Psyllid ID: psy8529

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430------
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSKT
cccHHHHHHHHHHHHccEEEEccccccccccccccccHHcHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHcccEEEEccccccccccccccccHHcHHHHHHHHHHHccccccEEEEEccccccHHHHHHHcccccEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccccccc
ccccHHHHHHHHHHcccEEEccccccccEEEEEEEEcccccEEEEEccccccccEEEEEEEEHHHccccccccccHHHHHHHccEEEccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHEEEEccccccHHHHHHHccHHHHHHHHHcccHHHHHHHHHccccccccccccHHHHHEEcccccHHHHHHHccccEEEEcccccHHcccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccEEEEEccccEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccEEcccccHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHcccccccccccHHHHHccccc
MEYGTLEAGFLALRRgwsinigggfhhasetkgggfcaYADISLLVKLLFQSKSISTAMIVdldahqfsdyyfpsahsiKRKRKVEFLKERKALEdeitsepqesvvtrpwpivyrpeynvhffkleklhpfdskkWKHIFNYLWKHIFNYLVEAKfitqdniiepqevsEEQLLIAHTEKYLKSLKWSFNVAaisevcplvavpnyfvqkcylrpmryhvggtLEAGFLALRRgwsinigggfhhasetkgggfcaYADISLLVKLLFQSKSISTAMIVDLdahqgngyekdfmnETRIFIMETCITSKAKEAIRCRIelapytedqHYLEKIEAGLERSLrsfcpdiivynagtdvllndplgllaispqgiirRDELVFMKARerrvpivmltsggylkQTARIIADSILNLadlglisrpynIWFIYYTSKT
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYfpsahsikrkRKVEFLKERKAledeitsepqesvvtrpwpiVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELapytedqhYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLlaispqgiirrDELVFMKarerrvpivmltsggylkQTARIIADSILNLadlglisrpyniWFIYYTSKT
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSKT
****TLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEF******************VVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYT***
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFN**AISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSK*
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALED*********VVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSKT
*EYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKER******ITSE*******RPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSK*
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MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNIWFIYYTSKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query436 2.2.26 [Sep-21-2011]
Q96DB2347 Histone deacetylase 11 OS yes N/A 0.724 0.910 0.534 1e-100
Q9GKU5347 Histone deacetylase 11 OS N/A N/A 0.724 0.910 0.534 1e-100
Q91WA3347 Histone deacetylase 11 OS yes N/A 0.713 0.896 0.542 1e-99
Q944K3387 Histone deacetylase 2 OS= yes N/A 0.697 0.785 0.485 1e-83
P28606300 Uncharacterized protein S yes N/A 0.610 0.886 0.262 7e-23
Q6GFX3389 Acetoin utilization prote yes N/A 0.607 0.681 0.256 1e-17
Q8NW34389 Acetoin utilization prote yes N/A 0.607 0.681 0.24 5e-17
Q6G8J2389 Acetoin utilization prote yes N/A 0.607 0.681 0.24 5e-17
Q5HF39389 Acetoin utilization prote yes N/A 0.607 0.681 0.24 6e-17
P64376389 Acetoin utilization prote yes N/A 0.607 0.681 0.236 4e-16
>sp|Q96DB2|HDA11_HUMAN Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 PE=1 SV=1 Back     alignment and function desciption
 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/331 (53%), Positives = 234/331 (70%), Gaps = 15/331 (4%)

Query: 99  TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
           T++  + V    WPIVY P YN+ F  LEKLHPFD+ KW  + N+L         E K +
Sbjct: 4   TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLL 55

Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
           +   ++E +E SEE LL+ HT +YL  LKWSF VA I+E+ P++ +PN+ VQ+  LRP+R
Sbjct: 56  SDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 115

Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
              GGT+ AG LA+ RGW+IN+GGGFHH S  +GGGFCAYADI+L +K LF+  + IS A
Sbjct: 116 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 175

Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMET------CITSKAKEAIRCRIELAPYTEDQHYL 331
            I+DLDAHQGNG+E+DFM++ R++IM+            AK+AIR ++EL   TED  YL
Sbjct: 176 TIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYL 235

Query: 332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVP 391
           +K+E  +++SL+   PD++VYNAGTD+L  D LG L+ISP GI++RDELVF   R RRVP
Sbjct: 236 DKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVP 295

Query: 392 IVMLTSGGYLKQTARIIADSILNLADLGLIS 422
           I+M+TSGGY K+TARIIADSILNL  LGLI 
Sbjct: 296 ILMVTSGGYQKRTARIIADSILNLFGLGLIG 326
Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 8
>sp|Q9GKU5|HDA11_MACFA Histone deacetylase 11 OS=Macaca fascicularis GN=HDAC11 PE=2 SV=2 Back     alignment and function description
>sp|Q91WA3|HDA11_MOUSE Histone deacetylase 11 OS=Mus musculus GN=Hdac11 PE=2 SV=1 Back     alignment and function description
>sp|Q944K3|HDA2_ARATH Histone deacetylase 2 OS=Arabidopsis thaliana GN=HDA2 PE=1 SV=2 Back     alignment and function description
>sp|P28606|Y1628_SYNP2 Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1628 PE=3 SV=2 Back     alignment and function description
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain MRSA252) GN=acuC PE=3 SV=1 Back     alignment and function description
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain MW2) GN=acuC PE=3 SV=1 Back     alignment and function description
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain MSSA476) GN=acuC PE=3 SV=1 Back     alignment and function description
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain COL) GN=acuC PE=3 SV=1 Back     alignment and function description
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain N315) GN=acuC PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query436
91080831331 PREDICTED: similar to Histone deacetylas 0.701 0.924 0.559 1e-100
10438544347 unnamed protein product [Homo sapiens] 0.724 0.910 0.537 2e-99
449266313334 Histone deacetylase 11, partial [Columba 0.699 0.913 0.55 6e-99
326927845425 PREDICTED: histone deacetylase 11-like [ 0.724 0.743 0.540 6e-99
118096828358 PREDICTED: histone deacetylase 11 [Gallu 0.724 0.882 0.540 9e-99
426339523347 PREDICTED: histone deacetylase 11 isofor 0.724 0.910 0.534 3e-98
217272877347 histone deacetylase 11 isoform 1 [Homo s 0.724 0.910 0.534 3e-98
388454314347 histone deacetylase 11 [Macaca mulatta] 0.724 0.910 0.534 6e-98
380798593338 histone deacetylase 11 isoform 1, partia 0.697 0.899 0.548 6e-98
355559429347 hypothetical protein EGK_11401, partial 0.724 0.910 0.534 6e-98
>gi|91080831|ref|XP_970656.1| PREDICTED: similar to Histone deacetylase 11 (HD11) [Tribolium castaneum] gi|270005420|gb|EFA01868.1| hypothetical protein TcasGA2_TC007473 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/322 (55%), Positives = 224/322 (69%), Gaps = 16/322 (4%)

Query: 111 WPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVS 170
           WPI+YRPEYNV F  LEKLHPFD+ KW +I+ YL             +  + +  P E +
Sbjct: 14  WPIIYRPEYNVRFLGLEKLHPFDAGKWGNIYKYLK--------SCGLVNDETLSVPNEAT 65

Query: 171 EEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
            E LL  HT+KYLKSLK SFNVA I+EV PL  VPNY VQ+ YLRPMR+  GG++ AG L
Sbjct: 66  TEDLLTVHTKKYLKSLKCSFNVALIAEVLPLCLVPNYLVQRGYLRPMRFQTGGSVLAGKL 125

Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQ--SKSISTAMIVDLDAHQGN 288
           AL RGW+INIGGGFHH   +KGGGFC YADI+LL+  +F    +S+   MIVDLDAHQGN
Sbjct: 126 ALERGWAINIGGGFHHCCGSKGGGFCVYADITLLIHFVFNHHPRSVQNVMIVDLDAHQGN 185

Query: 289 GYEKDFMNETRIFIMET------CITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSL 342
           GY++DF +   ++I++            AKE I  ++ELA +TED  YL+K+   L  +L
Sbjct: 186 GYQRDFKDNPNVYIIDVYNKGIYPFDKLAKEYITRKVELAHFTEDDEYLDKVAKNLTEAL 245

Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK 402
             FCP +IVYNAGTD+L  D LG L++SPQGII RDELVF +AR R +PIVMLTSGGYLK
Sbjct: 246 AEFCPQLIVYNAGTDILKGDALGCLSVSPQGIIERDELVFREARSRNIPIVMLTSGGYLK 305

Query: 403 QTARIIADSILNLADLGLISRP 424
           ++A+IIA SI NL D GLI+ P
Sbjct: 306 KSAKIIATSIKNLHDSGLITGP 327

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|10438544|dbj|BAB15272.1| unnamed protein product [Homo sapiens] Back     alignment and taxonomy information
>gi|449266313|gb|EMC77377.1| Histone deacetylase 11, partial [Columba livia] Back     alignment and taxonomy information
>gi|326927845|ref|XP_003210099.1| PREDICTED: histone deacetylase 11-like [Meleagris gallopavo] Back     alignment and taxonomy information
>gi|118096828|ref|XP_414321.2| PREDICTED: histone deacetylase 11 [Gallus gallus] Back     alignment and taxonomy information
>gi|426339523|ref|XP_004033698.1| PREDICTED: histone deacetylase 11 isoform 1 [Gorilla gorilla gorilla] Back     alignment and taxonomy information
>gi|217272877|ref|NP_079103.2| histone deacetylase 11 isoform 1 [Homo sapiens] gi|26394832|sp|Q96DB2.1|HDA11_HUMAN RecName: Full=Histone deacetylase 11; Short=HD11 gi|16307174|gb|AAH09676.1| Histone deacetylase 11 [Homo sapiens] gi|117644908|emb|CAL37920.1| hypothetical protein [synthetic construct] gi|117646466|emb|CAL38700.1| hypothetical protein [synthetic construct] gi|119584569|gb|EAW64165.1| histone deacetylase 11, isoform CRA_i [Homo sapiens] gi|119584572|gb|EAW64168.1| histone deacetylase 11, isoform CRA_i [Homo sapiens] gi|208966472|dbj|BAG73250.1| histone deacetylase 11 [synthetic construct] gi|410220854|gb|JAA07646.1| histone deacetylase 11 [Pan troglodytes] gi|410262586|gb|JAA19259.1| histone deacetylase 11 [Pan troglodytes] gi|410287274|gb|JAA22237.1| histone deacetylase 11 [Pan troglodytes] gi|410336795|gb|JAA37344.1| histone deacetylase 11 [Pan troglodytes] Back     alignment and taxonomy information
>gi|388454314|ref|NP_001252584.1| histone deacetylase 11 [Macaca mulatta] gi|26394837|sp|Q9GKU5.2|HDA11_MACFA RecName: Full=Histone deacetylase 11; Short=HD11 gi|387542188|gb|AFJ71721.1| histone deacetylase 11 isoform 1 [Macaca mulatta] Back     alignment and taxonomy information
>gi|380798593|gb|AFE71172.1| histone deacetylase 11 isoform 1, partial [Macaca mulatta] Back     alignment and taxonomy information
>gi|355559429|gb|EHH16157.1| hypothetical protein EGK_11401, partial [Macaca mulatta] gi|355746507|gb|EHH51121.1| hypothetical protein EGM_10451, partial [Macaca fascicularis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query436
UNIPROTKB|Q96DB2347 HDAC11 "Histone deacetylase 11 0.722 0.907 0.536 3.5e-91
UNIPROTKB|Q9GKU5347 HDAC11 "Histone deacetylase 11 0.722 0.907 0.536 4.5e-91
RGD|1311706347 Hdac11 "histone deacetylase 11 0.720 0.904 0.540 5.7e-91
MGI|MGI:2385252347 Hdac11 "histone deacetylase 11 0.711 0.893 0.544 7.3e-91
UNIPROTKB|F1NYW6357 HDAC11 "Uncharacterized protei 0.724 0.885 0.540 7.3e-91
UNIPROTKB|F1MWX4386 HDAC11 "Uncharacterized protei 0.694 0.784 0.550 2.2e-89
ZFIN|ZDB-GENE-040704-7366 hdac11 "histone deacetylase 11 0.692 0.825 0.542 1.3e-86
UNIPROTKB|E7ETT9319 HDAC11 "Histone deacetylase 11 0.660 0.902 0.547 8e-85
UNIPROTKB|F1PSI9319 HDAC11 "Uncharacterized protei 0.660 0.902 0.537 1.5e-83
UNIPROTKB|F1SPG6382 F1SPG6 "Uncharacterized protei 0.722 0.824 0.515 3.9e-83
UNIPROTKB|Q96DB2 HDAC11 "Histone deacetylase 11" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
 Identities = 177/330 (53%), Positives = 234/330 (70%)

Query:    99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
             T++  + V    WPIVY P YN+ F  LEKLHPFD+ KW  + N+L         E K +
Sbjct:     4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLL 55

Query:   159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
             +   ++E +E SEE LL+ HT +YL  LKWSF VA I+E+ P++ +PN+ VQ+  LRP+R
Sbjct:    56 SDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 115

Query:   219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
                GGT+ AG LA+ RGW+IN+GGGFHH S  +GGGFCAYADI+L +K LF+  + IS A
Sbjct:   116 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 175

Query:   278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYL 331
              I+DLDAHQGNG+E+DFM++ R++IM+            AK+AIR ++EL   TED  YL
Sbjct:   176 TIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYL 235

Query:   332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVP 391
             +K+E  +++SL+   PD++VYNAGTD+L  D LG L+ISP GI++RDELVF   R RRVP
Sbjct:   236 DKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVP 295

Query:   392 IVMLTSGGYLKQTARIIADSILNLADLGLI 421
             I+M+TSGGY K+TARIIADSILNL  LGLI
Sbjct:   296 ILMVTSGGYQKRTARIIADSILNLFGLGLI 325
GO:0006351 "transcription, DNA-dependent" evidence=IEA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA
GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14 specific)" evidence=IEA
GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9 specific)" evidence=IEA
GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16 specific)" evidence=IEA
GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18 specific)" evidence=IEA
GO:0014003 "oligodendrocyte development" evidence=IEA
GO:0000118 "histone deacetylase complex" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0016568 "chromatin modification" evidence=TAS
GO:0004407 "histone deacetylase activity" evidence=IDA
GO:0016575 "histone deacetylation" evidence=IDA
GO:0008134 "transcription factor binding" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
UNIPROTKB|Q9GKU5 HDAC11 "Histone deacetylase 11" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
RGD|1311706 Hdac11 "histone deacetylase 11" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2385252 Hdac11 "histone deacetylase 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYW6 HDAC11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MWX4 HDAC11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040704-7 hdac11 "histone deacetylase 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E7ETT9 HDAC11 "Histone deacetylase 11" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PSI9 HDAC11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SPG6 F1SPG6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q944K3HDA2_ARATH3, ., 5, ., 1, ., 9, 80.48580.69720.7855yesN/A
Q96DB2HDA11_HUMAN3, ., 5, ., 1, ., 9, 80.53470.72470.9106yesN/A
Q91WA3HDA11_MOUSE3, ., 5, ., 1, ., 9, 80.54290.71330.8962yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.980.914
3rd Layer3.5.10.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query436
cd09993275 cd09993, HDAC_classIV, Histone deacetylase class I 1e-110
cd09301279 cd09301, HDAC, Histone deacetylase (HDAC) classes 2e-64
pfam00850300 pfam00850, Hist_deacetyl, Histone deacetylase doma 5e-55
COG0123340 COG0123, AcuC, Deacetylases, including yeast histo 4e-31
cd09994313 cd09994, HDAC_AcuC_like, Class I histone deacetyla 7e-27
cd09993275 cd09993, HDAC_classIV, Histone deacetylase class I 8e-26
cd09992291 cd09992, HDAC_classII, Histone deacetylases and hi 4e-17
cd10011366 cd10011, HDAC2, Histone deacetylase 2 (HDAC2) 5e-14
cd09301279 cd09301, HDAC, Histone deacetylase (HDAC) classes 3e-13
PTZ00346429 PTZ00346, PTZ00346, histone deacetylase; Provision 3e-13
cd10010371 cd10010, HDAC1, Histone deacetylase 1 (HDAC1) 6e-12
cd10000364 cd10000, HDAC8, Histone deacetylase 8 (HDAC8) 7e-12
cd11680294 cd11680, HDAC_Hos1, Class I histone deacetylases H 7e-12
PTZ00063436 PTZ00063, PTZ00063, histone deacetylase; Provision 3e-11
cd10004375 cd10004, RPD3-like, reduced potassium dependency-3 6e-11
cd09991306 cd09991, HDAC_classI, Class I histone deacetylases 9e-11
pfam00850300 pfam00850, Hist_deacetyl, Histone deacetylase doma 5e-10
cd11599288 cd11599, HDAC_classII_2, Histone deacetylases and 6e-10
cd11598311 cd11598, HDAC_Hos2, Class I histone deacetylases i 7e-10
cd09996359 cd09996, HDAC_classII_1, Histone deacetylases and 9e-10
cd10002336 cd10002, HDAC10_HDAC6-dom1, Histone deacetylase 6, 1e-09
cd10009379 cd10009, HDAC9, Histone deacetylase 9 1e-08
cd10007420 cd10007, HDAC5, Histone deacetylase 5 3e-08
cd10006409 cd10006, HDAC4, Histone deacetylase 4 4e-08
cd11600313 cd11600, HDAC_Clr3, Class II Histone deacetylase C 1e-07
cd11682337 cd11682, HDAC6-dom1, Histone deacetylase 6, domain 1e-07
cd11681377 cd11681, HDAC_classIIa, Histone deacetylases, clas 1e-07
COG0123340 COG0123, AcuC, Deacetylases, including yeast histo 2e-07
cd10005381 cd10005, HDAC3, Histone deacetylase 3 (HDAC3) 2e-07
cd10001298 cd10001, HDAC_classII_APAH, Histone deacetylase cl 2e-07
cd09994313 cd09994, HDAC_AcuC_like, Class I histone deacetyla 3e-07
cd10003350 cd10003, HDAC6-dom2, Histone deacetylase 6, domain 4e-07
cd10008378 cd10008, HDAC7, Histone deacetylase 7 5e-06
cd11683337 cd11683, HDAC10, Histone deacetylase 10 2e-04
cd11680294 cd11680, HDAC_Hos1, Class I histone deacetylases H 4e-04
cd10006409 cd10006, HDAC4, Histone deacetylase 4 4e-04
cd09991306 cd09991, HDAC_classI, Class I histone deacetylases 0.001
cd10009379 cd10009, HDAC9, Histone deacetylase 9 0.001
cd10007420 cd10007, HDAC5, Histone deacetylase 5 0.001
cd10000364 cd10000, HDAC8, Histone deacetylase 8 (HDAC8) 0.003
cd09996359 cd09996, HDAC_classII_1, Histone deacetylases and 0.003
cd11681377 cd11681, HDAC_classIIa, Histone deacetylases, clas 0.004
>gnl|CDD|212519 cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11 Back     alignment and domain information 
 Score =  325 bits (836), Expect = e-110
 Identities = 98/291 (33%), Positives = 142/291 (48%), Gaps = 21/291 (7%)

Query: 130 HPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWS 189
           H F  +K+  +   L        +E   +  ++I+EP+  + E LL  H  +YL+SLK  
Sbjct: 1   HRFPMRKYGLLREAL--------LEEGLVLPEDIVEPEPATREDLLRVHDPEYLESLKSG 52

Query: 190 FNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASE 249
                  E    +  P        +   R  VGGT+ A  LAL  G +IN+ GG HHA  
Sbjct: 53  ---ELSREEIRRIGFPWS---PELVERTRLAVGGTILAARLALEHGLAINLAGGTHHAFP 106

Query: 250 TKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITS 309
            +G GFC + DI++  ++L     +   +IVDLD HQGNG    F ++  +F     +  
Sbjct: 107 DRGEGFCVFNDIAIAARVLLAEGLVRRVLIVDLDVHQGNGTAAIFADDPSVFTFS--MHG 164

Query: 310 KA-----KEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPL 364
           +      KE     + L   T D  YL  +E  L R L  F PD++ YNAG DVL  D L
Sbjct: 165 EKNYPFRKEPSDLDVPLPDGTGDDEYLAALEEALPRLLAEFRPDLVFYNAGVDVLAGDRL 224

Query: 365 GLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 415
           G L++S +G+  RD LV   AR R +P+ M+  GGY +  AR++A     L
Sbjct: 225 GRLSLSLEGLRERDRLVLRFARARGIPVAMVLGGGYSRDIARLVARHAQTL 275

Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients. Length = 275
>gnl|CDD|212512 cd09301, HDAC, Histone deacetylase (HDAC) classes I, II, IV and related proteins Back     alignment and domain information
>gnl|CDD|216151 pfam00850, Hist_deacetyl, Histone deacetylase domain Back     alignment and domain information
>gnl|CDD|223201 COG0123, AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|212520 cd09994, HDAC_AcuC_like, Class I histone deacetylase AcuC (Acetoin utilization protein)-like enzymes Back     alignment and domain information
>gnl|CDD|212519 cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11 Back     alignment and domain information
>gnl|CDD|212518 cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII Back     alignment and domain information
>gnl|CDD|212535 cd10011, HDAC2, Histone deacetylase 2 (HDAC2) Back     alignment and domain information
>gnl|CDD|212512 cd09301, HDAC, Histone deacetylase (HDAC) classes I, II, IV and related proteins Back     alignment and domain information
>gnl|CDD|240374 PTZ00346, PTZ00346, histone deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|212534 cd10010, HDAC1, Histone deacetylase 1 (HDAC1) Back     alignment and domain information
>gnl|CDD|212524 cd10000, HDAC8, Histone deacetylase 8 (HDAC8) Back     alignment and domain information
>gnl|CDD|212543 cd11680, HDAC_Hos1, Class I histone deacetylases Hos1 and related proteins Back     alignment and domain information
>gnl|CDD|240251 PTZ00063, PTZ00063, histone deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|212528 cd10004, RPD3-like, reduced potassium dependency-3 (RPD3)-like Back     alignment and domain information
>gnl|CDD|212517 cd09991, HDAC_classI, Class I histone deacetylases Back     alignment and domain information
>gnl|CDD|216151 pfam00850, Hist_deacetyl, Histone deacetylase domain Back     alignment and domain information
>gnl|CDD|212541 cd11599, HDAC_classII_2, Histone deacetylases and histone-like deacetylases, classII Back     alignment and domain information
>gnl|CDD|212540 cd11598, HDAC_Hos2, Class I histone deacetylases including ScHos2 and SpPhd1 Back     alignment and domain information
>gnl|CDD|212521 cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII Back     alignment and domain information
>gnl|CDD|212526 cd10002, HDAC10_HDAC6-dom1, Histone deacetylase 6, domain 1 and histone deacetylase 10 Back     alignment and domain information
>gnl|CDD|212533 cd10009, HDAC9, Histone deacetylase 9 Back     alignment and domain information
>gnl|CDD|212531 cd10007, HDAC5, Histone deacetylase 5 Back     alignment and domain information
>gnl|CDD|212530 cd10006, HDAC4, Histone deacetylase 4 Back     alignment and domain information
>gnl|CDD|212542 cd11600, HDAC_Clr3, Class II Histone deacetylase Clr3 and similar proteins Back     alignment and domain information
>gnl|CDD|212545 cd11682, HDAC6-dom1, Histone deacetylase 6, domain 1 Back     alignment and domain information
>gnl|CDD|212544 cd11681, HDAC_classIIa, Histone deacetylases, class IIa Back     alignment and domain information
>gnl|CDD|223201 COG0123, AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|212529 cd10005, HDAC3, Histone deacetylase 3 (HDAC3) Back     alignment and domain information
>gnl|CDD|212525 cd10001, HDAC_classII_APAH, Histone deacetylase class IIa Back     alignment and domain information
>gnl|CDD|212520 cd09994, HDAC_AcuC_like, Class I histone deacetylase AcuC (Acetoin utilization protein)-like enzymes Back     alignment and domain information
>gnl|CDD|212527 cd10003, HDAC6-dom2, Histone deacetylase 6, domain 2 Back     alignment and domain information
>gnl|CDD|212532 cd10008, HDAC7, Histone deacetylase 7 Back     alignment and domain information
>gnl|CDD|212546 cd11683, HDAC10, Histone deacetylase 10 Back     alignment and domain information
>gnl|CDD|212543 cd11680, HDAC_Hos1, Class I histone deacetylases Hos1 and related proteins Back     alignment and domain information
>gnl|CDD|212530 cd10006, HDAC4, Histone deacetylase 4 Back     alignment and domain information
>gnl|CDD|212517 cd09991, HDAC_classI, Class I histone deacetylases Back     alignment and domain information
>gnl|CDD|212533 cd10009, HDAC9, Histone deacetylase 9 Back     alignment and domain information
>gnl|CDD|212531 cd10007, HDAC5, Histone deacetylase 5 Back     alignment and domain information
>gnl|CDD|212524 cd10000, HDAC8, Histone deacetylase 8 (HDAC8) Back     alignment and domain information
>gnl|CDD|212521 cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII Back     alignment and domain information
>gnl|CDD|212544 cd11681, HDAC_classIIa, Histone deacetylases, class IIa Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 436
PTZ00063436 histone deacetylase; Provisional 100.0
PTZ00346429 histone deacetylase; Provisional 100.0
COG0123340 AcuC Deacetylases, including yeast histone deacety 100.0
PF00850311 Hist_deacetyl: Histone deacetylase domain; InterPr 100.0
KOG1342|consensus425 100.0
KOG1344|consensus324 100.0
KOG1343|consensus797 100.0
KOG1343|consensus 797 100.0
PTZ00346429 histone deacetylase; Provisional 99.87
PTZ00063436 histone deacetylase; Provisional 99.87
PF00850311 Hist_deacetyl: Histone deacetylase domain; InterPr 99.86
COG0123340 AcuC Deacetylases, including yeast histone deacety 99.85
KOG1342|consensus425 99.84
KOG1344|consensus324 99.65
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 88.43
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 87.77
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 85.47
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 84.37
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 83.79
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 82.01
>PTZ00063 histone deacetylase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.7e-78  Score=614.26  Aligned_cols=312  Identities=20%  Similarity=0.357  Sum_probs=278.3

Q ss_pred             CCceEEEEccccccccccCCCCCCCChHHHHHHHhhchhhHHHHHHhcCCCCCCeeeCCCCCCHHHHHhhcCHHHHHHHH
Q psy8529         108 TRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLK  187 (436)
Q Consensus       108 ~~~~~ivy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~~~~~~~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yi~~l~  187 (436)
                      +.|++++|||+|..|.++  .+|||+|.|++.++        ++|.+.|+...+++++|++|+.++|++||+++||++|+
T Consensus         3 ~~~v~~~yd~~~~~h~~g--~~HP~~P~Rl~~~~--------~ll~~~gl~~~~~~~~p~~At~eeL~~vHs~~YI~~L~   72 (436)
T PTZ00063          3 RKRVSYFYDPDIGSYYYG--PGHPMKPQRIRMAH--------ALILSYDLYKHMEIYRPHKSVEPELVLFHDEEYVDFLS   72 (436)
T ss_pred             CceEEEEECccccCcCCc--CcCCcChHHHHHHH--------HHHHhCCCcccCeEecCCCCCHHHHHHhCCHHHHHHHH
Confidence            567999999999999987  47999999999999        99999999998999999999999999999999999998


Q ss_pred             hhhhhhhhh---ccCCcccc--CCccccccchHHHHHHhccHHHHHHHhhh--cCeEEEccCCCCCCCcCCCCCcccccc
Q psy8529         188 WSFNVAAIS---EVCPLVAV--PNYFVQKCYLRPMRYHVGGTLEAGFLALR--RGWSINIGGGFHHASETKGGGFCAYAD  260 (436)
Q Consensus       188 ~~~~~~~~~---e~~~~~~~--~d~~v~~~t~~~a~~~~gg~~~aa~~~~~--~g~a~~~~~G~HHA~~~~~~GFC~fNn  260 (436)
                      +........   ......++  +||++++++++.+++++||++.||+.+++  .++|+||+||+|||++++++|||+|||
T Consensus        73 ~~~~~~~~~~~~~~~~f~lg~~~D~pv~~gl~~~a~~aaGgsl~Aa~~l~~g~~~iAin~~GG~HHA~~~~A~GFC~~Nd  152 (436)
T PTZ00063         73 SISPENYRDFTYQLKRFNVGEATDCPVFDGLFEFQQSCAGASIDGAYKLNNHQADICVNWSGGLHHAKRSEASGFCYIND  152 (436)
T ss_pred             HhChhhcccchhhhhhcccCCCCCCCcccHHHHHHHHHHhHHHHHHHHHHcCCCCEEeeCCCCCCCCccCCCCceeeecH
Confidence            754321100   00111233  59999999999999999999999998876  369999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecccccCccceeccccCCCEEEEEecCCC--------------CCCCCeeEeeeCCCCCC
Q psy8529         261 ISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITS--------------KAKEAIRCRIELAPYTE  326 (436)
Q Consensus       261 vAIAa~~l~~~~g~~rV~IvD~D~HhGnGtq~if~~d~~V~~~SiH~~~--------------~~~~g~~~NvpL~~g~~  326 (436)
                      |||||++|++.  .+||+|||||||||||||+||+++|+|+|+|+|+.+              +.++++++|||||+|++
T Consensus       153 iaiAi~~L~~~--~~RVliID~DvHHGdGtqe~F~~~~~VltvS~H~~~~ffPgtG~~~e~G~g~G~g~~vNvPL~~G~~  230 (436)
T PTZ00063        153 IVLGILELLKY--HARVMYIDIDVHHGDGVEEAFYVTHRVMTVSFHKFGDFFPGTGDVTDIGVAQGKYYSVNVPLNDGID  230 (436)
T ss_pred             HHHHHHHHHHh--CCeEEEEeCCCCCCcchHHHhccCCCeEEEEeccCCCcCCCCCCccccCCCCCCceEEEeeCCCCCC
Confidence            99999999986  479999999999999999999999999999999431              12457899999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCEEEEecCCCcCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCcch-H
Q psy8529         327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQT-A  405 (436)
Q Consensus       327 d~~yl~~~~~~l~~~~~~f~PdlivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~~a~~~~~~iv~vleGGY~~~~-~  405 (436)
                      |++|+.+|+++|.|++++|+||+||+|||+|+|.+||||.|+||++||.++.+++    +++++|+++++||||++.+ +
T Consensus       231 D~~Y~~~f~~ii~~~i~~f~Pd~IvvqaG~D~~~~DpLg~l~Lt~~g~~~~~~~~----~~~~~pil~l~gGGY~~~~la  306 (436)
T PTZ00063        231 DDSFVDLFKPVISKCVEVYRPGAIVLQCGADSLTGDRLGRFNLTIKGHAACVEFV----RSLNIPLLVLGGGGYTIRNVA  306 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEECCccccCCCCCCCcccCHHHHHHHHHHH----HhcCCCEEEEeCccCCchHHH
Confidence            9999999999999999999999999999999999999999999999999876654    5569999999999999865 9


Q ss_pred             HHHHHHHHHHHcc--CCC-CCCccccccccCCC
Q psy8529         406 RIIADSILNLADL--GLI-SRPYNIWFIYYTSK  435 (436)
Q Consensus       406 ~~~~~~v~~l~~~--~l~-~~~~~~~~~~~~~~  435 (436)
                      ++|+..+..++|+  +++ .||+|+||+||+|.
T Consensus       307 r~w~~~t~~~~~~~~~~~~~iP~~~~~~~~~~~  339 (436)
T PTZ00063        307 RCWAYETGVILNKHDEMSDQISLNDYYDYYAPD  339 (436)
T ss_pred             HHHHHHHHHHhCCcccCCccCCCCcchhhcCCC
Confidence            9999999999997  466 89999999999985

>PTZ00346 histone deacetylase; Provisional Back     alignment and domain information
>COG0123 AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF00850 Hist_deacetyl: Histone deacetylase domain; InterPro: IPR023801 Regulation of transcription is, in part, modulated by reversible histone acetylation on several lysine Back     alignment and domain information
>KOG1342|consensus Back     alignment and domain information
>KOG1344|consensus Back     alignment and domain information
>KOG1343|consensus Back     alignment and domain information
>KOG1343|consensus Back     alignment and domain information
>PTZ00346 histone deacetylase; Provisional Back     alignment and domain information
>PTZ00063 histone deacetylase; Provisional Back     alignment and domain information
>PF00850 Hist_deacetyl: Histone deacetylase domain; InterPro: IPR023801 Regulation of transcription is, in part, modulated by reversible histone acetylation on several lysine Back     alignment and domain information
>COG0123 AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1342|consensus Back     alignment and domain information
>KOG1344|consensus Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query436
1c3r_A375 Crystal Structure Of An Hdac Homolog Complexed With 5e-13
1c3p_A375 Crystal Structure Of An Hdac Homolog From Aquifex A 2e-12
3mz4_A389 Crystal Structure Of D101l Mn2+ Hdac8 Complexed Wit 2e-10
3ew8_A388 Crystal Structure Analysis Of Human Hdac8 D101l Var 2e-10
3f06_A388 Crystal Structure Analysis Of Human Hdac8 D101a Var 3e-10
3sff_A378 Crystal Structure Of Human Hdac8 Inhibitor Complex, 6e-10
3ezp_A388 Crystal Structure Analysis Of Human Hdac8 D101n Var 6e-10
3ezt_A388 Crystal Structure Analysis Of Human Hdac8 D101e Var 6e-10
3mz3_A389 Crystal Structure Of Co2+ Hdac8 Complexed With M344 6e-10
1t64_A377 Crystal Structure Of Human Hdac8 Complexed With Tri 6e-10
3f07_A388 Crystal Structure Analysis Of Human Hdac8 Complexed 6e-10
2v5x_A388 Crystal Structure Of Hdac8-Inhibitor Complex Length 7e-10
3max_A367 Crystal Structure Of Human Hdac2 Complexed With An 7e-10
2v5w_A388 Crystal Structure Of Hdac8-Substrate Complex Length 2e-09
4a69_A376 Structure Of Hdac3 Bound To Corepressor And Inosito 2e-09
3ewf_A388 Crystal Structure Analysis Of Human Hdac8 H143a Var 8e-09
2vqo_A413 Structure Of Hdac4 Catalytic Domain With A Gain-Of- 2e-07
2vqw_G413 Structure Of Inhibitor-Free Hdac4 Catalytic Domain 2e-07
2vqq_A413 Structure Of Hdac4 Catalytic Domain (A Double Cyste 3e-07
2vqj_A413 Structure Of Hdac4 Catalytic Domain Bound To A Trif 4e-07
1zz0_A369 Crystal Structure Of A Hdac-Like Protein With Aceta 4e-07
2vcg_A375 Crystal Structure Of A Hdac-like Protein Hdah From 4e-07
3men_A362 Crystal Structure Of Acetylpolyamine Aminohydrolase 2e-06
3c0y_A423 Crystal Structure Of Catalytic Domain Of Human Hist 3e-06
>pdb|1C3R|A Chain A, Crystal Structure Of An Hdac Homolog Complexed With Trichostatin A Length = 375 Back     alignment and structure 
Iteration: 1

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 32/239 (13%)
Query: 157 FITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRP 216
            I +  +I+ +  ++E+LL+ HTE Y+ +L      A  S+  P  A   Y +   Y  P
Sbjct: 40  LIDEKELIKSRPATKEELLLFHTEDYINTLME----AERSQSVPKGAREKYNIG-GYENP 94
Query: 217 MRYHV--------GGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLL 268
           + Y +        G T++A    L+   + N  GG HHA +++  GFC   + ++ ++ L
Sbjct: 95  VSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYL 154
Query: 269 FQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFI-----------------METCITSKA 311
            + K     + +DLDAH  +G ++ F +  ++F+                 +E     K 
Sbjct: 155 -RKKGFKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKG 213
Query: 312 KEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAIS 370
           K      I L     D  +L  +E  LE     F P++ +   GTD LL D L    +S
Sbjct: 214 K-GYNLNIPLPKGLNDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLS 271
>pdb|1C3P|A Chain A, Crystal Structure Of An Hdac Homolog From Aquifex Aeolicus Length = 375 Back     alignment and structure
>pdb|3MZ4|A Chain A, Crystal Structure Of D101l Mn2+ Hdac8 Complexed With M344 Length = 389 Back     alignment and structure
>pdb|3EW8|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101l Variant Length = 388 Back     alignment and structure
>pdb|3F06|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101a Variant. Length = 388 Back     alignment and structure
>pdb|3SFF|A Chain A, Crystal Structure Of Human Hdac8 Inhibitor Complex, An Amino Acid Derived Inhibitor Length = 378 Back     alignment and structure
>pdb|3EZP|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101n Variant Length = 388 Back     alignment and structure
>pdb|3EZT|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101e Variant Length = 388 Back     alignment and structure
>pdb|3MZ3|A Chain A, Crystal Structure Of Co2+ Hdac8 Complexed With M344 Length = 389 Back     alignment and structure
>pdb|1T64|A Chain A, Crystal Structure Of Human Hdac8 Complexed With Trichostatin A Length = 377 Back     alignment and structure
>pdb|3F07|A Chain A, Crystal Structure Analysis Of Human Hdac8 Complexed With Apha In A New Monoclinic Crystal Form Length = 388 Back     alignment and structure
>pdb|2V5X|A Chain A, Crystal Structure Of Hdac8-Inhibitor Complex Length = 388 Back     alignment and structure
>pdb|3MAX|A Chain A, Crystal Structure Of Human Hdac2 Complexed With An N-(2-Amin Benzamide Length = 367 Back     alignment and structure
>pdb|2V5W|A Chain A, Crystal Structure Of Hdac8-Substrate Complex Length = 388 Back     alignment and structure
>pdb|4A69|A Chain A, Structure Of Hdac3 Bound To Corepressor And Inositol Tetraphosphate Length = 376 Back     alignment and structure
>pdb|3EWF|A Chain A, Crystal Structure Analysis Of Human Hdac8 H143a Variant Complexed With Substrate. Length = 388 Back     alignment and structure
>pdb|2VQO|A Chain A, Structure Of Hdac4 Catalytic Domain With A Gain-Of-Function Muation Bound To A Trifluoromethylketone Inhbitor Length = 413 Back     alignment and structure
>pdb|2VQW|G Chain G, Structure Of Inhibitor-Free Hdac4 Catalytic Domain (With Gain-Of-Function Mutation His332tyr) Length = 413 Back     alignment and structure
>pdb|2VQQ|A Chain A, Structure Of Hdac4 Catalytic Domain (A Double Cysteine-To- Alanine Mutant) Bound To A Trifluoromethylketone Inhbitor Length = 413 Back     alignment and structure
>pdb|2VQJ|A Chain A, Structure Of Hdac4 Catalytic Domain Bound To A Trifluoromethylketone Inhbitor Length = 413 Back     alignment and structure
>pdb|1ZZ0|A Chain A, Crystal Structure Of A Hdac-Like Protein With Acetate Bound Length = 369 Back     alignment and structure
>pdb|2VCG|A Chain A, Crystal Structure Of A Hdac-like Protein Hdah From Bordetella Sp. With The Bound Inhibitor St-17 Length = 375 Back     alignment and structure
>pdb|3MEN|A Chain A, Crystal Structure Of Acetylpolyamine Aminohydrolase From Burkholderia Pseudomallei, Iodide Soak Length = 362 Back     alignment and structure
>pdb|3C0Y|A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 Length = 423 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query436
3ew8_A388 HD8, histone deacetylase 8; hydrolase, HDAC, metal 2e-28
3ew8_A388 HD8, histone deacetylase 8; hydrolase, HDAC, metal 3e-07
1c3p_A375 Protein (HDLP (histone deacetylase-like protein) ) 6e-28
1c3p_A375 Protein (HDLP (histone deacetylase-like protein) ) 3e-08
3max_A367 HD2, histone deacetylase 2; class 2, HDAC, foot po 6e-28
3max_A367 HD2, histone deacetylase 2; class 2, HDAC, foot po 5e-07
4a69_A376 Histone deacetylase 3,; transcription, hydrolase; 7e-27
4a69_A376 Histone deacetylase 3,; transcription, hydrolase; 3e-06
3q9b_A341 Acetylpolyamine amidohydrolase; HDAC, polyamines, 4e-18
1zz1_A369 Histone deacetylase-like amidohydrolase; HET: SHH; 8e-16
3men_A362 Acetylpolyamine aminohydrolase; histone deacetylas 2e-15
2pqp_A421 HD7A, histone deacetylase 7A; HDAC, structural gen 4e-13
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A* Length = 388 Back     alignment and structure
 Score =  114 bits (288), Expect = 2e-28
 Identities = 76/362 (20%), Positives = 135/362 (37%), Gaps = 49/362 (13%)

Query: 97  EITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAK 156
           E   EP +S  +     +Y PEY      +        K+   + + +            
Sbjct: 2   EEPEEPADSGQSLVPVYIYSPEY----VSMCDSLAKIPKRASMVHSLI--------EAYA 49

Query: 157 FITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRP 216
              Q  I++P+  S E++   HT+ YL+ L+    V+   +     ++       C    
Sbjct: 50  LHKQMRIVKPKVASMEEMATFHTDAYLQHLQ---KVSQEGDDDHPDSIEYGLGYLCPATE 106

Query: 217 MRYH-----VGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADISLLVK-L 267
             +       G T+ A    L  G     IN  GG+HHA + +  GFC   D  L +  L
Sbjct: 107 GIFDYAAAIGGATITAA-QCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL 165

Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIM---------------ETCITSKAK 312
             + + I   + VDLD H G+G E  F   +++  +                + +     
Sbjct: 166 RRKFERI---LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKG 222

Query: 313 EAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
                 + +    +D+ Y +  E+ L+   ++F P  +V   G D +  DP+    ++P 
Sbjct: 223 RYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPV 282

Query: 373 GIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFI 430
           GI +          + ++  ++L  GGY L  TAR        +    L S  P + +F 
Sbjct: 283 GIGK----CLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFT 338

Query: 431 YY 432
            Y
Sbjct: 339 AY 340
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A* Length = 388 Back     alignment and structure
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A* Length = 375 Back     alignment and structure
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A* Length = 375 Back     alignment and structure
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens} Length = 367 Back     alignment and structure
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens} Length = 367 Back     alignment and structure
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} Length = 376 Back     alignment and structure
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} Length = 376 Back     alignment and structure
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A* Length = 341 Back     alignment and structure
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A* Length = 369 Back     alignment and structure
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B} Length = 362 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query436
3max_A367 HD2, histone deacetylase 2; class 2, HDAC, foot po 100.0
4a69_A376 Histone deacetylase 3,; transcription, hydrolase; 100.0
3ew8_A388 HD8, histone deacetylase 8; hydrolase, HDAC, metal 100.0
1zz1_A369 Histone deacetylase-like amidohydrolase; HET: SHH; 100.0
1c3p_A375 Protein (HDLP (histone deacetylase-like protein) ) 100.0
2pqp_A421 HD7A, histone deacetylase 7A; HDAC, structural gen 100.0
2vqm_A413 HD4, histone deacetylase 4; inhibitor, repressor, 100.0
3q9b_A341 Acetylpolyamine amidohydrolase; HDAC, polyamines, 100.0
3men_A362 Acetylpolyamine aminohydrolase; histone deacetylas 100.0
1c3p_A375 Protein (HDLP (histone deacetylase-like protein) ) 99.89
1zz1_A369 Histone deacetylase-like amidohydrolase; HET: SHH; 99.88
3max_A367 HD2, histone deacetylase 2; class 2, HDAC, foot po 99.87
3ew8_A388 HD8, histone deacetylase 8; hydrolase, HDAC, metal 99.87
4a69_A376 Histone deacetylase 3,; transcription, hydrolase; 99.87
2pqp_A421 HD7A, histone deacetylase 7A; HDAC, structural gen 99.87
3q9b_A341 Acetylpolyamine amidohydrolase; HDAC, polyamines, 99.87
2vqm_A413 HD4, histone deacetylase 4; inhibitor, repressor, 99.85
3men_A362 Acetylpolyamine aminohydrolase; histone deacetylas 99.85
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 89.59
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 88.45
3bzw_A274 Putative lipase; protein structure initiative II, 81.07
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 80.25
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.9e-82  Score=638.22  Aligned_cols=312  Identities=21%  Similarity=0.365  Sum_probs=281.9

Q ss_pred             CCceEEEEccccccccccCCCCCCCChHHHHHHHhhchhhHHHHHHhcCCCCCCeeeCCCCCCHHHHHhhcCHHHHHHHH
Q psy8529         108 TRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLK  187 (436)
Q Consensus       108 ~~~~~ivy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~~~~~~~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yi~~l~  187 (436)
                      +.|++++|||+|+.|.++  .+|||+|+|++.+.        ++|++.|+.+.+++++|++|+.++|++|||++||++|+
T Consensus         2 ~~~v~~~y~~~~~~~~~g--~~HPe~P~Rl~~i~--------~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~   71 (367)
T 3max_A            2 KKKVCYYYDGDIGNYYYG--QGHPMKPHRIRMTH--------NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR   71 (367)
T ss_dssp             CCCEEEECCGGGGGCCCC--TTCSCCTHHHHHHH--------HHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHH
T ss_pred             CCeEEEEECccccCcCCC--CCCCCCHHHHHHHH--------HHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHH
Confidence            468999999999999988  47999999999999        99999999999999999999999999999999999998


Q ss_pred             hhhhhhhh---hccCCccccCCccccccchHHHHHHhccHHHHHHHhhh--cCeEEEccCCCCCCCcCCCCCccccccHH
Q psy8529         188 WSFNVAAI---SEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALR--RGWSINIGGGFHHASETKGGGFCAYADIS  262 (436)
Q Consensus       188 ~~~~~~~~---~e~~~~~~~~d~~v~~~t~~~a~~~~gg~~~aa~~~~~--~g~a~~~~~G~HHA~~~~~~GFC~fNnvA  262 (436)
                      +.+.....   .+.....+++||++++++|+++++++||++.|++.+++  .++|++||||+|||++++++|||+|||||
T Consensus        72 ~~~~~~~~~~~~~~~~~~l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~~~~Ai~~pgG~HHA~~~~a~GFC~~Ndva  151 (367)
T 3max_A           72 SIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIV  151 (367)
T ss_dssp             HCCGGGGGGCHHHHHHTTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBCSCHHH
T ss_pred             HhCccccchhhhHhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceEecCCCCCCcCCcCCCCCchhhhHHH
Confidence            75432110   01112346789999999999999999999999998764  57999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecccccCccceeccccCCCEEEEEecCCC--------------CCCCCeeEeeeCCCCCCch
Q psy8529         263 LLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITS--------------KAKEAIRCRIELAPYTEDQ  328 (436)
Q Consensus       263 IAa~~l~~~~g~~rV~IvD~D~HhGnGtq~if~~d~~V~~~SiH~~~--------------~~~~g~~~NvpL~~g~~d~  328 (436)
                      |||++|++.  .+||+|||||||||||||+|||+||+|+|+|+|+.+              +.++|+++|||||+|++|+
T Consensus       152 iAa~~l~~~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~  229 (367)
T 3max_A          152 LAILELLKY--HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDE  229 (367)
T ss_dssp             HHHHHHTTT--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSSCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHH
T ss_pred             HHHHHHHHc--CCcEEEEecCCCCCchhhHHhcCCCCEEEEecccCCCCCCCCCCccccCCCCCCceEEEEecCCCCCHH
Confidence            999999976  589999999999999999999999999999999431              1235689999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEecCCCcCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCcch-HHH
Q psy8529         329 HYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQT-ARI  407 (436)
Q Consensus       329 ~yl~~~~~~l~~~~~~f~PdlivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~~a~~~~~~iv~vleGGY~~~~-~~~  407 (436)
                      +|+.+|+++|.|++++|+||+||||||||+|.+||||.|+||++||.++++.+    +++++|+++++||||++.+ +++
T Consensus       230 ~y~~~~~~~~~~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~g~~~~~~~~----~~~~~p~v~~~eGGY~~~~var~  305 (367)
T 3max_A          230 SYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARC  305 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHHHHHHHHHHH----HTTCCCEEEECCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEECCccCcCCCCCCCeeeCHHHHHHHHHHH----HhcCCCEEEEeCCCCChhHHHHH
Confidence            99999999999999999999999999999999999999999999999987765    4569999999999999875 999


Q ss_pred             HHHHHHHHHccCCC-CCCccccccccCCC
Q psy8529         408 IADSILNLADLGLI-SRPYNIWFIYYTSK  435 (436)
Q Consensus       408 ~~~~v~~l~~~~l~-~~~~~~~~~~~~~~  435 (436)
                      |+..+..++|.+++ .+|+|+||+||+|.
T Consensus       306 wt~~ta~~~~~~i~~~~p~~~~~~~~~p~  334 (367)
T 3max_A          306 WTYETAVALDCEIPNELPYNDYFEYFGPD  334 (367)
T ss_dssp             HHHHHHHHTTCCCCSBCCCCTTGGGGTTT
T ss_pred             HHHHHHHHhhcccccCCCchhhHHhhCCC
Confidence            99999999999999 79999999999984
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} Back     alignment and structure
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A* Back     alignment and structure
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A* Back     alignment and structure
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A* Back     alignment and structure
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A* Back     alignment and structure
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A* Back     alignment and structure
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A* Back     alignment and structure
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A* Back     alignment and structure
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens} Back     alignment and structure
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A* Back     alignment and structure
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} Back     alignment and structure
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A* Back     alignment and structure
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A* Back     alignment and structure
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 436
d1c3pa_372 c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [Ta 4e-26
d1t64a_364 c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human 1e-25
d3c10a1386 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 2e-20
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Histone deacetylase, HDAC
domain: HDAC homologue
species: Aquifex aeolicus [TaxId: 63363]

 Score =  106 bits (265), Expect = 4e-26
 Identities = 67/326 (20%), Positives = 123/326 (37%), Gaps = 35/326 (10%)

Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
            ++   +Y  + +   K HP    +   +  +              I +  +I+ +  ++
Sbjct: 4   KLIGTLDYGKYRY--PKNHPLKIPRVSLLLRFK--------DAMNLIDEKELIKSRPATK 53

Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPL---VAVPNYFVQKCYLRPMRYHVGGTLEAG 228
           E+LL+ HTE Y+ +L  +     + +       +      V            G T++A 
Sbjct: 54  EELLLFHTEDYINTLMEAERCQCVPKGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAI 113

Query: 229 FLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGN 288
              L+   + N  GG HHA +++  GFC   + ++ ++ L + K     + +DLDAH  +
Sbjct: 114 EEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRK-KGFKRILYIDLDAHHCD 172

Query: 289 GYEKDFMNETRIFIM----------------ETCITSKAKEAIRCRIELAPYTEDQHYLE 332
           G ++ F +  ++F++                   I     +     I L     D  +L 
Sbjct: 173 GVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLF 232

Query: 333 KIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPI 392
            +E  LE     F P++ +   GTD LL D L    +S    ++   +V    RE     
Sbjct: 233 ALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIV----REVFGEG 288

Query: 393 VMLTSGGY-LKQTARIIADSILNLAD 417
           V L  GGY     AR        L+ 
Sbjct: 289 VYLGGGGYHPYALARAWTLIWCELSG 314
>d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} Length = 364 Back     information, alignment and structure
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} Length = 386 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query436
d1t64a_364 Histone deacetylase 8, HDAC8 {Human (Homo sapiens) 100.0
d1c3pa_372 HDAC homologue {Aquifex aeolicus [TaxId: 63363]} 100.0
d3c10a1386 Histone deacetylase 7, HDAC7 {Human (Homo sapiens) 100.0
d1c3pa_372 HDAC homologue {Aquifex aeolicus [TaxId: 63363]} 99.84
d3c10a1386 Histone deacetylase 7, HDAC7 {Human (Homo sapiens) 99.84
d1t64a_364 Histone deacetylase 8, HDAC8 {Human (Homo sapiens) 99.83
>d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Histone deacetylase, HDAC
domain: Histone deacetylase 8, HDAC8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-78  Score=609.39  Aligned_cols=305  Identities=21%  Similarity=0.301  Sum_probs=275.7

Q ss_pred             EEEccccccccccCCCCCCCChHHHHHHHhhchhhHHHHHHhcCCCCCCeeeCCCCCCHHHHHhhcCHHHHHHHHhhhhh
Q psy8529         113 IVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNV  192 (436)
Q Consensus       113 ivy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~~~~~~~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yi~~l~~~~~~  192 (436)
                      +||||+|..|.    ..|||+|+|++.+.        ++|++.|+++.+++++|++|+.++|++|||++||++|++.+..
T Consensus         5 yiy~~~~~~~~----~~hP~~P~R~~~~~--------~ll~~~gl~~~~~~v~p~~At~~el~~vHs~~Yi~~l~~~~~~   72 (364)
T d1t64a_           5 YIYSPEYVSMC----DSLAKIPKRASMVH--------SLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE   72 (364)
T ss_dssp             EECCHHHHHHH----TCSSSSCCHHHHHH--------HHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHH
T ss_pred             EEeCHHHhccC----CCCCCCcHHHHHHH--------HHHHHcCCccCCEEeCCCCCCHHHHHHhCCHHHHHHHHHhhhc
Confidence            48999998873    36999999999999        9999999999999999999999999999999999999976544


Q ss_pred             hhhh--ccCCccccCCccccccchHHHHHHhccHHHHHHHhhhc--CeEEEccCCCCCCCcCCCCCccccccHHHHHHHH
Q psy8529         193 AAIS--EVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRR--GWSINIGGGFHHASETKGGGFCAYADISLLVKLL  268 (436)
Q Consensus       193 ~~~~--e~~~~~~~~d~~v~~~t~~~a~~~~gg~~~aa~~~~~~--g~a~~~~~G~HHA~~~~~~GFC~fNnvAIAa~~l  268 (436)
                      ....  +.....++.||+++++++++++.++||++.|++.++++  ..|++++||+|||++++++|||+||||||||+++
T Consensus        73 ~~~~~~~~~~~~l~~d~p~~~~~~~~~~~~aG~~l~A~~~~~~g~~~~a~~~~gg~HHA~~~~a~GFC~~NdvaiA~~~~  152 (364)
T d1t64a_          73 GDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL  152 (364)
T ss_dssp             CSSCCTTTTTTTCBTTBCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHH
T ss_pred             cccccchheeecCCCCCCCCchHHHHHHHHhhhHHHHHHHHHcCCcccccccCccccccccccccccccccHHHHHHHHH
Confidence            3221  22233467799999999999999999999999988864  4899999999999999999999999999999988


Q ss_pred             HhcCCCeEEEEEecccccCccceeccccCCCEEEEEecCCC---------------CCCCCeeEeeeCCCCCCchHHHHH
Q psy8529         269 FQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITS---------------KAKEAIRCRIELAPYTEDQHYLEK  333 (436)
Q Consensus       269 ~~~~g~~rV~IvD~D~HhGnGtq~if~~d~~V~~~SiH~~~---------------~~~~g~~~NvpL~~g~~d~~yl~~  333 (436)
                      ++  +.+||+|||||+|||||||+||++||+|+|+|+|+.+               +.++++++|||||+|++|++|+.+
T Consensus       153 ~~--~~~RV~iiD~DvHhGnGtq~iF~~d~~V~~~SiH~~~~~~~Pgtg~~~e~G~g~g~~~~~NvPL~~g~~d~~y~~~  230 (364)
T d1t64a_         153 RR--KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI  230 (364)
T ss_dssp             TT--TCSCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHH
T ss_pred             Hh--hhceEEEEecccCCCCceeeeeecCCcccccccccccCCCCCCCCChhccCCcccccceeeeecccccChHHHHHH
Confidence            65  4799999999999999999999999999999999321               123578999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCEEEEecCCCcCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCcch-HHHHHHHH
Q psy8529         334 IEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQT-ARIIADSI  412 (436)
Q Consensus       334 ~~~~l~~~~~~f~PdlivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~~a~~~~~~iv~vleGGY~~~~-~~~~~~~v  412 (436)
                      |+++|.|++++|+||+||||||||+|.+||+|.|+||+++|.+++++|++    +++|+++++|||||+.+ +++|+..+
T Consensus       231 ~~~~i~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~----~~~p~~~~~~GGY~~~~~ar~w~~~~  306 (364)
T d1t64a_         231 CESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ----WQLATLILGGGGYNLANTARCWTYLT  306 (364)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHT----TCCEEEEECCCCCSHHHHHHHHHHHH
T ss_pred             HHHhhHHHhhcCCCCEEEEECCccCCCCCCCCCCcCCHHHHHHHHHHHHh----cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998865    47899999999999876 99999999


Q ss_pred             HHHHccCCC-CCCccccccccCCC
Q psy8529         413 LNLADLGLI-SRPYNIWFIYYTSK  435 (436)
Q Consensus       413 ~~l~~~~l~-~~~~~~~~~~~~~~  435 (436)
                      ..|+|++++ .+|+|.||++|+|.
T Consensus       307 ~~l~g~~~~~~~P~~~~~~~~~p~  330 (364)
T d1t64a_         307 GVILGKTLSSEIPDHEFFTAYGPD  330 (364)
T ss_dssp             HHHHTCCCCSBCCCCTTGGGGTTT
T ss_pred             HHHcCCCCCccCCCchhhhhcCCC
Confidence            999999999 89999999999985
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure