Psyllid ID: psy8607


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
MLACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
ccHHHHHccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
cEEEEEEEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
mlacwlirvpiypsltllpslIISRAhlndlentpgahlndlenIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIyvlpqpsralcfTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
MLACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
MLACWLIRVpiypsltllpsliisRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
*LACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRD******
**ACWLIRVPIYPSLTL********AHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRA***
MLACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
MLACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLR****
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLACWLIRVPIYPSLTLLPSLIISRAHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYMIVMYLHASTILAHSCVRDLRASPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query131 2.2.26 [Sep-21-2011]
Q64L89155 Microsomal glutathione S- yes N/A 0.595 0.503 0.443 4e-09
Q91VS7155 Microsomal glutathione S- yes N/A 0.595 0.503 0.443 5e-09
P08011155 Microsomal glutathione S- yes N/A 0.595 0.503 0.443 8e-09
P10620155 Microsomal glutathione S- yes N/A 0.595 0.503 0.443 2e-08
P79382155 Microsomal glutathione S- yes N/A 0.580 0.490 0.441 2e-08
Q8HZJ2153 Prostaglandin E synthase no N/A 0.557 0.477 0.337 0.0003
>sp|Q64L89|MGST1_BOVIN Microsomal glutathione S-transferase 1 OS=Bos taurus GN=MGST1 PE=2 SV=1 Back     alignment and function desciption
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 29  NDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVL 88
           + +E    AHLNDLENI  FL I LLY ++ P +  A    R++  AR  HTI Y +  L
Sbjct: 67  DRVERVRRAHLNDLENIVPFLGIGLLYSLSGPDLSTAILHFRLFVRARIYHTIAY-LTPL 125

Query: 89  PQPSRALCFTSGVLIEVYM 107
           PQP+RAL F  G  + + M
Sbjct: 126 PQPNRALAFFIGYGVTLSM 144




Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Has a wide substrate specificity.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 8
>sp|Q91VS7|MGST1_MOUSE Microsomal glutathione S-transferase 1 OS=Mus musculus GN=Mgst1 PE=1 SV=3 Back     alignment and function description
>sp|P08011|MGST1_RAT Microsomal glutathione S-transferase 1 OS=Rattus norvegicus GN=Mgst1 PE=1 SV=3 Back     alignment and function description
>sp|P10620|MGST1_HUMAN Microsomal glutathione S-transferase 1 OS=Homo sapiens GN=MGST1 PE=1 SV=1 Back     alignment and function description
>sp|P79382|MGST1_PIG Microsomal glutathione S-transferase 1 OS=Sus scrofa GN=MGST1 PE=2 SV=3 Back     alignment and function description
>sp|Q8HZJ2|PTGES_HORSE Prostaglandin E synthase OS=Equus caballus GN=PTGES PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
321460187151 hypothetical protein DAPPUDRAFT_231546 [ 0.610 0.529 0.512 2e-17
332373216151 unknown [Dendroctonus ponderosae] 0.671 0.582 0.494 3e-17
91086441151 PREDICTED: similar to microsomal glutath 0.603 0.523 0.518 3e-17
387413558150 glutathione s-transferase M2 [Sogatella 0.786 0.686 0.456 1e-16
350535885157 uncharacterized protein LOC100165764 [Ac 0.603 0.503 0.531 2e-16
242014790154 Microsomal glutathione S-transferase, pu 0.603 0.512 0.518 2e-16
387413424150 glutathione s-transferase M2 [Nilaparvat 0.694 0.606 0.5 4e-16
321460186150 hypothetical protein DAPPUDRAFT_231548 [ 0.610 0.533 0.537 1e-15
387413474148 glutathione s-transferase M1 [Nilaparvat 0.618 0.547 0.493 3e-15
373940165152 glutathione S-transferase m [Laodelphax 0.618 0.532 0.518 3e-15
>gi|321460187|gb|EFX71232.1| hypothetical protein DAPPUDRAFT_231546 [Daphnia pulex] Back     alignment and taxonomy information
 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 58/80 (72%)

Query: 29  NDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVL 88
           +D+E    AHLNDLENI  FLIIA +Y+ T P +  A +L R++T ARF+HT+VY ++V+
Sbjct: 61  DDVERVRRAHLNDLENILPFLIIAFVYVGTGPSLGCAKFLFRLFTAARFMHTLVYAVFVI 120

Query: 89  PQPSRALCFTSGVLIEVYMI 108
           PQP+RA  F  G++  +YMI
Sbjct: 121 PQPARAFAFFGGIIANLYMI 140




Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373216|gb|AEE61749.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|91086441|ref|XP_968617.1| PREDICTED: similar to microsomal glutathione s-transferase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|387413558|gb|AFJ75813.1| glutathione s-transferase M2 [Sogatella furcifera] Back     alignment and taxonomy information
>gi|350535885|ref|NP_001233027.1| uncharacterized protein LOC100165764 [Acyrthosiphon pisum] gi|239790773|dbj|BAH71924.1| ACYPI006691 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242014790|ref|XP_002428068.1| Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] gi|212512587|gb|EEB15330.1| Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|387413424|gb|AFJ75808.1| glutathione s-transferase M2 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|321460186|gb|EFX71231.1| hypothetical protein DAPPUDRAFT_231548 [Daphnia pulex] Back     alignment and taxonomy information
>gi|387413474|gb|AFJ75810.1| glutathione s-transferase M1 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|373940165|gb|AEY80035.1| glutathione S-transferase m [Laodelphax striatella] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
FB|FBgn0025814152 Mgstl "Microsomal glutathione 0.633 0.546 0.469 6.9e-15
ZFIN|ZDB-GENE-041010-30154 mgst1 "microsomal glutathione 0.671 0.571 0.393 1.5e-12
ZFIN|ZDB-GENE-040704-59152 zgc:92357 "zgc:92357" [Danio r 0.671 0.578 0.393 5e-12
FB|FBgn0053177167 CG33177 [Drosophila melanogast 0.519 0.407 0.485 6.4e-12
UNIPROTKB|Q64L89155 MGST1 "Microsomal glutathione 0.664 0.561 0.420 9.4e-11
UNIPROTKB|F1NT14159 MGST1 "Uncharacterized protein 0.671 0.553 0.404 1.5e-10
UNIPROTKB|F1MXY2155 MGST1 "Microsomal glutathione 0.664 0.561 0.420 1.5e-10
MGI|MGI:1913850155 Mgst1 "microsomal glutathione 0.664 0.561 0.420 2e-10
UNIPROTKB|E2RHK1155 MGST1 "Uncharacterized protein 0.526 0.445 0.485 3.2e-10
RGD|70927155 Mgst1 "microsomal glutathione 0.664 0.561 0.420 3.2e-10
FB|FBgn0025814 Mgstl "Microsomal glutathione S-transferase-like" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 39/83 (46%), Positives = 51/83 (61%)

Query:    30 DLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLP 89
             ++E    AH NDLENI  F  I LLY++TDP   LA  L R   +AR +HT+VY + V+P
Sbjct:    65 NVERVRRAHRNDLENILPFFAIGLLYVLTDPAAFLAINLFRAVGIARIVHTLVYAVVVVP 124

Query:    90 QPSRALCFTSGVLIEVYMIVMYL 112
             QPSRAL F   +   VYM +  +
Sbjct:   125 QPSRALAFFVALGATVYMALQVI 147




GO:0043231 "intracellular membrane-bounded organelle" evidence=ISS
GO:0004364 "glutathione transferase activity" evidence=ISS
GO:0005741 "mitochondrial outer membrane" evidence=ISS
GO:0005811 "lipid particle" evidence=IDA
ZFIN|ZDB-GENE-041010-30 mgst1 "microsomal glutathione S-transferase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040704-59 zgc:92357 "zgc:92357" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0053177 CG33177 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q64L89 MGST1 "Microsomal glutathione S-transferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NT14 MGST1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXY2 MGST1 "Microsomal glutathione S-transferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1913850 Mgst1 "microsomal glutathione S-transferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RHK1 MGST1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|70927 Mgst1 "microsomal glutathione S-transferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
pfam01124123 pfam01124, MAPEG, MAPEG family 9e-09
>gnl|CDD|216311 pfam01124, MAPEG, MAPEG family Back     alignment and domain information
 Score = 49.6 bits (119), Expect = 9e-09
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 37  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALC 96
           AH N LEN+P FL   LL  +T    + A  L  ++ +AR LH + Y       P R+L 
Sbjct: 50  AHQNTLENLPLFLAALLLAGLTGSPGLAA-LLAWLFVVARVLHAVGY-ATGNIPPLRSLG 107

Query: 97  FTSGVLIEVYMIVM 110
           F  G L  + + ++
Sbjct: 108 FALGFLALLALALL 121


This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity. Length = 123

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 131
PF01124129 MAPEG: MAPEG family; InterPro: IPR001129 This entr 99.83
COG3686125 Predicted membrane protein [Function unknown] 99.79
COG3788131 Uncharacterized relative of glutathione S-transfer 99.3
COG5331139 Uncharacterized protein conserved in bacteria [Fun 98.32
>PF01124 MAPEG: MAPEG family; InterPro: IPR001129 This entry represents a widespread superfamily known as MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism) [] Back     alignment and domain information
Probab=99.83  E-value=2.1e-20  Score=132.59  Aligned_cols=85  Identities=34%  Similarity=0.393  Sum_probs=76.8

Q ss_pred             CChhhhHHHHHhhchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHHH
Q psy8607          28 LNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYM  107 (131)
Q Consensus        28 ~~~~~Ra~RAH~N~lEnlp~Fl~avlla~ltg~~~~~a~~la~~fviaRvlht~~Y~~~~~p~~lRsl~~~vg~~~~l~l  107 (131)
                      +++.+|++|||+|++||+|+|+++++++..+|+++..++.++++|+++|++|+.+| ..+..++.|+++|.+|+.+++.+
T Consensus        45 ~~~~~R~~ra~~N~~E~~~~f~~~~~~~~~~g~~~~~~~~l~~~~~~~R~~y~~~y-~~~~~~~~R~~~~~~~~~~~~~l  123 (129)
T PF01124_consen   45 PPWLERAQRAHQNFLENLPLFLVAVLLAILTGASPSLAALLAWVFVVARVAYAVGY-IAGNIPPLRSLGFLVGLLCLLAL  123 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-T-HHHHHHHHHHHHHHHHHHHHHH-HCSSSCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhHhhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHHHHHHHHHHHH
Confidence            34889999999999999999999999999999999999999999999999999999 68833789999999999999999


Q ss_pred             HHHHHH
Q psy8607         108 IVMYLH  113 (131)
Q Consensus       108 ~~~~l~  113 (131)
                      .+..++
T Consensus       124 ~~~~~~  129 (129)
T PF01124_consen  124 ALAALY  129 (129)
T ss_dssp             HHHHHH
T ss_pred             HHHHHC
Confidence            988753



Included are: 5-lipoxygenase activating protein (gene FLAP), which seems to be required for the activation of 5-lipoxygenase. Leukotriene C4 synthase (2.5.1.37 from EC), which catalyses the production of LTC4 from LTA4. Microsomal glutathione S-transferase II (2.5.1.18 from EC) (GST-II), which also produces LTC4 from LTA4. Prostaglandin E synthase, which catalyses the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.; PDB: 3DWW_A 2Q7R_D 2Q7M_B 2PNO_J 3B29_A 3HKK_A 2UUI_A 3PCV_A 2UUH_A 3LEO_A ....

>COG3686 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only] Back     alignment and domain information
>COG5331 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
2h8a_A154 Structure Of Microsomal Glutathione Transferase 1 I 5e-10
>pdb|2H8A|A Chain A, Structure Of Microsomal Glutathione Transferase 1 In Complex With Glutathione Length = 154 Back     alignment and structure

Iteration: 1

Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 29 NDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVL 88 +E AHLNDLENI FL I LLY ++ P + A RI+ AR HTI Y + L Sbjct: 66 EKVERVRRAHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPL 124 Query: 89 PQPSRALCFTSGVLIEVYM 107 PQP+R L F G + + M Sbjct: 125 PQPNRGLAFFVGYGVTLSM 143

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
3dww_A158 Prostaglandin E synthase; membrane protein, four h 3e-23
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 3e-22
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Length = 158 Back     alignment and structure
 Score = 87.4 bits (216), Expect = 3e-23
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 30  DLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLP 89
           D+E    AH ND+E I  FL +  +Y    P   +A     ++ + R  HT+ Y +  L 
Sbjct: 70  DVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAY-LGKLR 128

Query: 90  QPSRALCFTSGVLIEVYMIVMYLHAST 116
            P R++ +T   L    M +  L  + 
Sbjct: 129 APIRSVTYTLAQLPCASMALQILWEAA 155


>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query131
3dww_A158 Prostaglandin E synthase; membrane protein, four h 99.9
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 99.84
3pcv_A156 Leukotriene C4 synthase; membrane protein, helix b 99.76
2q7r_A161 Arachidonate 5-lipoxygenase-activating protein; fl 99.74
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Back     alignment and structure
Probab=99.90  E-value=6e-24  Score=160.02  Aligned_cols=89  Identities=27%  Similarity=0.407  Sum_probs=84.4

Q ss_pred             cCCChhhhHHHHHhhchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHH
Q psy8607          26 AHLNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEV  105 (131)
Q Consensus        26 ~~~~~~~Ra~RAH~N~lEnlp~Fl~avlla~ltg~~~~~a~~la~~fviaRvlht~~Y~~~~~p~~lRsl~~~vg~~~~l  105 (131)
                      +|||++||++|||+|++||+|+|+++++++.++|+++.++..++++|+++|++|+.+| ..+.|++.|+++|.+|+++++
T Consensus        66 ~~~~~~~Ra~RAh~N~lE~~p~Fl~~~ll~~l~g~~~~~~~~l~~~fv~~Rilh~~~Y-~~~~p~~~Rsl~~~vg~~~~~  144 (158)
T 3dww_A           66 RSDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAY-LGKLRAPIRSVTYTLAQLPCA  144 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHT-TSSCCGGGGHHHHHHHHSSHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH-HcCCCccHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999999999999999999999 788878999999999999999


Q ss_pred             HHHHHHHHHH
Q psy8607         106 YMIVMYLHAS  115 (131)
Q Consensus       106 ~l~~~~l~~~  115 (131)
                      .|++++++.+
T Consensus       145 ~m~~~~l~~~  154 (158)
T 3dww_A          145 SMALQILWEA  154 (158)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875



>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Back     alignment and structure
>3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* Back     alignment and structure
>2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 131
d2h8aa1139 f.56.1.1 (A:9-147) Microsomal glutathione S-transf 6e-15
d2uuia1146 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human 1e-05
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 139 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Microsomal glutathione S-transferase 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
 Score = 64.5 bits (157), Expect = 6e-15
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 37  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALC 96
           AHLNDLENI  FL I LLY ++ P +  A    RI+  AR  HTI Y +  LPQP+R L 
Sbjct: 66  AHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLA 124

Query: 97  FTSGVLIEVYMIV 109
           F  G  + + M  
Sbjct: 125 FFVGYGVTLSMAY 137


>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query131
d2h8aa1139 Microsomal glutathione S-transferase 1 {Rat (Rattu 99.89
d2uuia1146 Leukotriene C4 synthase {Human (Homo sapiens) [Tax 99.63
d2q7ra1139 Arachidonate 5-lipoxygenase-activating protein, FL 99.54
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Microsomal glutathione S-transferase 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.89  E-value=9.9e-25  Score=158.85  Aligned_cols=82  Identities=43%  Similarity=0.596  Sum_probs=78.7

Q ss_pred             CChhhhHHHHHhhchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHHH
Q psy8607          28 LNDLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALCFTSGVLIEVYM  107 (131)
Q Consensus        28 ~~~~~Ra~RAH~N~lEnlp~Fl~avlla~ltg~~~~~a~~la~~fviaRvlht~~Y~~~~~p~~lRsl~~~vg~~~~l~l  107 (131)
                      +|++||++|||+|++||+|+|+++++++.++|+++..+..++++|+++|++|++.| +.+.|+|+|++.|.+|++++++|
T Consensus        57 ~~~v~R~~rah~N~~E~~~~F~~~~l~~~~~~~~~~~~~~l~~~f~~~Ri~h~~~y-~~~~~~p~R~~~~~~g~~~~~~m  135 (139)
T d2h8aa1          57 DEKVERVRRAHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLAFFVGYGVTLSM  135 (139)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHTTTSCCCSTTHHHHHHHHHHHHHHHHHHH-HSSCSHHHHHHHHHHHTHHHHHH
T ss_pred             CHHHHHHHHHHHcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HhcCCccHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999999999 79987789999999999999999


Q ss_pred             HHH
Q psy8607         108 IVM  110 (131)
Q Consensus       108 ~~~  110 (131)
                      +++
T Consensus       136 ~~~  138 (139)
T d2h8aa1         136 AYR  138 (139)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            986



>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure