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGW 271

>pdb|1NT0|A Chain A, Crystal Structure Of The Cub1-Egf-Cub2 Region Of Masp2 Length = 286

Iteration: 1
 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
           G L SP FP+ Y  ++   W + APP +R+ L FTHF++E        CEYD    F K+
Sbjct: 9   GRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLE----LSYRCEYD----FVKL 60
Query: 128 GDSFKSQGVFCGSKLPPVILSEGN--------ALRIEFHSDNSVQK--SGFSAFFFT-DK 176
               K     CG +      + GN        +L++ FHSD S +K  +GF AF+   D 
Sbjct: 61  TSGTKVLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDV 120
Query: 177 DECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTP 233
           DEC T+ G    C H C   +G Y CSC  GY L +N H C         T  +G + +P
Sbjct: 121 DECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSALCSGQVFTGRSGFLSSP 180
Query: 234 NHPDYYPSKRECIWHFTTTPGHRIKLVFQE---FELEPHQTCAYDHVVMYDGDSPDSLTL 290
            +P  YP    C ++     G  I L F E    E+ P   C YD + +      D    
Sbjct: 181 EYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKI----QTDKREY 236
Query: 291 GRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           G FCG  LP  I T SN++ + F +D S    G+   +T+
Sbjct: 237 GPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 276

>pdb|4GZ9|A Chain A, Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2b1b2) Length = 577

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 52/283 (18%)
Query: 57  DACGGILKHSN-GTLTSPSFPDLYIKNKTCIWEIVAP-PQYRISLNFT-HFDIEGNNLFQ 113
           D CGG +K  N G LTSP +P  Y  ++ C W I AP P  RI +NF  HFD+E  +   
Sbjct: 7   DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLEDRD--- 63
Query: 114 SSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFF 173
             C+YD + V     +  +  G FCG   P  ++S G  L I+F SD     +GFS    
Sbjct: 64  --CKYDYVEVIDGENEGGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSI--- 118
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTP 233
                                          Y + + G +C +       TAP GVIK+P
Sbjct: 119 ------------------------------RYEIFKRGPECSQ-----NYTAPTGVIKSP 143
Query: 234 NHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQT------CAYDHVVMYDGDSPDS 287
             P+ YP+  EC +         I L F+ F+LE          C YD + ++DG     
Sbjct: 144 GFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVG 203
Query: 288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
             +GR+CG K P  I + S  L M+F +D+++ ++GF A ++ 
Sbjct: 204 PHIGRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSV 246

>pdb|4GZ9|A Chain A, Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2b1b2) Length = 577

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 209 ENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTT-TPGHRIKLVFQ-EFEL 266
           E G    + G   +I  P G + +P +P  Y    +C W      P  RI + F   F+L
Sbjct: 1   ETGFRSDKCGGTIKIENP-GYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDL 59
Query: 267 EPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
           E  + C YD+V + DG++      G+FCG   P P+++    L++ F SD      GF
Sbjct: 60  E-DRDCKYDYVEVIDGENEGGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGF 116

>pdb|2QQK|A Chain A, Neuropilin-2 A1a2b1b2 Domains In Complex With A Semaphorin-Blocking Fab Length = 579

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 51/279 (18%)
Query: 59  CGGILKHSN-GTLTSPSFPDLYIKNKTCIWEIVAP-PQYRISLNFT-HFDIEGNNLFQSS 115
           CGG L   + G +TSP +P  Y  ++ C W + AP P  +I LNF  HF+IE ++     
Sbjct: 6   CGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHD----- 60
Query: 116 CEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
           C+YD + +     +S    G  CG+  PP I+S G+ L I+F SD + Q +GFS      
Sbjct: 61  CKYDFIEIRDGDSESADLLGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSL----- 115
Query: 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNH 235
                                        Y + + G +     C    T+PNG I++P  
Sbjct: 116 ----------------------------RYEIFKTGSE----DCSKNFTSPNGTIESPGF 143
Query: 236 PDYYPSKRECIWHFTTTPGHRIKLVFQEFELE--PHQT----CAYDHVVMYDGDSPDSLT 289
           P+ YP   +C +     P   I L F  F+LE  P Q     C YD + ++DG       
Sbjct: 144 PEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPL 203
Query: 290 LGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
           +G++CG K P  + + +  L + F +D +V + GF A +
Sbjct: 204 IGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARY 242

>pdb|3KQ4|B Chain B, Structure Of Intrinsic Factor-Cobalamin Bound To Its Receptor Cubilin Length = 457

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 125/281 (44%), Gaps = 51/281 (18%)
Query: 52  SVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL 111
           ++ A  AC        GT TSP+FP+ Y  N  CI+ I       I+++FT+F +E    
Sbjct: 110 AISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLE---- 165
Query: 112 FQSSCEYDNLTVFSKIGDSFKSQ----GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSG 167
            ++   Y   T F +I D    +    G+F GS LPP I+S  N L ++F SD    +SG
Sbjct: 166 -EAIGNY--YTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSG 222
Query: 168 FSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPN 227
           FSA++                                        D    GC   +T  +
Sbjct: 223 FSAYW----------------------------------------DGSSTGCGGNLTTSS 242
Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
           G   +PN+P  Y    EC W   ++ G   +L F++F LE H  C  D++ +YDG S +S
Sbjct: 243 GTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNS 302
Query: 288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
             L + CG + P  I +  + +++  ++D   Q +GF A +
Sbjct: 303 HLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEY 343

>pdb|3KQ4|B Chain B, Structure Of Intrinsic Factor-Cobalamin Bound To Its Receptor Cubilin Length = 457

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 278
           C   +T   G I++P HP+ YP    C WH    P H I L+F+ F LE H  C  D++ 
Sbjct: 1   CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLE 60
Query: 279 MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
           +YD DS  S  LGR+CG  +P  + +  N L ++F +D+ +  +GF+  +
Sbjct: 61  VYDTDSETS--LGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINY 108

>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19 (Map19) Length = 170

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
           G L SP FP  Y  ++   W + APP YR+ L FTHFD+E ++L    CEYD    F K+
Sbjct: 13  GRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHL----CEYD----FVKL 64
Query: 128 GDSFKSQGVFCGS------KLP--PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DK 176
               K     CG       + P      S G++L I F SD S +K  +GF AF+   D 
Sbjct: 65  SSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDI 124
Query: 177 DECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           DEC    G    C H C N +G + CSC  GY L  N   C E
Sbjct: 125 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167

>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19 (Map19) Length = 170

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
           G + +P  P  Y + +E  W  T  PG+R++L F  F+LE    C YD V +  G    +
Sbjct: 13  GRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSG----A 68
Query: 288 LTLGRFCG 295
             L   CG
Sbjct: 69  KVLATLCG 76

>pdb|2QQO|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-2 Length = 460

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLF--QSSC 116
           C       NGT+ SP FP+ Y  N  C + I+A P+  I L F  FD+E + L   +  C
Sbjct: 8   CSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDC 67
Query: 117 EYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDK 176
           +YD L ++  I       G +CG+K P  + S    L + FH+D +V K GFSA ++   
Sbjct: 68  KYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVH 127
Query: 177 DECMTN 182
            E + N
Sbjct: 128 QEPLEN 133

>pdb|2QQO|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-2 Length = 460

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELE--PHQT----C 272
           C    T+PNG I++P  P+ YP   +C +     P   I L F  F+LE  P Q     C
Sbjct: 8   CSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDC 67
Query: 273 AYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
            YD + ++DG       +G++CG K P  + + +  L + F +D +V + GF A +
Sbjct: 68  KYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARY 123

>pdb|2WNO|A Chain A, X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 149

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 54/106 (50%)
Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 278
           C    T P  + K+P  P+ Y   + C WH     G RI L F +F+LE    C  D+V 
Sbjct: 7   CGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVE 66
Query: 279 MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
           +YD        +GR+CG +LP  II+  N + + F SDASV   GF
Sbjct: 67  IYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGF 112

>pdb|2QQM|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-1 Length = 450

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQT------C 272
           C    T P+GVIK+P  P+ YP+  EC +         I L F+ F+LEP         C
Sbjct: 11  CSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFC 70
Query: 273 AYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
            YD + ++DG       +GR+CG K P  I + S  L M+F +D+++ ++GF A ++ 
Sbjct: 71  RYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSV 128

>pdb|1NZI|A Chain A, Crystal Structure Of The Cub1-Egf Interaction Domain Of Complement Protease C1s Length = 159

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
           G + SP++P  Y       W+I  P  Y I L FTH DIE       +C YD++ + S  
Sbjct: 6   GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE----LSENCAYDSVQIIS-- 59
Query: 128 GDSFKSQGVFCGSKL-----PPVILS---EGNALRIEFHSD--NSVQKSGFSAFFF-TDK 176
           GD+   +G  CG +       P++       N L++ F SD  N  + +GF+A++  TD 
Sbjct: 60  GDT--EEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDI 117
Query: 177 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           +EC    +  C H C N IG Y CSC   Y L ++  +C
Sbjct: 118 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 156

>pdb|1NZI|A Chain A, Crystal Structure Of The Cub1-Egf Interaction Domain Of Complement Protease C1s Length = 159

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
           G I +PN+P  YPS+ E  W      G+ I L F   ++E  + CAYD V +  GD+ + 
Sbjct: 6   GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEE- 64
Query: 288 LTLGRFCGIKL---PY-PII----TGSNQLYMMFKSDASVQRK--GFIATHTT 330
              GR CG +    P+ PI+       N+L ++FKSD S + +  GF A +  
Sbjct: 65  ---GRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 114

>pdb|3POB|A Chain A, Crystal Structure Of Masp-1 Cub2 Domain In Complex With The Collagen- Like Domain Of Mbl Length = 115

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELE--PHQTCAYDHVVMY 280
           T   G I +P++P+ YP   EC +      G  + L F++ F++E  P   C YD++ + 
Sbjct: 10  TQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIK 69
Query: 281 DGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
            G    S   G FCG K P PI T S+ + ++F+SD S + +G+
Sbjct: 70  AG----SKVWGPFCGEKSPEPISTQSHSIQILFRSDNSGENRGW 109

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAP 226
           T ++ C  NNGGC  +C+   G+  C+CH GY L E+G  C+       EG C    T  
Sbjct: 1   TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNS 60
Query: 227 NGVIKTPNHPDY--YPSKREC 245
            G  +      Y   P +R C
Sbjct: 61  EGAFQCWCEAGYELRPDRRSC 81

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	330
3dem_A	278	Complement factor MAsp-3; complement system, innat	1e-86
3dem_A	278	Complement factor MAsp-3; complement system, innat	1e-41
3dem_A	278	Complement factor MAsp-3; complement system, innat	2e-30
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	1e-81
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	1e-39
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	1e-27
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	7e-77
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	7e-52
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	1e-27
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	1e-73
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	7e-68
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	1e-67
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	3e-68
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	7e-39
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	3e-34
1szb_A	170	Mannose binding lectin-associated serine protease-	2e-46
1szb_A	170	Mannose binding lectin-associated serine protease-	9e-31
1szb_A	170	Mannose binding lectin-associated serine protease-	3e-04
1nzi_A	159	Complement C1S component; calcium, innate immunity	3e-44
1nzi_A	159	Complement C1S component; calcium, innate immunity	1e-33
1nzi_A	159	Complement C1S component; calcium, innate immunity	3e-07
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	3e-43
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	1e-41
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	1e-42
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	3e-37
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	2e-39
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	2e-38
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	5e-36
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	5e-35
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	3e-32
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	9e-30
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	5e-32
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	1e-29
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	7e-32
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	7e-31
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	7e-15
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	6e-11
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	8e-15
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	3e-11
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	1e-13
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	1e-11
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	3e-13
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	2e-10
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	7e-13
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	9e-12
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	8e-10
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	1e-09
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	1e-12
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	3e-11
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	5e-10
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	6e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-12
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	5e-11
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	8e-10
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	8e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-08
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-07
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	5e-07
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	3e-12
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-08
3v65_B	386	Low-density lipoprotein receptor-related protein;	5e-12
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-08
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-05
3v65_B	386	Low-density lipoprotein receptor-related protein;	8e-04
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	5e-12
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	7e-11
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	1e-10
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	8e-08
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	2e-11
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	4e-11
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-08
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	6e-08
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-11
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-09
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	7e-09
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-07
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	9e-05
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	3e-11
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	3e-09
2wph_E	59	Coagulation factor IXA light chain; serine proteas	3e-11
2wph_E	59	Coagulation factor IXA light chain; serine proteas	1e-10
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-10
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-07
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-07
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-06
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-05
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	7e-05
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	2e-08
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	2e-06
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	5e-04
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	9e-04
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	6e-08
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	3e-04
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	4e-04
2bou_A	143	EGF-like module containing mucin-like hormone rece	9e-08
2bou_A	143	EGF-like module containing mucin-like hormone rece	3e-07
2bou_A	143	EGF-like module containing mucin-like hormone rece	4e-07
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-04
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	1e-07
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-07
2vh0_B	134	Activated factor XA light chain; serine protease,	3e-04
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	4e-07
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	5e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	5e-07
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	3e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	3e-04
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	1e-06
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	1e-05
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	9e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-05
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	8e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-05
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	6e-05
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	5e-04
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	9e-05
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	3e-04
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	5e-04
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	5e-04

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278

 Score =  261 bits (667), Expect = 1e-86
 Identities = 88/284 (30%), Positives = 129/284 (45%), Gaps = 29/284 (10%)

Query: 63  LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLT 122
           L +  G + SP +PD Y  +    W I  P  +RI L F HF++E +      CEYD + 
Sbjct: 5   LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESS----YLCEYDYVK 60

Query: 123 VFSKIGDSFKSQGVFCGSKLPP--------VILSEGNALRIEFHSDNSVQKSGFSA---F 171
           V        +    FCG +           V+LS G+ + I F SD S ++        +
Sbjct: 61  VE----TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHY 116

Query: 172 FFTDKDECM---TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNG 228
              D DEC         C H C N IG Y CSC  GY L  +   C+        T   G
Sbjct: 117 MAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTG 176

Query: 229 VIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPHQ--TCAYDHVVMYDGDSP 285
           VI +P+ P+ YP   EC++      G  + L F++ F++E H    C YD++ +  G   
Sbjct: 177 VITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK- 235

Query: 286 DSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
               LG FCG K P PI T S+ + ++F SD S + +G+  ++ 
Sbjct: 236 ---VLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYR 276

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278

 Score =  145 bits (366), Expect = 1e-41
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 12/162 (7%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLT 71
            E   E+  C+H C N +GGY CSC+ GY LH+D + C       +    +     G +T
Sbjct: 125 KEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTC-----RVECSDNLFTQRTGVIT 179

Query: 72  SPSFPDLYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           SP FP+ Y K+  C++ I     + ++L F   FDIE +   +  C YD + +       
Sbjct: 180 SPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIK----VG 233

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
            K  G FCG K P  I ++ +++ I FHSDNS +  G+   +
Sbjct: 234 PKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSY 275

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278

 Score =  115 bits (290), Expect = 2e-30
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 221 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMY 280
            E+    G I++P +PD YPS  E  W+ T   G RIKL F  F LE    C YD+V + 
Sbjct: 3   VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 62

Query: 281 DGDSPDSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRKGF 324
             D   +   GR        P    +++  + + + F+SD S + +  
Sbjct: 63  TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFT 110

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286

 Score =  248 bits (634), Expect = 1e-81
 Identities = 87/278 (31%), Positives = 122/278 (43%), Gaps = 21/278 (7%)

Query: 66  SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
             G L SP FP+ Y  ++   W + APP +R+ L FTHF++E +      CEYD + + S
Sbjct: 7   VFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELS----YRCEYDFVKLTS 62

Query: 126 KIGDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQKSGFSAFFF---TDKDE 178
                    G                S G +L++ FHSD S +K       F    D DE
Sbjct: 63  GTKVLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDVDE 122

Query: 179 CMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNH 235
           C T+ G    C H C   +G Y CSC  GY L +N H C         T  +G + +P +
Sbjct: 123 CRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSALCSGQVFTGRSGFLSSPEY 182

Query: 236 PDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPHQ--TCAYDHVVMYDGDSPDSLTLGR 292
           P  YP    C ++     G  I L F E F++E H    C YD + +           G 
Sbjct: 183 PQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKR----EYGP 238

Query: 293 FCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           FCG  LP  I T SN++ + F +D S    G+   +T+
Sbjct: 239 FCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 276

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286

 Score =  140 bits (354), Expect = 1e-39
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)

Query: 11  FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
                 +   C+H C   LGGY CSC++GY LH +   C     +    G +    +G L
Sbjct: 123 CRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTC-----SALCSGQVFTGRSGFL 177

Query: 71  TSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGD 129
           +SP +P  Y K  +C + I     + I+L+F   FD+E +   ++ C YD+L +      
Sbjct: 178 SSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHP--EAQCPYDSLKIQ----T 231

Query: 130 SFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDEC 179
             +  G FCG  LPP I ++ N + I F +D S   +G+   + +     
Sbjct: 232 DKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTSTAQPH 281

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286

 Score =  108 bits (270), Expect = 1e-27
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 225 APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDS 284
              G + +P  P+ Y + ++  W  T  PG R++L F  F LE    C YD V +  G  
Sbjct: 6   PVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCEYDFVKLTSGTK 65

Query: 285 PDSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRKGF 324
             +   G+        P      +    L + F SD S ++   
Sbjct: 66  VLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFT 109

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score =  238 bits (609), Expect = 7e-77
 Identities = 91/285 (31%), Positives = 133/285 (46%), Gaps = 29/285 (10%)

Query: 63  LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLT 122
           L +  G + SP +PD Y  +    W I  P  +RI L F HF++E +      CEYD + 
Sbjct: 5   LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESS----YLCEYDYVK 60

Query: 123 VFSKIGDSFKSQGVFCGSKLPP--------VILSEGNALRIEFHSDNSVQK--SGFSAFF 172
           V        +    FCG +           V+LS G+ + I F SD S ++  +GF A +
Sbjct: 61  VE----TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHY 116

Query: 173 FT-DKDECM---TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNG 228
              D DEC         C H C N IG Y CSC  GY L  +   C+        T   G
Sbjct: 117 MAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTG 176

Query: 229 VIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPHQ--TCAYDHVVMYDGDSP 285
           VI +P+ P+ YP   EC++      G  + L F++ F++E H    C YD++ +  G   
Sbjct: 177 VITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK- 235

Query: 286 DSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
               LG FCG K P PI T S+ + ++F SD S + +G+  ++  
Sbjct: 236 ---VLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA 277

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score =  174 bits (442), Expect = 7e-52
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 38/246 (15%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLT 71
            E   E+  C+H C N +GGY CSC+ GY LH+D + C       +    +     G +T
Sbjct: 125 KEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTC-----RVECSDNLFTQRTGVIT 179

Query: 72  SPSFPDLYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDS 130
           SP FP+ Y K+  C++ I     + ++L F   FDIE +   +  C YD + +       
Sbjct: 180 SPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIK----VG 233

Query: 131 FKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHEC 190
            K  G FCG K P  I ++ +++ I FHSDNS +  G+   +    +EC         + 
Sbjct: 234 PKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRAAGNECPELQPPVHGKI 293

Query: 191 RNTIGSY------ICSCHNGYTLLENGHD--------------------CKEGGCKYEIT 224
             +   Y      + SC  GY +L++  +                    CK+     E  
Sbjct: 294 EPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLESE 353

Query: 225 APNGVI 230
             +  +
Sbjct: 354 LKSEQV 359

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score =  110 bits (275), Expect = 1e-27
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 221 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMY 280
            E+    G I++P +PD YPS  E  W+ T   G RIKL F  F LE    C YD+V + 
Sbjct: 3   VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 62

Query: 281 DGDSPDSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRKGF 324
             D   +   GR        P    +++  + + + F+SD S + +  
Sbjct: 63  TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFT 110

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score =  233 bits (596), Expect = 1e-73
 Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 43/279 (15%)

Query: 52  SVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL 111
           ++ A  AC        GT TSP+FP+ Y  N  CI+ I       I+++FT+F +E    
Sbjct: 110 AISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAI- 168

Query: 112 FQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAF 171
              +   D L +     +     G+F GS LPP I+S  N L ++F SD    +SGFSA+
Sbjct: 169 --GNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAY 226

Query: 172 FFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIK 231
                                                    D    GC   +T  +G   
Sbjct: 227 ----------------------------------------WDGSSTGCGGNLTTSSGTFI 246

Query: 232 TPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLG 291
           +PN+P  Y    EC W   ++ G   +L F++F LE H  C  D++ +YDG S +S  L 
Sbjct: 247 SPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLT 306

Query: 292 RFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           + CG + P  I +  + +++  ++D   Q +GF A +  
Sbjct: 307 QLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ 345

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score =  218 bits (557), Expect = 7e-68
 Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 50/270 (18%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CGG L  S+GT  SP++P  Y  +  C W + +       L F  F +E +     +C  
Sbjct: 234 CGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHH----PNCTL 289

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDE 178
           D L V+     +       CG + PP+I S G+++ I+  +D   Q  GF A +    + 
Sbjct: 290 DYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCEN 349

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDY 238
            +                                          +    G++++  +P+ 
Sbjct: 350 VV-----------------------------------------IVNQTYGILESIGYPNP 368

Query: 239 YPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKL 298
           Y   + C W    T G+ +   F  F+LE H  C+ D++ +YDG       +GR+CG+ L
Sbjct: 369 YSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPR----QMGRYCGVDL 424

Query: 299 PYPIITGSNQLYMMFKSDA-SVQRKGFIAT 327
           P P  T S++L ++  +D    + KGF   
Sbjct: 425 PPPGSTTSSKLQVLLLTDGVGRREKGFQMQ 454

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score =  218 bits (556), Expect = 1e-67
 Identities = 81/273 (29%), Positives = 111/273 (40%), Gaps = 45/273 (16%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CG IL  S GT+ SP  P++Y     C W I+  P + I L F  F +E +     +C  
Sbjct: 1   CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFH----YNCTN 56

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDE 178
           D L V+    DS  S G +CG  +PP + S GN+L + F +D+ +   GF   +      
Sbjct: 57  DYLEVYD--TDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAA 114

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDY 238
                                                   C  + T   G   +PN P+ 
Sbjct: 115 TA--------------------------------------CLQDYTDDLGTFTSPNFPNN 136

Query: 239 YPSKRECIWHFTTTPGHRIKLVFQEFELEPH-QTCAYDHVVMYDGDSPDSLTLGRFCGIK 297
           YP+  ECI+  T   G  I + F  F LE        D + + DG    S  LG F G  
Sbjct: 137 YPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSN 196

Query: 298 LPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           LP  II+ SN+L++ FKSD    R GF A    
Sbjct: 197 LPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDG 229

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579

 Score =  222 bits (568), Expect = 3e-68
 Identities = 76/279 (27%), Positives = 114/279 (40%), Gaps = 49/279 (17%)

Query: 58  ACGGILK-HSNGTLTSPSFPDLYIKNKTCIWEIVAP-PQYRISLNFTHFDIEGNNLFQSS 115
            CGG L     G +TSP +P  Y  ++ C W + AP P  +I LNF              
Sbjct: 5   PCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEK----HD 60

Query: 116 CEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
           C+YD + +     +S    G  CG+  PP I+S G+ L I+F SD + Q +GFS  +   
Sbjct: 61  CKYDFIEIRDGDSESADLLGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIF 120

Query: 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNH 235
           K                                          C    T+PNG I++P  
Sbjct: 121 KTG-------------------------------------SEDCSKNFTSPNGTIESPGF 143

Query: 236 PDYYPSKRECIWHFTTTPGHRIKLVFQEFELEP------HQTCAYDHVVMYDGDSPDSLT 289
           P+ YP   +C +     P   I L F  F+LE          C YD + ++DG       
Sbjct: 144 PEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPL 203

Query: 290 LGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 328
           +G++CG K P  + + +  L + F +D +V + GF A +
Sbjct: 204 IGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARY 242

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579

 Score =  143 bits (363), Expect = 7e-39
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 3/168 (1%)

Query: 54  KARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQ 113
              + C       NGT+ SP FP+ Y  N  C + I+A P+  I L F  FD+E + L  
Sbjct: 122 TGSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQV 181

Query: 114 SS--CEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAF 171
               C+YD L ++  I       G +CG+K P  + S    L + FH+D +V K GFSA 
Sbjct: 182 GEGDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSAR 241

Query: 172 FFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGC 219
           ++    E + N          +         +  +   +G    +   
Sbjct: 242 YYLVHQEPLENFQCNVPLGMESG-RIANEQISASSTYSDGRWTPQQSR 288

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579

 Score =  131 bits (330), Expect = 3e-34
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)

Query: 216 EGGCKYEITAPN-GVIKTPNHPDYYPSKRECIWHFT-TTPGHRIKLVFQEFELEPHQTCA 273
           +  C   + + + G I +P +P  YPS + C W      P  +I L F          C 
Sbjct: 3   DPPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHDCK 62

Query: 274 YDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           YD + + DGDS  +  LG+ CG   P  II+  + LY+ F SD + Q  GF   +  
Sbjct: 63  YDFIEIRDGDSESADLLGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEI 119

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score =  154 bits (390), Expect = 2e-46
 Identities = 56/170 (32%), Positives = 69/170 (40%), Gaps = 15/170 (8%)

Query: 58  ACGGILKH-SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSC 116
             G        G L SP FP  Y  ++   W + APP YR+ L FTHFD+E +      C
Sbjct: 2   PLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELS----HLC 57

Query: 117 EYDNLTVFSKIGDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQKSGFSAFF 172
           EYD + + S         G                S G++L I F SD S +K       
Sbjct: 58  EYDFVKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEA 117

Query: 173 F---TDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           F    D DEC    G    C H C N +G + CSC  GY L  N   C E
Sbjct: 118 FYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score =  113 bits (284), Expect = 9e-31
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 218 GCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDH 276
               +   P  G + +P  P  Y + +E  W  T  PG+R++L F  F+LE    C YD 
Sbjct: 2   PLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDF 61

Query: 277 VVMYDGDSPDSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRKGF 324
           V +  G    +   G+        P      +  + L + F+SD S ++   
Sbjct: 62  VKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFT 113

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 12  DECAL---EDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
           DEC +   E   C+H C N LGG+ CSC+ GY LH + + C
Sbjct: 125 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTC 165

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score =  148 bits (374), Expect = 3e-44
 Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 12/158 (7%)

Query: 66  SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
             G + SP++P  Y       W+I  P  Y I L FTH DIE +     +C YD++ + S
Sbjct: 4   MYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELS----ENCAYDSVQIIS 59

Query: 126 KIGDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQKSGFSA---FFFTDKDE 178
              +  +  G    +              N L++ F SD S ++        +  TD +E
Sbjct: 60  GDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINE 119

Query: 179 CM-TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           C    +  C H C N IG Y CSC   Y L ++  +C 
Sbjct: 120 CTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 157

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score =  120 bits (303), Expect = 1e-33
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 226 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSP 285
             G I +PN+P  YPS+ E  W      G+ I L F   ++E  + CAYD V +  GD+ 
Sbjct: 4   MYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTE 63

Query: 286 DSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRKGFIATHTT 330
           +    G+        P         N+L ++FKSD S + +        
Sbjct: 64  EGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYY 112

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 12  DECA-LEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
           +EC    D  C H C N +GGY CSC   Y LH D K C
Sbjct: 118 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 156

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Length = 149

 Score =  145 bits (367), Expect = 3e-43
 Identities = 40/113 (35%), Positives = 55/113 (48%)

Query: 218 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
            C    T P  + K+P  P+ Y   + C WH     G RI L F +F+LE    C  D+V
Sbjct: 6   ECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYV 65

Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
            +YD        +GR+CG +LP  II+  N + + F SDASV   GF   +  
Sbjct: 66  EIYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVA 118

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Length = 149

 Score =  140 bits (356), Expect = 1e-41
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 5/142 (3%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CGG+         SP FP+ Y  N+ C W I      RI L+F  FD+E +      C  
Sbjct: 7   CGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDD----PGCLA 62

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDE 178
           D + ++    D     G +CG +LP  I+S GN + ++F SD SV   GF    +   D 
Sbjct: 63  DYVEIYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQI-KYVAMDP 121

Query: 179 CMTNNGGCQHECRNTIGSYICS 200
              ++ G      +T      +
Sbjct: 122 VSKSSQGKNTSTTSTGNKNFLA 143

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Length = 450

 Score =  152 bits (384), Expect = 1e-42
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 7/124 (5%)

Query: 212 HDCKEG-GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ 270
           H  K G  C    T P+GVIK+P  P+ YP+  EC +         I L F+ F+LEP  
Sbjct: 3   HMFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDS 62

Query: 271 T------CAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGF 324
                  C YD + ++DG       +GR+CG K P  I + S  L M+F +D+++ ++GF
Sbjct: 63  NPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGF 122

Query: 325 IATH 328
            A +
Sbjct: 123 SANY 126

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Length = 450

 Score =  137 bits (346), Expect = 3e-37
 Identities = 40/189 (21%), Positives = 65/189 (34%), Gaps = 8/189 (4%)

Query: 54  KARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQ 113
           K    C       +G + SP FP+ Y  +  C + + AP    I L F  FD+E ++   
Sbjct: 6   KRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPP 65

Query: 114 SS--CEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAF 171
               C YD L ++    D     G +CG K P  I S    L + F++D+++ K GFSA 
Sbjct: 66  GGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSAN 125

Query: 172 FFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIK 231
           +   +     +    +     +   +                      +           
Sbjct: 126 YSVLQSSVSEDFKCMEALGMESGEIHSDQITASS------QYSTNWSAERSRLNYPENGW 179

Query: 232 TPNHPDYYP 240
           TP    Y  
Sbjct: 180 TPGEDSYRE 188

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Length = 460

 Score =  143 bits (362), Expect = 2e-39
 Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 7/188 (3%)

Query: 55  ARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGN--NLF 112
             + C       NGT+ SP FP+ Y  N  C + I+A P+  I L F  FD+E +   + 
Sbjct: 4   GSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVG 63

Query: 113 QSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
           +  C+YD L ++  I       G +CG+K P  + S    L + FH+D +V K GFSA +
Sbjct: 64  EGDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARY 123

Query: 173 FTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKT 232
           +    E + N          +        +   +      D +    +  +   +    T
Sbjct: 124 YLVHQEPLENFQCNVPLGMES----GRIANEQISASSTYSDGRWTPQQSRLHGDDNGW-T 178

Query: 233 PNHPDYYP 240
           PN      
Sbjct: 179 PNLDSNKE 186

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Length = 460

 Score =  140 bits (355), Expect = 2e-38
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 213 DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEP---- 268
           D     C    T+PNG I++P  P+ YP   +C +     P   I L F  F+LE     
Sbjct: 2   DPGSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQ 61

Query: 269 --HQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIA 326
                C YD + ++DG       +G++CG K P  + + +  L + F +D +V + GF A
Sbjct: 62  VGEGDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSA 121

Query: 327 THTT 330
            +  
Sbjct: 122 RYYL 125

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Length = 115

 Score =  125 bits (316), Expect = 5e-36
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 223 ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPHQ--TCAYDHVVM 279
            T   G I +P++P+ YP   EC +      G  + L F++ F++E H    C YD++ +
Sbjct: 9   FTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKI 68

Query: 280 YDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
             G        G FCG K P PI T S+ + ++F+SD S + +G+  ++ 
Sbjct: 69  KAGSK----VWGPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYR 114

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Length = 115

 Score =  122 bits (309), Expect = 5e-35
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)

Query: 59  CGG-ILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSC 116
           C G +     GT+TSP +P+ Y K+  C + I     + ++L F   FDIE +   +  C
Sbjct: 4   CSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDH--PEVPC 61

Query: 117 EYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
            YD + +        K  G FCG K P  I ++ ++++I F SDNS +  G+   +
Sbjct: 62  PYDYIKIK----AGSKVWGPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSY 113

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109

 Score =  115 bits (289), Expect = 3e-32
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 16/118 (13%)

Query: 58  ACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
           ACGG L    GT+ +   P        C+W +   P+Y++ ++    ++         C 
Sbjct: 5   ACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNLT--------CG 51

Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
            + + V      S KS G FC      ++    + + +++  D+    S +   F  D
Sbjct: 52  KEYVEVLEGAPGS-KSLGKFCEG--LSILNRGSSGMTVKYKRDSGHPASPYEIIFLRD 106

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109

 Score =  108 bits (272), Expect = 9e-30
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 218 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
            C   +T   G I T   P       EC+W     P +++ +      L     C  ++V
Sbjct: 5   ACGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTLNLT----CGKEYV 55

Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIAT 327
            + +G +P S +LG+FC       +  GS+ + + +K D+      +   
Sbjct: 56  EVLEG-APGSKSLGKFCE--GLSILNRGSSGMTVKYKRDSGHPASPYEII 102

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116

 Score =  115 bits (289), Expect = 5e-32
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 53  VKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLF 112
           +   D CG ++K ++G++++            C W I+  P  ++ +   + ++      
Sbjct: 3   INGPDECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLA----- 52

Query: 113 QSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
              C  + + VF  +     S G  C      V LS  N + I+++  +    S F  +F
Sbjct: 53  ---CGKEYVEVFDGLLSG-PSYGKLCAG-AAIVFLSTANTMTIKYNRISGNSSSPFLIYF 107

Query: 173 FTD 175
           +  
Sbjct: 108 YGS 110

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116

 Score =  108 bits (272), Expect = 1e-29
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 11/113 (9%)

Query: 218 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
            C   I   +G I   +          C W     P  ++++      L     C  ++V
Sbjct: 8   ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLA----CGKEYV 58

Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
            ++DG      + G+ C        ++ +N + + +   +      F+     
Sbjct: 59  EVFDG-LLSGPSYGKLCA-GAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYG 109

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114

 Score =  114 bits (287), Expect = 7e-32
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 215 KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAY 274
           +   C   +   +GVI T      Y  K  C+W     P + +++  Q  +L     C  
Sbjct: 6   RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLN----CNK 56

Query: 275 DHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           + + + DG  P S  LG+ C   L     +  + + + +  +       +   +  
Sbjct: 57  ESLEIIDG-LPGSPVLGKICEGSLM-DYRSSGSIMTVKYIREPEHPASFYEVLYFQ 110

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114

 Score =  111 bits (280), Expect = 7e-31
 Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 15/117 (12%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CGGILK  +G + +      Y     C+W I  PP+Y + ++  +  +         C  
Sbjct: 10  CGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLN--------CNK 56

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
           ++L +   +  S    G  C   L     S G+ + +++  +     S +   +F D
Sbjct: 57  ESLEIIDGLPGS-PVLGKICEGSLMD-YRSSGSIMTVKYIREPEHPASFYEVLYFQD 111

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 67.1 bits (164), Expect = 7e-15
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)

Query: 175 DKDECMTNNGG--------CQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           D DEC + +          CQH C N +G Y CSC  GY L E+ H C+
Sbjct: 3   DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 55.9 bits (135), Expect = 6e-11
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 8/46 (17%)

Query: 12 DECALEDHG--------CEHTCKNILGGYECSCKIGYELHSDGKIC 49
          DECA             C+H C N +GGY CSC+ GYEL  D   C
Sbjct: 5  DECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 67.0 bits (164), Expect = 8e-15
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           +  C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 1   RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 57.0 bits (138), Expect = 3e-11
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGI 62
            C+L++  C+  C        CSC  GY L  +GK C+ +      CG  
Sbjct: 2  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY--PCGKQ 50

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           C  +NGGC   CR       CSC +GY L ++   C
Sbjct: 1   CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSC 36

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILK 64
          C+L++ GC+  C+       CSC  GY L  D K CV + +    CG   +
Sbjct: 1  CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF--PCGKFTQ 49

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Length = 69

 Score = 62.9 bits (153), Expect = 3e-13
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 175 DKDECMTNNGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 216
           D+  C+  NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 4   DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Length = 69

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 11 FDECALEDHGCEHTCKNILGG-YECSCKIGYELHSDGKICVGSVKARDACGGI 62
             C  E+ GCE  C +  G    C C  GY L +DG  C  +V+    CG I
Sbjct: 5  QLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE--YPCGKI 55

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 63.1 bits (154), Expect = 7e-13
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 165 KSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 212
                       +EC+ NNGGC + C +    Y C C +G+ L+    
Sbjct: 18  TENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRR 65

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 60.0 bits (146), Expect = 9e-12
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
            D DEC  +   C   C N  G Y C C  G+ L  +   CK
Sbjct: 67  EDIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 54.6 bits (132), Expect = 8e-10
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGK 47
          +EC   + GC + C ++  GYEC C  G++L +  +
Sbjct: 30 NECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRR 65

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
           DEC  +   C   C N+ GGY+C C+ G++L    K C
Sbjct: 70  DECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 175 DKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDC 214
           D DEC      C    C+N  G + C C  GY        C
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSC 42

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 12 DECALEDHGC-EHTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC+L+   C    CKNI G +EC C  GY  +   K C 
Sbjct: 4  DECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE 43

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSC--HNGYTLLENGHDCK 215
            D DEC  N   C   C N  G Y C C    G+ L ++   C+
Sbjct: 43  EDIDECSENM--CAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE 84

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKI--GYELHSDGKICV 50
          DEC+  ++ C   C N  GGY C C    G++L  D K C 
Sbjct: 46 DECS--ENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE 84

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           TD +EC+         C NT GSYIC C   + L      C
Sbjct: 1   TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 174 TDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC    G CQ  +C NT GS+ C C  GY L E+   C
Sbjct: 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 55.8 bits (135), Expect = 8e-10
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          +EC          C N  G Y C C   +EL+     CV
Sbjct: 4  NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV 42

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 53.1 bits (128), Expect = 8e-09
 Identities = 2/41 (4%), Positives = 7/41 (17%)

Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
              +              +    +C    G+         +
Sbjct: 80  SLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 12  DECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 49
           DEC      C+   C N  G ++C C  GY L+ D ++C
Sbjct: 123 DECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 9/46 (19%), Positives = 11/46 (23%), Gaps = 3/46 (6%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGC 219
            D       N       R   G   CS   G  + +    C  G  
Sbjct: 42  VDTRSG---NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 3/39 (7%), Positives = 6/39 (15%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
            +                    C    G+  +    I  
Sbjct: 82  GKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 6/38 (15%), Positives = 10/38 (26%), Gaps = 3/38 (7%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
                    +   +   G   CS +IG  +      C
Sbjct: 45 RSGN---CYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
                C  +NGGC H C   +G   CSC  GY L ++   C  
Sbjct: 52  VSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 11  FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSN 67
           F  C+L++ GC H C   +G   CSC  GY+L  D   C  +VK    CG   K   
Sbjct: 54  FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK--FPCGRPWKRME 108

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 65.2 bits (158), Expect = 5e-12
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           T ++ C  NNGGC  +C+   G+  C+CH GY L E+G  C++
Sbjct: 1   TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQD 43

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 54.4 bits (130), Expect = 2e-08
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          + C + + GC   C+ I G  +C+C  GY L  DG+ C
Sbjct: 4  ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC 41

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 171 FFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
                K+ C  NNGGC H C  +  +Y C+C  G+    N H C +
Sbjct: 342 RQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAQ 386

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 39.8 bits (92), Expect = 8e-04
 Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 10  KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
             + C   + GC H C      Y C+C  G+    +   C 
Sbjct: 346 GKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRK-INSHACA 385

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 60.0 bits (146), Expect = 5e-12
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 174 TDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC  +   C+   C NT GSY C C  G+ L  N   C
Sbjct: 44  MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 56.9 bits (138), Expect = 7e-11
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 174 TDKDECMTNNGGC-QHECRNTIGSYICSCHNGYTL-LENGHDC 214
           TD DEC  +   C + +C NT G + C C  GY        +C
Sbjct: 1   TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 12 DECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC  +   C    C N  G Y C C  G++L  +   C+
Sbjct: 47 DECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYEL-HSDGKICV 50
          DEC +    C    C N  G +EC C  GYE      K C+
Sbjct: 4  DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 212
            D DEC   N      C+N IG + C+C  G+       
Sbjct: 42  VDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMT 80

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC   +     +C NT GSY C C  GY L   G++C
Sbjct: 3   VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          DEC++ +     TCKN++GG+EC+C+ G+E       C
Sbjct: 45 DECSVGNPCGNGTCKNVIGGFECTCEEGFEP-GPMMTC 81

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC   D      C N  G Y C C  GY L   G  CV
Sbjct: 6  DECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECV 42

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 174 TDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC    G C++  C NT GS+ C C +G TL   G  C
Sbjct: 105 EDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           D DEC  ++      C+N+ GS+IC C +  TL      C
Sbjct: 3   DIDEC-ESSPCINGVCKNSPGSFICECSSESTLDPTKTIC 41

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 52.7 bits (127), Expect = 7e-09
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 12  DECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICV 50
           DEC +    C++  C N  G ++C C  G  L + G+IC+
Sbjct: 108 DECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 12/39 (30%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC          CKN  G + C C     L     IC+
Sbjct: 5  DECE-SSPCINGVCKNSPGSFICECSSESTLDPTKTICI 42

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 172 FFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
             T K +C  ++ G       T+      C  GY+    G  C
Sbjct: 64  GATLKSQC-CSSLGAAWGSPCTLCQVDPICGKGYS-RIKGTQC 104

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* Length = 53

 Score = 57.0 bits (138), Expect = 3e-11
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 179 CMTNNGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 216
           C+  NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 2   CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* Length = 53

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 14 CALEDHGCEHTCKNILGG-YECSCKIGYELHSDGKICVGSVKARDACGGI 62
          C  E+ GCE  C +  G    C C  GY L +DG  C  +V+    CG I
Sbjct: 2  CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY--PCGKI 49

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* Length = 59

 Score = 57.1 bits (138), Expect = 3e-11
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDC 214
           C   NG C+  C+N+     +CSC  GY L EN   C
Sbjct: 2   CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSC 38

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* Length = 59

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 14 CALEDHGCEHTCKNILGG-YECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLT 71
          C +++  CE  CKN       CSC  GY L  + K C  +V     CG +       LT
Sbjct: 2  CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF--PCGRVSVSQTSKLT 58

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 214
           TD DEC  N G C   C N  G++ C C     L  + G DC
Sbjct: 78  TDIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 175 DKDECMTNNGGCQHECRN-TIGSYICSCHNGYTLLENGHDC 214
             D C      C+++C+     SY+C C  G+  + +    
Sbjct: 3   PVDPC--FRANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHR 41

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELH-SDGKIC 49
           DEC      C   C N+ G +EC C     L    G  C
Sbjct: 81  DECE-NGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)

Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
            + +   N   C  +C        C C  GY  L++G  C
Sbjct: 40  HRCQMFCNQTACPADCDPN-TQASCECPEGYI-LDDGFIC 77

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 3/39 (7%)

Query: 12 DECALEDHGCEHTCKNI-LGGYECSCKIGYELHSDGKIC 49
          D C      CE+ C+ +    Y C C  G+         
Sbjct: 5  DPCF--RANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHR 41

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 11/39 (28%), Positives = 12/39 (30%), Gaps = 2/39 (5%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
           +       C   C        C C  GY L  DG IC 
Sbjct: 42 CQMFCNQTACPADCDP-NTQASCECPEGYIL-DDGFICT 78

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 54.1 bits (129), Expect = 2e-08
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 212
           +EC+ NNGGC H C +    Y C C +G+ L+    
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRR 36

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          +EC   + GC H C ++  GYEC C  G++L +  +  
Sbjct: 1  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE 38

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 6/43 (13%)

Query: 178 ECMTNNGGCQHECRNT------IGSYICSCHNGYTLLENGHDC 214
               +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 354 RTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 396

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 39.8 bits (92), Expect = 9e-04
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
           DEC  +   C   C N+ GGY+C C+ G++L    K C
Sbjct: 40 IDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 77

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
             C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
             C+L++  C+  C        CSC  GY L  +GK C
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 119

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 206
            D D+C T+    Q +C++ +G Y C+C  G+ 
Sbjct: 40  KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE 72

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 49.8 bits (119), Expect = 9e-08
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 174 TDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC +    C     C NT+GSY C C  G+       + 
Sbjct: 94  QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNN 136

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 12  DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50
           DEC+   H C+    C N +G Y C C+ G++         
Sbjct: 97  DECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ 137

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 174 TDKDECMTNNGGC---QHECRNTIGSYICSCHNGYTLLENGHDCKEG 217
            D +EC T +        +C NT GSY C C  GY  +      K  
Sbjct: 42  DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNE 88

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 3/43 (6%)

Query: 12 DECALEDHGC---EHTCKNILGGYECSCKIGYELHSDGKICVG 51
          +ECA            C N  G Y+C C  GYE  S  K    
Sbjct: 45 NECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN 87

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 174 TDKDECMTN---NGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 216
           T KD+ +     NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 83  THKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
             C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
             C+L++  C+  C        CSC  GY L  +GK C
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 119

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 176 KDECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           K+EC      GCQH C     SY CSC  GY L E+   C 
Sbjct: 2   KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCV 42

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 12 DECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTL 70
          +EC  E   GC+H C      Y CSC  GY L  D K C       D C   +  S    
Sbjct: 3  NECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQC----VPHDQCACGVLTSEKRA 58

Query: 71 TSP-SFP 76
                P
Sbjct: 59 PDLQDLP 65

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 49.9 bits (118), Expect = 5e-07
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHP 236
           +EC    G C   C N+ G++ C C  GY L  +   CK  G +  +   N +      P
Sbjct: 2   NEC-AEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLP 60

Query: 237 DYY 239
              
Sbjct: 61  HRS 63

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 44.1 bits (103), Expect = 3e-05
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          +ECA E+  C   C N  G ++C C+ GYEL  D + C
Sbjct: 2  NECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSC 38

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           C  NNGGC H C  +  +Y C+C  G+  + N H C  
Sbjct: 307 CGDNNGGCTHLCLPSGQNYTCACPTGFRKI-NSHACAL 343

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           C   NGGC H C        C+C  G+ L+ +   C
Sbjct: 581 CAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTC 616

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 46.0 bits (108), Expect = 1e-05
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 14  CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
           CA E+ GC H C     G  C+C IG+EL SD K C+
Sbjct: 581 CAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI 617

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 43.9 bits (104), Expect = 9e-06
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 174 TDKDECMTNNGGCQHECRNT-IGSYICSCHNGYTLLENGHDCKE 216
            D       NG C+  C+       +CSC  GY L  +   CK 
Sbjct: 84  LDATCN-IKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKP 126

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 44.3 bits (103), Expect = 1e-05
 Identities = 24/205 (11%), Positives = 41/205 (20%), Gaps = 32/205 (15%)

Query: 12  DECALEDHGC--EHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
           +  A+             +   + C C  G         C    +      G      G 
Sbjct: 3   EASAVTVDTICXNGQLVQMSNHFXCMCNEGLVH-LSENTCEEXNECXXETLGXACGEFGQ 61

Query: 70  LTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 129
                  +     +  ++       Y                         L   + + D
Sbjct: 62  CI-----ENPDPAQVNMYXCGCIEGYT------------------------LXEDTCVLD 92

Query: 130 SFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHE 189
             +        +     LSE  +                     T +  C          
Sbjct: 93  VCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEV 152

Query: 190 CRNTIGSYICSCHNGYTLLENGHDC 214
           C N  G Y C C  G+T     + C
Sbjct: 153 CXNVEGVYXCQCMEGFTFDXEXNVC 177

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 38.9 bits (89), Expect = 8e-04
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 12  DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51
             C L  +     C N+ G Y C C  G+    +  +C+G
Sbjct: 140 TACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLG 179

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 174 TDKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGC 219
             K+EC      GCQH C     SY CSC  GY L E+   C     
Sbjct: 41  LAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 87

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 43.2 bits (101), Expect = 6e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 4/63 (6%)

Query: 12 DECALEDHGC--EHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGT 69
            CA   H C     C++   G+ C C   Y    +G+ CV     +   G +       
Sbjct: 6  QTCANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCVAEGSPQRVNGKVKGRIFVG 63

Query: 70 LTS 72
           + 
Sbjct: 64 SSQ 66

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 4/44 (9%)

Query: 175 DKDECMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDCKE 216
            +  C  N   C    ECR+    + C C   YT   NG  C  
Sbjct: 4   AQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA 45

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 42.8 bits (100), Expect = 9e-05
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 179 CMTNNGGCQHEC--RNTIGSYICSCHNGYTLLENGHDCKEG 217
           C  +NGGC H C        Y C+C  G  LLENG  CK+G
Sbjct: 270 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Length = 316

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 177 DECMTNNGGCQHECRNT------IGSYICSCHNGYTLLENGHDC 214
           +    +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 271 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 314

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 11/39 (28%), Positives = 12/39 (30%), Gaps = 6/39 (15%)

Query: 174 TDKDECMTNNGGCQ-----HECRNTIGSYIC-SCHNGYT 206
            D DEC      C        C NT   + C  C   Y 
Sbjct: 42  EDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR 80

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score = 40.9 bits (95), Expect = 5e-04
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 179 CMTNNGGCQHECRNT-IGSYICSCHNGYTLLENGHDCKE 216
           C  +NGGC H C     G+  CSC     LL++   C  
Sbjct: 582 CAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGG 620

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	330
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	100.0
3dem_A	278	Complement factor MAsp-3; complement system, innat	100.0
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	100.0
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	100.0
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	100.0
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	100.0
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	100.0
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	99.97
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	99.96
1szb_A	170	Mannose binding lectin-associated serine protease-	99.95
1nzi_A	159	Complement C1S component; calcium, innate immunity	99.95
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	99.94
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	99.94
1nzi_A	159	Complement C1S component; calcium, innate immunity	99.94
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	99.94
1szb_A	170	Mannose binding lectin-associated serine protease-	99.94
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	99.94
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	99.93
3dem_A	278	Complement factor MAsp-3; complement system, innat	99.93
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	99.93
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.92
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	99.9
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	99.9
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.88
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	99.81
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.79
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	99.74
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	99.74
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	99.73
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	99.71
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.61
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.55
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.53
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.52
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.51
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.48
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.46
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.44
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.42
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.41
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.39
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.34
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.34
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.32
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	99.26
2vh0_B	134	Activated factor XA light chain; serine protease,	99.25
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	99.22
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.21
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	99.19
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.14
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.11
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.05
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.03
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	99.01
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.98
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.95
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.95
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.9
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.87
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.86
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.8
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.79
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.77
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.73
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.72
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.67
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.63
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.6
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.52
2vh0_B	134	Activated factor XA light chain; serine protease,	98.51
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.5
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.5
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.49
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.49
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.47
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.46
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.45
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.42
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	98.4
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.37
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.36
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.28
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.18
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.17
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	98.17
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.13
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.11
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.07
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.04
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.03
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.02
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.0
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.82
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.81
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.8
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.8
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	97.72
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.69
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.67
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.57
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.54
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.52
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.51
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	97.51
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.47
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.46
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.43
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.43
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.29
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.25
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.09
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.9
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.89
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.83
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.81
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.74
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.61
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.6
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.58
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.49
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	96.29
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.21
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.11
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.34
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	95.27
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.96
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.96
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	94.46
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.09
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	93.96
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	93.44
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.34
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	92.89
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	92.55
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.27
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	91.83
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	90.84
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.69
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	90.6
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	90.54
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.37
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	90.33
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	89.07
1ob1_C	99	Major merozoite surface protein; immune system, im	87.66
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	86.79
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	86.57
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	82.02
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	81.87
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	81.15
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	80.87

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=100.00  E-value=4.3e-52  Score=345.78  Aligned_cols=255  Identities=36%  Similarity=0.722  Sum_probs=224.1

Q ss_pred             eecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCC-
Q psy8443          63 LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSK-  141 (330)
Q Consensus        63 ~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~-  141 (330)
                      +....|.|.||+||..|+++..|.|.|.+++|++|+|.|..|+|+...    .|..|+|+|+++.    ..++++||.. 
T Consensus         4 l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~----~~~~~~CG~~~   75 (286)
T 1nt0_A            4 PEPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSY----RCEYDFVKLTSGT----KVLATLCGQES   75 (286)
T ss_dssp             -CCCEEEEECTTTTSCCCSSCCEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEETT----EEEEEECSSSC
T ss_pred             ccCCCceEeCCCCCccCcCCCcEEEEEEcCCCCEEEEEEEEEEecCCC----CCCCcEEEEECCC----eEeceECCCcC
Confidence            456789999999999999999999999999999999999999999765    7999999999984    4678999986 


Q ss_pred             -----CC--CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCCC---cccccccccCCceeeeccCCeEEc
Q psy8443         142 -----LP--PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLL  208 (330)
Q Consensus       142 -----~~--~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~  208 (330)
                           .|  ..+.+.++.|++.|.++.....  .||.+.|.+ +.++|...+.   .|.+.|.|+.|+|.|.|.+||.|.
T Consensus        76 ~~~~~~P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~  155 (286)
T 1nt0_A           76 TDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILH  155 (286)
T ss_dssp             CSSCBCCTTCEEECSSSEEEEEEECCC----CCCEEEEEEEEEECCTTC-------CCSSEEEEETTEEEEECCTTEEEC
T ss_pred             CCcccCCCCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEeccCCccCCCCCCcccCCCccccccCceEeecCCCceec
Confidence                 46  6889999999999999988765  999999976 6788875433   588999999999999999999999


Q ss_pred             cCCCCcccCCCcce-eecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEE-EEeeCCC--CCCCCceEEEEcCCC
Q psy8443         209 ENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ-EFELEPH--QTCAYDHVVMYDGDS  284 (330)
Q Consensus       209 ~~~~~C~~~~C~~~-~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~-~~~l~~~--~~C~~d~l~i~~g~~  284 (330)
                      .+++.|. ..|++. ++...|.|.||+||..||++++|.|+|+++++++|+|+|. .|+||..  ..|.+|+|+||||. 
T Consensus       156 ~d~~~C~-~~Cg~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~-  233 (286)
T 1nt0_A          156 QNKHTCS-ALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK-  233 (286)
T ss_dssp             TTSSCEE-ECCEEEEECSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC----C--CEEEEECSS-
T ss_pred             cCCCCcc-ccccCceecCCceEEeCCCCCCCCCCCCEEEEEEECCCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCC-
Confidence            9999997 679887 8899999999999999999999999999999999999996 8999975  57999999999983 


Q ss_pred             CCccceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         285 PDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       285 ~~~~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                         .++++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus       234 ---~~~~~~CG~~~p~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~  276 (286)
T 1nt0_A          234 ---REYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS  276 (286)
T ss_dssp             ---CEEEEECBSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred             ---cceEEEcCCCCCCCEEeeCCEEEEEEEeCCCCCCCCEEEEEEE
Confidence               5789999999999999999999999999999999999999974

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.6e-51  Score=339.74  Aligned_cols=257  Identities=36%  Similarity=0.739  Sum_probs=229.2

Q ss_pred             CeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCC
Q psy8443          61 GILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGS  140 (330)
Q Consensus        61 ~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~  140 (330)
                      ..+....|.|.||+||..|+++..|.|.|.++++++|+|.|..|+|+...    .|.+|+|+|+++.    ..++++||.
T Consensus         3 ~~lt~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~v~dg~----~~~~~~CG~   74 (278)
T 3dem_A            3 VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETED----QVLATFCGR   74 (278)
T ss_dssp             ----CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSS----CEEEEECSB
T ss_pred             ceeccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCC----CCCCcEEEEecCC----cccceEcCC
Confidence            34567889999999999999999999999999999999999999999865    7999999999974    357899997


Q ss_pred             CCC--------CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCC---CcccccccccCCceeeeccCCeE
Q psy8443         141 KLP--------PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNN---GGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       141 ~~~--------~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~---~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      ..+        ..+.|.++.|++.|.++.....  .||.+.|.+ +.++|....   ..|.+.|.|..|++.|.|++||.
T Consensus        75 ~~~~~~~~~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~  154 (278)
T 3dem_A           75 ETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYI  154 (278)
T ss_dssp             SSSSSSCCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCTTTC-----CCCSSEEEEETTEEEEECCTTCE
T ss_pred             cCCCcccCCCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccccCCCCCCCcccCCcCcCCccCCcEEEeCCcce
Confidence            643        5789999999999999987764  799999975 788887653   37888899999999999999999


Q ss_pred             EccCCCCcccCCCcce-eecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEE-EeeCCC--CCCCCceEEEEcC
Q psy8443         207 LLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPH--QTCAYDHVVMYDG  282 (330)
Q Consensus       207 l~~~~~~C~~~~C~~~-~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~-~~l~~~--~~C~~d~l~i~~g  282 (330)
                      ++.+.+.|. ..|++. ++...|.|.||+||..||++.+|.|+|+++++++|.|+|.+ |+||..  ..|.+|+|+||||
T Consensus       155 l~~d~~~C~-~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg  233 (278)
T 3dem_A          155 LHTDNRTCR-VECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVG  233 (278)
T ss_dssp             ECTTSSCEE-CCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEECCTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEET
T ss_pred             eccCCCCCc-ccCCCceecCCccceeCCCCCCCCCCcCeEEEEEEeCCCcEEEEEEccccccccCCCCCCCCCEEEEecC
Confidence            999999998 678764 58899999999999999999999999999999999999997 999974  4799999999998


Q ss_pred             CCCCccceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         283 DSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       283 ~~~~~~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      .    .++++|||...|..++|++|.|+|+|+||.+..++||+|+|+|
T Consensus       234 ~----~~~~~~CG~~~p~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~  277 (278)
T 3dem_A          234 P----KVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA  277 (278)
T ss_dssp             T----EEEEEECBSSCCCCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred             C----cccccccCCCCCCCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence            4    4689999999999999999999999999999999999999986

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=100.00  E-value=2.1e-47  Score=328.78  Aligned_cols=260  Identities=34%  Similarity=0.668  Sum_probs=227.8

Q ss_pred             eecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCC
Q psy8443          63 LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKL  142 (330)
Q Consensus        63 ~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~  142 (330)
                      ++...|.|.||+||..|++++.|.|.|++++|++|+|.|..|+||...    .|.+|+|+|+++........++.+....
T Consensus         5 lt~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~----~C~~D~l~i~dg~~~~~~~cG~~~~~~~   80 (361)
T 4aqb_A            5 LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETEDQVLATFCGRETTDTE   80 (361)
T ss_dssp             EESSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSSCEEEEECSBSSSSSS
T ss_pred             EeCCeEEEeCCCCCCCCCCCCeEEEEEEECCCCEEEEEEeEEEecCCC----CCCceEEEEccCCcccceeeccccCCCc
Confidence            567789999999999999999999999999999999999999999865    7999999999985433333333333221


Q ss_pred             ----CCcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccC---CCcccccccccCCceeeeccCCeEEccCCC
Q psy8443         143 ----PPVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGH  212 (330)
Q Consensus       143 ----~~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~---~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~  212 (330)
                          +..+.|.++.|+++|++|.....  .||.+.|.+ +.++|...   ...|.+.|.+..|+|.|.|..||.+..+..
T Consensus        81 ~~~~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~  160 (361)
T 4aqb_A           81 QTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNR  160 (361)
T ss_dssp             CCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSS
T ss_pred             cCCCccceeccCCEeEEEEEeCCcccccccccccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEecccc
Confidence                23589999999999999988766  499999965 66777643   456788899999999999999999999999


Q ss_pred             CcccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEE-EeeCCC--CCCCCceEEEEcCCCCCccc
Q psy8443         213 DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPH--QTCAYDHVVMYDGDSPDSLT  289 (330)
Q Consensus       213 ~C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~-~~l~~~--~~C~~d~l~i~~g~~~~~~~  289 (330)
                      .|....|+..++..+|.|.||+||..||++.+|.|+|+++++++|.|+|.+ |+++..  ..|.+|+|+|+||.    .+
T Consensus       161 ~~~~~~c~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~----~~  236 (361)
T 4aqb_A          161 TCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGP----KV  236 (361)
T ss_dssp             CEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEECCTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETT----EE
T ss_pred             ccccccccceEeCCCcEEecCCCCCCCCCCceeeEEeeeccCcEEEEEEeecccccCCccCccCCCeEEEeeCC----ee
Confidence            999999999999999999999999999999999999999999999999987 677663  46999999999984    57


Q ss_pred             eeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         290 LGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       290 ~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      +++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus       237 ~~~~cG~~~p~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~  277 (361)
T 4aqb_A          237 LGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA  277 (361)
T ss_dssp             EEEECBSSCCCCEECSCSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred             EEeeCCCCCCCCEeecCCeEEEEEEeCCCCCccceEEEEEE
Confidence            89999999999999999999999999999999999999975

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=100.00  E-value=4.5e-45  Score=330.01  Aligned_cols=231  Identities=37%  Similarity=0.681  Sum_probs=210.7

Q ss_pred             cCCCCeeec-CCceEeCCCCCCCCCCCCCcEEEEEcCCC-CEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCccc
Q psy8443          57 DACGGILKH-SNGTLTSPSFPDLYIKNKTCIWEIVAPPQ-YRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKS  133 (330)
Q Consensus        57 ~~C~~~~~~-~~g~~~sp~~p~~~~~~~~C~~~i~~~~g-~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~  133 (330)
                      +.||+.+.. ..|.|.||+||..|+++..|.|.|++|.+ .+|.|.|. .|+++..     .|.+|+|+|++|.......
T Consensus         7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~~-----~C~~Dyl~I~dG~~~~~~~   81 (577)
T 4gz9_A            7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLEDR-----DCKYDYVEVIDGENEGGRL   81 (577)
T ss_dssp             CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCCG-----GGTSSEEEEEESSSTTSEE
T ss_pred             CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecCC-----CCCccEEEEEeCCCCCCcE
Confidence            569998864 56999999999999999999999999866 68999996 7898854     6999999999998888888


Q ss_pred             ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCC
Q psy8443         134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD  213 (330)
Q Consensus       134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~  213 (330)
                      ++++||...|..+.|.++.|+++|.++.....+||.+.|.....                                    
T Consensus        82 lg~~CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~------------------------------------  125 (577)
T 4gz9_A           82 WGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKR------------------------------------  125 (577)
T ss_dssp             EEEECSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCC------------------------------------
T ss_pred             EEEecCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeec------------------------------------
Confidence            99999999999999999999999999999999999999865211                                    


Q ss_pred             cccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCC------CCCCceEEEEcCCCCCc
Q psy8443         214 CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYDGDSPDS  287 (330)
Q Consensus       214 C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~------~C~~d~l~i~~g~~~~~  287 (330)
                        ...|+..++...|.|.||+||..||++++|.|+|.++++++|.|+|.+|+||...      .|.+|||+||||....+
T Consensus       126 --~~~C~~~~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~  203 (577)
T 4gz9_A          126 --GPECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVG  203 (577)
T ss_dssp             --CCEEEEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTTS
T ss_pred             --CcccceeecCCCccccCCCCCCCCCCCceEEEEEEECCCCEEEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCCC
Confidence              1347788899999999999999999999999999999999999999999999754      39999999999998889


Q ss_pred             cceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       288 ~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ++|++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus       204 ~~lg~~CG~~~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~  246 (577)
T 4gz9_A          204 PHIGRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSV  246 (577)
T ss_dssp             CEEEEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             ceeEEEeCCCCCCCcceeCCEEEEEEEECCCCCCceEEEEEEE
Confidence            9999999999999999999999999999999999999999985

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=100.00  E-value=4.2e-43  Score=310.90  Aligned_cols=231  Identities=32%  Similarity=0.582  Sum_probs=215.8

Q ss_pred             cCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443          57 DACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV  136 (330)
Q Consensus        57 ~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~  136 (330)
                      ..|++.+....|.|.||+||..|+++..|.|.|.++++.+|.|.|..|+|+...   ..|..|+++|+++.......+++
T Consensus       115 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~~f~le~~~---~~C~~D~l~i~dg~~~~s~~~~~  191 (457)
T 3kq4_B          115 TACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAI---GNYYTDFLEIRDGGYEKSPLLGI  191 (457)
T ss_dssp             SCEEEEECSSCCCEECTTTTSCCCSSCEEEEEECCCSSCCCEEEEEEEECCCCB---TTBCSSEEEEESSSSTTSCEEEE
T ss_pred             ccccceeecCcEEECCCCCCCcCCCCceEEEEEEeCCCCEEEEEEEEEEeecCC---CCcccceEEEecCCCCCcceeee
Confidence            469999999999999999999999999999999999999999999999998753   27889999999998887888999


Q ss_pred             cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +||...|..+.+.++.+++.|+++.....+||.+.|...                                        .
T Consensus       192 ~cG~~~p~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~----------------------------------------~  231 (457)
T 3kq4_B          192 FYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGS----------------------------------------S  231 (457)
T ss_dssp             ECSSSCCCCEECSSSCEEEEEECCSSCCCCEEEEEEECC----------------------------------------C
T ss_pred             ecCCCCCCCeEEcCCEEEEEEEeCCCCCcCCEEEEeccc----------------------------------------c
Confidence            999999999999999999999999999999999998642                                        1


Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++.+.|.|.||+||..||++++|.|+|.++++++|+|+|.+|+||....|.+|+|+||||....+.+|+++||.
T Consensus       232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~l~~~CG~  311 (457)
T 3kq4_B          232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGD  311 (457)
T ss_dssp             CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCTTCCSSEEEEEESSSTTSEEEEEECSS
T ss_pred             CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCCCcCCCEEEEEeCCCCCchhhhhhcCC
Confidence            45777888899999999999999999999999999999999999999999999999999999999998888999999999


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ..|..++|++|.|+|+|++|.+..++||+|+|++
T Consensus       312 ~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~  345 (457)
T 3kq4_B          312 EKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ  345 (457)
T ss_dssp             CCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEE
T ss_pred             cCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEe
Confidence            9999999999999999999999999999999974

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=100.00  E-value=7.5e-43  Score=309.30  Aligned_cols=222  Identities=30%  Similarity=0.640  Sum_probs=205.8

Q ss_pred             cCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443          57 DACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV  136 (330)
Q Consensus        57 ~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~  136 (330)
                      ..|++.+....|.|.||+||..|+++..|.|.|.++++++|.|.|..|+++...    .|..|+++|+++.......+++
T Consensus       232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~----~C~~D~l~i~dg~~~~~~~l~~  307 (457)
T 3kq4_B          232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHP----NCTLDYLAVYDGPSSNSHLLTQ  307 (457)
T ss_dssp             CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCT----TCCSSEEEEEESSSTTSEEEEE
T ss_pred             CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCC----CcCCCEEEEEeCCCCCchhhhh
Confidence            569888888999999999999999999999999999999999999999998865    7999999999999888888999


Q ss_pred             cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +||...|..+.|.++.++++|.++.....+||.+.|..                                          
T Consensus       308 ~CG~~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~------------------------------------------  345 (457)
T 3kq4_B          308 LCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ------------------------------------------  345 (457)
T ss_dssp             ECSSCCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEE------------------------------------------
T ss_pred             hcCCcCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEe------------------------------------------
Confidence            99999999999999999999999999999999999863                                          


Q ss_pred             CCCcceee--cCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeecc
Q psy8443         217 GGCKYEIT--APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFC  294 (330)
Q Consensus       217 ~~C~~~~~--~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~c  294 (330)
                       .|++.+.  ...|.|.||+||..||++.+|.|+|+++++++|+|+|..|+||....|.+|||+||||...    +++||
T Consensus       346 -~C~~~~~~~~~~G~i~Sp~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~----~~~~C  420 (457)
T 3kq4_B          346 -TCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQ----MGRYC  420 (457)
T ss_dssp             -CCTTEEECSCSSEEEECTTTTSCCCSSCEEEEEEECSTTCCCEEEEEEEECCCCTTTTSSEEEEEETTEE----EEEEC
T ss_pred             -ecCCcccccceeeEEecCCCCccCCCCCceEEEEEcCCCCEEEEEEeEEEEccCCCCCceEEEEEeCCcc----ceeec
Confidence             1344443  4579999999999999999999999999999999999999999999999999999998754    89999


Q ss_pred             CCCCCCcEEecCCEEEEEEEeCCC-CCCCCeEEEEe
Q psy8443         295 GIKLPYPIITGSNQLYMMFKSDAS-VQRKGFIATHT  329 (330)
Q Consensus       295 g~~~~~~~~s~~~~~~v~f~s~~~-~~~~GF~~~y~  329 (330)
                      |...|..++|+++.|+|+|+||.+ .+++||+|+|+
T Consensus       421 G~~~p~~~~s~~~~l~v~F~sd~~~~~~~GF~~~y~  456 (457)
T 3kq4_B          421 GVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWF  456 (457)
T ss_dssp             TTCCCCCEECSSSEEEEEEECCSCCSCCCEEEEEEC
T ss_pred             CCCCCCCEEeeCCEEEEEEEECCCCccCCCEEEEEE
Confidence            999999999999999999999998 99999999996

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=100.00  E-value=6.1e-42  Score=311.39  Aligned_cols=232  Identities=34%  Similarity=0.668  Sum_probs=202.7

Q ss_pred             cCCCCeeec-CCceEeCCCCCCCCCCCCCcEEEEEcCC-CCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCccc
Q psy8443          57 DACGGILKH-SNGTLTSPSFPDLYIKNKTCIWEIVAPP-QYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKS  133 (330)
Q Consensus        57 ~~C~~~~~~-~~g~~~sp~~p~~~~~~~~C~~~i~~~~-g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~  133 (330)
                      ..|++.+.. ..|.|.||+||..|+++..|.|.|.++. +.+|.|.|. .|+++..     .|.+|+|+|+++.......
T Consensus         4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~-----~C~~D~l~i~dg~~~~~~~   78 (579)
T 2qqk_A            4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKH-----DCKYDFIEIRDGDSESADL   78 (579)
T ss_dssp             -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCCT-----TSSSSEEEEEESSSTTSEE
T ss_pred             CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEecccccccC-----CCCeeEEEEEeCCCCCcce
Confidence            569998875 6899999999999999999999999995 579999999 8999863     6999999999998877788


Q ss_pred             ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCC
Q psy8443         134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD  213 (330)
Q Consensus       134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~  213 (330)
                      ++++||...|..+.|.++.+++.|.++.....+||.+.|.....                                    
T Consensus        79 l~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~------------------------------------  122 (579)
T 2qqk_A           79 LGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFKT------------------------------------  122 (579)
T ss_dssp             EEEECTTSCCCCEECSSSEEEEEEECC---CCCBCEEEEEEECC------------------------------------
T ss_pred             eeeECCCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEEEccc------------------------------------
Confidence            99999999999999999999999999999999999999975310                                    


Q ss_pred             cccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCC------CCCCCceEEEEcCCCCCc
Q psy8443         214 CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDS  287 (330)
Q Consensus       214 C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~------~~C~~d~l~i~~g~~~~~  287 (330)
                       ....|++.++..+|.|.||+||..||++.+|.|+|.++++++|.|.|..|+||..      ..|.+|+|+||||....+
T Consensus       123 -~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~F~~f~le~~~~~~~~~~C~~D~l~I~dg~~~~~  201 (579)
T 2qqk_A          123 -GSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVG  201 (579)
T ss_dssp             -CCCCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEEC-------------CCEEEEESSSTTTS
T ss_pred             -ccccccceeccCCceecCCCCcccCCCCCeEEEEEEcCCCCEEEEEEEEEEeecccccccCCCCCCEEEEEEeCCCCCC
Confidence             0134788899999999999999999999999999999999999999999999974      579999999999998888


Q ss_pred             cceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       288 ~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      +++++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus       202 ~~~~~~CG~~~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~  244 (579)
T 2qqk_A          202 PLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYL  244 (579)
T ss_dssp             CEEEEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             ceeEEeCCCCCCCcEEeeCCeEEEEEeccccccccceEEEEEE
Confidence            9999999999999999999999999999999999999999973

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.6e-30  Score=193.44  Aligned_cols=114  Identities=35%  Similarity=0.624  Sum_probs=109.0

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++...|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||....++++++|||.
T Consensus         5 ~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~CG~   84 (149)
T 2wno_A            5 KECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVEIYDSYDDVHGFVGRYCGD   84 (149)
T ss_dssp             SCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCTTCCSSEEEEESSSSSSSSEEEEECSS
T ss_pred             CCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCCCCCCCEEEEecCCCCCcceeeeEcCC
Confidence            56899999999999999999999999999999999999999999999999998899999999999998888899999999


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ..|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus        85 ~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~  118 (149)
T 2wno_A           85 ELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVA  118 (149)
T ss_dssp             SCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             CCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEE
Confidence            9999999999999999999999999999999974

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A

Probab=99.96  E-value=2.2e-29  Score=179.93  Aligned_cols=110  Identities=32%  Similarity=0.646  Sum_probs=101.2

Q ss_pred             CCCccee-ecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEE-EEeeCCC--CCCCCceEEEEcCCCCCccceee
Q psy8443         217 GGCKYEI-TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ-EFELEPH--QTCAYDHVVMYDGDSPDSLTLGR  292 (330)
Q Consensus       217 ~~C~~~~-~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~-~~~l~~~--~~C~~d~l~i~~g~~~~~~~~~~  292 (330)
                      +.|++.+ +...|.|.||+||..||++.+|.|+|+++++++|+|+|. .|+||..  ..|.+|+|+|+||.    .++++
T Consensus         2 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~----~~~~~   77 (115)
T 3poj_A            2 VECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGS----KVWGP   77 (115)
T ss_dssp             -CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETT----EEEEE
T ss_pred             eECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCCCCCCCCeEEEEEcCC----ccccc
Confidence            4577774 789999999999999999999999999999999999999 5999975  38999999999984    57899


Q ss_pred             ccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         293 FCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       293 ~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      +||...|..++|++|.|+|+|+||.+..++||+|+|+|
T Consensus        78 ~CG~~~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~a  115 (115)
T 3poj_A           78 FCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYRA  115 (115)
T ss_dssp             ECBSSCCCCEECCCSEEEEEEECCSSCCCCBCEEEEEC
T ss_pred             CcCCCCCCCEEecCCEEEEEEEcCCCCCCCCEEEEEEC
Confidence            99999999999999999999999999999999999987

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.95  E-value=1.1e-27  Score=183.21  Aligned_cols=147  Identities=41%  Similarity=0.826  Sum_probs=132.9

Q ss_pred             eeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCC
Q psy8443          62 ILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSK  141 (330)
Q Consensus        62 ~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~  141 (330)
                      .+....|.|.||+||..|+++..|.|.|.++++++|+|.|..|+|+...    .|.+|+|.|+++.    ..++++||..
T Consensus         7 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~----~~~~~~CG~~   78 (170)
T 1szb_A            7 WPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSSGA----KVLATLCGQE   78 (170)
T ss_dssp             CCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCT----TSCSSEEEEESSS----SEEEEECSBT
T ss_pred             eEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCC----CCCCCEEEEEeCC----ccccccCCCC
Confidence            4567889999999999999999999999999999999999999999765    8999999999984    4678999987


Q ss_pred             ------CC--CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCCCc---ccccccccCCceeeeccCCeEE
Q psy8443         142 ------LP--PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNNGG---CQHECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       142 ------~~--~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~~~---C~~~C~n~~gsy~C~C~~G~~l  207 (330)
                            .|  ..+.|.++.|++.|.++.....  .||.+.|+. +++||...++.   |.+.|.|+.|+|.|.|++||.|
T Consensus        79 ~~~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l  158 (170)
T 1szb_A           79 STDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVL  158 (170)
T ss_dssp             TTTCSSSCTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEE
T ss_pred             CCccccCCCCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEE
Confidence                  46  6899999999999999998876  999999964 89999987755   9999999999999999999999


Q ss_pred             ccCCCCccc
Q psy8443         208 LENGHDCKE  216 (330)
Q Consensus       208 ~~~~~~C~~  216 (330)
                      +.++++|.+
T Consensus       159 ~~d~~~C~~  167 (170)
T 1szb_A          159 HRNKRTCSE  167 (170)
T ss_dssp             CTTSSCEEE
T ss_pred             CCCCCcccc
Confidence            999999964

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.95  E-value=4.4e-27  Score=178.26  Aligned_cols=145  Identities=34%  Similarity=0.684  Sum_probs=126.8

Q ss_pred             ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCC
Q psy8443          64 KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLP  143 (330)
Q Consensus        64 ~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~  143 (330)
                      ....|.|.||+||..|+++..|.|.|.+++|++|+|.|..|+|+...    .|.+|+|+|+++.    ..++++||...+
T Consensus         2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~----~~~~~~CG~~~~   73 (159)
T 1nzi_A            2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSE----NCAYDSVQIISGD----TEEGRLCGQRSS   73 (159)
T ss_dssp             CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEC-------CCEEECSEECC
T ss_pred             CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCC----CCCCCEEEEEeCC----chhcccCCCCCC
Confidence            34679999999999999999999999999999999999999998764    7999999999985    367899998764


Q ss_pred             --------CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccC-CCcccccccccCCceeeeccCCeEEccCC
Q psy8443         144 --------PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENG  211 (330)
Q Consensus       144 --------~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~  211 (330)
                              ..+.+.++.|++.|.++.....  +||.+.|.. +++||... ...|.+.|.|+.|+|.|.|++||.|..++
T Consensus        74 ~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~  153 (159)
T 1nzi_A           74 NNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDM  153 (159)
T ss_dssp             CCSSCCCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTS
T ss_pred             CcccCCcceeEEecCCeEEEEEEecCccCcccccceeeeecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCC
Confidence                    3689999999999999988765  899999964 88999875 45788899999999999999999999999


Q ss_pred             CCccc
Q psy8443         212 HDCKE  216 (330)
Q Consensus       212 ~~C~~  216 (330)
                      +.|.+
T Consensus       154 ~~C~~  158 (159)
T 1nzi_A          154 KNCGV  158 (159)
T ss_dssp             SCEEC
T ss_pred             Ccccc
Confidence            99964

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.94  E-value=1.8e-26  Score=164.53  Aligned_cols=103  Identities=17%  Similarity=0.399  Sum_probs=96.1

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++..+|.|.||     ||++.+|.|+|+++++++|.|+|.+|+|    .|.+|+|+||||... ++++++|||.
T Consensus         7 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG~   76 (116)
T 1spp_B            7 DECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNL----ACGKEYVEVFDGLLS-GPSYGKLCAG   76 (116)
T ss_dssp             GGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEEC----CBTTEEEEEESSSTT-SCEEEEESEE
T ss_pred             CCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcc----cCCCCEEEEEcCCCC-CcccccccCc
Confidence            56899999999999998     8899999999999999999999999999    488999999999876 7889999999


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      . |..++|++|.|+|+|+||.+..++||+|.|++
T Consensus        77 ~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~  109 (116)
T 1spp_B           77 A-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYG  109 (116)
T ss_dssp             E-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEE
T ss_pred             C-CCCEEecCCEEEEEEEECCCCCCCCEEEEEEE
Confidence            8 78899999999999999999999999999974

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.94  E-value=1.8e-26  Score=162.42  Aligned_cols=102  Identities=23%  Similarity=0.390  Sum_probs=94.4

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++..+|.|.||     ||++.+|.|+|+++++++|.|+|.+|++    .|.+|+|+||||... ++++++|||.
T Consensus         4 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~I~dg~~~-~~~~~~~CG~   73 (109)
T 1spp_A            4 HACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNL----TCGKEYVEVLEGAPG-SKSLGKFCEG   73 (109)
T ss_dssp             CSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESEE
T ss_pred             cCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeec----cCCCCEEEEEeCCCC-CchhhhhhCC
Confidence            56899999999999997     8899999999999999999999999998    488999999999865 7889999999


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      . |..++| +|.|+|+|+||.+..++||+|+|++
T Consensus        74 ~-p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~  105 (109)
T 1spp_A           74 L-SILNRG-SSGMTVKYKRDSGHPASPYEIIFLR  105 (109)
T ss_dssp             E-EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred             C-CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEE
Confidence            6 678899 9999999999999999999999974

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.94  E-value=1.9e-26  Score=174.80  Aligned_cols=103  Identities=35%  Similarity=0.587  Sum_probs=92.3

Q ss_pred             ecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCC----
Q psy8443         224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLP----  299 (330)
Q Consensus       224 ~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~----  299 (330)
                      +...|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||.    .++++|||...+    
T Consensus         2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~~~~   77 (159)
T 1nzi_A            2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGD----TEEGRLCGQRSSNNPH   77 (159)
T ss_dssp             CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC-------CCEEECSEECCCCSS
T ss_pred             CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCCCCCCCEEEEEeCC----chhcccCCCCCCCccc
Confidence            567899999999999999999999999999999999999999999888999999999986    478899998764    


Q ss_pred             ----CcEEecCCEEEEEEEeCCCCCC--CCeEEEEeC
Q psy8443         300 ----YPIITGSNQLYMMFKSDASVQR--KGFIATHTT  330 (330)
Q Consensus       300 ----~~~~s~~~~~~v~f~s~~~~~~--~GF~~~y~~  330 (330)
                          ..++|++|.|+|+|+||.+..+  +||+|.|++
T Consensus        78 ~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~  114 (159)
T 1nzi_A           78 SPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA  114 (159)
T ss_dssp             CCCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEE
T ss_pred             CCcceeEEecCCeEEEEEEecCccCcccccceeeeec
Confidence                3689999999999999988775  999999963

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=99.94  E-value=3.1e-25  Score=190.68  Aligned_cols=198  Identities=31%  Similarity=0.666  Sum_probs=166.2

Q ss_pred             ceeeeeEeeccccCC---CCCCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCeeecCCceEeCCCCCCCC
Q psy8443           3 KLRIRWFKFDECALE---DHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLY   79 (330)
Q Consensus         3 ~~~~~C~dideC~~~---~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~~~~~~g~~~sp~~p~~~   79 (330)
                      +..++-.+.++|...   ...|.+.|.|..|+|.|.|..||.+..+...|.     ...|++.+....|.|.||+||..|
T Consensus       113 ~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~-----~~~c~~~~~~~~G~i~SP~yP~~Y  187 (361)
T 4aqb_A          113 DAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR-----VECSDNLFTQRTGVITSPDFPNPY  187 (361)
T ss_dssp             EEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEE-----CCCCCCCBCSSEEEEESTTTTSCC
T ss_pred             ccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEeccccccc-----cccccceEeCCCcEEecCCCCCCC
Confidence            455667788888643   236888999999999999999999999988883     455677788999999999999999


Q ss_pred             CCCCCcEEEEEcCCCCEEEEEEeE-EEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEEEE
Q psy8443          80 IKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFH  158 (330)
Q Consensus        80 ~~~~~C~~~i~~~~g~~~~l~~~~-~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~f~  158 (330)
                      +.+..|.|.|.+++|++|.|.|.. |+++...  ...|.+|+++|+++.    ..++++||...|..+.+.++.+++.|+
T Consensus       188 p~~~~C~w~i~~~~g~~i~l~f~~~~~~e~~~--~~~C~~D~l~i~dg~----~~~~~~cG~~~p~~~~s~~n~~~i~F~  261 (361)
T 4aqb_A          188 PKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGP----KVLGPFCGEKAPEPISTQSHSVLILFH  261 (361)
T ss_dssp             CSSCEEEEEEECCTTCEEEEEECSCCBBCCCS--SSSSSSSEEEEEETT----EEEEEECBSSCCCCEECSCSEEEEEEE
T ss_pred             CCCceeeEEeeeccCcEEEEEEeecccccCCc--cCccCCCeEEEeeCC----eeEEeeCCCCCCCCEeecCCeEEEEEE
Confidence            999999999999999999999986 5665432  336899999999984    467899999999999999999999999


Q ss_pred             eCCCCcccCceEEEecccCccccCCCcccccccccC------CceeeeccCCeEEccCC
Q psy8443         159 SDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTI------GSYICSCHNGYTLLENG  211 (330)
Q Consensus       159 ~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~------gsy~C~C~~G~~l~~~~  211 (330)
                      ++.....+||.+.|....++|.....+..+.+....      ....+.|++||.|.++.
T Consensus       262 SD~~~~~~GF~~~y~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~  320 (361)
T 4aqb_A          262 SDNSGENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDN  320 (361)
T ss_dssp             CCSCCCCCBCEEEEEEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETT
T ss_pred             eCCCCCccceEEEEEEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCC
Confidence            999999999999999888899876555555554433      33579999999997655

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.94  E-value=7.9e-26  Score=172.93  Aligned_cols=106  Identities=30%  Similarity=0.547  Sum_probs=97.4

Q ss_pred             ceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCC---
Q psy8443         221 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIK---  297 (330)
Q Consensus       221 ~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~---  297 (330)
                      ..++..+|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||.    .++++|||..   
T Consensus         6 ~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~   81 (170)
T 1szb_A            6 KWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGA----KVLATLCGQESTD   81 (170)
T ss_dssp             CCCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSS----SEEEEECSBTTTT
T ss_pred             ceEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCCCCCCCEEEEEeCC----ccccccCCCCCCc
Confidence            456788999999999999999999999999999999999999999999889999999999985    4789999987   


Q ss_pred             ---CC--CcEEecCCEEEEEEEeCCCCCC--CCeEEEEeC
Q psy8443         298 ---LP--YPIITGSNQLYMMFKSDASVQR--KGFIATHTT  330 (330)
Q Consensus       298 ---~~--~~~~s~~~~~~v~f~s~~~~~~--~GF~~~y~~  330 (330)
                         .|  ..++|++|.|+|+|+||.+..+  +||+|.|++
T Consensus        82 ~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~  121 (170)
T 1szb_A           82 TERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA  121 (170)
T ss_dssp             CSSSCTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred             cccCCCCceEEeeCCeEEEEEeccccccCcCcCceeeeec
Confidence               46  6899999999999999988876  999999963

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1

Probab=99.94  E-value=6.4e-26  Score=161.23  Aligned_cols=104  Identities=18%  Similarity=0.359  Sum_probs=96.0

Q ss_pred             cCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccC
Q psy8443         216 EGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCG  295 (330)
Q Consensus       216 ~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg  295 (330)
                      +..|++.++...|.|.||     ||++.+|.|+|+++++++|+|+|.+|+|    .|.+|+|+||||... ++++++|||
T Consensus         7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG   76 (114)
T 1sfp_A            7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQL----NCNKESLEIIDGLPG-SPVLGKICE   76 (114)
T ss_dssp             ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESE
T ss_pred             CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeee----ecCCCEEEEEcCCCC-CcceeEecC
Confidence            367999999999999997     7889999999999999999999999998    488999999999864 788999999


Q ss_pred             CCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         296 IKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       296 ~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      .. |..++|++|.|+|+|+||.+..++||+|.|++
T Consensus        77 ~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~  110 (114)
T 1sfp_A           77 GS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQ  110 (114)
T ss_dssp             EE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEE
T ss_pred             cC-CCCEEecCCeEEEEEEECCCCCCCCEEEEEEE
Confidence            98 77899999999999999999999999999974

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=99.93  E-value=3.4e-25  Score=183.93  Aligned_cols=161  Identities=33%  Similarity=0.724  Sum_probs=138.2

Q ss_pred             cceeeeeEeeccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCe-eecCCceEeCCCCCC
Q psy8443           2 IKLRIRWFKFDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGI-LKHSNGTLTSPSFPD   77 (330)
Q Consensus         2 ~~~~~~C~dideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~-~~~~~g~~~sp~~p~   77 (330)
                      |+..++-.+.++|.....   .|.+.|.|+.|+|.|.|.+||.|..++..|      ...|++. +....|.|.||+||.
T Consensus       111 F~a~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C------~~~Cg~~~~~~~~G~i~SP~yP~  184 (286)
T 1nt0_A          111 FEAFYAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTC------SALCSGQVFTGRSGFLSSPEYPQ  184 (286)
T ss_dssp             EEEEEEEEECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCE------EECCEEEEECSSSEEEECTTTTS
T ss_pred             EEEEEEeccCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCc------cccccCceecCCceEEeCCCCCC
Confidence            345667778899975433   599999999999999999999999999999      6789987 788999999999999


Q ss_pred             CCCCCCCcEEEEEcCCCCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEE
Q psy8443          78 LYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIE  156 (330)
Q Consensus        78 ~~~~~~~C~~~i~~~~g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~  156 (330)
                      .|+++..|.|.|++++|++|.|.|. .|+|+...  ...|.+|+|+|+++.    ..++++||...|..+.+.++.|++.
T Consensus       185 ~Yp~~~~C~w~I~~~~g~~I~l~f~~~f~le~~~--~~~C~~D~l~i~dg~----~~~~~~CG~~~p~~~~S~~n~l~i~  258 (286)
T 1nt0_A          185 PYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHP--EAQCPYDSLKIQTDK----REYGPFCGKTLPPRIETDSNKVTIT  258 (286)
T ss_dssp             CCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC------C--CEEEEECSS----CEEEEECBSSCCCCEECSSSEEEEE
T ss_pred             CCCCCCEEEEEEECCCceEEEEEEeceEEeccCC--CCCCCCcEEEEEeCC----cceEEEcCCCCCCCEEeeCCEEEEE
Confidence            9999999999999999999999996 79998642  237999999999973    5688999999999999999999999


Q ss_pred             EEeCCCCcccCceEEEec
Q psy8443         157 FHSDNSVQKSGFSAFFFT  174 (330)
Q Consensus       157 f~~~~~~~~~Gf~~~~~~  174 (330)
                      |+++.....+||.+.|..
T Consensus       259 F~sd~~~~~~GF~~~y~~  276 (286)
T 1nt0_A          259 FTTDESGNHTGWKIHYTS  276 (286)
T ss_dssp             EECCSCCCCCBCEEEEEE
T ss_pred             EEeCCCCCCCCEEEEEEE
Confidence            999999999999999975

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=99.93  E-value=5.3e-25  Score=182.42  Aligned_cols=161  Identities=35%  Similarity=0.744  Sum_probs=141.8

Q ss_pred             cceeeeeEeeccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCe-eecCCceEeCCCCCC
Q psy8443           2 IKLRIRWFKFDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGI-LKHSNGTLTSPSFPD   77 (330)
Q Consensus         2 ~~~~~~C~dideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~-~~~~~g~~~sp~~p~   77 (330)
                      |+..++-.++++|.....   .|.+.|.|..|+|+|.|++||.+..|...|      ...|++. +....|.|.||+||.
T Consensus       112 F~~~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C------~~~Cgg~~~~~~~G~i~SP~yP~  185 (278)
T 3dem_A          112 FDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTC------RVECSDNLFTQRTGVITSPDFPN  185 (278)
T ss_dssp             EEEEEEEEECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCE------ECCCCCCCBCSSEEEEESTTTTS
T ss_pred             eEEEEEEeccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCC------cccCCCceecCCccceeCCCCCC
Confidence            355667788999975433   799999999999999999999999999999      6789875 478899999999999


Q ss_pred             CCCCCCCcEEEEEcCCCCEEEEEEeE-EEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEE
Q psy8443          78 LYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIE  156 (330)
Q Consensus        78 ~~~~~~~C~~~i~~~~g~~~~l~~~~-~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~  156 (330)
                      .|+++..|.|.|+++++++|.|.|.. |+|+...  ...|.+|+|+|+++.    ..++++||...|..+.+.++.|++.
T Consensus       186 ~Yp~~~~C~w~i~~~~g~~i~l~f~~~f~le~~~--~~~C~~D~l~i~dg~----~~~~~~CG~~~p~~~~s~~~~l~v~  259 (278)
T 3dem_A          186 PYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGP----KVLGPFCGEKAPEPISTQSHSVLIL  259 (278)
T ss_dssp             CCCSSCEEEEEEECCTTCCEEEEECSCCBBCCCS--SSSSSSCEEEEEETT----EEEEEECBSSCCCCEECSCSEEEEE
T ss_pred             CCCCcCeEEEEEEeCCCcEEEEEEccccccccCC--CCCCCCCEEEEecCC----cccccccCCCCCCCEEEcCCEEEEE
Confidence            99999999999999999999999997 9998642  237999999999984    4578999999999999999999999


Q ss_pred             EEeCCCCcccCceEEEec
Q psy8443         157 FHSDNSVQKSGFSAFFFT  174 (330)
Q Consensus       157 f~~~~~~~~~Gf~~~~~~  174 (330)
                      |+++.....+||.+.|.+
T Consensus       260 F~sd~~~~~~GF~~~y~~  277 (278)
T 3dem_A          260 FHSDNSGENRGWRLSYRA  277 (278)
T ss_dssp             EECCSSCCCCBCEEEEEE
T ss_pred             EEECCCCCcCCEEEEEEE
Confidence            999999999999999965

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1

Probab=99.93  E-value=2.6e-25  Score=196.18  Aligned_cols=114  Identities=35%  Similarity=0.684  Sum_probs=108.1

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCC------CCCCceEEEEcCCCCCccce
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYDGDSPDSLTL  290 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~------~C~~d~l~i~~g~~~~~~~~  290 (330)
                      ..|++.++...|.|.||+||..||++.+|.|+|.++++++|.|.|.+|+||...      .|.+|||+||||....++++
T Consensus         9 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~   88 (450)
T 2qqm_A            9 PECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHI   88 (450)
T ss_dssp             CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEE
T ss_pred             CCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCccc
Confidence            578999999999999999999999999999999999999999999999999864      79999999999998889999


Q ss_pred             eeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         291 GRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       291 ~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus        89 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~  128 (450)
T 2qqm_A           89 GRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSV  128 (450)
T ss_dssp             EEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             eeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEec
Confidence            9999999999999999999999999999999999999974

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}

Probab=99.92  E-value=8.3e-25  Score=193.36  Aligned_cols=114  Identities=31%  Similarity=0.647  Sum_probs=106.1

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCC------CCCCCceEEEEcCCCCCccce
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDSLTL  290 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~------~~C~~d~l~i~~g~~~~~~~~  290 (330)
                      ..|++.++...|.|.||+||..||++.+|.|+|+++++++|.|.|..|+||..      ..|.+|+|+||||....++++
T Consensus         6 ~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~   85 (460)
T 2qqo_A            6 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI   85 (460)
T ss_dssp             -CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCEE
T ss_pred             CCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCccc
Confidence            45899999999999999999999999999999999999999999999999985      479999999999988888999


Q ss_pred             eeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         291 GRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       291 ~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus        86 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~  125 (460)
T 2qqo_A           86 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYL  125 (460)
T ss_dssp             EEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             ceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEE
Confidence            9999999999999999999999999999999999999974

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=99.90  E-value=8.3e-24  Score=191.35  Aligned_cols=113  Identities=28%  Similarity=0.601  Sum_probs=104.1

Q ss_pred             CCCcceeecC-cceeeCCCCCCCCCCCceeEEEEEeCCC-CEEEEEEE-EEeeCCCCCCCCceEEEEcCCCCCccceeec
Q psy8443         217 GGCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPG-HRIKLVFQ-EFELEPHQTCAYDHVVMYDGDSPDSLTLGRF  293 (330)
Q Consensus       217 ~~C~~~~~~~-~g~i~sp~~p~~y~~~~~C~w~i~~~~~-~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~  293 (330)
                      ..|++.++.. .|.|+||+||..||++++|.|+|++|.+ .+|.|+|. .|+||. .+|.+|||+||||....++++++|
T Consensus         7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~-~~C~~Dyl~I~dG~~~~~~~lg~~   85 (577)
T 4gz9_A            7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLED-RDCKYDYVEVIDGENEGGRLWGKF   85 (577)
T ss_dssp             CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCC-GGGTSSEEEEEESSSTTSEEEEEE
T ss_pred             CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecC-CCCCccEEEEEeCCCCCCcEEEEe
Confidence            4799998764 5999999999999999999999999865 68999996 799986 479999999999998899999999


Q ss_pred             cCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         294 CGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       294 cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      ||...|.+|+|++|.|+|+|+||.+..++||+|+|++
T Consensus        86 CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~  122 (577)
T 4gz9_A           86 CGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEI  122 (577)
T ss_dssp             CSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred             cCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEE
Confidence            9999999999999999999999999999999999964

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}

Probab=99.90  E-value=6.9e-23  Score=152.25  Aligned_cols=138  Identities=29%  Similarity=0.585  Sum_probs=108.2

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG  135 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~  135 (330)
                      ...|++.+....|.|.||+||..|+++..|.|.|+++++.+|+|.|..|+|+...    .|..|+|+|+++.......++
T Consensus         4 ~~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~~~~~~~~~   79 (149)
T 2wno_A            4 AKECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDP----GCLADYVEIYDSYDDVHGFVG   79 (149)
T ss_dssp             CSCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCT----TCCSSEEEEESSSSSSSSEEE
T ss_pred             CCCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCC----CCCCCEEEEecCCCCCcceee
Confidence            4579999988899999999999999999999999999999999999999999764    799999999999877777889


Q ss_pred             ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEec-ccCccccC---CCcccccccccCCce
Q psy8443         136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT-DKDECMTN---NGGCQHECRNTIGSY  197 (330)
Q Consensus       136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~-~~~eC~~~---~~~C~~~C~n~~gsy  197 (330)
                      ++||...|..+.|.++.|++.|.++.....+||.+.|.+ +..+|...   ...|++.|.|..|++
T Consensus        80 ~~CG~~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~~~~~~~~~~~~~~~~c~n~~~g~  145 (149)
T 2wno_A           80 RYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMDPVSKSSQGKNTSTTSTGNKNFLAGR  145 (149)
T ss_dssp             EECSSSCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEECC------------------------
T ss_pred             eEcCCCCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEECCCccCCCCCCccccccCCCceeccc
Confidence            999999999999999999999999999999999999975 45555432   235788888888765

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=99.88  E-value=2e-22  Score=183.34  Aligned_cols=112  Identities=34%  Similarity=0.643  Sum_probs=101.3

Q ss_pred             CCCcceeec-CcceeeCCCCCCCCCCCceeEEEEEeCC-CCEEEEEEE-EEeeCCCCCCCCceEEEEcCCCCCccceeec
Q psy8443         217 GGCKYEITA-PNGVIKTPNHPDYYPSKRECIWHFTTTP-GHRIKLVFQ-EFELEPHQTCAYDHVVMYDGDSPDSLTLGRF  293 (330)
Q Consensus       217 ~~C~~~~~~-~~g~i~sp~~p~~y~~~~~C~w~i~~~~-~~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~  293 (330)
                      ..|++.+.. ..|.|.||+||..||++.+|.|+|+++. +++|.|.|. .|+||. ..|.+|||+||||....+.++++|
T Consensus         4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~-~~C~~D~l~i~dg~~~~~~~l~~~   82 (579)
T 2qqk_A            4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEK-HDCKYDFIEIRDGDSESADLLGKH   82 (579)
T ss_dssp             -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCC-TTSSSSEEEEEESSSTTSEEEEEE
T ss_pred             CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEeccccccc-CCCCeeEEEEEeCCCCCcceeeeE
Confidence            578999885 6899999999999999999999999985 679999999 899996 579999999999998888999999


Q ss_pred             cCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443         294 CGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT  329 (330)
Q Consensus       294 cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~  329 (330)
                      ||...|..++|++|.|+|+|+||.+..++||+|+|+
T Consensus        83 CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~  118 (579)
T 2qqk_A           83 CGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYE  118 (579)
T ss_dssp             CTTSCCCCEECSSSEEEEEEECC---CCCBCEEEEE
T ss_pred             CCCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEE
Confidence            999999999999999999999999999999999997

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A

Probab=99.81  E-value=1.3e-19  Score=129.03  Aligned_cols=111  Identities=33%  Similarity=0.644  Sum_probs=98.9

Q ss_pred             cCCCCee-ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCcccc
Q psy8443          57 DACGGIL-KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQ  134 (330)
Q Consensus        57 ~~C~~~~-~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~  134 (330)
                      ..|++.+ ....|.|.||+||..|+++..|.|.|.++++.+|+|.|. .|+|+...  ...|..|+++|+++.    ..+
T Consensus         2 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~--~~~C~~D~l~i~dg~----~~~   75 (115)
T 3poj_A            2 VECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHP--EVPCPYDYIKIKAGS----KVW   75 (115)
T ss_dssp             -CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCS--SSSSCSCEEEEEETT----EEE
T ss_pred             eECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCC--CCCCCCeEEEEEcCC----ccc
Confidence            4687774 778999999999999999999999999999999999999 59998642  237989999999984    467


Q ss_pred             cccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEe
Q psy8443         135 GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFF  173 (330)
Q Consensus       135 ~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~  173 (330)
                      +++||...|..+.+.++.+++.|.++.....+||.+.|.
T Consensus        76 ~~~CG~~~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~  114 (115)
T 3poj_A           76 GPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYR  114 (115)
T ss_dssp             EEECBSSCCCCEECCCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred             ccCcCCCCCCCEEecCCEEEEEEEcCCCCCCCCEEEEEE
Confidence            899999999999999999999999999999999999885

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}

Probab=99.79  E-value=4.8e-18  Score=150.20  Aligned_cols=120  Identities=35%  Similarity=0.660  Sum_probs=105.3

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCC--CCCCCCCceEEEEeCCCCCccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSFKS  133 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~--~~~~C~~d~l~i~~~~~~~~~~  133 (330)
                      ...|++.+....|.|.||+||..|+++..|.|.|.+++|.+|.|.|..|+|+....  ....|.+|+|+|+++.......
T Consensus         5 ~~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~   84 (460)
T 2qqo_A            5 SEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPL   84 (460)
T ss_dssp             --CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCE
T ss_pred             CCCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCcc
Confidence            45699999999999999999999999999999999999999999999999987410  0136999999999998777788


Q ss_pred             ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      ++++||...|..+.|.++.+.+.|.++.....+||.+.|...
T Consensus        85 ~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  126 (460)
T 2qqo_A           85 IGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLV  126 (460)
T ss_dssp             EEEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEE
T ss_pred             cceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEEE
Confidence            899999999999999999999999999999999999999764

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.74  E-value=1.6e-17  Score=116.65  Aligned_cols=104  Identities=21%  Similarity=0.508  Sum_probs=93.8

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG  135 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~  135 (330)
                      ...|++.+....|.|.||     |+++..|.|.|.+++|++|.|.|..|++        .|.+|+|+|+++... ...++
T Consensus         3 ~~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~I~dg~~~-~~~~~   68 (109)
T 1spp_A            3 YHACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNL--------TCGKEYVEVLEGAPG-SKSLG   68 (109)
T ss_dssp             ECSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEE
T ss_pred             ccCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeec--------cCCCCEEEEEeCCCC-Cchhh
Confidence            567999999999999998     6789999999999999999999999997        477899999999865 66889


Q ss_pred             ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      ++||.. |..+.| ++.+++.|+++.....+||.+.|.++
T Consensus        69 ~~CG~~-p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~  106 (109)
T 1spp_A           69 KFCEGL-SILNRG-SSGMTVKYKRDSGHPASPYEIIFLRD  106 (109)
T ss_dssp             EESEEE-EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEEE
T ss_pred             hhhCCC-CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence            999986 778888 99999999999999999999999764

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1

Probab=99.74  E-value=2.9e-17  Score=144.87  Aligned_cols=120  Identities=30%  Similarity=0.541  Sum_probs=107.5

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCC--CCCCCCCceEEEEeCCCCCccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSFKS  133 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~--~~~~C~~d~l~i~~~~~~~~~~  133 (330)
                      ...|++.+....|.|.||+||..|+++..|.|.|.+++|++|.|.|..|+|+....  ....|.+|+|+|+++.......
T Consensus         8 ~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~   87 (450)
T 2qqm_A            8 GPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPH   87 (450)
T ss_dssp             -CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCE
T ss_pred             CCCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCcc
Confidence            45799999889999999999999999999999999999999999999999987420  0126999999999998877888


Q ss_pred             ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      ++++||...|..+.|.++.+++.|.++.....+||.+.|...
T Consensus        88 ~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  129 (450)
T 2qqm_A           88 IGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVL  129 (450)
T ss_dssp             EEEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred             ceeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEecc
Confidence            999999999999999999999999999999999999999764

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.73  E-value=3e-17  Score=116.63  Aligned_cols=106  Identities=22%  Similarity=0.543  Sum_probs=95.7

Q ss_pred             cccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccc
Q psy8443          55 ARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQ  134 (330)
Q Consensus        55 ~~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~  134 (330)
                      ....|++.+....|.|.||     |+++..|.|.|.+++|++|.|.|..|+|        .|..|+|+|+++... ...+
T Consensus         5 ~~~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~-~~~~   70 (116)
T 1spp_B            5 GPDECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNL--------ACGKEYVEVFDGLLS-GPSY   70 (116)
T ss_dssp             GGGGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEEC--------CBTTEEEEEESSSTT-SCEE
T ss_pred             CCCCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcc--------cCCCCEEEEEcCCCC-Cccc
Confidence            3567999999889999998     6789999999999999999999999998        477899999999765 6788


Q ss_pred             cccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         135 GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       135 ~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      +++||.. |..+.+.++.|++.|.++.....+||.+.|.+.
T Consensus        71 ~~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  110 (116)
T 1spp_B           71 GKLCAGA-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYGS  110 (116)
T ss_dssp             EEESEEE-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEEE
T ss_pred             ccccCcC-CCCEEecCCEEEEEEEECCCCCCCCEEEEEEEe
Confidence            9999987 788999999999999999999999999999753

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1

Probab=99.71  E-value=9.7e-17  Score=113.70  Aligned_cols=105  Identities=22%  Similarity=0.569  Sum_probs=94.5

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG  135 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~  135 (330)
                      ...|++.+....|.|.||     |+++..|.|.|.+++|++|+|.|..|++        .|.+|+|+|+++... ...++
T Consensus         7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~-~~~~~   72 (114)
T 1sfp_A            7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQL--------NCNKESLEIIDGLPG-SPVLG   72 (114)
T ss_dssp             ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEE
T ss_pred             CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeee--------ecCCCEEEEEcCCCC-Cccee
Confidence            567999999899999997     6689999999999999999999999997        477899999999764 56788


Q ss_pred             ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      ++||.. |..+.+.++.+++.|+++.....+||.+.|..+
T Consensus        73 ~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  111 (114)
T 1sfp_A           73 KICEGS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD  111 (114)
T ss_dssp             EESEEE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred             EecCcC-CCCEEecCCeEEEEEEECCCCCCCCEEEEEEEE
Confidence            999987 778999999999999999999999999999754

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.61  E-value=4.8e-16  Score=103.86  Aligned_cols=42  Identities=40%  Similarity=0.698  Sum_probs=35.4

Q ss_pred             cccCccccCCCccc-ccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         174 TDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       174 ~~~~eC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .++|||...+..|. ++|+|+.|+|.|.|++||.+..+++.|.
T Consensus        44 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci   86 (86)
T 1lmj_A           44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI   86 (86)
T ss_dssp             EECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred             CCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence            36778887776675 5799999999999999999998888773

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.55  E-value=1.2e-14  Score=109.72  Aligned_cols=49  Identities=43%  Similarity=0.854  Sum_probs=41.8

Q ss_pred             CceEE----EecccCccccCCCcccc-cccccCCceeeeccCCeEEccCCCCcc
Q psy8443         167 GFSAF----FFTDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       167 Gf~~~----~~~~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ||.+.    .+.++|||...+..|.+ .|+|+.|+|+|.|++||.+..+++.|+
T Consensus       109 G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~  162 (162)
T 1uzk_A          109 GFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD  162 (162)
T ss_dssp             TEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence            66653    45799999988777874 799999999999999999999998884

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.53  E-value=1.8e-15  Score=104.94  Aligned_cols=41  Identities=32%  Similarity=0.781  Sum_probs=34.8

Q ss_pred             eeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           7 RWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .| |+|||...++.|.+.|+|++|+|.|.|++||++. +++.|
T Consensus        26 ~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C   66 (107)
T 2w2n_E           26 AM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRC   66 (107)
T ss_dssp             CB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEE
T ss_pred             CC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCcc
Confidence            46 8999998777899999999999999999999853 44555

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.52  E-value=2.3e-14  Score=106.39  Aligned_cols=54  Identities=37%  Similarity=0.681  Sum_probs=46.3

Q ss_pred             CCcccCce---EEEecccCccccCCCcccc-cccccCCceeeeccCCeEEccCCCCcc
Q psy8443         162 SVQKSGFS---AFFFTDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       162 ~~~~~Gf~---~~~~~~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ..+..||.   +..+.++|||...+..|.+ +|+|+.|+|.|.|++||.+..+++.|.
T Consensus        90 C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~  147 (147)
T 2w86_A           90 PICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL  147 (147)
T ss_dssp             TTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred             ccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence            45678885   5677899999988878875 799999999999999999999998873

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.51  E-value=9.6e-15  Score=96.40  Aligned_cols=40  Identities=40%  Similarity=0.909  Sum_probs=34.2

Q ss_pred             eeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           7 RWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +|.|||||.. +.+|.+ .|+|+.|+|+|.|++||++  +|+.|
T Consensus         1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C   41 (82)
T 1emn_A            1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNEC   41 (82)
T ss_dssp             CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEE
T ss_pred             CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCcc
Confidence            5889999987 567876 9999999999999999985  45566

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.48  E-value=6.8e-14  Score=102.99  Aligned_cols=56  Identities=29%  Similarity=0.726  Sum_probs=41.0

Q ss_pred             CccccCCCcccccc-cccCCceeeeccCCeEEccCCCCcccCCCcceeecCcceeeCCCCCC
Q psy8443         177 DECMTNNGGCQHEC-RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPD  237 (330)
Q Consensus       177 ~eC~~~~~~C~~~C-~n~~gsy~C~C~~G~~l~~~~~~C~~~~C~~~~~~~~g~i~sp~~p~  237 (330)
                      ++|...++.|.++| +|+.|+|.|.|++||.+..+++.|.+.     ...+-|.+.+++.|.
T Consensus        86 deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~-----~~~pCg~~~~~~~~~  142 (146)
T 1x7a_L           86 ATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA-----VPFPCGRVSVSHSPT  142 (146)
T ss_dssp             CCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC-----SSSCTTCCCTTTTTT
T ss_pred             ccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC-----CCCCCCCcccCcCCc
Confidence            44544455677789 999999999999999999999999752     123445556666654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.46  E-value=1.6e-14  Score=96.55  Aligned_cols=41  Identities=41%  Similarity=0.903  Sum_probs=34.8

Q ss_pred             EeeccccCCCCCCe-eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           9 FKFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|||||...++.|. ++|+|++|+|+|.|++||++..+++.|
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C   42 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSC   42 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEE
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcC
Confidence            38999998776783 499999999999999999977666666

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.44  E-value=8.2e-14  Score=98.88  Aligned_cols=49  Identities=37%  Similarity=0.790  Sum_probs=38.5

Q ss_pred             ccCce---EEEecccCccccCCCcccccccccCCceeeeccCCeEEccC-CCCc
Q psy8443         165 KSGFS---AFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLEN-GHDC  214 (330)
Q Consensus       165 ~~Gf~---~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~-~~~C  214 (330)
                      ..||.   +..+.++|||... .+|.++|+|+.|+|.|.|++||.+..+ ++.|
T Consensus        66 ~~Gy~~~~g~~C~dideC~~~-~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C  118 (118)
T 1dx5_I           66 PEGYILDDGFICTDIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC  118 (118)
T ss_dssp             CTTEEEETTTEEEECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CCCccCCCCCccccccccCCC-CCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence            34554   3456799999873 567888999999999999999998776 6554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.42  E-value=2.9e-14  Score=123.54  Aligned_cols=41  Identities=34%  Similarity=0.966  Sum_probs=0.0

Q ss_pred             EeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           9 FKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|+|||...++.|.+.|.|+.|+|+|.|++||+|..+|+.|
T Consensus         1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C   41 (386)
T 3v65_B            1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC   41 (386)
T ss_dssp             -----------------------------------------
T ss_pred             CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc
Confidence            48999998888999999999999999999999988888888

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.41  E-value=1.6e-13  Score=96.79  Aligned_cols=41  Identities=37%  Similarity=0.792  Sum_probs=34.8

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +++|...++.|.++|+|+.++|.|.|++||.+..+++.|.+
T Consensus        54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~   94 (114)
T 1aut_L           54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   94 (114)
T ss_dssp             SSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence            34566556678889999999999999999999999999864

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.39  E-value=9.6e-13  Score=95.99  Aligned_cols=40  Identities=45%  Similarity=0.981  Sum_probs=34.3

Q ss_pred             eeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +|.|||||....++|.+  +|+|+.|+|+|.|++||+    |..|.
T Consensus         1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~   42 (135)
T 2vj3_A            1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   42 (135)
T ss_dssp             --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCccc
Confidence            47899999976678976  999999999999999998    77883

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.34  E-value=2.4e-13  Score=104.06  Aligned_cols=40  Identities=40%  Similarity=0.926  Sum_probs=34.4

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      ++|...++.|.+.|.|+.|+|.|.|++||.|..++..|.+
T Consensus        82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence            4566556678889999999999999999999999999975

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.34  E-value=9.4e-13  Score=114.54  Aligned_cols=42  Identities=36%  Similarity=0.804  Sum_probs=34.9

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcccC
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG  217 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~  217 (330)
                      ++|||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|...
T Consensus        39 dideC~-~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~   80 (400)
T 3p5b_L           39 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV   80 (400)
T ss_dssp             ECCCCS-TTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCS
T ss_pred             Cchhhh-ccCCCCCccCCCccceeeeccccccccccccceeec
Confidence            455665 245687889999999999999999999999999764

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.32  E-value=1.5e-12  Score=96.06  Aligned_cols=44  Identities=32%  Similarity=0.687  Sum_probs=37.5

Q ss_pred             ecccCccccCCCccc--ccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         173 FTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       173 ~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +.+++||......|.  +.|+|+.|+|.|.|++||.+..+++.|.+
T Consensus        93 C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~  138 (143)
T 2bou_A           93 CQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK  138 (143)
T ss_dssp             EEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred             cCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence            358899987667776  57999999999999999999988888864

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=99.26  E-value=2.9e-12  Score=80.31  Aligned_cols=44  Identities=34%  Similarity=0.664  Sum_probs=40.8

Q ss_pred             eEeeccccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443           8 WFKFDECALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         8 C~dideC~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      ..|||||...+++|.|.|.|++| +|+|+|++||.|..|+++|++
T Consensus         2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d   46 (69)
T 1kli_L            2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   46 (69)
T ss_dssp             CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence            46899999888899999999999 999999999999999999965

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.25  E-value=1.8e-12  Score=94.08  Aligned_cols=40  Identities=40%  Similarity=0.926  Sum_probs=33.3

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      ++|...++.|.+.|+++.|+|.|.|++||.+..+++.|.+
T Consensus        82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence            4455555567778999999999999999999999999964

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=99.22  E-value=7.1e-12  Score=75.27  Aligned_cols=41  Identities=32%  Similarity=0.805  Sum_probs=37.3

Q ss_pred             eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443          11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      .|||...++.|.+.|+|++|+|+|.|++||.|..|+++|++
T Consensus         1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d   41 (55)
T 2jkh_L            1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   41 (55)
T ss_dssp             -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence            38998777889999999999999999999999999999965

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.21  E-value=9.9e-12  Score=91.20  Aligned_cols=38  Identities=34%  Similarity=0.815  Sum_probs=33.5

Q ss_pred             eeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|.|||+|..  .+|.+  +|+|+.|+|.|.|++||+    |+.|.
T Consensus        43 ~c~did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~   82 (142)
T 2c4f_L           43 SYSDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE----GRNCE   82 (142)
T ss_dssp             HHTTCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE----STTSC
T ss_pred             cCCccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCcc----CCccc
Confidence            5789999985  56876  999999999999999998    88883

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=99.19  E-value=1.9e-11  Score=73.27  Aligned_cols=42  Identities=48%  Similarity=1.071  Sum_probs=37.8

Q ss_pred             EeeccccCC--------CCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALE--------DHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~--------~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|||||...        ...|.+.|+|++|+|+|.|++||.+..++++|+
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence            589999864        367999999999999999999999999999994

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.14  E-value=5.2e-11  Score=111.43  Aligned_cols=42  Identities=36%  Similarity=0.804  Sum_probs=35.3

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcccC
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG  217 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~  217 (330)
                      +++||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|.+.
T Consensus       351 dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~  392 (791)
T 3m0c_C          351 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV  392 (791)
T ss_dssp             CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEET
T ss_pred             cCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeeec
Confidence            455665 345688899999999999999999999999999763

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.11  E-value=5.3e-11  Score=91.94  Aligned_cols=38  Identities=29%  Similarity=0.633  Sum_probs=32.3

Q ss_pred             eeeeEeeccccCC--CCCCee--eEEeec-----ceEEEecCCCcEE
Q psy8443           5 RIRWFKFDECALE--DHGCEH--TCKNIL-----GGYECSCKIGYEL   42 (330)
Q Consensus         5 ~~~C~dideC~~~--~~~C~~--~C~n~~-----gsy~C~C~~G~~l   42 (330)
                      +.+|.|||||...  ..+|.+  +|+|+.     |+|+|.|++||+.
T Consensus        38 ~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g   84 (186)
T 1z1y_A           38 ENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTL   84 (186)
T ss_dssp             TTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEE
T ss_pred             CCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCcc
Confidence            3479999999854  467974  999999     8999999999993

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.05  E-value=2.2e-10  Score=102.86  Aligned_cols=44  Identities=25%  Similarity=0.690  Sum_probs=33.4

Q ss_pred             EeeccccCCCCCCee--eEEeecc-eEEE-ecCCCcEEcCCCCccccccccccCCC
Q psy8443           9 FKFDECALEDHGCEH--TCKNILG-GYEC-SCKIGYELHSDGKICVGSVKARDACG   60 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~g-sy~C-~C~~G~~l~~dg~~C~~~~~~~~~C~   60 (330)
                      .|||||..  ++|.+  +|+|+.+ +|+| .|++||+  ++++.|+    .+++|.
T Consensus         1 ~DIDeC~~--nPC~~gg~C~n~~~Gsy~C~~C~~Gyt--Gdg~~Ce----DiDEC~   48 (634)
T 1yo8_A            1 ADPDGCLS--NPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCE----DLDECA   48 (634)
T ss_dssp             ---CGGGG--CCSCTTCCEEECTTSCEEECCCCTTBC--SCSSSCC----BCCTTT
T ss_pred             CcccccCC--CCCCCCCEEecCCCCCeECCcCCCccC--CCCCCcc----cccccc
Confidence            48999974  57875  9999985 5999 9999998  7779994    466674

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.03  E-value=8.4e-11  Score=109.32  Aligned_cols=39  Identities=36%  Similarity=0.913  Sum_probs=33.7

Q ss_pred             eeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          10 KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +++||...++.|.+.|+|++|+|+|.|++||++ .+++.|
T Consensus       293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C  331 (699)
T 1n7d_A          293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRC  331 (699)
T ss_dssp             CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCC
T ss_pred             ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcc
Confidence            688998877789999999999999999999986 566667

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=99.01  E-value=1.3e-10  Score=68.34  Aligned_cols=39  Identities=38%  Similarity=0.944  Sum_probs=34.9

Q ss_pred             ccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443          14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      |...+++|.+.|+|++|+|+|.|++||+|..|+++|+++
T Consensus         1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~di   39 (51)
T 1kig_L            1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVST   39 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEEC
T ss_pred             CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccC
Confidence            555677899999999999999999999999999999653

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.98  E-value=3.7e-10  Score=66.91  Aligned_cols=38  Identities=39%  Similarity=0.915  Sum_probs=34.5

Q ss_pred             ccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443          14 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      |...+++|+|.|+|++| +|+|+|++||+|..|+++|++
T Consensus         2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d   40 (53)
T 2bz6_L            2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence            66666789999999999 899999999999999999965

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.95  E-value=6.5e-10  Score=81.97  Aligned_cols=44  Identities=18%  Similarity=0.489  Sum_probs=36.3

Q ss_pred             CcccCceEEEec-ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443         163 VQKSGFSAFFFT-DKDECMTNNGGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       163 ~~~~Gf~~~~~~-~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      .+..||.+..+. ++++|...+....++|+++.++|.|.|++||.
T Consensus        83 ~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  127 (143)
T 4d90_A           83 KCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM  127 (143)
T ss_dssp             ECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred             ECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence            356677777776 89999977655567899999999999999998

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.95  E-value=2.7e-10  Score=75.71  Aligned_cols=45  Identities=29%  Similarity=0.657  Sum_probs=40.6

Q ss_pred             eeeeEeeccccCCCCCCe-eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           5 RIRWFKFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +..|.|||||...+..|. ++|+|++|+|+|.|++||++..++++|
T Consensus        40 g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           40 MKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             SSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence            678999999998777787 499999999999999999998898888

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.90  E-value=1e-09  Score=66.51  Aligned_cols=39  Identities=36%  Similarity=0.798  Sum_probs=34.8

Q ss_pred             ccCCCCCCeeeEEeec-ceEEEecCCCcEEcCCCCccccc
Q psy8443          14 CALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      |...+++|+|.|+|++ |+|.|.|++||.|..|+++|++.
T Consensus         2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~   41 (59)
T 2wph_E            2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPA   41 (59)
T ss_dssp             TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred             CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence            6666778999999999 69999999999999999999753

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.87  E-value=9.4e-10  Score=92.56  Aligned_cols=42  Identities=43%  Similarity=0.884  Sum_probs=34.0

Q ss_pred             ccCccccC-CCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         175 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       175 ~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +++||... +.+|.+.|.|+.++|.|.|++||.+..++..|.+
T Consensus        42 ~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   84 (317)
T 3h5c_B           42 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP   84 (317)
T ss_dssp             CSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred             CcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccc
Confidence            44555542 3567778999999999999999999999999976

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.86  E-value=6.4e-09  Score=80.15  Aligned_cols=52  Identities=27%  Similarity=0.423  Sum_probs=35.8

Q ss_pred             cccCceEE--EecccCccccCCCccccccc----ccCCceeeeccCCeEEcc-CCCCccc
Q psy8443         164 QKSGFSAF--FFTDKDECMTNNGGCQHECR----NTIGSYICSCHNGYTLLE-NGHDCKE  216 (330)
Q Consensus       164 ~~~Gf~~~--~~~~~~eC~~~~~~C~~~C~----n~~gsy~C~C~~G~~l~~-~~~~C~~  216 (330)
                      +..||.+.  .+. +++|...+..-.++|+    ++.++|.|.|++||.+.. ++..|.+
T Consensus        78 C~~G~~g~~~~C~-~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~  136 (186)
T 1z1y_A           78 CIEGYTLXEDTCV-LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX  136 (186)
T ss_dssp             ECTTEEEETTEEE-EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE
T ss_pred             CCCCCccCCCCCC-CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE
Confidence            34455544  233 6888876432235577    999999999999999865 6677764

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.80  E-value=1.9e-09  Score=67.51  Aligned_cols=43  Identities=40%  Similarity=1.010  Sum_probs=40.7

Q ss_pred             cccCccccCCCcccccccccCC-ceeeeccCCeEEccCCCCccc
Q psy8443         174 TDKDECMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       174 ~~~~eC~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|++||..+++.|.+.|.|+.| +|.|.|++||.|..|+++|.+
T Consensus         3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d   46 (69)
T 1kli_L            3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   46 (69)
T ss_dssp             SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence            5899999999999999999999 899999999999999999976

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.79  E-value=2.1e-09  Score=64.35  Aligned_cols=41  Identities=39%  Similarity=0.925  Sum_probs=37.5

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|||..+++.|.+.|.|+.|+|.|.|++||.|..+++.|.+
T Consensus         1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d   41 (55)
T 2jkh_L            1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   41 (55)
T ss_dssp             -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence            37898888889999999999999999999999999999976

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.77  E-value=3.5e-09  Score=78.26  Aligned_cols=46  Identities=30%  Similarity=0.730  Sum_probs=42.0

Q ss_pred             eeeeeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           4 LRIRWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .+.+|.|||||...++.|.+ +|+|++|+|+|.|++||++..++++|
T Consensus       100 ~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C  146 (147)
T 2w86_A          100 KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC  146 (147)
T ss_dssp             ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred             CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence            46789999999977778986 99999999999999999999999988

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.73  E-value=6e-09  Score=62.17  Aligned_cols=43  Identities=47%  Similarity=1.067  Sum_probs=37.8

Q ss_pred             cccCccccC--------CCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         174 TDKDECMTN--------NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       174 ~~~~eC~~~--------~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|+|||...        ...|.+.|+|+.|+|.|.|++||.+..+++.|.+
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~   52 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence            478999875        3679999999999999999999999999999864

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.72  E-value=9.9e-09  Score=64.77  Aligned_cols=39  Identities=26%  Similarity=0.484  Sum_probs=28.4

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEec-CCCcEEcCCCC
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSC-KIGYELHSDGK   47 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C-~~G~~l~~dg~   47 (330)
                      .|||||....+.|.+  +|+|++|+|+|.| ..||....++.
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~   42 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE   42 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence            389999987778953  8999999999992 24554433333

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.67  E-value=2.7e-09  Score=73.75  Aligned_cols=44  Identities=36%  Similarity=0.871  Sum_probs=4.8

Q ss_pred             eeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           5 RIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +.+|.|||||.. ...|.+.|+|++|+|.|.|++||++..++++|
T Consensus        63 g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C  106 (107)
T 2w2n_E           63 QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC  106 (107)
T ss_dssp             TTEEEC---------------------------------------
T ss_pred             CCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCcc
Confidence            368999999984 46798999999999999999999988888887

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.63  E-value=1.4e-08  Score=59.54  Aligned_cols=38  Identities=37%  Similarity=0.924  Sum_probs=34.5

Q ss_pred             cccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|.|+.|+|.|.|++||.|..|+++|.+
T Consensus         1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~d   38 (51)
T 1kig_L            1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence            45567889999999999999999999999999999975

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.60  E-value=2.7e-08  Score=65.26  Aligned_cols=44  Identities=36%  Similarity=0.889  Sum_probs=36.8

Q ss_pred             eeeeeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           4 LRIRWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .+..|.|||||.. ..+|.+ +|+|+.|+|+|.|++||++..+ +.|
T Consensus        37 ~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C   81 (82)
T 1emn_A           37 AGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC   81 (82)
T ss_dssp             ETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred             CCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence            3668999999985 357874 9999999999999999997666 666

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.52  E-value=1.3e-08  Score=74.68  Aligned_cols=33  Identities=33%  Similarity=0.934  Sum_probs=20.0

Q ss_pred             eeEeeccccCCCCCCee--eEEeecceEEEecCCCcE
Q psy8443           7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYE   41 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~   41 (330)
                      +|.|||||..  ++|.+  +|+|+.|+|.|.|++||+
T Consensus        44 ~c~dideC~~--~pC~n~g~C~~~~~~y~C~C~~G~~   78 (146)
T 1x7a_L           44 QYVDGDQCEP--NPCLNGGLCKDDINSYECWCQVGFE   78 (146)
T ss_dssp             ------CCSS--CSSCTTCEEEECSSCEEEECCSSEE
T ss_pred             cCCCcCcCCC--CCCCCCCEeECCCCCEEEecCCCCc
Confidence            6778888864  45664  788888888888888876

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.51  E-value=6.5e-08  Score=69.96  Aligned_cols=47  Identities=28%  Similarity=0.640  Sum_probs=36.2

Q ss_pred             eeeeEe-e-ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           5 RIRWFK-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         5 ~~~C~d-i-deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      +..|.+ | |+|...++.|.++|+|+.|+|.|.|++||++..+|+.|.+
T Consensus        73 G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence            456877 6 8998766789899999999999999999999999999964

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.50  E-value=2e-08  Score=66.68  Aligned_cols=44  Identities=39%  Similarity=0.803  Sum_probs=38.8

Q ss_pred             eeeeEeeccccCCCCCCeeeEEeecceEEEec--CCCcEEcCCCCccc
Q psy8443           5 RIRWFKFDECALEDHGCEHTCKNILGGYECSC--KIGYELHSDGKICV   50 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C--~~G~~l~~dg~~C~   50 (330)
                      +.+|.|||||..  ++|.++|+|++|+|+|.|  .+||.+..+++.|+
T Consensus        39 g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~   84 (87)
T 1z6c_A           39 SKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE   84 (87)
T ss_dssp             TTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCB
T ss_pred             CCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCCcce
Confidence            578999999975  579899999999999999  58998888888884

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.50  E-value=4.7e-08  Score=57.77  Aligned_cols=38  Identities=42%  Similarity=1.147  Sum_probs=34.6

Q ss_pred             cccCCCcccccccccCC-ceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|.|+.| +|.|.|++||.|..|+++|.+
T Consensus         2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d   40 (53)
T 2bz6_L            2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence            66667889999999999 899999999999999999976

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.49  E-value=6.8e-08  Score=73.91  Aligned_cols=47  Identities=28%  Similarity=0.640  Sum_probs=36.3

Q ss_pred             eeeeEe-e-ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           5 RIRWFK-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         5 ~~~C~d-i-deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      +..|.+ | |||...++.|.+.|+|+.|+|.|.|++||.+..+|+.|.+
T Consensus        73 G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence            456876 6 8998766789999999999999999999999999999964

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.49  E-value=1.3e-07  Score=52.21  Aligned_cols=35  Identities=40%  Similarity=0.991  Sum_probs=30.3

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|+|||..  .+|.+  +|+++.++|+|.|++||+    |..|
T Consensus         1 ~d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~----G~~C   37 (39)
T 1edm_B            1 VDGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNC   37 (39)
T ss_dssp             CCCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred             CccccCCC--CCCCCCCEeEcCCCceEeECCCCCc----CCcc
Confidence            37899985  46765  999999999999999998    7788

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.47  E-value=3.5e-08  Score=69.68  Aligned_cols=44  Identities=30%  Similarity=0.619  Sum_probs=37.4

Q ss_pred             eeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCC-CCcc
Q psy8443           5 RIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSD-GKIC   49 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~d-g~~C   49 (330)
                      +.+|.|||||.. .++|.++|+|++|+|+|.|++||++..+ ++.|
T Consensus        74 g~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C  118 (118)
T 1dx5_I           74 GFICTDIDECEN-GGFCSGVCHNLPGTFECICGPDSALAGQIGTDC  118 (118)
T ss_dssp             TTEEEECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CCccccccccCC-CCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence            568999999987 3678779999999999999999997766 6655

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.46  E-value=7.5e-08  Score=58.22  Aligned_cols=38  Identities=39%  Similarity=0.991  Sum_probs=34.5

Q ss_pred             cccCCCcccccccccC-CceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|.|+. |+|.|.|++||.|..|+++|.+
T Consensus         2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d   40 (59)
T 2wph_E            2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP   40 (59)
T ss_dssp             TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence            5667788999999999 6999999999999999999976

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.45  E-value=8.2e-08  Score=70.51  Aligned_cols=46  Identities=26%  Similarity=0.596  Sum_probs=40.5

Q ss_pred             eeeeEeeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           5 RIRWFKFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +..|.|||||....+.|.  ++|+|++|+|+|.|++||++..+++.|.
T Consensus        90 ~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~  137 (143)
T 2bou_A           90 ENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ  137 (143)
T ss_dssp             GCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred             CCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence            458999999997667897  4999999999999999999888888884

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.42  E-value=5.6e-08  Score=84.03  Aligned_cols=47  Identities=34%  Similarity=0.746  Sum_probs=24.8

Q ss_pred             ceeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           3 KLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         3 ~~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +++.+|.|||||. .++.|.+.|+|++|+|.|.|++||++..++++|.
T Consensus        36 ~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           36 EDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             -----------------CCTTEEC-----CCEECCTTEEECTTSSCEE
T ss_pred             CCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeEC
Confidence            4578899999998 3568999999999999999999999999999994

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=98.40  E-value=5.5e-08  Score=77.92  Aligned_cols=42  Identities=29%  Similarity=0.809  Sum_probs=33.8

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGS   52 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~   52 (330)
                      .|||||....+.|..  .|+|++|+|.|.|++||.  ++|+.|.+.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~   46 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAE   46 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEET
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCC
Confidence            589999977788974  899999999999999998  889999654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.37  E-value=1.8e-07  Score=65.56  Aligned_cols=45  Identities=33%  Similarity=0.643  Sum_probs=38.9

Q ss_pred             eeEee---ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           7 RWFKF---DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         7 ~C~di---deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      .|.++   +||...++.|.++|+|+.|+|+|.|++||++..+++.|++
T Consensus        47 ~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~   94 (114)
T 1aut_L           47 FCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   94 (114)
T ss_dssp             TSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence            46664   4698766789999999999999999999999999999964

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.36  E-value=7e-07  Score=80.46  Aligned_cols=38  Identities=32%  Similarity=0.577  Sum_probs=33.7

Q ss_pred             eeeeEeeccccCCCCCCee-----eEEeecceEEEe-cCCCcEE
Q psy8443           5 RIRWFKFDECALEDHGCEH-----TCKNILGGYECS-CKIGYEL   42 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~~-----~C~n~~gsy~C~-C~~G~~l   42 (330)
                      +.+|.+|+||...++.|.+     +|+|+.++|+|. |++||+.
T Consensus        38 g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G   81 (634)
T 1yo8_A           38 GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRG   81 (634)
T ss_dssp             SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred             CCCccccccccCCCCcccCCccccceeeccCceecccCCCCccc
Confidence            4679999999987777976     799999999999 9999983

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.28  E-value=2.5e-07  Score=80.30  Aligned_cols=64  Identities=27%  Similarity=0.633  Sum_probs=38.2

Q ss_pred             ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccccccc--ccCCCCeeecCCceEeCCCCC
Q psy8443          12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKA--RDACGGILKHSNGTLTSPSFP   76 (330)
Q Consensus        12 deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~--~~~C~~~~~~~~g~~~sp~~p   76 (330)
                      |||...++.|.+.|+|++|+|.|.|++||++ .+++.|++..+.  ...|.....+..|.+.+...+
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~   66 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEE   66 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCT
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCCccceeeeccc
Confidence            5677666667777777777777777777776 567777543332  234444444555555554433

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.18  E-value=4.3e-07  Score=77.33  Aligned_cols=39  Identities=41%  Similarity=0.980  Sum_probs=27.1

Q ss_pred             eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||||. .++.|.|.|.|++|+|.|.|++||.|..|+++|.
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~   39 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK   39 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTSSCEE
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccc
Confidence            68998 5678999999999999999999999999999994

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.17  E-value=1.6e-06  Score=51.24  Aligned_cols=37  Identities=35%  Similarity=0.898  Sum_probs=31.4

Q ss_pred             eeccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      |||||... ..+|.+  +|+  +..++|.|.|++||+    |..|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence            79999863 247875  999  889999999999998    88994

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=98.17  E-value=5e-07  Score=74.51  Aligned_cols=42  Identities=43%  Similarity=0.842  Sum_probs=37.7

Q ss_pred             eeccccCC-CCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443          10 KFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        10 dideC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      |+|||... +++|+|.|.|+.|+|+|+|.+||.|..|+++|.+
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p   43 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP   43 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence            57999987 7899999999999999999999999999999954

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.13  E-value=8.9e-07  Score=64.67  Aligned_cols=47  Identities=32%  Similarity=0.615  Sum_probs=38.4

Q ss_pred             eeeeEe-eccc---cCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443           5 RIRWFK-FDEC---ALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         5 ~~~C~d-ideC---~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      +.+|.+ +++|   ...++.|.++|+|+.| +|+|.|++||.+..+|+.|.+
T Consensus        78 G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~  129 (142)
T 2c4f_L           78 GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP  129 (142)
T ss_dssp             STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred             CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence            345765 6775   4445678889999999 999999999999999999964

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.11  E-value=2.4e-06  Score=50.42  Aligned_cols=36  Identities=25%  Similarity=0.492  Sum_probs=29.2

Q ss_pred             EeeccccCCCCCCee--eEE-----eecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHGCEH--TCK-----NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~-----n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+||||.+  .+|.+  +|+     +..++|+|.|++||+    |+.|+
T Consensus         6 ~~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE   48 (55)
T 3u7u_G            6 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ   48 (55)
T ss_dssp             EECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred             ccCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence            68999986  46765  995     567899999999999    99994

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.07  E-value=3.2e-06  Score=53.18  Aligned_cols=38  Identities=29%  Similarity=0.595  Sum_probs=27.8

Q ss_pred             ccCccccCCCccc--ccccccCCceeeecc-CCeEEccCCC
Q psy8443         175 DKDECMTNNGGCQ--HECRNTIGSYICSCH-NGYTLLENGH  212 (330)
Q Consensus       175 ~~~eC~~~~~~C~--~~C~n~~gsy~C~C~-~G~~l~~~~~  212 (330)
                      |+|||......|.  +.|+|+.|+|.|.+. .||.+..++.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~   42 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE   42 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence            7899998877885  469999999999822 3554444443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.04  E-value=1.2e-06  Score=82.21  Aligned_cols=47  Identities=34%  Similarity=0.846  Sum_probs=41.0

Q ss_pred             eeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           4 LRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      .+.+|.|||||. .+..|.+.|+|+.|+|+|.|++||.+..++++|..
T Consensus       345 ~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~  391 (791)
T 3m0c_C          345 AQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA  391 (791)
T ss_dssp             TTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred             CCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence            467899999998 35689999999999999999999999889999953

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.03  E-value=1.9e-06  Score=57.46  Aligned_cols=37  Identities=19%  Similarity=0.704  Sum_probs=28.8

Q ss_pred             ccCccccCCCcccccccccC--CceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~--gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ++++|..++...+++|++..  ++|.|.|++||.    |..|+
T Consensus        47 ~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   85 (91)
T 1tpg_A           47 PVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   85 (91)
T ss_dssp             CEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             cCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence            67788876644456799987  999999999997    55664

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.02  E-value=2.7e-06  Score=71.33  Aligned_cols=47  Identities=38%  Similarity=0.701  Sum_probs=40.6

Q ss_pred             eeeeE-eeccccCC-CCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           5 RIRWF-KFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         5 ~~~C~-dideC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      +..|. |+|||... +++|.+.|+|+.|+|.|.|++||++..++..|.+
T Consensus        36 g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   84 (317)
T 3h5c_B           36 GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP   84 (317)
T ss_dssp             SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred             CCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccc
Confidence            44687 99999863 3689999999999999999999998888999954

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.00  E-value=1.8e-06  Score=52.21  Aligned_cols=38  Identities=29%  Similarity=0.565  Sum_probs=31.3

Q ss_pred             eeEeeccccCCCCCCe----eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           7 RWFKFDECALEDHGCE----HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         7 ~C~dideC~~~~~~C~----~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|.++|||..  .+|.    .+|+|+.++|.|.|++||++   |..|
T Consensus         7 ~~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C   48 (61)
T 2k2s_B            7 LSETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRI---SLDG   48 (61)
T ss_dssp             CTTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEE---EECS
T ss_pred             hcCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCcc---CCCC
Confidence            4789999986  4575    48999999999999999973   4567

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.82  E-value=4e-06  Score=66.85  Aligned_cols=40  Identities=10%  Similarity=-0.033  Sum_probs=33.5

Q ss_pred             eeeeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           5 RIRWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         5 ~~~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.+|.+++||+..  +|.+  +|++..++|+|.|++||+    |..|.
T Consensus        93 G~~c~~~~eC~s~--pC~ngG~C~~~~~sy~C~C~~Gf~----G~~Ce  134 (267)
T 4fbr_A           93 GARDKQNIVAVSI--KSNDGGKTLTGTTTYNGEGPIGFK----SEVTD  134 (267)
T ss_dssp             CCCSSCCEEEEEE--ECSSTTSEEEEEEEETTSCCEEEE----EEECC
T ss_pred             cCccccccccCCC--CCCCCCEEecCCccEEeeCCCCcc----ccCCC
Confidence            5678888899864  4654  999999999999999999    78885

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.81  E-value=1.1e-05  Score=44.14  Aligned_cols=32  Identities=34%  Similarity=0.716  Sum_probs=27.3

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      ++++|..++....++|++..++|.|.|++||.
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~   33 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE   33 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCc
Confidence            67899876655556899999999999999997

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.80  E-value=2.1e-05  Score=44.60  Aligned_cols=38  Identities=26%  Similarity=0.776  Sum_probs=30.4

Q ss_pred             EeeccccCC-CCCCee-eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALE-DHGCEH-TCKNIL--GGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~-~~~C~~-~C~n~~--gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ++|++|... ..+|.+ +|++..  ++|.|.|++||+    |..|+
T Consensus         1 ~~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce   42 (46)
T 1k36_A            1 VSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             CCEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             CccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence            378999762 246776 999865  699999999999    88994

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.80  E-value=4.4e-06  Score=77.75  Aligned_cols=47  Identities=34%  Similarity=0.799  Sum_probs=41.9

Q ss_pred             eeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443           4 LRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus         4 ~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      .+.+|.|||||.. +..|.+.|+|+.|+|+|.|++||++..++++|..
T Consensus       327 ~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~  373 (699)
T 1n7d_A          327 AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA  373 (699)
T ss_dssp             SSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred             CCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence            4778999999974 4679999999999999999999999999999953

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=97.72  E-value=5.2e-05  Score=54.74  Aligned_cols=38  Identities=37%  Similarity=0.941  Sum_probs=31.9

Q ss_pred             ee-EeeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           7 RW-FKFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         7 ~C-~dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +| .+++||...  +|.  .+|+|+.|+|+|.|++||+    |..|.
T Consensus        40 ~C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~   80 (135)
T 2vj3_A           40 RCEIDVNECVSN--PCQNDATCLDQIGEFQCICMPGYE----GVHCE   80 (135)
T ss_dssp             TSCEECCTTTTC--CCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             cccccCccCCCC--CCCCCCEEeCCCCCceeeCCCCCc----CCcce
Confidence            45 589999863  565  4999999999999999998    88884

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.69  E-value=2.3e-05  Score=57.30  Aligned_cols=40  Identities=28%  Similarity=0.815  Sum_probs=33.1

Q ss_pred             eeeeE-eeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           5 RIRWF-KFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         5 ~~~C~-dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.+|. |||||...  .|.  .+|+|+.|+|+|.|++||+    |..|+
T Consensus        90 G~~C~~~i~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~~c~  132 (143)
T 4d90_A           90 GIHCQHNINECEVE--PCKNGGICTDLVANYSCECPGEFM----GRNCQ  132 (143)
T ss_dssp             STTSCEECCTTTTC--CSCTTCEEEEETTEEEEECCTTCB----STTSC
T ss_pred             CCCcccCCCcCCCC--CCCCCCEeECCCCCeEeECCCCCc----cCCce
Confidence            34675 99999854  465  4999999999999999999    77884

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.67  E-value=2.2e-05  Score=71.97  Aligned_cols=41  Identities=34%  Similarity=0.934  Sum_probs=38.6

Q ss_pred             eeccccCCCCCCeeeEEeec-ceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ++|||...+++|.|.|.+++ |+|+|.|++||.|..|+++|.
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~  305 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCS  305 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence            68999987889999999999 999999999999999999994

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.57  E-value=2.1e-05  Score=66.82  Aligned_cols=40  Identities=35%  Similarity=0.904  Sum_probs=27.8

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +|||. .++.|++.|.|+.|+|.|.|++||.|..++++|..
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~   40 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA   40 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccc
Confidence            57898 67889999999999999999999999999999975

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.54  E-value=8.2e-05  Score=43.82  Aligned_cols=38  Identities=26%  Similarity=0.518  Sum_probs=30.5

Q ss_pred             cccCccccCCCcccccc-----cccCCceeeeccCCeEEccCCCCcc
Q psy8443         174 TDKDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       174 ~~~~eC~~~~~~C~~~C-----~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .+++||..++...+++|     ++..++|.|.|++||.    |..|+
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE   48 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ   48 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence            48899999988888889     5778899999999999    55564

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.52  E-value=4.6e-05  Score=56.97  Aligned_cols=41  Identities=37%  Similarity=0.831  Sum_probs=35.1

Q ss_pred             ccCccccCCCcc-cccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         175 DKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       175 ~~~eC~~~~~~C-~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |+|||... .+| .++|+|+.|+|+|.|++||.+..+++.|.+
T Consensus         2 dideC~~~-~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d   43 (162)
T 1uzk_A            2 DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (162)
T ss_dssp             CCCGGGST-TSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             ccccCCCC-CCCCCCEeECCCCCEEEeCCCCCeECCCCCcccC
Confidence            78999852 345 467999999999999999999999999975

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.51  E-value=2.1e-05  Score=63.08  Aligned_cols=41  Identities=32%  Similarity=0.797  Sum_probs=32.8

Q ss_pred             cccCccccCCCcccc--cccccCCceeeeccCCeEEccCCCCccc
Q psy8443         174 TDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       174 ~~~~eC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|+|||..+.+.|..  .|.|+.|+|.|.|++||.  .++..|.+
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d   45 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA   45 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCC
Confidence            489999988888974  599999999999999998  67888876

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=97.51  E-value=5.1e-05  Score=62.41  Aligned_cols=48  Identities=40%  Similarity=0.813  Sum_probs=41.3

Q ss_pred             ccCccccC-CCcccccccccCCceeeeccCCeEEccCCCCcccC---CCcce
Q psy8443         175 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG---GCKYE  222 (330)
Q Consensus       175 ~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~---~C~~~  222 (330)
                      +.|||..+ ++.|.+.|.|+.++|.|.|..||.|..+++.|.+.   .|+..
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~   52 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL   52 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCC
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccCcc
Confidence            46899988 89999999999999999999999999999999862   56643

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.47  E-value=3.4e-05  Score=46.57  Aligned_cols=34  Identities=32%  Similarity=0.771  Sum_probs=28.9

Q ss_pred             ecccCccccCCCccc--ccccccCCceeeeccCCeE
Q psy8443         173 FTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       173 ~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~  206 (330)
                      +.++|+|..++...+  ++|.++.++|.|.|++||.
T Consensus         8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~   43 (61)
T 2k2s_B            8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR   43 (61)
T ss_dssp             TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred             cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence            457899998775555  5799999999999999998

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.46  E-value=5.3e-05  Score=63.42  Aligned_cols=42  Identities=31%  Similarity=0.775  Sum_probs=37.4

Q ss_pred             eeccccCCCCCCeeeEEeecc--eEEEecCCCcEEcCCCCcccc
Q psy8443          10 KFDECALEDHGCEHTCKNILG--GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        10 dideC~~~~~~C~~~C~n~~g--sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      ..++|...+++|.+.|.+.++  +|.|.|+.||.|..|+++|.+
T Consensus       266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~  309 (318)
T 3sov_A          266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD  309 (318)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred             cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence            368998877899999999986  799999999999999999953

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.43  E-value=0.00011  Score=48.76  Aligned_cols=38  Identities=29%  Similarity=0.786  Sum_probs=30.8

Q ss_pred             ee--EeeccccCCCCCCee--eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443           7 RW--FKFDECALEDHGCEH--TCKNIL--GGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         7 ~C--~dideC~~~~~~C~~--~C~n~~--gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|  .++|+|..  .+|.+  +|+++.  ++|.|.|++||+    |+.|+
T Consensus        42 ~C~~~~~~~C~~--~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   85 (91)
T 1tpg_A           42 QCHSVPVKSCSE--PRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   85 (91)
T ss_dssp             BCCEECEEECSS--CCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             ccccCcCCcccC--CCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence            56  37899986  45765  899988  899999999998    88884

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.43  E-value=0.00013  Score=41.24  Aligned_cols=35  Identities=31%  Similarity=0.677  Sum_probs=27.2

Q ss_pred             ccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +||... ..+|.+  +|+  +..++|.|.|++||+    |..|+
T Consensus         1 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A            1 PGXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CCCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CCcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            366642 236765  898  778999999999999    88994

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.29  E-value=5.1e-06  Score=66.25  Aligned_cols=35  Identities=6%  Similarity=-0.047  Sum_probs=25.9

Q ss_pred             cccCccccCCCcccccccccCCceeeeccCCeEEc
Q psy8443         174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL  208 (330)
Q Consensus       174 ~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~  208 (330)
                      .+.+||...+..-..+|++...+|+|.|+.||+..
T Consensus        97 ~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~  131 (267)
T 4fbr_A           97 KQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSE  131 (267)
T ss_dssp             SCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred             ccccccCCCCCCCCCEEecCCccEEeeCCCCcccc
Confidence            34557777665556778888888888888888853

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.25  E-value=0.00022  Score=41.89  Aligned_cols=37  Identities=32%  Similarity=0.897  Sum_probs=28.2

Q ss_pred             ccCccccC-CCcc--ccccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTN-NGGC--QHECR--NTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~-~~~C--~~~C~--n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ++++|..+ ..+|  .++|+  +..++|.|.|++||.    |..|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence            57888875 2345  45799  899999999999997    55664

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.09  E-value=0.00027  Score=43.21  Aligned_cols=34  Identities=26%  Similarity=0.559  Sum_probs=27.6

Q ss_pred             eccccCCCCCCee--eEEe-----ecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEH--TCKN-----ILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n-----~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      -|+|..  .+|.+  +|++     ..++|.|.|++||+    |..|+
T Consensus         6 c~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce   46 (63)
T 1hae_A            6 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             CCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             cCCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence            367865  45765  9997     57899999999999    89994

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.90  E-value=0.00052  Score=40.12  Aligned_cols=35  Identities=43%  Similarity=1.023  Sum_probs=26.5

Q ss_pred             ccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+|... ..+|.+  +|+  +..++|.|.|++||+    |..|+
T Consensus         4 ~~C~~~~~~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce   43 (53)
T 1nql_B            4 SECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ   43 (53)
T ss_dssp             EECCSTTCCEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             cccCCCCCCCCCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence            345432 346765  898  667899999999999    99994

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.89  E-value=0.0029  Score=58.08  Aligned_cols=43  Identities=30%  Similarity=0.815  Sum_probs=40.0

Q ss_pred             ccCccccCCCcccccccccC-CceeeeccCCeEEccCCCCcccC
Q psy8443         175 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKEG  217 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~~~~~C~~~  217 (330)
                      ..++|..+++.|++.|.++. ++|.|.|+.||.|..++++|...
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~  307 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP  307 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence            67999999999999999999 99999999999999999999864

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.83  E-value=0.0013  Score=37.03  Aligned_cols=34  Identities=24%  Similarity=0.516  Sum_probs=23.9

Q ss_pred             ccccC---CCccccccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443         178 ECMTN---NGGCQHECR--NTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       178 eC~~~---~~~C~~~C~--n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|..+   +....++|+  +..++|.|.|++||.    |..|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            45543   333345687  788999999999998    55564

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.81  E-value=0.00059  Score=57.02  Aligned_cols=41  Identities=29%  Similarity=0.686  Sum_probs=36.6

Q ss_pred             ccCccccC---CCcccccccccC------CceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTN---NGGCQHECRNTI------GSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~---~~~C~~~C~n~~------gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ..++|..+   ++.|++.|.++.      ++|.|.|+.||.|..|+++|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            56889987   888999999875      689999999999999999995

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.74  E-value=0.00065  Score=56.77  Aligned_cols=43  Identities=44%  Similarity=0.970  Sum_probs=37.5

Q ss_pred             cCccccCCCcccccccccCC--ceeeeccCCeEEccCCCCcccCC
Q psy8443         176 KDECMTNNGGCQHECRNTIG--SYICSCHNGYTLLENGHDCKEGG  218 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~g--sy~C~C~~G~~l~~~~~~C~~~~  218 (330)
                      .++|..+++.|++.|....+  +|.|.|+.||.|..+++.|.+..
T Consensus       267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~  311 (318)
T 3sov_A          267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN  311 (318)
T ss_dssp             CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred             ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence            58898888999999998876  79999999999999999998643

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.61  E-value=0.00096  Score=37.67  Aligned_cols=36  Identities=25%  Similarity=0.609  Sum_probs=25.6

Q ss_pred             ccCcccc---CCCcccccccccC--CceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMT---NNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~---~~~~C~~~C~n~~--gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ++++|..   ++... ++|.+..  ++|.|.|++||+    |..|+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCc----cCCCC
Confidence            4677876   44333 4788644  789999999998    55564

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.60  E-value=0.0015  Score=48.60  Aligned_cols=40  Identities=28%  Similarity=0.635  Sum_probs=29.7

Q ss_pred             eccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccccccccCCC
Q psy8443          11 FDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGSVKARDACG   60 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~   60 (330)
                      .++|..  .+|.+  +|.+..++|+|.|++||+    |..|+.    .++|.
T Consensus       119 ~~~c~~--~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~----~~~c~  160 (162)
T 1g1s_A          119 TASCQD--MSCSKQGECLETIGNYTCSCYPGFY----GPECEY----VRDDD  160 (162)
T ss_dssp             ECCCCT--TGGGGSEEEEECSSSEEEEECTTEE----STTSCE----ECC--
T ss_pred             eCCCcC--CCCCCCCEEecCCCCceEeCCCCCc----Cccccc----CcccC
Confidence            456664  45754  999999999999999999    889943    44564

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.58  E-value=0.00089  Score=61.35  Aligned_cols=42  Identities=29%  Similarity=0.739  Sum_probs=38.5

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      ..++|..+++.|++.|.++.++|.|.|+.||.|..++++|..
T Consensus       577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~~  618 (619)
T 3s94_A          577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV  618 (619)
T ss_dssp             CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred             ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence            468899889999999999999999999999999999999963

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.49  E-value=0.0012  Score=60.48  Aligned_cols=42  Identities=31%  Similarity=0.789  Sum_probs=37.2

Q ss_pred             eeccccCCCCCCeeeEEeec--ceEEEecCCCcEEcCCCCcccc
Q psy8443          10 KFDECALEDHGCEHTCKNIL--GGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        10 dideC~~~~~~C~~~C~n~~--gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      ..++|...+++|.|.|.+.+  ++|+|.|++||.|..|+++|..
T Consensus       271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence            46899887789999999987  4799999999999999999953

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=96.29  E-value=0.0024  Score=58.59  Aligned_cols=52  Identities=25%  Similarity=0.694  Sum_probs=39.0

Q ss_pred             CCCCcccCceEEEec---ccCccccCC-Ccccc--cccccCCceeeec-cCCeEEccCCCCccc-CCC
Q psy8443         160 DNSVQKSGFSAFFFT---DKDECMTNN-GGCQH--ECRNTIGSYICSC-HNGYTLLENGHDCKE-GGC  219 (330)
Q Consensus       160 ~~~~~~~Gf~~~~~~---~~~eC~~~~-~~C~~--~C~n~~gsy~C~C-~~G~~l~~~~~~C~~-~~C  219 (330)
                      ..+.+..||.+..|.   ++++|...+ ..|.+  +|.+    ..|.| ++||.    |..|+. ..|
T Consensus       545 g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~----G~~Ce~C~~C  604 (690)
T 3fcs_B          545 GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY----GDTCEKCPTC  604 (690)
T ss_dssp             TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB----STTSCBCTTS
T ss_pred             CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc----CCCcCcCCCC
Confidence            667788999988876   578888644 45653  5865    29999 99998    999986 455

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.21  E-value=0.0025  Score=38.85  Aligned_cols=37  Identities=27%  Similarity=0.517  Sum_probs=27.9

Q ss_pred             ccCccccCCCcccccccc-----cCCceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTNNGGCQHECRN-----TIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n-----~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .-++|..++...+++|++     ..++|.|.|++||.    |..|+
T Consensus         5 ~c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce   46 (63)
T 1hae_A            5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             ccCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence            346777666555667986     67899999999998    55664

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.11  E-value=0.0045  Score=35.96  Aligned_cols=27  Identities=37%  Similarity=0.846  Sum_probs=22.0

Q ss_pred             CCee--eEEe----ecceEEEecCCCcEEcCCCCccc
Q psy8443          20 GCEH--TCKN----ILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        20 ~C~~--~C~n----~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +|.+  +|++    ..++|.|.|++||+    |..|+
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce   47 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence            4654  8987    36789999999999    88994

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.34  E-value=0.0098  Score=53.25  Aligned_cols=34  Identities=35%  Similarity=0.971  Sum_probs=29.8

Q ss_pred             eccccCCCCCCee--eEEe-ecceEEEecC-CCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEH--TCKN-ILGGYECSCK-IGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n-~~gsy~C~C~-~G~~l~~dg~~C~   50 (330)
                      +|+|..  .+|.+  +|++ ..++|.|.|+ +||+    |..|+
T Consensus         2 ~d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (553)
T 1q4g_A            2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (553)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CCcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence            689986  46775  9999 8999999999 9999    99995

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=95.27  E-value=0.0057  Score=50.97  Aligned_cols=34  Identities=29%  Similarity=0.829  Sum_probs=22.3

Q ss_pred             eeccccCCC--CCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALED--HGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~~--~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+++|....  ..|.+  .|.+   .|.|.|++||.    |..|.
T Consensus       142 ~~~~C~~~~C~~~C~~~G~C~~---~~~C~C~~G~~----G~~C~  179 (324)
T 2ygq_A          142 FFKTCQQAECPGGCRNGGFCNE---RRICECPDGFH----GPHCE  179 (324)
T ss_dssp             EEEEECCCCCSSCCCSSCEECT---TSCEECCTTEE----SSSSC
T ss_pred             ccccccCCCCCCCCCCCCEECC---CCeEECCCCCc----CCCCC
Confidence            345554321  24543  6754   58999999999    78885

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.96  E-value=0.02  Score=34.01  Aligned_cols=27  Identities=37%  Similarity=0.846  Sum_probs=21.4

Q ss_pred             CCee--eEEe----ecceEEEecCCCcEEcCCCCccc
Q psy8443          20 GCEH--TCKN----ILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        20 ~C~~--~C~n----~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|.+  +|..    ..++|.|.|++||+    |..|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence            4554  8883    45689999999999    99994

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.96  E-value=0.019  Score=51.59  Aligned_cols=34  Identities=26%  Similarity=0.903  Sum_probs=28.5

Q ss_pred             eccccCCCCCCee--eEEee-cceEEEecC-CCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEH--TCKNI-LGGYECSCK-IGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n~-~gsy~C~C~-~G~~l~~dg~~C~   50 (330)
                      ||+|..  .+|.+  +|++. .++|.|.|+ +||+    |+.|+
T Consensus         1 vd~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   38 (587)
T 3nt1_A            1 ANPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (587)
T ss_dssp             CCTTTT--CCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CCCCCC--CCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence            589986  46765  99964 599999999 9999    99995

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=94.46  E-value=0.0073  Score=45.18  Aligned_cols=46  Identities=28%  Similarity=0.601  Sum_probs=35.3

Q ss_pred             CCCCcccCceEEEec-ccCccccCCCccc--cccccc-CCceeeeccCCeE
Q psy8443         160 DNSVQKSGFSAFFFT-DKDECMTNNGGCQ--HECRNT-IGSYICSCHNGYT  206 (330)
Q Consensus       160 ~~~~~~~Gf~~~~~~-~~~eC~~~~~~C~--~~C~n~-~gsy~C~C~~G~~  206 (330)
                      .......||.+..+. ++++|.. ..+|.  ++|+++ .++|.|.|++||.
T Consensus       114 ~~C~C~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~  163 (169)
T 2vj2_A          114 WQCLCETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYS  163 (169)
T ss_dssp             TCCEECTTEETTTTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred             CEEeCCCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence            345567888877776 7889986 23454  569997 8999999999998

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.09  E-value=0.028  Score=41.58  Aligned_cols=37  Identities=38%  Similarity=0.821  Sum_probs=28.0

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .++|...+....++|.++.++|.|.|++||.    |..|+.
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~  155 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEY  155 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCE
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCc----Cccccc
Confidence            4567665544456799999999999999999    556653

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=93.96  E-value=0.036  Score=46.13  Aligned_cols=44  Identities=25%  Similarity=0.736  Sum_probs=0.0

Q ss_pred             CCCcccCceEEEecccCccccCCCccc--ccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         161 NSVQKSGFSAFFFTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       161 ~~~~~~Gf~~~~~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .+.+..||.+..|. .++|.   ..|.  ++|.+   .+.|.|++||.    |..|+
T Consensus       262 ~C~C~~G~~G~~C~-~~~C~---~~C~~~g~C~~---~~~C~C~~G~~----G~~C~  307 (324)
T 2ygq_A          262 KCKCSKGYQGDLCS-KPVCE---PGCGAHGTCHE---PNKCQCQEGWH----GRHCN  307 (324)
T ss_dssp             ---------------------------------------------------------
T ss_pred             EEECCCCCcCCCCc-CCCCC---CCCCCCCEECC---CCEeECCCCCc----CCCCC
Confidence            45677888887775 45665   2343  45775   58999999998    44554

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=93.44  E-value=0.059  Score=31.26  Aligned_cols=24  Identities=33%  Similarity=0.988  Sum_probs=19.5

Q ss_pred             cccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443         188 HECR--NTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       188 ~~C~--n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ++|.  +..++|.|.|++||.    |..|+
T Consensus        18 G~C~~~~~~~~~~C~C~~Gyt----G~~Ce   43 (53)
T 1nql_B           18 GVCMYIEALDKYACNCVVGYI----GERCQ   43 (53)
T ss_dssp             CEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             eEEeeecCCCCEEEecCCCCc----CCCCC
Confidence            4687  778899999999999    55554

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=93.34  E-value=0.11  Score=38.43  Aligned_cols=28  Identities=36%  Similarity=1.060  Sum_probs=24.3

Q ss_pred             CCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ..|..  .|.+..++|.|.|++||.    |..|.
T Consensus       125 ~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~  154 (164)
T 3cfw_A          125 WSCSGHGECVEIINNYTCNCDVGYY----GPQCQ  154 (164)
T ss_dssp             TSSCSSEEEEEETTEEEEEECTTCB----SSSSC
T ss_pred             CcCCCCCeecccCCCceeeeCCCcc----ccccc
Confidence            46753  999999999999999998    88894

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=92.89  E-value=0.1  Score=47.97  Aligned_cols=31  Identities=32%  Similarity=0.756  Sum_probs=23.0

Q ss_pred             ccccCCC--CCCee--eEEeecceEEEecC----CCcEEcCCCCccc
Q psy8443          12 DECALED--HGCEH--TCKNILGGYECSCK----IGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~~--~~C~~--~C~n~~gsy~C~C~----~G~~l~~dg~~C~   50 (330)
                      ++|...+  ..|.+  .|.+    ++|.|+    +||.    |..|+
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~----G~~Ce  522 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT----GKYCE  522 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB----STTSC
T ss_pred             CcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee----CCCcC
Confidence            6787533  24764  8874    689999    9998    88894

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=92.55  E-value=0.17  Score=43.84  Aligned_cols=21  Identities=33%  Similarity=0.971  Sum_probs=15.2

Q ss_pred             cccccCCceeeeccCCeEEccCCCCccc
Q psy8443         189 ECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       189 ~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|.+..+   |.|++||.    |..|+.
T Consensus       300 ~C~~~~~---C~C~~G~~----G~~Ce~  320 (423)
T 2gy5_A          300 MCDRFQG---CLCSPGWQ----GLQCER  320 (423)
T ss_dssp             EEETTTE---EECCTTCB----STTSCB
T ss_pred             EecCCCc---eECCCCCc----CCCCcc
Confidence            5766644   99999998    556654

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.27  E-value=0.087  Score=47.19  Aligned_cols=37  Identities=27%  Similarity=0.669  Sum_probs=31.4

Q ss_pred             cCccccCCCcccccccc-cCCceeeecc-CCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n-~~gsy~C~C~-~G~~l~~~~~~C~~  216 (330)
                      +|+|..+++..+++|.+ ..++|.|.|+ .||.    |..|+.
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI   40 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence            57899888776778999 8999999999 9999    667754

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=91.83  E-value=0.093  Score=33.03  Aligned_cols=36  Identities=36%  Similarity=0.768  Sum_probs=24.8

Q ss_pred             eccccCC-CCCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALE-DHGCEH-TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~-~~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .++|... .+.|.+ +|.  +..+.+.|.|++||+    |..|+
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCH   76 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCC
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----ccccc
Confidence            4567622 346766 895  334689999999999    88883

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=90.84  E-value=0.18  Score=28.69  Aligned_cols=37  Identities=35%  Similarity=0.740  Sum_probs=26.4

Q ss_pred             eeccccCC-CCCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALE-DHGCEH-TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~-~~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ..++|... ...|.+ +|.  ...+.+.|.|++||+    |..|+
T Consensus         8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe   48 (50)
T 2rnl_A            8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG   48 (50)
T ss_dssp             CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred             cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence            34567632 245766 887  445689999999999    88883

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.69  E-value=0.16  Score=28.90  Aligned_cols=28  Identities=32%  Similarity=0.708  Sum_probs=21.7

Q ss_pred             CCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH-TCK--NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|-+ +|.  ...+.+.|.|++||+    |..|+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe   44 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGYI----GARCE   44 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCcc----cCCCC
Confidence            34554 775  446789999999999    99994

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=90.60  E-value=0.15  Score=29.29  Aligned_cols=25  Identities=28%  Similarity=0.874  Sum_probs=18.8

Q ss_pred             cccccc----cCCceeeeccCCeEEccCCCCcc
Q psy8443         187 QHECRN----TIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       187 ~~~C~n----~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +++|++    ..++|.|.|++||.    |..|+
T Consensus        19 GGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce   47 (52)
T 3ca7_A           19 DAHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (52)
T ss_dssp             TCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred             CCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence            346875    46789999999999    55554

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=90.54  E-value=0.04  Score=48.43  Aligned_cols=10  Identities=40%  Similarity=1.062  Sum_probs=0.0

Q ss_pred             eeeeccCCeE
Q psy8443         197 YICSCHNGYT  206 (330)
Q Consensus       197 y~C~C~~G~~  206 (330)
                      +.|.|++||.
T Consensus       440 ~~C~C~~G~~  449 (463)
T 2wg3_C          440 NKCLCKKGYL  449 (463)
T ss_dssp             ----------
T ss_pred             CEEECCCCcc
Confidence            5777777776

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.37  E-value=0.17  Score=45.56  Aligned_cols=37  Identities=27%  Similarity=0.775  Sum_probs=30.1

Q ss_pred             cCccccCCCcccccccc-cCCceeeecc-CCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n-~~gsy~C~C~-~G~~l~~~~~~C~~  216 (330)
                      +++|..+++..+++|.+ ..++|.|.|+ +||.    |..|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence            47898887777788996 5689999999 9998    777764

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=90.33  E-value=0.23  Score=28.24  Aligned_cols=28  Identities=36%  Similarity=0.783  Sum_probs=22.2

Q ss_pred             CCCee-eEEee--cceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH-TCKNI--LGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~-~C~n~--~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|.+ +|.-.  .+.+.|.|++||+    |..|+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe   44 (50)
T 3e50_C           14 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCE   44 (50)
T ss_pred             CcccCCEEeeccCCCCeEEECCCCCc----ccCCC
Confidence            45765 88764  3679999999999    88994

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=89.07  E-value=0.26  Score=32.67  Aligned_cols=47  Identities=19%  Similarity=0.379  Sum_probs=36.6

Q ss_pred             ceeeeeEeecc-ccCCCCCCee--eEEeec-ceEEEecCCCcE-EcCCCCcc
Q psy8443           3 KLRIRWFKFDE-CALEDHGCEH--TCKNIL-GGYECSCKIGYE-LHSDGKIC   49 (330)
Q Consensus         3 ~~~~~C~dide-C~~~~~~C~~--~C~n~~-gsy~C~C~~G~~-l~~dg~~C   49 (330)
                      +++..|..++. |+.++++|+.  .|..+. .--.|.|.+||. .--+|..|
T Consensus        42 ~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC   93 (105)
T 1n1i_A           42 EVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFC   93 (105)
T ss_dssp             ECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEE
T ss_pred             ccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEE
Confidence            57788999999 8888889986  999985 788999999975 11245555

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=87.66  E-value=0.27  Score=32.35  Aligned_cols=47  Identities=19%  Similarity=0.410  Sum_probs=35.6

Q ss_pred             ceeeeeEee--ccccCCCCCCee--eEEeec-----ceEEEecCCCcE-EcCCCCcc
Q psy8443           3 KLRIRWFKF--DECALEDHGCEH--TCKNIL-----GGYECSCKIGYE-LHSDGKIC   49 (330)
Q Consensus         3 ~~~~~C~di--deC~~~~~~C~~--~C~n~~-----gsy~C~C~~G~~-l~~dg~~C   49 (330)
                      ++++.|..+  +.|+..+++|+.  .|..+.     +...|.|.+||. ...+|.-|
T Consensus        36 gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~   92 (99)
T 1ob1_C           36 QEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFC   92 (99)
T ss_dssp             EETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTEE
T ss_pred             cCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEEe
Confidence            577889888  589988889986  999885     678999999985 22344444

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=86.79  E-value=0.32  Score=28.72  Aligned_cols=25  Identities=28%  Similarity=0.889  Sum_probs=18.5

Q ss_pred             ccccc--c--cCCceeeeccCCeEEccCCCCcc
Q psy8443         187 QHECR--N--TIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       187 ~~~C~--n--~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +++|.  .  ..++|.|.|++||.    |..|+
T Consensus        19 GGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce   47 (58)
T 3ltf_D           19 DAHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (58)
T ss_dssp             SCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred             CCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence            34676  3  45689999999999    56664

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=86.57  E-value=0.45  Score=33.09  Aligned_cols=27  Identities=26%  Similarity=0.667  Sum_probs=21.3

Q ss_pred             CCee--eEEeec--ceE-EEecCCCcEEcCCCCccc
Q psy8443          20 GCEH--TCKNIL--GGY-ECSCKIGYELHSDGKICV   50 (330)
Q Consensus        20 ~C~~--~C~n~~--gsy-~C~C~~G~~l~~dg~~C~   50 (330)
                      +|.+  +|++..  .+| .|.|++||+    |..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE   33 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEE----STTSC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCC----Ccccc
Confidence            3543  899884  555 999999999    89994

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=82.02  E-value=6.4  Score=33.71  Aligned_cols=37  Identities=19%  Similarity=0.596  Sum_probs=28.5

Q ss_pred             cCccccCCCcccccccccCCceeeeccC-CeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHN-GYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~-G~~l~~~~~~C~~  216 (330)
                      .+.|...++...++|.+..++|.|.|+. ||.    +..|..
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~  222 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND  222 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence            3567766655567799999999999996 997    666754

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=81.87  E-value=1.1  Score=38.61  Aligned_cols=38  Identities=21%  Similarity=0.721  Sum_probs=29.8

Q ss_pred             eeE-eeccccCCCCCCee--eEEeecceEEEecCC-CcEEcCCCCccc
Q psy8443           7 RWF-KFDECALEDHGCEH--TCKNILGGYECSCKI-GYELHSDGKICV   50 (330)
Q Consensus         7 ~C~-dideC~~~~~~C~~--~C~n~~gsy~C~C~~-G~~l~~dg~~C~   50 (330)
                      .|. ..++|..  .+|.+  .|++..++|.|.|+. ||.    |..|.
T Consensus       180 gC~~~~~~C~~--~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~  221 (410)
T 3asi_A          180 GCEGPSTTCQE--DSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN  221 (410)
T ss_dssp             SCCCCSSCCCT--TSSSTTCEEEECSSSEEEECTTTSEE----STTSC
T ss_pred             CCCCCCCCccc--ccCCCCCEecCCCCCceEeccCCccc----CCCCC
Confidence            353 3467765  46765  999999999999996 998    89994

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=81.15  E-value=0.92  Score=33.25  Aligned_cols=34  Identities=32%  Similarity=0.825  Sum_probs=25.0

Q ss_pred             ccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         178 ECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       178 eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .|..+...-.++|.+..++|.|.|++||.    |..|+
T Consensus       121 ~~~~~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~  154 (164)
T 3cfw_A          121 SCQPWSCSGHGECVEIINNYTCNCDVGYY----GPQCQ  154 (164)
T ss_dssp             CCCTTSSCSSEEEEEETTEEEEEECTTCB----SSSSC
T ss_pred             CCCCCcCCCCCeecccCCCceeeeCCCcc----ccccc
Confidence            35443333345799999999999999998    55665

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=80.87  E-value=0.97  Score=41.58  Aligned_cols=30  Identities=27%  Similarity=0.693  Sum_probs=20.8

Q ss_pred             cccCCC--CCCee--eEEeecceEEEecC------CCcEEcCCCCccc
Q psy8443          13 ECALED--HGCEH--TCKNILGGYECSCK------IGYELHSDGKICV   50 (330)
Q Consensus        13 eC~~~~--~~C~~--~C~n~~gsy~C~C~------~G~~l~~dg~~C~   50 (330)
                      +|...+  ..|.+  .|.+  |  +|.|+      +||.    |..|.
T Consensus       474 ~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~~----G~~Ce  513 (687)
T 3k6s_B          474 SCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLIY----GQYCE  513 (687)
T ss_dssp             TTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCEE----STTSC
T ss_pred             CCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCcc----ccccc
Confidence            465432  23754  8873  3  89999      9999    88894

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	330
d2qqma3	108	b.23.1.1 (A:156-263) Mannose-binding protein assoc	2e-22
d2qqma3	108	b.23.1.1 (A:156-263) Mannose-binding protein assoc	9e-22
d1szba1	121	b.23.1.1 (A:3-123) Mannose-binding protein associa	3e-21
d1szba1	121	b.23.1.1 (A:3-123) Mannose-binding protein associa	1e-16
d1nzia1	117	b.23.1.1 (A:1-117) Complement C1S component {Human	7e-21
d1nzia1	117	b.23.1.1 (A:1-117) Complement C1S component {Human	4e-16
d1nt0a2	114	b.23.1.1 (A:165-278) Mannose-binding protein assoc	1e-18
d1nt0a2	114	b.23.1.1 (A:165-278) Mannose-binding protein assoc	3e-18
d1sfpa_	111	b.23.1.1 (A:) Acidic seminal fluid protein (ASFP)	4e-13
d1sfpa_	111	b.23.1.1 (A:) Acidic seminal fluid protein (ASFP)	2e-12
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	1e-12
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	8e-11
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	2e-12
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	9e-11
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	2e-12
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	1e-10
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	2e-12
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	8e-11
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	3e-12
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	2e-11
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	3e-12
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	5e-10
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	4e-12
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	1e-10
d1sppb_	112	b.23.1.1 (B:) Major seminal plasma glycoprotein PS	5e-12
d1sppb_	112	b.23.1.1 (B:) Major seminal plasma glycoprotein PS	1e-09
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	1e-11
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	2e-09
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	1e-11
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	1e-09
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	1e-11
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	5e-10
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	2e-11
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	2e-09
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-11
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	3e-09
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	4e-11
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	7e-10
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	8e-11
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	5e-09
d1sppa_	109	b.23.1.1 (A:) Major seminal plasma glycoprotein PS	2e-10
d1sppa_	109	b.23.1.1 (A:) Major seminal plasma glycoprotein PS	6e-10
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	2e-10
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	2e-07
d1ijqa2	50	g.3.11.1 (A:643-692) Low density lipoprotein (LDL)	2e-10
d1ijqa2	50	g.3.11.1 (A:643-692) Low density lipoprotein (LDL)	5e-09
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	5e-10
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	5e-08
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	1e-09
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	1e-07
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	9e-06
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-04
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	3e-04
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	0.001
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	8e-04
d1emoa2	39	g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sa	0.001
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.001

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (218), Expect = 2e-22
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)

Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYD 281
           GVIK+P  P+ YP+  EC +         I L F+ F+LEP         C YD + ++D
Sbjct: 1   GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60

Query: 282 GDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
           G       +GR+CG K P  I + S  L M+F +D+++ ++GF A ++
Sbjct: 61  GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYS 108

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 9e-22
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSS--CEYDNLTVFS 125
           G + SP FP+ Y  +  C + + AP    I L F  FD+E ++       C YD L ++ 
Sbjct: 1   GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60

Query: 126 KIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
              D     G +CG K P  I S    L + F++D+++ K GFSA +
Sbjct: 61  GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANY 107

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (210), Expect = 3e-21
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 226 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSP 285
             G + +P  P  Y + +E  W  T  PG+R++L F  F+LE    C YD V +  G   
Sbjct: 9   VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKV 68

Query: 286 DSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQR--KGFIATHTT 330
            +   G+        P      +  + L + F+SD S ++   GF A +  
Sbjct: 69  LATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 119

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-16
 Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 66  SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
             G L SP FP  Y  ++   W + APP YR+ L FTHFD+E ++     CEYD + + S
Sbjct: 9   VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSS 64

Query: 126 KIGDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQK--SGFSAFFFT 174
                    G                S G++L I F SD S +K  +GF AF+  
Sbjct: 65  GAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 119

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 7e-21
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
           G I +PN+P  YPS+ E  W      G+ I L F   ++E  + CAYD V +  GD+ + 
Sbjct: 6   GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEG 65

Query: 288 LTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRK--GFIATHTT 330
              G+        P         N+L ++FKSD S + +  GF A +  
Sbjct: 66  RLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 114

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 4e-16
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 68  GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
           G + SP++P  Y       W+I  P  Y I L FTH DIE       +C YD++ + S  
Sbjct: 6   GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE----LSENCAYDSVQIISGD 61

Query: 128 GDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQK--SGFSAFF 172
            +  +  G    +              N L++ F SD S ++  +GF+A++
Sbjct: 62  TEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYY 112

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.1 bits (191), Expect = 1e-18
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 59  CGG-ILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
           C G +    +G L+SP +P  Y K  +C + I     + I+L+F        +  ++ C 
Sbjct: 1   CSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMH-PEAQCP 59

Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT 174
           YD+L +        +  G FCG  LPP I ++ N + I F +D S   +G+   + +
Sbjct: 60  YDSLKIQ----TDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.3 bits (189), Expect = 3e-18
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ---EFELEPHQTCAYDHVVMY 280
           T  +G + +P +P  YP    C ++     G  I L F    + E+ P   C YD + + 
Sbjct: 7   TGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQ 66

Query: 281 DGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
                       FCG  LP  I T SN++ + F +D S    G+   +T+
Sbjct: 67  TDKREYG----PFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Length = 111

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.7 bits (151), Expect = 4e-13
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 59  CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
           CGGILK  +G + +      Y     C+W I  PP+Y + ++  +  +  N       + 
Sbjct: 7   CGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIID- 60

Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
                    G                   S G+ + +++  +     S +   +F D
Sbjct: 61  ---------GLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 108

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Length = 111

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.1 bits (147), Expect = 2e-12
 Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 11/115 (9%)

Query: 215 KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAY 274
           +   C   +   +GVI T      Y  K  C+W     P + +++  Q         C  
Sbjct: 3   RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYL----QLNCNK 53

Query: 275 DHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
           + + + DG     +      G        +  + + + +  +       +   + 
Sbjct: 54  ESLEIIDGLPGSPVLGKICEGS--LMDYRSSGSIMTVKYIREPEHPASFYEVLYF 106

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (144), Expect = 1e-12
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           TD +EC+         C NT GSYIC C   + L      C
Sbjct: 1   TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (130), Expect = 8e-11
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          +EC          C N  G Y C C   +EL+     CV
Sbjct: 4  NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV 42

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (143), Expect = 2e-12
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           C  +NG C   C     S +CSC  GYTL +NG  C 
Sbjct: 3   CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI 39

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (131), Expect = 9e-11
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVK 54
          C+L++  C+  C        CSC  GY L  +GK C+ +  
Sbjct: 3  CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 43

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (143), Expect = 2e-12
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           C  +NGGC H C   +G   CSC  GY L ++   C  
Sbjct: 2   CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 39

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 1e-10
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVK 54
          C+L++ GC H C   +G   CSC  GY+L  D   C  +VK
Sbjct: 2  CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 42

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (142), Expect = 2e-12
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           DEC  +   C   C N  G Y C C  G+ L  +   CK
Sbjct: 2   DEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 39

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (131), Expect = 8e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          DEC  +   C   C N+ GGY+C C+ G++L    K C
Sbjct: 2  DECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 38

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.3 bits (141), Expect = 3e-12
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           C  +NGGC   CR       CSC +GY L ++   C  
Sbjct: 1   CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.0 bits (135), Expect = 2e-11
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKH 65
          C+L++ GC+  C+       CSC  GY L  D K CV + +    CG   + 
Sbjct: 1  CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF--PCGKFTQG 50

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (141), Expect = 3e-12
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           +EC+ NNGGC H C +    Y C C +G+ L+     C+
Sbjct: 3   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE 40

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 5e-10
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          +EC   + GC H C ++  GYEC C  G++L    + C
Sbjct: 3  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC 39

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (140), Expect = 4e-12
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 177 DECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
           DEC    G    C H C N +G + CSC  GY L  N   C E
Sbjct: 2   DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (129), Expect = 1e-10
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 12 DECAL---EDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC +   E   C+H C N LGG+ CSC+ GY LH + + C 
Sbjct: 2  DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 43

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Length = 112

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 59.6 bits (143), Expect = 5e-12
 Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 53  VKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLF 112
           +   D CG ++K ++G++++            C W I+  P  ++ +   + ++      
Sbjct: 3   INGPDECGRVIKDTSGSISNTDRQ-----KNLCTWTILMKPDQKVRMAIPYLNL------ 51

Query: 113 QSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
                            S  S G  C       + +  N + I+++  +    S F  +F
Sbjct: 52  ---ACGKEYVEVFDGLLSGPSYGKLCAGAAIVFLSTA-NTMTIKYNRISGNSSSPFLIYF 107

Query: 173 FTD 175
           +  
Sbjct: 108 YGS 110

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Length = 112

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 53.1 bits (126), Expect = 1e-09
 Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 11/113 (9%)

Query: 218 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
            C   I   +G I   +          C W     P  ++++         +  C  ++V
Sbjct: 8   ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYL----NLACGKEYV 58

Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
            ++DG        G+ C       + T +N + + +   +      F+     
Sbjct: 59  EVFDGLLSGPSY-GKLCAGAAIVFLST-ANTMTIKYNRISGNSSSPFLIYFYG 109

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (137), Expect = 1e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 175 DKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 214
           D DEC    G CQ  +C NT GS+ C C  GY L E+   C
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 12 DECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 49
          DEC      C+   C N  G ++C C  GY L+ D ++C
Sbjct: 4  DECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (136), Expect = 1e-11
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 177 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           +EC    +  C H C N IG Y CSC   Y L ++  +C 
Sbjct: 1   NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 40

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (122), Expect = 1e-09
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 12 DECA-LEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
          +EC    D  C H C N +GGY CSC   Y LH D K C
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (136), Expect = 1e-11
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 175 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 214
           D DEC  +   C+   C NT GSY C C  G+ L  N   C
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 5e-10
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICV 50
          DEC  +   C    C N  G Y C C  G++L  +   C+
Sbjct: 3  DECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.1 bits (135), Expect = 2e-11
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 177 DECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCK 215
           DEC T+ G    C H C N +G Y CSC  GY L +N H C 
Sbjct: 2   DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.7 bits (121), Expect = 2e-09
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 12 DECALEDHG---CEHTCKNILGGYECSCKIGYELHSDGKICVG 51
          DEC         C+H C N LGGY CSC++GY LH +   C  
Sbjct: 2  DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSA 44

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 2e-11
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)

Query: 175 DKDECMTNNGGC--------QHECRNTIGSYICSCHNGYTLLENGHDCK 215
           D DEC + +           QH C N +G Y CSC  GY L E+ H C+
Sbjct: 3   DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 3e-09
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query: 12 DECALEDHGC--------EHTCKNILGGYECSCKIGYELHSDGKIC 49
          DECA              +H C N +GGY CSC+ GYEL  D   C
Sbjct: 5  DECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (133), Expect = 4e-11
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216
           C+  NGGC+  C +  G    C CH GY+LL +G  C  
Sbjct: 2   CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 7e-10
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 14 CALEDHGCEHTCKNILGG-YECSCKIGYELHSDGKICVGSVKARDACGGI 62
          C  E+ GCE  C +  G    C C  GY L +DG  C  +V+    CG I
Sbjct: 2  CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY--PCGKI 49

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 8e-11
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216
           C   NG C+  C+N+     +CSC  GY L EN   C+ 
Sbjct: 3   CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 41

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (118), Expect = 5e-09
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 14 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVGSVKARDACGGI 62
          C +++  CE  CKN       CSC  GY L  + K C  +V     CG +
Sbjct: 3  CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF--PCGRV 50

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Length = 109

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 55.4 bits (132), Expect = 2e-10
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 16/118 (13%)

Query: 58  ACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
           ACGG L    GT+ +   P        C+W +   P+Y++ ++    ++     +     
Sbjct: 5   ACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNLTCGKEY----- 54

Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
                V    G             L  +     + + +++  D+    S +   F  D
Sbjct: 55  -----VEVLEGAPGSKSLGKFCEGLSILN-RGSSGMTVKYKRDSGHPASPYEIIFLRD 106

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Length = 109

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 53.9 bits (128), Expect = 6e-10
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 12/112 (10%)

Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 278
           C   +T   G I T   P       EC+W     P +++ +         + TC  ++V 
Sbjct: 6   CGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTL----NLTCGKEYVE 56

Query: 279 MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
           + +G              +    +  GS+ + + +K D+      +      
Sbjct: 57  VLEGAPGSKS---LGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLR 105

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (128), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 214
           D DEC  N G C   C N  G++ C C     L  + G DC
Sbjct: 1   DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 2e-07
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYEL-HSDGKIC 49
          DEC      C   C N+ G +EC C     L    G  C
Sbjct: 3  DECE-NGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (128), Expect = 2e-10
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 177 DECMTNNGGCQHEC------RNTIGSYICSCHNGYTLLENGHDC 214
           +    +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 5   ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 5e-09
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 6/45 (13%)

Query: 12 DECALEDHGCEHTC------KNILGGYECSCKIGYELHSDGKICV 50
          +   L + GC++ C            + C+C  G  L  D + C+
Sbjct: 5  ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 5e-10
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
            D DEC   +     +C NT GSY C C  GY L   G++C
Sbjct: 3   VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 5e-08
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
          DEC   D      C N  G Y C C  GY L   G  CV
Sbjct: 6  DECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECV 42

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (122), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 174 TDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTL-LENGHDC 214
           TD DEC  +   C   +C NT G + C C  GY        +C
Sbjct: 1   TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 1e-07
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYEL-HSDGKICV 50
          DEC +    C    C N  G +EC C  GYE      K C+
Sbjct: 4  DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 9e-06
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)

Query: 175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 214
           D DEC      C+H  +C NT+GS+ C C  GYT    G  C
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
          DEC+L  + CEH   C N LG +EC C  GY 
Sbjct: 4  DECSLGANPCEHAGKCINTLGSFECQCLQGYT 35

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 179 CMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDC 214
           C  N   C    ECR+    + C C   YT   NG  C
Sbjct: 2   CANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQC 37

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 14 CALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50
          CA   H C     C++   G+ C C   Y    +G+ CV
Sbjct: 2  CANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCV 38

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 8e-04
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 10/43 (23%)

Query: 175 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           D D+C +N   NGG    C++ I SY C C  G+     G +C
Sbjct: 2   DGDQCESNPCLNGGS---CKDDINSYECWCPFGFE----GKNC 37

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (77), Expect = 0.001
 Identities = 14/30 (46%), Positives = 23/30 (76%)

Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYE 41
          DEC++ +     TCKN++GG+EC+C+ G+E
Sbjct: 2  DECSVGNPCGNGTCKNVIGGFECTCEEGFE 31

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 10/43 (23%)

Query: 175 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
           D D+C ++   NGG    C++ + SYIC C   +     G +C
Sbjct: 1   DGDQCASSPCQNGGS---CKDQLQSYICFCLPAFE----GRNC 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	330
d2qqma3	108	Mannose-binding protein associated serine protease	99.96
d1nt0a2	114	Mannose-binding protein associated serine protease	99.95
d1nzia1	117	Complement C1S component {Human (Homo sapiens) [Ta	99.95
d1szba1	121	Mannose-binding protein associated serine protease	99.94
d1sppb_	112	Major seminal plasma glycoprotein PSP-II {Pig (Sus	99.92
d1sppa_	109	Major seminal plasma glycoprotein PSP-I {Pig (Sus	99.91
d1sfpa_	111	Acidic seminal fluid protein (ASFP) {Cow (Bos taur	99.9
d2qqma3	108	Mannose-binding protein associated serine protease	99.81
d1nt0a2	114	Mannose-binding protein associated serine protease	99.78
d1nzia1	117	Complement C1S component {Human (Homo sapiens) [Ta	99.74
d1szba1	121	Mannose-binding protein associated serine protease	99.73
d1sppb_	112	Major seminal plasma glycoprotein PSP-II {Pig (Sus	99.69
d1sppa_	109	Major seminal plasma glycoprotein PSP-I {Pig (Sus	99.65
d1sfpa_	111	Acidic seminal fluid protein (ASFP) {Cow (Bos taur	99.59
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1szba2	45	Mannose-binding protein associated serine protease	99.48
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	99.47
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	99.45
d1nt0a3	45	Mannose-binding protein associated serine protease	99.45
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	99.41
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	99.4
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	99.37
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1szba2	45	Mannose-binding protein associated serine protease	99.15
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.15
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	99.14
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	99.12
d1nt0a3	45	Mannose-binding protein associated serine protease	99.11
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	99.1
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	99.1
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	99.09
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	99.06
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	99.04
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	99.04
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	99.01
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.97
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.82
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.77
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.75
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.73
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.72
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.72
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.7
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.68
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	98.65
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.63
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.42
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.36
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.32
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.25
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.25
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.23
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.11
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.1
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.02
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.02
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.01
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.87
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.85
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.81
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.79
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.48
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.4
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.32
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.24
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.21
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.2
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.14
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	96.99
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.51
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	96.26
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.22
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.12
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	95.87
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	95.87
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.14
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	93.27
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	93.0
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	92.23
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.54
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	90.83
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	86.1

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-29  Score=175.86  Aligned_cols=102  Identities=36%  Similarity=0.697  Sum_probs=96.4

Q ss_pred             ceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCC------CCCCCceEEEEcCCCCCccceeeccCCCCCCc
Q psy8443         228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYP  301 (330)
Q Consensus       228 g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~------~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~~  301 (330)
                      |+|+||+||..||++.+|.|+|+++++++|+|+|.+|+|+..      ..|..|+|+|++|......++++|||...|..
T Consensus         1 G~i~SP~yP~~Y~~~~~C~w~I~~p~~~~I~l~f~~f~l~~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~Cg~~~p~~   80 (108)
T d2qqma3           1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGR   80 (108)
T ss_dssp             EEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEEEEECTTCCCCE
T ss_pred             CEEeCCCCCCCCCCCCeEEEEEEeCCCceeeeEEEEEEeecccccccCCCccccEEEEEeccccCCccccEEeeccCCCC
Confidence            789999999999999999999999999999999999999874      34889999999999888889999999999999


Q ss_pred             EEecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443         302 IITGSNQLYMMFKSDASVQRKGFIATHT  329 (330)
Q Consensus       302 ~~s~~~~~~v~f~s~~~~~~~GF~~~y~  329 (330)
                      ++|++|.|+|+|+||.+.+++||+|.|+
T Consensus        81 ~~S~~n~l~i~F~Sd~~~~~~GF~~~yt  108 (108)
T d2qqma3          81 IRSSSGILSMVFYTDSAIAKEGFSANYS  108 (108)
T ss_dssp             EEECSSEEEEEEECCSSCCCCEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCCCCCEEEEEC
Confidence            9999999999999999999999999996

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.4e-27  Score=168.55  Aligned_cols=108  Identities=31%  Similarity=0.603  Sum_probs=94.6

Q ss_pred             Ccce-eecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEE-EEeeCCC--CCCCCceEEEEcCCCCCccceeecc
Q psy8443         219 CKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ-EFELEPH--QTCAYDHVVMYDGDSPDSLTLGRFC  294 (330)
Q Consensus       219 C~~~-~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~-~~~l~~~--~~C~~d~l~i~~g~~~~~~~~~~~c  294 (330)
                      |++. +++.+|.|.||+||..||++.+|.|+|++|++++|+|+|. .|+|+..  ..|..|+|+|++|.    ..+.++|
T Consensus         1 Cgg~~~~~~~G~i~SP~yP~~Y~~~~~C~w~I~~p~g~~i~l~F~~~f~le~~~~~~c~~d~l~v~~~~----~~~~~~C   76 (114)
T d1nt0a2           1 CSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK----REYGPFC   76 (114)
T ss_dssp             CEEEEECSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC----C--CEEEEECSS----CEEEEEC
T ss_pred             CcCCcCcCCCEEEECCCCCCCCCCCCeEEEEEEeCCCCceeeEEeeeeccccccccccccceeeeeeec----cceeccc
Confidence            5664 5688999999999999999999999999999999999995 5899764  45889999999974    4678999


Q ss_pred             CCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         295 GIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       295 g~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      |...|..++|++|.|+|+|+||.+..++||+|+|+|
T Consensus        77 g~~~p~~~~S~~n~l~i~F~Sd~~~~~~GF~~~y~s  112 (114)
T d1nt0a2          77 GKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS  112 (114)
T ss_dssp             BSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred             CCcCCCCeEecCCEEEEEEEECCCCCCCCEEEEEEE
Confidence            999999999999999999999999999999999986

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-27  Score=168.93  Aligned_cols=105  Identities=31%  Similarity=0.490  Sum_probs=93.1

Q ss_pred             CcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCCC----c
Q psy8443         226 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPY----P  301 (330)
Q Consensus       226 ~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~~----~  301 (330)
                      ..|.|+||+||..||++++|.|.|+++++++|.|+|.+|+||....|..|+|+|++|......++.++||...+.    .
T Consensus         4 ~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~l~f~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~~~~~~~~~~~~~   83 (117)
T d1nzia1           4 MYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEE   83 (117)
T ss_dssp             SEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC---CCEEECSEECCCCSSCCCSEE
T ss_pred             cEEEEeCCCCCCCCCCCCcEEEEEEcCCCCcEEEEEEeeeEeeecccccceeEEecCCCCCCceeeeecCCCCCCcccce
Confidence            469999999999999999999999999999999999999999988999999999999988888999999987553    4


Q ss_pred             EEecCCEEEEEEEeCCCCCC--CCeEEEEeC
Q psy8443         302 IITGSNQLYMMFKSDASVQR--KGFIATHTT  330 (330)
Q Consensus       302 ~~s~~~~~~v~f~s~~~~~~--~GF~~~y~~  330 (330)
                      ++|++|.|+|+|+||.+..+  +||+|+|+|
T Consensus        84 ~~s~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  114 (117)
T d1nzia1          84 FQVPYNKLQVIFKSDFSNEERFTGFAAYYVA  114 (117)
T ss_dssp             EEESSSEEEEEEEECSCCTTCCCEEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCCCCCCCEEEEEEE
Confidence            78999999999999876554  699999986

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.3e-27  Score=168.73  Aligned_cols=108  Identities=28%  Similarity=0.443  Sum_probs=95.1

Q ss_pred             eecC-cceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCC--
Q psy8443         223 ITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLP--  299 (330)
Q Consensus       223 ~~~~-~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~--  299 (330)
                      .+++ .|.|+||+||..||++.+|.|+|+++++++|.|+|.+|+||....|..|+|+|++|.......++++|+...+  
T Consensus         5 ~~~~~~G~i~SP~yP~~Yp~~~~C~W~I~~p~g~~I~l~f~~fdle~~~~C~~D~l~i~dg~~~~~~~~g~~~~~~~~~~   84 (121)
T d1szba1           5 WPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAP   84 (121)
T ss_dssp             CCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSSSEEEEECSBTTTTCSSSC
T ss_pred             CCCCCCeEEeCCCCCCCCCCCCeEEEEEEeCCCceeEEEeeeeeeeeeccccccceeeecCCccccceeccccCCCcCCC
Confidence            3444 8999999999999999999999999999999999999999998899999999999987777777788876532  


Q ss_pred             --CcEEecCCEEEEEEEeCCCCC--CCCeEEEEeC
Q psy8443         300 --YPIITGSNQLYMMFKSDASVQ--RKGFIATHTT  330 (330)
Q Consensus       300 --~~~~s~~~~~~v~f~s~~~~~--~~GF~~~y~~  330 (330)
                        ..++|++|.|+|+|+||.+..  ++||+|.|+|
T Consensus        85 ~~~~~~S~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  119 (121)
T d1szba1          85 GKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA  119 (121)
T ss_dssp             TTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred             CCceEEEcCCEEEEEEEECCCCccCCCCEEEEEEE
Confidence              368999999999999987554  5799999986

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.92  E-value=3.2e-25  Score=155.03  Aligned_cols=102  Identities=16%  Similarity=0.414  Sum_probs=92.9

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++...|.|.||+||..|     |.|+|+++++++|+|+|.+|+++    |..|+|+||||. ....+++++||.
T Consensus         7 ~~CGg~l~~~~G~i~SP~~P~~~-----C~W~I~~p~~~~I~l~f~~f~~~----C~~d~l~I~dg~-~~~~~l~~~Cg~   76 (112)
T d1sppb_           7 DECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLA----CGKEYVEVFDGL-LSGPSYGKLCAG   76 (112)
T ss_dssp             GGTTEEECCSEEEEECCSSCCSE-----EEEEEECCTTCEEEEEEEEEECC----BTTEEEEEESSS-TTSCEEEEESEE
T ss_pred             CcCCCEEeCCcceEeCCCCCCCc-----eEEEEecCCcEEEEEEEEehhcc----cccceeEEEecc-CcceeeeeecCC
Confidence            57899999999999999999765     99999999999999999999986    778999999997 456788999997


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHT  329 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~  329 (330)
                      .. ..++|++|.|+|+|++|....++||+|.|.
T Consensus        77 ~~-~~~~S~sn~l~v~f~s~~~~~~~GF~~~y~  108 (112)
T d1sppb_          77 AA-IVFLSTANTMTIKYNRISGNSSSPFLIYFY  108 (112)
T ss_dssp             EE-EEEECSSSEEEEEEEESSCSCCCCCEEEEE
T ss_pred             CC-ccccccccEEEEEEEECCCCCCCCEEEEEE
Confidence            54 579999999999999999999999999996

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.91  E-value=2.3e-24  Score=150.20  Aligned_cols=102  Identities=24%  Similarity=0.449  Sum_probs=91.4

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++...|+|.||+||     +.+|.|+|++|++++|+|+|..|+++    |..|+|+||+|... ...+.++||.
T Consensus         4 ~~Cgg~l~~~~G~i~Sp~yP-----~~~C~W~I~~p~g~~I~l~f~~f~~~----c~~d~l~i~~g~~~-~~~~~~~c~~   73 (109)
T d1sppa_           4 HACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNLT----CGKEYVEVLEGAPG-SKSLGKFCEG   73 (109)
T ss_dssp             CSSCEEEECSEEEEECCCSS-----CSEEEEEEECCTTSEEEEEEEEEECC----TTTEEEEEESSSTT-SCEEEEESEE
T ss_pred             ccCCCEEeCCCEEEeCCCCC-----CCcEEEEEEEccCceeEEEEeccccc----cceeeeeeecCCCc-cceeeeecCC
Confidence            35899999999999999998     35899999999999999999999986    67899999999754 5667899986


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                        +..++|++|.|+|+|+||....++||+|.|++
T Consensus        74 --~~~~~s~~n~~~i~F~Sd~~~~~~GF~~~y~~  105 (109)
T d1sppa_          74 --LSILNRGSSGMTVKYKRDSGHPASPYEIIFLR  105 (109)
T ss_dssp             --EEEEEEECTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred             --cccceeccceEEEEEEECCCCCCCCEEEEEEE
Confidence              45789999999999999999999999999974

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=2.5e-23  Score=145.53  Aligned_cols=103  Identities=19%  Similarity=0.381  Sum_probs=92.6

Q ss_pred             CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443         217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI  296 (330)
Q Consensus       217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~  296 (330)
                      ..|++.++...|.|.||     |+++.+|.|+|+++++++|.|+|.+|+++    |..|+|+|+||... ..++.++||.
T Consensus         5 ~~Cgg~lt~~~G~i~SP-----y~~~~~C~w~I~~p~g~~I~l~f~~f~~~----c~~d~v~i~dg~~~-~~~~~~~cg~   74 (111)
T d1sfpa_           5 TNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLN----CNKESLEIIDGLPG-SPVLGKICEG   74 (111)
T ss_dssp             CSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEECC----TTTEEEEEESSSTT-SCEEEEESEE
T ss_pred             cCCCcEEECCceeEcCC-----CCCCCcEEEEEEcCCCceeeEEEeecccc----cceeeeeecCCccc-eeeeccccCC
Confidence            67899999999999997     45688999999999999999999999985    67899999999754 5678999998


Q ss_pred             CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443         297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT  330 (330)
Q Consensus       297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~  330 (330)
                      .. ..++|++|.|+|+|+||....++||+|.|.+
T Consensus        75 ~~-~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~  107 (111)
T d1sfpa_          75 SL-MDYRSSGSIMTVKYIREPEHPASFYEVLYFQ  107 (111)
T ss_dssp             EE-EEEECSSSEEEEEEEECTTSCCCCCEEEEEE
T ss_pred             Cc-CCEEeCCCEEEEEEEECCCcCCCCEEEEEEE
Confidence            65 4799999999999999999999999999974

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-19  Score=125.72  Aligned_cols=106  Identities=33%  Similarity=0.601  Sum_probs=95.2

Q ss_pred             ceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCC--CCCCCCCceEEEEeCCCCCcccccccCCCCCCCc
Q psy8443          68 GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPV  145 (330)
Q Consensus        68 g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~--~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~  145 (330)
                      |.|+||+||..|+++..|.|.|+++++.+|+|.|..|+|+....  ....|..|+|+|+++.......++++||...|..
T Consensus         1 G~i~SP~yP~~Y~~~~~C~w~I~~p~~~~I~l~f~~f~l~~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~Cg~~~p~~   80 (108)
T d2qqma3           1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGR   80 (108)
T ss_dssp             EEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEEEEECTTCCCCE
T ss_pred             CEEeCCCCCCCCCCCCeEEEEEEeCCCceeeeEEEEEEeecccccccCCCccccEEEEEeccccCCccccEEeeccCCCC
Confidence            78999999999999999999999999999999999999976432  2346889999999998877788899999999999


Q ss_pred             EEccCCeEEEEEEeCCCCcccCceEEEe
Q psy8443         146 ILSEGNALRIEFHSDNSVQKSGFSAFFF  173 (330)
Q Consensus       146 ~~s~~~~~~~~f~~~~~~~~~Gf~~~~~  173 (330)
                      +.|.++.++++|+++.....+||++.|.
T Consensus        81 ~~S~~n~l~i~F~Sd~~~~~~GF~~~yt  108 (108)
T d2qqma3          81 IRSSSGILSMVFYTDSAIAKEGFSANYS  108 (108)
T ss_dssp             EEECSSEEEEEEECCSSCCCCEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCCCCCEEEEEC
Confidence            9999999999999999999999999873

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=1e-18  Score=122.39  Aligned_cols=110  Identities=32%  Similarity=0.708  Sum_probs=92.5

Q ss_pred             CCCe-eecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443          59 CGGI-LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV  136 (330)
Q Consensus        59 C~~~-~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~  136 (330)
                      |++. +....|.|.||+||..|+.+..|.|.|.+++|.+|+|.|. .|+++...  ...|..|+++|.++.    ...++
T Consensus         1 Cgg~~~~~~~G~i~SP~yP~~Y~~~~~C~w~I~~p~g~~i~l~F~~~f~le~~~--~~~c~~d~l~v~~~~----~~~~~   74 (114)
T d1nt0a2           1 CSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHP--EAQCPYDSLKIQTDK----REYGP   74 (114)
T ss_dssp             CEEEEECSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC------C--CEEEEECSS----CEEEE
T ss_pred             CcCCcCcCCCEEEECCCCCCCCCCCCeEEEEEEeCCCCceeeEEeeeecccccc--ccccccceeeeeeec----cceec
Confidence            6775 4578899999999999999999999999999999999995 57886543  346889999999863    45678


Q ss_pred             cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEec
Q psy8443         137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT  174 (330)
Q Consensus       137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~  174 (330)
                      +|+...|..+.+.++.++++|+++.....+||.+.|.+
T Consensus        75 ~Cg~~~p~~~~S~~n~l~i~F~Sd~~~~~~GF~~~y~s  112 (114)
T d1nt0a2          75 FCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS  112 (114)
T ss_dssp             ECBSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred             ccCCcCCCCeEecCCEEEEEEEECCCCCCCCEEEEEEE
Confidence            99999999999999999999999999999999999864

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.1e-18  Score=118.31  Aligned_cols=105  Identities=30%  Similarity=0.520  Sum_probs=89.8

Q ss_pred             CCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCC-
Q psy8443          66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPP-  144 (330)
Q Consensus        66 ~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~-  144 (330)
                      ..|.|+||+||..|+++..|.|.|++++|++|.|.|..|+|+...    .|..|+|.|+++........+++|+...+. 
T Consensus         4 ~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~l~f~~f~le~~~----~C~~D~l~I~dg~~~~~~~~~~~~~~~~~~~   79 (117)
T d1nzia1           4 MYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSE----NCAYDSVQIISGDTEEGRLCGQRSSNNPHSP   79 (117)
T ss_dssp             SEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEC---CCEEECSEECCCCSSCC
T ss_pred             cEEEEeCCCCCCCCCCCCcEEEEEEcCCCCcEEEEEEeeeEeeec----ccccceeEEecCCCCCCceeeeecCCCCCCc
Confidence            359999999999999999999999999999999999999998765    799999999999887777888999877653 


Q ss_pred             ---cEEccCCeEEEEEEeCCCCcc--cCceEEEec
Q psy8443         145 ---VILSEGNALRIEFHSDNSVQK--SGFSAFFFT  174 (330)
Q Consensus       145 ---~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~  174 (330)
                         .+.+.++.+++.|.++.....  .||.+.|.+
T Consensus        80 ~~~~~~s~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  114 (117)
T d1nzia1          80 IVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA  114 (117)
T ss_dssp             CSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEE
T ss_pred             ccceEEEcCCEEEEEEEECCCCCCCCCCEEEEEEE
Confidence               467999999999999866544  699999975

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.1e-17  Score=117.09  Aligned_cols=105  Identities=36%  Similarity=0.578  Sum_probs=90.2

Q ss_pred             CCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCC---
Q psy8443          66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKL---  142 (330)
Q Consensus        66 ~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~---  142 (330)
                      ..|.|.||+||..|+++..|.|.|.++++++|.|.|..|+|+...    .|..|+|.|+++........+..|+...   
T Consensus         9 ~~G~i~SP~yP~~Yp~~~~C~W~I~~p~g~~I~l~f~~fdle~~~----~C~~D~l~i~dg~~~~~~~~g~~~~~~~~~~   84 (121)
T d1szba1           9 VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSSGAKVLATLCGQESTDTERAP   84 (121)
T ss_dssp             CEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCT----TSCSSEEEEESSSSEEEEECSBTTTTCSSSC
T ss_pred             CCeEEeCCCCCCCCCCCCeEEEEEEeCCCceeEEEeeeeeeeeec----cccccceeeecCCccccceeccccCCCcCCC
Confidence            379999999999999999999999999999999999999998765    7999999999987765666677776653   


Q ss_pred             -CCcEEccCCeEEEEEEeCCCCc--ccCceEEEec
Q psy8443         143 -PPVILSEGNALRIEFHSDNSVQ--KSGFSAFFFT  174 (330)
Q Consensus       143 -~~~~~s~~~~~~~~f~~~~~~~--~~Gf~~~~~~  174 (330)
                       +..+.|.++.+++.|.++....  .+||.+.|.+
T Consensus        85 ~~~~~~S~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  119 (121)
T d1szba1          85 GKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA  119 (121)
T ss_dssp             TTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred             CCceEEEcCCEEEEEEEECCCCccCCCCEEEEEEE
Confidence             2368999999999999987554  5799999864

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.69  E-value=8.3e-17  Score=111.74  Aligned_cols=105  Identities=23%  Similarity=0.542  Sum_probs=92.5

Q ss_pred             cccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccc
Q psy8443          55 ARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQ  134 (330)
Q Consensus        55 ~~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~  134 (330)
                      ..+.|++.+....|.|.||+||..|     |.|.|+++++.+|+|.|..|+++        |..|+|+|+++.. ....+
T Consensus         5 ~~~~CGg~l~~~~G~i~SP~~P~~~-----C~W~I~~p~~~~I~l~f~~f~~~--------C~~d~l~I~dg~~-~~~~l   70 (112)
T d1sppb_           5 GPDECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLA--------CGKEYVEVFDGLL-SGPSY   70 (112)
T ss_dssp             GGGGTTEEECCSEEEEECCSSCCSE-----EEEEEECCTTCEEEEEEEEEECC--------BTTEEEEEESSST-TSCEE
T ss_pred             CCCcCCCEEeCCcceEeCCCCCCCc-----eEEEEecCCcEEEEEEEEehhcc--------cccceeEEEeccC-cceee
Confidence            4678999999999999999998765     99999999999999999999974        6779999999875 45678


Q ss_pred             cccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEec
Q psy8443         135 GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT  174 (330)
Q Consensus       135 ~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~  174 (330)
                      +++|+.. +..+.+.++.++++|+++.....+||.+.|..
T Consensus        71 ~~~Cg~~-~~~~~S~sn~l~v~f~s~~~~~~~GF~~~y~~  109 (112)
T d1sppb_          71 GKLCAGA-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYG  109 (112)
T ss_dssp             EEESEEE-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEE
T ss_pred             eeecCCC-CccccccccEEEEEEEECCCCCCCCEEEEEEE
Confidence            8999864 45789999999999999999999999999864

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.65  E-value=4.7e-16  Score=107.53  Aligned_cols=103  Identities=22%  Similarity=0.573  Sum_probs=90.2

Q ss_pred             cCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443          57 DACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV  136 (330)
Q Consensus        57 ~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~  136 (330)
                      ..|++.+....|.|.||+||     +..|.|.|+++++++|+|.|..|++        .|..|+|.|+++... ....++
T Consensus         4 ~~Cgg~l~~~~G~i~Sp~yP-----~~~C~W~I~~p~g~~I~l~f~~f~~--------~c~~d~l~i~~g~~~-~~~~~~   69 (109)
T d1sppa_           4 HACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNL--------TCGKEYVEVLEGAPG-SKSLGK   69 (109)
T ss_dssp             CSSCEEEECSEEEEECCCSS-----CSEEEEEEECCTTSEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEEE
T ss_pred             ccCCCEEeCCCEEEeCCCCC-----CCcEEEEEEEccCceeEEEEecccc--------ccceeeeeeecCCCc-cceeee
Confidence            45999999999999999998     3579999999999999999999987        466799999998654 455678


Q ss_pred             cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      +|+.  +..+.+.++.++++|+++.....+||.+.|.++
T Consensus        70 ~c~~--~~~~~s~~n~~~i~F~Sd~~~~~~GF~~~y~~~  106 (109)
T d1sppa_          70 FCEG--LSILNRGSSGMTVKYKRDSGHPASPYEIIFLRD  106 (109)
T ss_dssp             ESEE--EEEEEEECTTCEEEEEECTTCCCCCCEEEEEEE
T ss_pred             ecCC--cccceeccceEEEEEEECCCCCCCCEEEEEEEe
Confidence            9975  567889999999999999999999999999754

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.59  E-value=6.9e-15  Score=101.98  Aligned_cols=105  Identities=21%  Similarity=0.539  Sum_probs=91.3

Q ss_pred             ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443          56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG  135 (330)
Q Consensus        56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~  135 (330)
                      ...|++.+....|.|.||.     +++..|.|.|.+++|.+|.|.|..|++        .|..|++.|+++... ...+.
T Consensus         4 ~~~Cgg~lt~~~G~i~SPy-----~~~~~C~w~I~~p~g~~I~l~f~~f~~--------~c~~d~v~i~dg~~~-~~~~~   69 (111)
T d1sfpa_           4 NTNCGGILKEESGVIATYY-----GPKTNCVWTIQMPPEYHVRVSIQYLQL--------NCNKESLEIIDGLPG-SPVLG   69 (111)
T ss_dssp             ECSSCEEECCSEEEEECCC-----SSCSEEEEEEECCTTCEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEE
T ss_pred             ccCCCcEEECCceeEcCCC-----CCCCcEEEEEEcCCCceeeEEEeeccc--------ccceeeeeecCCccc-eeeec
Confidence            4679999999999999983     457899999999999999999999987        467799999998654 46678


Q ss_pred             ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443         136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD  175 (330)
Q Consensus       136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~  175 (330)
                      ++|+.. +..+.+.++.++++|+++.....+||++.|..+
T Consensus        70 ~~cg~~-~~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~  108 (111)
T d1sfpa_          70 KICEGS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD  108 (111)
T ss_dssp             EESEEE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred             cccCCC-cCCEEeCCCEEEEEEEECCCcCCCCEEEEEEEe
Confidence            899875 447899999999999999999999999999764

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.9e-15  Score=83.62  Aligned_cols=42  Identities=29%  Similarity=0.565  Sum_probs=38.4

Q ss_pred             EeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|||||+..+..|.+.|+|++|+|+|.|++||+|..+++.|+
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~   42 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV   42 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred             CCccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCccc
Confidence            489999987667888999999999999999999999999995

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-15  Score=83.22  Aligned_cols=41  Identities=32%  Similarity=0.770  Sum_probs=38.2

Q ss_pred             eeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      |||||+..++.|.+ +|+|++|||+|.|++||.+..+++.|+
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~Cv   42 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI   42 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCccC
Confidence            89999988888987 999999999999999999999999883

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.1e-15  Score=83.06  Aligned_cols=42  Identities=38%  Similarity=0.744  Sum_probs=37.0

Q ss_pred             eeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           7 RWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         7 ~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +|+|||||+..+..|.+.|+|++|||.|.|++||++  ++++|+
T Consensus         1 sCvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~   42 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECV   42 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEE--SSSCEE
T ss_pred             CCcceeccCCcCCCCCCEeECCCCCeEeECCCCccc--CCCccc
Confidence            589999999877778789999999999999999996  567784

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2e-14  Score=80.22  Aligned_cols=40  Identities=45%  Similarity=1.128  Sum_probs=36.5

Q ss_pred             eccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||||+..++   +|.+.|+|++|+|+|+|++||+|..|+++|+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~   43 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS   43 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCcc
Confidence            799987655   5888999999999999999999999999994

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2e-14  Score=83.65  Aligned_cols=42  Identities=48%  Similarity=1.092  Sum_probs=36.9

Q ss_pred             EeeccccCCCCC--------CeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHG--------CEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~--------C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +|||||...+..        |.|+|+|++|||+|.|++||+|..|+++|.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            699999876554        456899999999999999999999999993

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.9e-15  Score=80.81  Aligned_cols=41  Identities=34%  Similarity=0.853  Sum_probs=37.8

Q ss_pred             EeeccccCCCCCCe-eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           9 FKFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      .|||||+..++.|. ++|+|++|+|+|.|++||.+..++++|
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCcc
Confidence            59999998778886 599999999999999999999999998

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.8e-14  Score=78.51  Aligned_cols=39  Identities=38%  Similarity=0.974  Sum_probs=36.3

Q ss_pred             eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||||+. +++|.|.|+|++|+|+|.|++||+|..|+++|.
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEEECTTTCCEE
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCeECCCCCccc
Confidence            799975 678999999999999999999999999999994

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=2.7e-14  Score=79.70  Aligned_cols=40  Identities=48%  Similarity=1.095  Sum_probs=33.7

Q ss_pred             eccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||||+..++   .|.+.|+|++|||+|+|++||.|..|+++|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            799987654   4889999999999999999999999999993

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.3e-14  Score=77.61  Aligned_cols=41  Identities=37%  Similarity=0.761  Sum_probs=36.4

Q ss_pred             EeeccccCCCCCCee-eEEeecceEEEecCCCcEEc-CCCCcc
Q psy8443           9 FKFDECALEDHGCEH-TCKNILGGYECSCKIGYELH-SDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~-~dg~~C   49 (330)
                      .|||||+..+..|.+ +|+|++|||+|.|++||++. .+|+.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            489999988888877 99999999999999999976 467887

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.7e-14  Score=76.92  Aligned_cols=39  Identities=33%  Similarity=0.706  Sum_probs=33.4

Q ss_pred             eeccccCCCCCCeeeEEeecceEEEecCCCcEEcC-CCCcc
Q psy8443          10 KFDECALEDHGCEHTCKNILGGYECSCKIGYELHS-DGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~-dg~~C   49 (330)
                      |||||+. +++|++.|+|++|||+|.|++||+|.+ +++.|
T Consensus         1 DidEC~~-~~~C~~~C~N~~Gsy~C~C~~Gy~l~g~~~~~C   40 (40)
T d1dx5i3           1 DIDECEN-GGFCSGVCHNLPGTFECICGPDSALAGQIGTDC   40 (40)
T ss_dssp             ECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CccccCC-CcCccCEeeCCCCCeEeECCCCCeeCCCCCCCC
Confidence            8999986 588999999999999999999999764 45544

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.4e-13  Score=74.82  Aligned_cols=39  Identities=49%  Similarity=0.931  Sum_probs=35.1

Q ss_pred             ccccCC-CCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      |||+.. +++|.|.|+|++|+|+|.|++||+|..|+++|.
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            799853 468999999999999999999999999999993

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1e-13  Score=74.63  Aligned_cols=38  Identities=37%  Similarity=0.938  Sum_probs=35.8

Q ss_pred             eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +|||...+++|+|.|+|++|+|+|.|++||+|. |+++|
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~-d~~tC   39 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC   39 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE-TTTEE
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC-CCCcC
Confidence            799999889999999999999999999999996 88888

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.4e-12  Score=71.86  Aligned_cols=42  Identities=33%  Similarity=0.708  Sum_probs=39.1

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |+|||...+..|.+.|+|+.|+|.|.|++||.|..+++.|.|
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            799999988888889999999999999999999999999864

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=9.6e-12  Score=69.12  Aligned_cols=41  Identities=44%  Similarity=1.060  Sum_probs=37.0

Q ss_pred             cCccccCCC---cccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +|||...++   .|.+.|.|+.|+|.|.|++||.|..++++|.+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            689988765   57889999999999999999999999999975

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=4e-12  Score=69.41  Aligned_cols=40  Identities=43%  Similarity=0.755  Sum_probs=37.2

Q ss_pred             ccCccccCCCcccc-cccccCCceeeeccCCeEEccCCCCc
Q psy8443         175 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC  214 (330)
Q Consensus       175 ~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~~~~~C  214 (330)
                      |+|||...+..|.+ .|+|+.|||+|.|++||.+..+++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            68999999999876 69999999999999999999999887

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.1e-11  Score=67.16  Aligned_cols=40  Identities=35%  Similarity=0.814  Sum_probs=36.3

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      +|||.. ++.|.+.|.|+.|+|.|.|++||.|..++++|++
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEEECTTTCCEEE
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCeECCCCCcccc
Confidence            589974 6789999999999999999999999999999963

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.1e-11  Score=67.84  Aligned_cols=42  Identities=40%  Similarity=0.788  Sum_probs=36.5

Q ss_pred             ecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         173 FTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       173 ~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      ++|+|||..++..|.+.|+|+.|+|.|.|++||.+  +++.|.|
T Consensus         2 CvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~D   43 (43)
T d1emoa1           2 AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD   43 (43)
T ss_dssp             CCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEE--SSSCEEE
T ss_pred             CcceeccCCcCCCCCCEeECCCCCeEeECCCCccc--CCCcccC
Confidence            57999999888888889999999999999999997  4566653

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=6.3e-12  Score=68.97  Aligned_cols=41  Identities=46%  Similarity=0.911  Sum_probs=37.5

Q ss_pred             ccCccccCCCccc-ccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      |+|||...+..|. +.|+|+.|+|.|.|++||.+..+++.|+
T Consensus         2 DinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             ECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            8999999888886 6799999999999999999999998884

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.9e-11  Score=69.18  Aligned_cols=38  Identities=39%  Similarity=0.858  Sum_probs=35.3

Q ss_pred             ccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443          14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      |+..+++|+|.|+|++++|+|+|++||+|..|+++|+.
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCEECCCCCcccc
Confidence            67777899999999999999999999999999999964

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.11  E-value=1.4e-11  Score=68.44  Aligned_cols=40  Identities=50%  Similarity=1.081  Sum_probs=33.3

Q ss_pred             cCccccCCC---cccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         176 KDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       176 ~~eC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|||...++   .|.+.|+|+.|+|.|.|++||.|..|+++|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            689987754   4888999999999999999999999999985

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.7e-11  Score=68.86  Aligned_cols=39  Identities=33%  Similarity=0.869  Sum_probs=35.7

Q ss_pred             cccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443          13 ECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        13 eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      -|..++++|+|.|.|++|+|+|.|++||+|..|+++|+.
T Consensus         2 ~C~~~NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1           2 LCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             GGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ccCCCCCCcccEeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            367777899999999999999999999999999999964

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.2e-11  Score=65.94  Aligned_cols=38  Identities=47%  Similarity=1.066  Sum_probs=34.2

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|||||.....+|.+  +|+|+.|+|.|.|++||+    |..|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCc
Confidence            489999977788986  999999999999999999    88883

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.5e-11  Score=70.31  Aligned_cols=42  Identities=48%  Similarity=1.109  Sum_probs=36.7

Q ss_pred             cccCccccCCCc--------ccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         174 TDKDECMTNNGG--------CQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       174 ~~~~eC~~~~~~--------C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|+|||...+..        |.+.|+|+.|||.|.|++||.|..++++|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            489999877554        456799999999999999999999999996

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.3e-11  Score=68.11  Aligned_cols=40  Identities=25%  Similarity=0.600  Sum_probs=35.4

Q ss_pred             eccccCCCCCCeeeEE------eecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEHTCK------NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~~C~------n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .|||...+++|+|.|+      |+.|+|+|+|+.||+|..|+++|+
T Consensus         4 cneC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           4 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             TSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            4788888889999997      455899999999999999999994

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.9e-11  Score=64.61  Aligned_cols=39  Identities=38%  Similarity=0.884  Sum_probs=35.6

Q ss_pred             Ccccc-CCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         177 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       177 ~eC~~-~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      |||.. .++.|.+.|.|+.|+|.|.|++||.|..|+++|.
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            68875 4578999999999999999999999999999995

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=3.5e-11  Score=64.48  Aligned_cols=39  Identities=38%  Similarity=1.021  Sum_probs=35.9

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|||..+++.|.+.|.|+.|+|.|.|++||.|. |+++|+
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            589999999999999999999999999999995 778874

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.01  E-value=5.6e-11  Score=67.69  Aligned_cols=38  Identities=39%  Similarity=0.955  Sum_probs=35.3

Q ss_pred             ccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443          14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~   51 (330)
                      |..++++|+|.|+|++++|+|.|++||+|..|+++|++
T Consensus         1 C~~~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~   38 (51)
T d1kigl_           1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeEcCCCcEEeEcCCCCEECCCCCcccc
Confidence            56778899999999999999999999999999999964

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.2e-10  Score=63.70  Aligned_cols=40  Identities=35%  Similarity=0.751  Sum_probs=35.2

Q ss_pred             ccCccccCCCcccc-cccccCCceeeeccCCeEEc-cCCCCc
Q psy8443         175 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLL-ENGHDC  214 (330)
Q Consensus       175 ~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~-~~~~~C  214 (330)
                      |+|||...+..|.+ .|+|+.|||.|.|++||.+. .+++.|
T Consensus         2 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             cccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            89999999888876 79999999999999999986 466666

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=4.6e-11  Score=63.46  Aligned_cols=39  Identities=38%  Similarity=0.795  Sum_probs=32.6

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEcc-CCCCc
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE-NGHDC  214 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~-~~~~C  214 (330)
                      |+|||..+ ..|.+.|+|+.|+|.|.|++||.|.+ +++.|
T Consensus         1 DidEC~~~-~~C~~~C~N~~Gsy~C~C~~Gy~l~g~~~~~C   40 (40)
T d1dx5i3           1 DIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC   40 (40)
T ss_dssp             ECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CccccCCC-cCccCEeeCCCCCeEeECCCCCeeCCCCCCCC
Confidence            68999864 78999999999999999999999863 44443

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.2e-09  Score=63.31  Aligned_cols=39  Identities=36%  Similarity=0.785  Sum_probs=34.8

Q ss_pred             cccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443          13 ECALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        13 eC~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      .|..++++|+|.|+++++ +|+|+|++||.|..|+++|+.
T Consensus         2 ~C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   41 (57)
T d1rfnb_           2 TCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP   41 (57)
T ss_dssp             CTTGGGGGCSSEEEECTTSCEEEECCTTEEECTTSSSEEE
T ss_pred             ccCCCCCCcccEeeeCCCCCeEeECCCCCEECCCCCcccc
Confidence            477778899999999974 899999999999999999964

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.77  E-value=3e-09  Score=55.81  Aligned_cols=34  Identities=38%  Similarity=0.919  Sum_probs=30.4

Q ss_pred             eeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          10 KFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        10 dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |+|+|..  .+|.+  +|++..++|.|.|++||+    |+.|
T Consensus         1 D~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~~----G~~C   36 (37)
T d2c4fl1           1 DGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE----GRNC   36 (37)
T ss_dssp             TCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE----STTS
T ss_pred             CcccCCC--CCCCCCCEEECCCCCeEEECCCCCc----CCCC
Confidence            7899986  56765  999999999999999999    8888

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=4.3e-09  Score=59.95  Aligned_cols=38  Identities=39%  Similarity=0.915  Sum_probs=34.0

Q ss_pred             ccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443          14 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG   51 (330)
Q Consensus        14 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~   51 (330)
                      |..++++|+|.|.++++ +|+|+|+.||+|..|+++|+.
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   40 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCEECCCCCcccC
Confidence            66777899999999986 689999999999999999964

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4.5e-09  Score=55.87  Aligned_cols=35  Identities=40%  Similarity=0.991  Sum_probs=31.3

Q ss_pred             EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443           9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      +|+|+|..  .+|.+  +|++..++|+|.|++||+    |+.|
T Consensus         1 id~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~~----G~~C   37 (39)
T d1edmb_           1 VDGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNC   37 (39)
T ss_dssp             CCCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred             CccccCCC--CCCCCCcEEEcCCCCEEEECCCCCC----CCCC
Confidence            48999986  56876  999999999999999999    8888

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.8e-09  Score=60.08  Aligned_cols=38  Identities=39%  Similarity=0.910  Sum_probs=35.4

Q ss_pred             cccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|+++.++|.|.|+.||.|..|+++|..
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCEECCCCCcccc
Confidence            67788899999999999999999999999999999964

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=1.2e-09  Score=58.15  Aligned_cols=33  Identities=30%  Similarity=0.884  Sum_probs=27.8

Q ss_pred             CCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          16 LEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        16 ~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ...+.|..  .|+|++|+|.|.|++||.  +||..|+
T Consensus         4 ~~~~~C~~~A~C~Nt~Gsy~C~C~~Gy~--GdG~~C~   38 (40)
T d1gl4a2           4 NNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCV   38 (40)
T ss_dssp             HHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEE
T ss_pred             CCCCCCCCCCEeecCCCCeEeECCCCCc--CCCCEee
Confidence            33456654  899999999999999998  8899995

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.70  E-value=4.3e-09  Score=59.70  Aligned_cols=38  Identities=37%  Similarity=0.924  Sum_probs=35.4

Q ss_pred             cccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|+|+.++|.|.|++||.|..|+++|.+
T Consensus         1 C~~~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~   38 (51)
T d1kigl_           1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeEcCCCcEEeEcCCCCEECCCCCcccc
Confidence            56778999999999999999999999999999999975

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.1e-09  Score=59.66  Aligned_cols=39  Identities=41%  Similarity=0.945  Sum_probs=36.0

Q ss_pred             ccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443         178 ECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       178 eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|..+++.|++.|.|+.++|.|.|+.||.|..|+++|.+
T Consensus         2 ~C~~~NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1           2 LCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             GGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ccCCCCCCcccEeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            367788899999999999999999999999999999975

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.7e-09  Score=58.41  Aligned_cols=40  Identities=28%  Similarity=0.642  Sum_probs=35.9

Q ss_pred             cCccccCCCccccccc------ccCCceeeeccCCeEEccCCCCcc
Q psy8443         176 KDECMTNNGGCQHECR------NTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~------n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      -+||..+++.|++.|+      ++.++|.|.|+.||.|..|+++|.
T Consensus         4 cneC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           4 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             TSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            4788899999999996      667899999999999999999984

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.6e-08  Score=53.61  Aligned_cols=34  Identities=38%  Similarity=1.024  Sum_probs=30.2

Q ss_pred             eccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ||+|..  .+|.+  +|++..++|+|.|++||+    |+.|+
T Consensus         1 Id~C~~--~PC~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVS--NPCQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTT--CCCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcC--CCCCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            799986  46775  999999999999999999    99994

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.1e-07  Score=51.59  Aligned_cols=37  Identities=49%  Similarity=1.130  Sum_probs=31.0

Q ss_pred             ccCccccCCCcccc--cccccCCceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      |+|||...+.+|.+  +|+|+.++|.|.|++||.    |..|+
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce   40 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   40 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCc
Confidence            78999987777754  699999999999999998    55553

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.1e-07  Score=47.95  Aligned_cols=32  Identities=38%  Similarity=1.109  Sum_probs=28.0

Q ss_pred             ccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443          12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC   49 (330)
Q Consensus        12 deC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C   49 (330)
                      |+|..  .+|.+  +|++..++|+|.|++||+    |+.|
T Consensus         1 d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~~----G~~C   34 (35)
T d2vj3a3           1 DECAS--SPCLHNGRCLDKINEFQCECPTGFT----GHLC   34 (35)
T ss_dssp             CTTTT--CCSTTTCEEEECSSCEEEECCTTEE----SSSS
T ss_pred             CCCCC--CCCCCCcEEECCCCCeEEECCCCCC----CCCc
Confidence            68876  56766  999999999999999999    8888

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=54.61  Aligned_cols=39  Identities=38%  Similarity=0.965  Sum_probs=35.4

Q ss_pred             ccccCCCcccccccccC-CceeeeccCCeEEccCCCCccc
Q psy8443         178 ECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       178 eC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~~~~~C~~  216 (330)
                      .|..+++.|.+.|.++. ++|.|.|+.||.|..|+++|.+
T Consensus         2 ~C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   41 (57)
T d1rfnb_           2 TCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP   41 (57)
T ss_dssp             CTTGGGGGCSSEEEECTTSCEEEECCTTEEECTTSSSEEE
T ss_pred             ccCCCCCCcccEeeeCCCCCeEeECCCCCEECCCCCcccc
Confidence            57888899999999986 5899999999999999999975

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.3e-07  Score=52.65  Aligned_cols=38  Identities=42%  Similarity=1.147  Sum_probs=34.0

Q ss_pred             cccCCCcccccccccCC-ceeeeccCCeEEccCCCCccc
Q psy8443         179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE  216 (330)
Q Consensus       179 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~~~~~C~~  216 (330)
                      |..+++.|.+.|.++.+ +|.|.|+.||.|+.|+++|..
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   40 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCEECCCCCcccC
Confidence            66778899999999976 689999999999999999964

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2e-07  Score=49.20  Aligned_cols=33  Identities=45%  Similarity=1.118  Sum_probs=29.1

Q ss_pred             ccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      |||..  .+|.+  +|++..++|.|.|++||+    |+.|+
T Consensus         1 D~C~~--~PC~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCET--SPCQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTT--CCCCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCC--CCCCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            68886  56776  999999999999999999    99994

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.2e-07  Score=45.37  Aligned_cols=32  Identities=47%  Similarity=1.192  Sum_probs=28.0

Q ss_pred             eccccCCCCCCee-eEEeecceEEEecCCCcEEc
Q psy8443          11 FDECALEDHGCEH-TCKNILGGYECSCKIGYELH   43 (330)
Q Consensus        11 ideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~   43 (330)
                      .|||+.. ++|.+ +|.|.+|+|.|.|..||+..
T Consensus         1 tdECsig-npCGnGTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           1 TDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CCGGGTT-CSSSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CCccccC-CccCCceeeecccceEEeecCCcCCC
Confidence            3899875 68987 99999999999999999853

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.23  E-value=4.5e-07  Score=47.27  Aligned_cols=32  Identities=28%  Similarity=0.733  Sum_probs=29.2

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      |+|+|..++..-.++|++..++|.|.|++||.
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~   32 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFE   32 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEE
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCc
Confidence            68999988877778899999999999999998

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7.6e-07  Score=47.03  Aligned_cols=32  Identities=34%  Similarity=0.716  Sum_probs=29.1

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      |+|+|..++..-.++|++..++|.|.|++||.
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~   33 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE   33 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCC
Confidence            78999988877778899999999999999998

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.5e-06  Score=45.75  Aligned_cols=36  Identities=33%  Similarity=0.863  Sum_probs=30.4

Q ss_pred             cCccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|+|..++..-.++|++..++|.|.|++||.    |..|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            5889888776677899999999999999999    55553

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=9.2e-07  Score=48.84  Aligned_cols=35  Identities=37%  Similarity=0.973  Sum_probs=30.0

Q ss_pred             eeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          10 KFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        10 dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+|+|..  ++|.+ +|++..++|.|.|++||+    |+.|+
T Consensus         7 ~~~~C~~--~PC~nG~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           7 LEHPCAS--LCCGHGTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             SCCSSSS--TTTTSEEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCCcccC--CCCCCCEEECCCCCCeEeCCCCCc----CCCcc
Confidence            3678876  56766 999999999999999999    99995

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.3e-06  Score=45.10  Aligned_cols=33  Identities=27%  Similarity=0.862  Sum_probs=28.4

Q ss_pred             ccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|..  .+|.+  +|++..++|.|.|++||+    |+.|+
T Consensus         2 ~~C~~--~pC~ngg~C~~~~~~~~C~C~~g~~----G~~Ce   36 (39)
T d1g1ta2           2 AACTN--TSCSGHGECVETINNYTCKCDPGFS----GLKCE   36 (39)
T ss_dssp             CCCCT--TGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CcccC--CcCCCCcEEECCCCCEEEeCCCCCc----CcCcC
Confidence            56765  56875  999999999999999999    99994

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.01  E-value=6.6e-07  Score=47.33  Aligned_cols=35  Identities=37%  Similarity=0.927  Sum_probs=26.8

Q ss_pred             cccCCCcccc--cccccCCceeeeccCCeEEccCCCCcc
Q psy8443         179 CMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       179 C~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      |..+.+.|..  .|+|+.|+|.|.|++||.  +||..|.
T Consensus         2 C~~~~~~C~~~A~C~Nt~Gsy~C~C~~Gy~--GdG~~C~   38 (40)
T d1gl4a2           2 CANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCV   38 (40)
T ss_dssp             HHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEE
T ss_pred             ccCCCCCCCCCCEeecCCCCeEeECCCCCc--CCCCEee
Confidence            3344455654  599999999999999998  5677774

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5.1e-06  Score=44.02  Aligned_cols=33  Identities=33%  Similarity=0.889  Sum_probs=28.0

Q ss_pred             ccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|..  .+|.+  +|++..++|.|.|++||.    |..|+
T Consensus         2 ~~C~~--~pC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   36 (40)
T d1g1sa2           2 ASCQD--MSCSKQGECLETIGNYTCSCYPGFY----GPECE   36 (40)
T ss_dssp             CCCCT--TGGGGSEEEEECSSSEEEEECTTEE----STTSC
T ss_pred             CcccC--CcCCCCcEEECCCCCeEEeCCCCcc----CCCCC
Confidence            56665  56765  999999999999999999    99994

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=8.2e-06  Score=41.78  Aligned_cols=30  Identities=30%  Similarity=0.764  Sum_probs=26.5

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeE
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYT  206 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~  206 (330)
                      |+|..++..-.++|++..++|.|.|++||.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~   30 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFT   30 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEE
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCC
Confidence            578887777777899999999999999998

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=8e-06  Score=42.91  Aligned_cols=35  Identities=34%  Similarity=1.003  Sum_probs=29.2

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      |+|..++..-.++|++..++|.|.|++||.    |..|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            578887766677899999999999999999    55553

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.79  E-value=1.2e-05  Score=43.06  Aligned_cols=34  Identities=35%  Similarity=1.007  Sum_probs=28.4

Q ss_pred             eccccCCCCCCee--eEEee-cceEEEecCC-CcEEcCCCCccc
Q psy8443          11 FDECALEDHGCEH--TCKNI-LGGYECSCKI-GYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~~~~C~~--~C~n~-~gsy~C~C~~-G~~l~~dg~~C~   50 (330)
                      ||+|..  .+|.+  +|++. .++|.|.|++ ||+    |+.|+
T Consensus         2 id~C~~--nPC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CccCcC--CCCCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            789986  56775  99986 6899999986 999    99994

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.48  E-value=6.8e-05  Score=39.78  Aligned_cols=33  Identities=27%  Similarity=0.954  Sum_probs=26.9

Q ss_pred             ccccCCCCCCee--eEEee-cceEEEecC-CCcEEcCCCCccc
Q psy8443          12 DECALEDHGCEH--TCKNI-LGGYECSCK-IGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~~~~C~~--~C~n~-~gsy~C~C~-~G~~l~~dg~~C~   50 (330)
                      |+|..  .+|.+  +|++. .++|+|.|+ +||+    |+.|+
T Consensus         2 d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTT--CCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcC--CCCCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            67875  46776  99987 589999997 6999    99994

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.8e-05  Score=39.87  Aligned_cols=35  Identities=31%  Similarity=0.870  Sum_probs=27.6

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +.|..++...+++|++..++|.|.|++||.    |..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~----G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFS----GLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCc----CcCcC
Confidence            456666655567899999999999999999    55554

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=8e-05  Score=39.24  Aligned_cols=35  Identities=40%  Similarity=0.893  Sum_probs=27.5

Q ss_pred             CccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +.|..++...+++|++..++|.|.|++||.    |..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCcc----CCCCC
Confidence            456666655567899999999999999998    55554

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00011  Score=40.28  Aligned_cols=36  Identities=31%  Similarity=0.778  Sum_probs=29.2

Q ss_pred             ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443         175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ..++|..++..- ++|.+..++|.|.|++||.    |..|+
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCCCc----CCCcc
Confidence            567888877654 5799999999999999999    55553

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=5.9e-05  Score=44.53  Aligned_cols=36  Identities=28%  Similarity=0.588  Sum_probs=28.1

Q ss_pred             EeeccccCCCCCCee--eEE-----eecceEEEecCCCcEEcCCCCccc
Q psy8443           9 FKFDECALEDHGCEH--TCK-----NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus         9 ~dideC~~~~~~C~~--~C~-----n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+.+||..  ..|.+  +|.     +..++|.|.|++||+    |+.|+
T Consensus         4 ~~c~ec~~--~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce   46 (63)
T d1haea_           4 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             EECCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             ccCCCCcC--CcCCCCCEEeecccccCCCCEEeECCCCCC----CCCcC
Confidence            45678875  45655  885     456799999999999    99994

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00026  Score=37.46  Aligned_cols=28  Identities=32%  Similarity=0.916  Sum_probs=23.3

Q ss_pred             CCCee--eEEee--cceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH--TCKNI--LGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~--~C~n~--~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      .+|.+  +|++.  .++|+|.|++||+    |+.|+
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            46765  99986  4689999999999    99995

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00015  Score=35.70  Aligned_cols=30  Identities=40%  Similarity=1.071  Sum_probs=24.9

Q ss_pred             CccccCCCccc-ccccccCCceeeeccCCeEE
Q psy8443         177 DECMTNNGGCQ-HECRNTIGSYICSCHNGYTL  207 (330)
Q Consensus       177 ~eC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l  207 (330)
                      |||..++ +|. ++|.|..|+|.|.|..||..
T Consensus         2 dECsign-pCGnGTCtNviGgFec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGN-PCGNGTCKNVIGGFECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTC-SSSSSCEEECSSSEEECCSSSSCC
T ss_pred             CccccCC-ccCCceeeecccceEEeecCCcCC
Confidence            6787774 565 57999999999999999984

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=96.99  E-value=0.00028  Score=37.50  Aligned_cols=36  Identities=28%  Similarity=0.700  Sum_probs=29.0

Q ss_pred             cCccccCCCccccccccc-CCceeeeccC-CeEEccCCCCcc
Q psy8443         176 KDECMTNNGGCQHECRNT-IGSYICSCHN-GYTLLENGHDCK  215 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~-~gsy~C~C~~-G~~l~~~~~~C~  215 (330)
                      +|+|..++...+++|++. .++|.|.|++ ||.    |..|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            678888887777889875 6899999986 898    55564

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.0011  Score=34.96  Aligned_cols=35  Identities=31%  Similarity=0.858  Sum_probs=27.1

Q ss_pred             CccccCCCccccccccc-CCceeeecc-CCeEEccCCCCcc
Q psy8443         177 DECMTNNGGCQHECRNT-IGSYICSCH-NGYTLLENGHDCK  215 (330)
Q Consensus       177 ~eC~~~~~~C~~~C~n~-~gsy~C~C~-~G~~l~~~~~~C~  215 (330)
                      |+|..++....++|++. .++|+|.|+ .||.    |..|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            67887776667789875 689999997 5998    66664

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0032  Score=31.95  Aligned_cols=33  Identities=27%  Similarity=0.690  Sum_probs=26.4

Q ss_pred             eccccCCCCCCeeeEEee-cceEEEecCCCcEEcCC
Q psy8443          11 FDECALEDHGCEHTCKNI-LGGYECSCKIGYELHSD   45 (330)
Q Consensus        11 ideC~~~~~~C~~~C~n~-~gsy~C~C~~G~~l~~d   45 (330)
                      +|.|-.  ..|+..|.-. .++|.|.|..||...++
T Consensus         4 vDPCf~--~~CE~qCqP~~~~~Y~CiCaeGFaP~p~   37 (43)
T d1dx5i1           4 VDPCFR--ANCEYQCQPLDQTSYLCVCAEGFAPIPH   37 (43)
T ss_dssp             CCGGGG--CCCSSEEEECSSSCEEEECCTTEEEETT
T ss_pred             cccccC--CCcceeeeeCCCCcceEEeccccccCCC
Confidence            577764  4699999877 46999999999987665

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.22  E-value=0.0036  Score=34.98  Aligned_cols=28  Identities=39%  Similarity=0.960  Sum_probs=23.2

Q ss_pred             CCCee--eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH--TCKNIL--GGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~--~C~n~~--gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|.+  +|++..  .+|+|.|++||+    |..|+
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce   43 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCc----CCCCc
Confidence            46876  998654  589999999999    99994

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0016  Score=38.09  Aligned_cols=38  Identities=26%  Similarity=0.539  Sum_probs=28.9

Q ss_pred             cccCccccCCCcccccc-----cccCCceeeeccCCeEEccCCCCcc
Q psy8443         174 TDKDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       174 ~~~~eC~~~~~~C~~~C-----~n~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      .+.++|..++...+++|     .+..++|.|.|++||.    |..|+
T Consensus         4 ~~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce   46 (63)
T d1haea_           4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             EECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             ccCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCC----CCCcC
Confidence            35677777766666778     4677899999999999    66664

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0037  Score=34.10  Aligned_cols=28  Identities=43%  Similarity=1.013  Sum_probs=23.1

Q ss_pred             CCCee--eEEee--cceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH--TCKNI--LGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~--~C~n~--~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|.+  +|++.  .++|.|.|++||+    |..|+
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~----G~~Ce   41 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ   41 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcc----cCCCC
Confidence            46765  99875  4689999999999    99994

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0029  Score=33.25  Aligned_cols=32  Identities=19%  Similarity=0.693  Sum_probs=22.4

Q ss_pred             ccCCCccccccccc--CCceeeeccCCeEEccCCCCcc
Q psy8443         180 MTNNGGCQHECRNT--IGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       180 ~~~~~~C~~~C~n~--~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      ..++....++|++.  .++|.|.|++||.    |..|+
T Consensus         2 ~~nPC~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           2 SEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             SSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             cCCCCCCCCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            34444445678864  5689999999999    55554

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.008  Score=32.25  Aligned_cols=36  Identities=28%  Similarity=0.766  Sum_probs=26.2

Q ss_pred             eccccCC-CCCCee-eEEe--ecceEEEecCCCcEEcCCCCccc
Q psy8443          11 FDECALE-DHGCEH-TCKN--ILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        11 ideC~~~-~~~C~~-~C~n--~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      |.+|... .+.|-| .|..  ..+.|.|.|++||.    |..|+
T Consensus         3 i~~C~~~~~~yC~nG~C~~~~~~~~~~C~C~~gY~----G~RCe   42 (46)
T d1k36a_           3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             eeeCCCcCCCcCcCCEEEEeCCCCccEeECCCCce----ecCce
Confidence            5566643 346776 7764  35789999999999    88883

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.27  E-value=0.038  Score=30.63  Aligned_cols=34  Identities=26%  Similarity=0.648  Sum_probs=22.6

Q ss_pred             ccccCCCcccccccc--cCCceeeeccCCeEEccCCCCcc
Q psy8443         178 ECMTNNGGCQHECRN--TIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       178 eC~~~~~~C~~~C~n--~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +|..+....+++|..  ...+|.|.|++||.    |..|+
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce   43 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCc----CCCCc
Confidence            344443333456864  45689999999998    55664

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.00  E-value=0.037  Score=29.92  Aligned_cols=25  Identities=32%  Similarity=0.930  Sum_probs=19.0

Q ss_pred             cccccc--cCCceeeeccCCeEEccCCCCcc
Q psy8443         187 QHECRN--TIGSYICSCHNGYTLLENGHDCK  215 (330)
Q Consensus       187 ~~~C~n--~~gsy~C~C~~G~~l~~~~~~C~  215 (330)
                      +++|..  ...+|+|.|+.||.    |..|+
T Consensus        15 gG~C~~~~~~~~~~C~C~~gy~----G~~Ce   41 (48)
T d1nqlb_          15 DGVCMYIEALDKYACNCVVGYI----GERCQ   41 (48)
T ss_dssp             TCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CcEEeeeCCCCCeEEeCCCCcc----cCCCC
Confidence            456864  55789999999999    55664

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.083  Score=26.65  Aligned_cols=32  Identities=28%  Similarity=0.846  Sum_probs=23.4

Q ss_pred             cCccccCCCcccccccccC-CceeeeccCCeEEcc
Q psy8443         176 KDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLE  209 (330)
Q Consensus       176 ~~eC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~  209 (330)
                      .|.|...  .|..+|.... ++|.|.|..||....
T Consensus         4 vDPCf~~--~CE~qCqP~~~~~Y~CiCaeGFaP~p   36 (43)
T d1dx5i1           4 VDPCFRA--NCEYQCQPLDQTSYLCVCAEGFAPIP   36 (43)
T ss_dssp             CCGGGGC--CCSSEEEECSSSCEEEECCTTEEEET
T ss_pred             cccccCC--CcceeeeeCCCCcceEEeccccccCC
Confidence            4556544  3777887754 689999999998654

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.099  Score=28.22  Aligned_cols=35  Identities=26%  Similarity=0.498  Sum_probs=23.2

Q ss_pred             ccccCC-CCCCee--eEE-eecceEEEecCCCcEEcCCCCccc
Q psy8443          12 DECALE-DHGCEH--TCK-NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        12 deC~~~-~~~C~~--~C~-n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      ++|... .+.|-+  .|. ...+.+.|.|++||.    |..|+
T Consensus         5 ~pC~~~~~~yClnGgcc~~~~~~~~~C~C~~gy~----G~RCe   43 (49)
T d1moxc_           5 NDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYV----GARCE   43 (49)
T ss_dssp             ECCCCCSSCSSTTEEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CccCcccCCEeeCCeEEecCCCCCcEeECCCCCE----ecCCc
Confidence            345432 235655  442 334689999999999    99994

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.087  Score=28.61  Aligned_cols=28  Identities=29%  Similarity=0.471  Sum_probs=21.0

Q ss_pred             CCCee--eEE-eecceEEEecCCCcEEcCCCCccc
Q psy8443          19 HGCEH--TCK-NILGGYECSCKIGYELHSDGKICV   50 (330)
Q Consensus        19 ~~C~~--~C~-n~~gsy~C~C~~G~~l~~dg~~C~   50 (330)
                      +.|.+  .|. ...+.+.|.|+.||+    |..|+
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~----G~rCe   44 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYI----GARCE   44 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCe----eCCCc
Confidence            34654  553 446789999999999    88994

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=0.19  Score=23.86  Aligned_cols=16  Identities=50%  Similarity=1.155  Sum_probs=12.1

Q ss_pred             EEecCCCcEEcCCCCcc
Q psy8443          33 ECSCKIGYELHSDGKIC   49 (330)
Q Consensus        33 ~C~C~~G~~l~~dg~~C   49 (330)
                      .|.|+.||.|.. |..|
T Consensus        19 ~C~CPeGyIlde-g~~c   34 (35)
T d1dx5i2          19 SCECPEGYILDD-GFIC   34 (35)
T ss_dssp             CEECCTTEEEET-TTEE
T ss_pred             cccCCCceEecc-cccc
Confidence            489999998754 5555