Psyllid ID: psy8628

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MLHIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLSV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mlhiaryghwhkdraqqqvknvpRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIigsshimtpedflnnlsnlsv
Flexible Loop (DISEMBL)
mlhiaryghwhkdraqqqvknvPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSshimtpedflnnlsnlsv
Low Complexity Region (SEG)
MLHIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLSV
Disordered region (IsUnstruct)
***IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDF*********
Disordered Region (DISOPRED)
**HIARYG*****************IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS*
Disordered Region (DISEMBL)
MLHIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLSV
Disordered Region (DISPRO)
MLHIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLHIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q07327	597	Protein ROP OS=Drosophila	yes	N/A	0.933	0.117	0.757	3e-29
P61765	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
Q5R6D2	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
O08599	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
P61764	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
Q6R748	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
P61763	594	Syntaxin-binding protein	yes	N/A	0.933	0.117	0.571	1e-20
P34815	673	Putative acetylcholine re	no	N/A	0.933	0.104	0.591	2e-19
Q64324	593	Syntaxin-binding protein	no	N/A	0.92	0.116	0.571	1e-18
Q28288	593	Syntaxin-binding protein	no	N/A	0.92	0.116	0.542	4e-18

>sp|Q07327|ROP_DROME Protein ROP OS=Drosophila melanogaster GN=Rop PE=2 SV=2

 Score =  126 bits (317), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/70 (75%), Positives = 64/70 (91%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ Q QVKNVPRLIVFI+GGVS SE+RCAYEVTN V+NWEV++GSSHI++PE
Sbjct: 525 ARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGSSHILSPE 584

Query: 65  DFLNNLSNLS 74
            FL++L +LS
Sbjct: 585 IFLSDLGSLS 594

May be a component of one of the vesicle trafficking pathways. May interact functionally with Ras2 protein.
Drosophila melanogaster (taxid: 7227)

>sp|P61765|STXB1_RAT Syntaxin-binding protein 1 OS=Rattus norvegicus GN=Stxbp1 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Rattus norvegicus (taxid: 10116)

>sp|Q5R6D2|STXB1_PONAB Syntaxin-binding protein 1 OS=Pongo abelii GN=STXBP1 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Pongo abelii (taxid: 9601)

>sp|O08599|STXB1_MOUSE Syntaxin-binding protein 1 OS=Mus musculus GN=Stxbp1 PE=1 SV=2

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Mus musculus (taxid: 10090)

>sp|P61764|STXB1_HUMAN Syntaxin-binding protein 1 OS=Homo sapiens GN=STXBP1 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Homo sapiens (taxid: 9606)

>sp|Q6R748|STXB1_CHICK Syntaxin-binding protein 1 OS=Gallus gallus GN=STXBP1 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxins, components of the synaptic vesicle fusion machinery. May play a role in determining the specificity of intracellular fusion reactions.

Gallus gallus (taxid: 9031)

>sp|P61763|STXB1_BOVIN Syntaxin-binding protein 1 OS=Bos taurus GN=STXBP1 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Bos taurus (taxid: 9913)

>sp|P34815|UNC18_CAEEL Putative acetylcholine regulator unc-18 OS=Caenorhabditis elegans GN=unc-18 PE=2 SV=3

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)

Query: 5   ARYGHWHKDRAQQ-QVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP 63
           ARYG WHK+R QQ   ++ PRLI++IIGGV+FSE+R  YEVT   K WEV+IGS  I+TP
Sbjct: 598 ARYGQWHKERGQQSNYRSGPRLIIYIIGGVTFSEMRACYEVTAARKPWEVVIGSDRIITP 657

Query: 64  EDFLNNLSNLS 74
           + FL NL +L+
Sbjct: 658 DKFLTNLRDLN 668

May participate in the axonal transport system and influences the acetylcholine flow in motor neurons.

Caenorhabditis elegans (taxid: 6239)

>sp|Q64324|STXB2_MOUSE Syntaxin-binding protein 2 OS=Mus musculus GN=Stxbp2 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTP 63
           AR+GHWHK++A  + +  PRLIV+I+GGV+ SE+R AYEVT   +  WEV+IGSSHI+TP
Sbjct: 514 ARFGHWHKNKAGVEARAGPRLIVYIVGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTP 573

Query: 64  EDFLNNLSNL 73
             FL++L  L
Sbjct: 574 TRFLDDLKTL 583

Involved in intracellular vesicle trafficking and vesicle fusion with membranes. Contributes to the granule exocytosis machinery through interaction with soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) proteins that regulate membrane fusion. Regulates cytotoxic granule exocytosis in natural killer (NK) cells.

Mus musculus (taxid: 10090)

>sp|Q28288|STXB2_CANFA Syntaxin-binding protein 2 OS=Canis familiaris GN=STXBP2 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTP 63
           AR+GHWHK++A  +++  PRLI++++GGV+ SE+R AYEVT      WEV+IGSSHI+TP
Sbjct: 514 ARFGHWHKNKAGVEMRAGPRLIIYVMGGVAMSEMRAAYEVTRATDGKWEVLIGSSHILTP 573

Query: 64  EDFLNNLSNL 73
             FL++L  L
Sbjct: 574 TRFLDDLKTL 583

Involved in the protein trafficking from the Golgi apparatus to the plasma membrane.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
242020286	585	protein ROP, putative [Pediculus humanus	0.92	0.117	0.913	9e-32
193636538	590	PREDICTED: protein ROP-like isoform 1 [A	0.933	0.118	0.857	1e-31
193636540	590	PREDICTED: protein ROP-like isoform 2 [A	0.933	0.118	0.857	2e-31
307213344	573	Protein ROP [Harpegnathos saltator]	0.946	0.123	0.788	9e-29
332026520	634	Protein ROP [Acromyrmex echinatior]	0.946	0.111	0.788	1e-28
307182455	648	Protein ROP [Camponotus floridanus]	0.946	0.109	0.788	2e-28
195055482	600	GH17352 [Drosophila grimshawi] gi|193892	0.933	0.116	0.757	3e-28
195448018	599	GK25120 [Drosophila willistoni] gi|19416	0.933	0.116	0.757	6e-28
328718858	494	PREDICTED: protein ROP-like [Acyrthosiph	0.933	0.141	0.777	9e-28
311370	597	Rop [Drosophila melanogaster] gi|311372|	0.946	0.118	0.746	9e-28

>gi|242020286|ref|XP_002430586.1| protein ROP, putative [Pediculus humanus corporis] gi|212515758|gb|EEB17848.1| protein ROP, putative [Pediculus humanus corporis]

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 6   RYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPED 65
           RYGHWHKD+AQQ VKNVPRLIVFIIGGV FSEIRCAYEVTN VKNWEVIIGSSHIMTPED
Sbjct: 516 RYGHWHKDKAQQTVKNVPRLIVFIIGGVCFSEIRCAYEVTNAVKNWEVIIGSSHIMTPED 575

Query: 66  FLNNLSNLS 74
           FL+NL NLS
Sbjct: 576 FLSNLCNLS 584

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193636538|ref|XP_001951920.1| PREDICTED: protein ROP-like isoform 1 [Acyrthosiphon pisum]

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ QQ +KNVPR+IVF+IGGVSFSEIRCAYEVTNN KNWEVIIGSSH++TPE
Sbjct: 520 ARYGHWHKDKGQQLIKNVPRVIVFVIGGVSFSEIRCAYEVTNNFKNWEVIIGSSHVLTPE 579

Query: 65  DFLNNLSNLS 74
           DFLNNLS LS
Sbjct: 580 DFLNNLSALS 589

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193636540|ref|XP_001951931.1| PREDICTED: protein ROP-like isoform 2 [Acyrthosiphon pisum]

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ QQ +KNVPR+IVF+IGGVSFSEIRCAYEVTNN KNWEVIIGSSH++TPE
Sbjct: 520 ARYGHWHKDKGQQLIKNVPRVIVFVIGGVSFSEIRCAYEVTNNFKNWEVIIGSSHVLTPE 579

Query: 65  DFLNNLSNLS 74
           DFLNNLS LS
Sbjct: 580 DFLNNLSALS 589

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213344|gb|EFN88796.1| Protein ROP [Harpegnathos saltator]

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 64/71 (90%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ QQ +KNVPRLIVFI+GGV FSEIRCAYEVTN +KNWEVIIGSSH++TP+
Sbjct: 503 ARYGHWHKDKGQQTIKNVPRLIVFIVGGVCFSEIRCAYEVTNALKNWEVIIGSSHVITPK 562

Query: 65  DFLNNLSNLSV 75
            FLN+LS L V
Sbjct: 563 SFLNDLSKLHV 573

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026520|gb|EGI66641.1| Protein ROP [Acromyrmex echinatior]

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 64/71 (90%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ QQ +KNVPRLIVFI+GG+ FSEIRCAYEVTN +KNWEVIIGSSHI+TP+
Sbjct: 564 ARYGHWHKDKGQQTIKNVPRLIVFIVGGMCFSEIRCAYEVTNALKNWEVIIGSSHIITPK 623

Query: 65  DFLNNLSNLSV 75
            FLN+LS L V
Sbjct: 624 SFLNDLSKLHV 634

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182455|gb|EFN69690.1| Protein ROP [Camponotus floridanus]

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 64/71 (90%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+ QQ +KNVPRLIVFI+GGV FSEIRCAYEVTN +KNWEVIIGSSHI+TP+
Sbjct: 578 ARYGHWHKDKGQQTIKNVPRLIVFIVGGVCFSEIRCAYEVTNALKNWEVIIGSSHIITPK 637

Query: 65  DFLNNLSNLSV 75
            FLN+LS + V
Sbjct: 638 SFLNDLSKVHV 648

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195055482|ref|XP_001994648.1| GH17352 [Drosophila grimshawi] gi|193892411|gb|EDV91277.1| GH17352 [Drosophila grimshawi]

 Score =  129 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/70 (75%), Positives = 65/70 (92%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+AQ QVKNVPRLI+F++GGVS SE+RCAYEVTN V+NWEV+IGSSH++TPE
Sbjct: 528 ARYGHWHKDKAQAQVKNVPRLIIFVVGGVSMSEMRCAYEVTNTVRNWEVLIGSSHVLTPE 587

Query: 65  DFLNNLSNLS 74
            FL++L +LS
Sbjct: 588 IFLSDLGSLS 597

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195448018|ref|XP_002071473.1| GK25120 [Drosophila willistoni] gi|194167558|gb|EDW82459.1| GK25120 [Drosophila willistoni]

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/70 (75%), Positives = 66/70 (94%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHKD+AQ QVKNVPRLI+FI+GGVS SE+RCAYEVTN+V+NWEV+IGSSH+++PE
Sbjct: 527 ARYGHWHKDKAQAQVKNVPRLIIFIVGGVSMSEMRCAYEVTNSVRNWEVLIGSSHVLSPE 586

Query: 65  DFLNNLSNLS 74
            FL++L +LS
Sbjct: 587 IFLSDLGSLS 596

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328718858|ref|XP_001945931.2| PREDICTED: protein ROP-like [Acyrthosiphon pisum]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 2/72 (2%)

Query: 5   ARYGHWHKDRAQ--QQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT 62
           ARYGHWHKDR +  Q +KNVPR+I+F+IGG+SFSE+RCAYEVT+NVKNWEVIIG+SHI+T
Sbjct: 422 ARYGHWHKDRGKSHQLLKNVPRVIIFVIGGISFSEMRCAYEVTSNVKNWEVIIGASHILT 481

Query: 63  PEDFLNNLSNLS 74
           PEDF+NNLS LS
Sbjct: 482 PEDFINNLSALS 493

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|311370|emb|CAA47658.1| Rop [Drosophila melanogaster] gi|311372|emb|CAA47659.1| Rop [Drosophila melanogaster]

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/71 (74%), Positives = 65/71 (91%)

Query: 4   IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP 63
           +ARYGHWHKD+ Q QVKNVPRLIVFI+GGVS SE+RCAYEVTN V+NWEV++GSSHI++P
Sbjct: 524 LARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGSSHILSP 583

Query: 64  EDFLNNLSNLS 74
           E FL++L +LS
Sbjct: 584 EIFLSDLGSLS 594

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
FB|FBgn0004574	597	Rop "Ras opposite" [Drosophila	0.933	0.117	0.757	6.8e-26
UNIPROTKB|J9NUA1	548	STXBP1 "Uncharacterized protei	0.933	0.127	0.571	1.7e-18
UNIPROTKB|J9NTI1	580	STXBP1 "Uncharacterized protei	0.933	0.120	0.571	2e-18
UNIPROTKB|Q6R748	594	STXBP1 "Syntaxin-binding prote	0.933	0.117	0.571	2.1e-18
UNIPROTKB|P61763	594	STXBP1 "Syntaxin-binding prote	0.933	0.117	0.571	2.1e-18
UNIPROTKB|P61764	594	STXBP1 "Syntaxin-binding prote	0.933	0.117	0.571	2.1e-18
MGI|MGI:107363	594	Stxbp1 "syntaxin binding prote	0.933	0.117	0.571	2.1e-18
RGD|3785	594	Stxbp1 "syntaxin binding prote	0.933	0.117	0.571	2.1e-18
ZFIN|ZDB-GENE-040426-2482	595	stxbp2 "syntaxin binding prote	0.92	0.115	0.585	2.7e-18
UNIPROTKB|F1P7D2	591	STXBP1 "Uncharacterized protei	0.88	0.111	0.606	5.5e-18

FB|FBgn0004574 Rop "Ras opposite" [Drosophila melanogaster (taxid:7227)]

 Score = 300 (110.7 bits), Expect = 6.8e-26, P = 6.8e-26
 Identities = 53/70 (75%), Positives = 64/70 (91%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHKD+ Q QVKNVPRLIVFI+GGVS SE+RCAYEVTN V+NWEV++GSSHI++PE
Sbjct:   525 ARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGSSHILSPE 584

Query:    65 DFLNNLSNLS 74
              FL++L +LS
Sbjct:   585 IFLSDLGSLS 594

GO:0009416 "response to light stimulus" evidence=IMP

GO:0007268 "synaptic transmission" evidence=NAS;IDA;TAS

GO:0007269 "neurotransmitter secretion" evidence=NAS;IMP;TAS

GO:0043195 "terminal bouton" evidence=IDA

GO:0032940 "secretion by cell" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0019898 "extrinsic to membrane" evidence=IDA

GO:0006887 "exocytosis" evidence=NAS;TAS

GO:0019905 "syntaxin binding" evidence=NAS

GO:0012506 "vesicle membrane" evidence=NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0016192 "vesicle-mediated transport" evidence=ISS;NAS

GO:0007317 "regulation of pole plasm oskar mRNA localization" evidence=IMP

GO:0016082 "synaptic vesicle priming" evidence=NAS

GO:0000149 "SNARE binding" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0048489 "synaptic vesicle transport" evidence=TAS

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

UNIPROTKB|J9NUA1 STXBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 231 (86.4 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   471 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 530

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   531 KLLDTLKKLN 540

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

UNIPROTKB|J9NTI1 STXBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 231 (86.4 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   503 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 562

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   563 KLLDTLKKLN 572

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

UNIPROTKB|Q6R748 STXBP1 "Syntaxin-binding protein 1" [Gallus gallus (taxid:9031)]

 Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   577 KLLDTLKKLN 586

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|P61763 STXBP1 "Syntaxin-binding protein 1" [Bos taurus (taxid:9913)]

 Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   577 KLLDTLKKLN 586

GO:0016188 "synaptic vesicle maturation" evidence=ISS

GO:0007412 "axon target recognition" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

UNIPROTKB|P61764 STXBP1 "Syntaxin-binding protein 1" [Homo sapiens (taxid:9606)]

 Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   577 KLLDTLKKLN 586

GO:0015031 "protein transport" evidence=IEA

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0045956 "positive regulation of calcium ion-dependent exocytosis" evidence=IEA

GO:0047485 "protein N-terminus binding" evidence=IEA

GO:0050821 "protein stabilization" evidence=IEA

GO:0060292 "long term synaptic depression" evidence=IEA

GO:0031091 "platelet alpha granule" evidence=IDA

GO:0019905 "syntaxin binding" evidence=IPI

GO:0070527 "platelet aggregation" evidence=IMP

GO:0005737 "cytoplasm" evidence=ISS

GO:0010807 "regulation of synaptic vesicle priming" evidence=ISS

GO:0017075 "syntaxin-1 binding" evidence=ISS

GO:0007412 "axon target recognition" evidence=ISS

GO:0032229 "negative regulation of synaptic transmission, GABAergic" evidence=ISS

GO:0042802 "identical protein binding" evidence=ISS

GO:0000149 "SNARE binding" evidence=ISS

GO:0043234 "protein complex" evidence=ISS

GO:0016188 "synaptic vesicle maturation" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0002576 "platelet degranulation" evidence=IMP

GO:0005829 "cytosol" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007269 "neurotransmitter secretion" evidence=TAS

GO:0014047 "glutamate secretion" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0050796 "regulation of insulin secretion" evidence=TAS

MGI|MGI:107363 Stxbp1 "syntaxin binding protein 1" [Mus musculus (taxid:10090)]

 Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   577 KLLDTLKKLN 586

GO:0000149 "SNARE binding" evidence=ISO

GO:0002576 "platelet degranulation" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006887 "exocytosis" evidence=IMP

GO:0006904 "vesicle docking involved in exocytosis" evidence=IMP

GO:0007269 "neurotransmitter secretion" evidence=IMP

GO:0007274 "neuromuscular synaptic transmission" evidence=IMP

GO:0007412 "axon target recognition" evidence=IMP

GO:0010807 "regulation of synaptic vesicle priming" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016188 "synaptic vesicle maturation" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0017075 "syntaxin-1 binding" evidence=ISO;IPI

GO:0019901 "protein kinase binding" evidence=ISO

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0019905 "syntaxin binding" evidence=ISO

GO:0031091 "platelet alpha granule" evidence=ISO

GO:0032229 "negative regulation of synaptic transmission, GABAergic" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IMP

GO:0045956 "positive regulation of calcium ion-dependent exocytosis" evidence=IDA

GO:0047485 "protein N-terminus binding" evidence=ISO

GO:0050821 "protein stabilization" evidence=ISO

GO:0060292 "long term synaptic depression" evidence=IMP

GO:0070527 "platelet aggregation" evidence=ISO

RGD|3785 Stxbp1 "syntaxin binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct:   517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query:    65 DFLNNLSNLS 74
               L+ L  L+
Sbjct:   577 KLLDTLKKLN 586

GO:0000149 "SNARE binding" evidence=IDA

GO:0002576 "platelet degranulation" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006887 "exocytosis" evidence=ISO

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA;ISO

GO:0007269 "neurotransmitter secretion" evidence=IEA;ISO

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA;ISO

GO:0007412 "axon target recognition" evidence=IEA;ISO

GO:0010807 "regulation of synaptic vesicle priming" evidence=IMP

GO:0015031 "protein transport" evidence=IEA

GO:0016188 "synaptic vesicle maturation" evidence=IEA;ISO

GO:0017075 "syntaxin-1 binding" evidence=ISO;IDA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0019904 "protein domain specific binding" evidence=IDA

GO:0019905 "syntaxin binding" evidence=ISO;IDA

GO:0031091 "platelet alpha granule" evidence=IEA;ISO

GO:0032229 "negative regulation of synaptic transmission, GABAergic" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=IPI

GO:0043234 "protein complex" evidence=IDA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA;ISO

GO:0045956 "positive regulation of calcium ion-dependent exocytosis" evidence=IEA;ISO

GO:0047485 "protein N-terminus binding" evidence=IDA

GO:0050821 "protein stabilization" evidence=IDA

GO:0060292 "long term synaptic depression" evidence=IEA;ISO

GO:0070527 "platelet aggregation" evidence=IEA;ISO

ZFIN|ZDB-GENE-040426-2482 stxbp2 "syntaxin binding protein 2" [Danio rerio (taxid:7955)]

 Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
 Identities = 41/70 (58%), Positives = 55/70 (78%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKN-WEVIIGSSHIMTP 63
             AR+GHWHK+++  + ++ PRLI+F+IGGV+ SE+RCAYEVT      WEV+IGSSHI+TP
Sbjct:   517 ARFGHWHKNKSATEYRSGPRLIIFVIGGVTHSEMRCAYEVTRATGGKWEVLIGSSHIITP 576

Query:    64 EDFLNNLSNL 73
               FLN+L  L
Sbjct:   577 TSFLNDLKEL 586

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

UNIPROTKB|F1P7D2 STXBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 227 (85.0 bits), Expect = 5.5e-18, P = 5.5e-18
 Identities = 40/66 (60%), Positives = 53/66 (80%)

Query:     5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
             ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP 
Sbjct:   505 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPT 564

Query:    65 DFLNNL 70
              FL +L
Sbjct:   565 KFLMDL 570

GO:0070527 "platelet aggregation" evidence=IEA

GO:0060292 "long term synaptic depression" evidence=IEA

GO:0045956 "positive regulation of calcium ion-dependent exocytosis" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0032229 "negative regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0031091 "platelet alpha granule" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IEA

GO:0016188 "synaptic vesicle maturation" evidence=IEA

GO:0007412 "axon target recognition" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007269 "neurotransmitter secretion" evidence=IEA

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0002576 "platelet degranulation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6R748	STXB1_CHICK	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A
Q5R6D2	STXB1_PONAB	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A
Q07327	ROP_DROME	No assigned EC number	0.7571	0.9333	0.1172	yes	N/A
O08599	STXB1_MOUSE	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A
P61763	STXB1_BOVIN	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A
P61764	STXB1_HUMAN	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A
P61765	STXB1_RAT	No assigned EC number	0.5714	0.9333	0.1178	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	75
pfam00995	554	pfam00995, Sec1, Sec1 family	3e-19
COG5158	582	COG5158, SEC1, Proteins involved in synaptic trans	2e-09

>gnl|CDD|216231 pfam00995, Sec1, Sec1 family

 Score = 79.2 bits (196), Expect = 3e-19
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 11  HKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70
               A Q  +   R+IVF++GGV++SE R  YE++       VIIGS+ I+ PE FL  L
Sbjct: 495 RPTAAGQGRQPPQRIIVFVVGGVTYSEARALYELSKKTNGKRVIIGSTSILNPESFLEEL 554

Length = 554

>gnl|CDD|227487 COG5158, SEC1, Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]

 Score = 51.7 bits (124), Expect = 2e-09
 Identities = 20/51 (39%), Positives = 35/51 (68%)

Query: 24  RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74
           R++VF+IGGV++ E+R  YE+  +  +  +I GS+ I+TP +FL+ +  L 
Sbjct: 528 RILVFVIGGVTYEELRVLYELNESQNSVRIIYGSTEILTPAEFLDEVKRLG 578

Length = 582

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
KOG1300|consensus	593		99.82
PF00995	564	Sec1: Sec1 family; InterPro: IPR001619 Sec1-like m	99.66
COG5158	582	SEC1 Proteins involved in synaptic transmission an	99.52
KOG1299|consensus	549		99.44
KOG1301|consensus	621		99.24
KOG1302|consensus	600		99.02
PRK05581	220	ribulose-phosphate 3-epimerase; Validated	87.99
PRK08883	220	ribulose-phosphate 3-epimerase; Provisional	83.7
KOG0148|consensus	321		83.12
PLN02334	229	ribulose-phosphate 3-epimerase	82.9
cd00564	196	TMP_TenI Thiamine monophosphate synthase (TMP synt	82.85

>KOG1300|consensus

Probab=99.82  E-value=3e-20  Score=145.35  Aligned_cols=68  Identities=54%  Similarity=0.871  Sum_probs=64.0

Q ss_pred             cccccCCCcCCCcc-cccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628           3 HIARYGHWHKDRAQ-QQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS   71 (75)
Q Consensus         3 ~s~~~~~w~~~~~~-~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~   71 (75)
                      .|||+|+|.+++.+ ....++|++||||+||+||+|+|++|++++++ +++|+||||+|++|.+|++.|.
T Consensus       514 ~Sar~~~~~~~k~~~~~~~~g~ri~VfIiGGvT~SEmRvaYevs~~~-~~EViiGS~~iltP~~fL~~lk  582 (593)
T KOG1300|consen  514 TSARYGHPLSNKTPSAFKKPGQRIIVFIIGGVTFSEMRVAYEVSEKL-NREVIIGSDHILTPTKFLDDLK  582 (593)
T ss_pred             ccccccCcccccCcchhhccCceEEEEEeCCccHHHHHHHHHHHHhh-CceEEECCcccCCHHHHHHHHh
Confidence            48999999998887 67889999999999999999999999999998 6999999999999999999997

>PF00995 Sec1: Sec1 family; InterPro: IPR001619 Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis []

Probab=99.66  E-value=1.3e-16  Score=120.79  Aligned_cols=52  Identities=46%  Similarity=0.810  Sum_probs=45.3

Q ss_pred             cCCCCeEEEEEECCCCHHHHHHHHHHHhhc-CCceEEEecccccChHHHHHHH
Q psy8628          19 VKNVPRLIVFIIGGVSFSEIRCAYEVTNNV-KNWEVIIGSSHIMTPEDFLNNL   70 (75)
Q Consensus        19 ~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~-~~~~iiiGst~il~~~~fl~~l   70 (75)
                      ..+++++|||||||+||+|++++++++++. ++++|+||||+|+||++|+++|
T Consensus       512 ~~~~~~viVf~vGGvTy~Ei~~l~~l~~~~~~~~~iiigsT~il~~~~fl~~L  564 (564)
T PF00995_consen  512 NKPRKRVIVFFVGGVTYSEIRALRELSKKLGPGKEIIIGSTSILNPNDFLESL  564 (564)
T ss_dssp             -S-SSEEEEEEETEBEHHHHHHHHHHHTTSSSSSEEEEEESSBE-HHHHHHHH
T ss_pred             cCCCCEEEEEEEcCCcHHHHHHHHHHHHhhCCCcEEEEEeCCccCHHHHHHhC
Confidence            456688999999999999999999999987 2499999999999999999986

They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion []. ; GO: 0006904 vesicle docking involved in exocytosis, 0016192 vesicle-mediated transport; PDB: 3C98_A 3PUJ_B 1FVH_A 1FVF_A 1EPU_A 2XHE_A 1MQS_A 2PJX_A 3PUK_A 1Y9J_A.

>COG5158 SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]

Probab=99.52  E-value=2.5e-14  Score=112.53  Aligned_cols=63  Identities=33%  Similarity=0.704  Sum_probs=55.5

Q ss_pred             CCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcC
Q psy8628           9 HWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL   73 (75)
Q Consensus         9 ~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l   73 (75)
                      .| +.+.. ...++++++|||+||+||+|++.+++++.+.++++|++|||.|++|.+||+++..+
T Consensus       515 k~-~~~~~-~~~~~~~~~VfviGG~ty~E~~~~~e~~~~~~~~~ii~Gst~iltp~e~l~~v~~~  577 (582)
T COG5158         515 KG-RSRSN-KKIPQQRILVFVIGGVTYEELRVLYELNESQNSVRIIYGSTEILTPAEFLDEVKRL  577 (582)
T ss_pred             cc-ccccc-cccccceEEEEEECCeehHHHHHHHHHHhhcCCeeEEEcCCceecHHHHHHHHHHh
Confidence            46 54554 67788999999999999999999999999875589999999999999999999765

>KOG1299|consensus

Probab=99.44  E-value=1.9e-13  Score=105.91  Aligned_cols=56  Identities=21%  Similarity=0.516  Sum_probs=52.0

Q ss_pred             ccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcC
Q psy8628          18 QVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL   73 (75)
Q Consensus        18 ~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l   73 (75)
                      ...++|.|||||+||+||||++.+++++..+++.+|++|||.|+|...|++++...
T Consensus       493 s~~~pq~IIVfivGGaTYEEa~~V~~~N~tn~g~rvvLgGttvlntk~f~~di~~a  548 (549)
T KOG1299|consen  493 SRDRPQDIIVFIVGGATYEEARVVHELNATNPGVRVVLGGTTVLNTKSFIDEIMAA  548 (549)
T ss_pred             ccCCCceEEEEEECCccHHHHHHHHHHhcCCCceEEEEcceEEechHHHHHHHhcc
Confidence            45678999999999999999999999998889999999999999999999998754

>KOG1301|consensus

Probab=99.24  E-value=8.8e-12  Score=97.81  Aligned_cols=57  Identities=26%  Similarity=0.506  Sum_probs=51.4

Q ss_pred             ccCCCCeEEEEEECCCCHHHHHHHHHHHhhcC-CceEEEecccccChHHHHHHHhcCC
Q psy8628          18 QVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus        18 ~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~-~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .+.+.++.|||||||.+|-|+..+.++.+... .++||+|+|.|+||.+|++++..|+
T Consensus       558 ~r~~f~eaIVFvVGGGNYiEYqnL~d~~krq~~~krIiYGsTeIln~~eFl~qls~Lg  615 (621)
T KOG1301|consen  558 KRQPFQEAIVFVVGGGNYIEYQNLVDLAKRQQTVKRIIYGSTEILNAREFLEQLSRLG  615 (621)
T ss_pred             cccchhheEEEEEcCcCeeehhhHHHHHHhhcccceeEecchhcCCHHHHHHHHHHhc
Confidence            45677999999999999999999999998653 4799999999999999999999876

>KOG1302|consensus

Probab=99.02  E-value=7e-10  Score=87.77  Aligned_cols=49  Identities=16%  Similarity=0.425  Sum_probs=45.3

Q ss_pred             CCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628          21 NVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL   70 (75)
Q Consensus        21 ~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l   70 (75)
                      ..+.++|||+||+||+|+++++++++.. +.+++|.+|.++|+.++|+.+
T Consensus       551 ~~R~~lVff~GG~T~~EIAalr~l~~~~-~~~f~i~Tt~ling~~ll~~~  599 (600)
T KOG1302|consen  551 ALRVTLVFFLGGCTYAEIAALRFLAKLE-GYRFLIATTGLINGSSLLEAI  599 (600)
T ss_pred             CcceEEEEEECCccHHHHHHHHHHHhhc-CceEEEEeccccchHHHHHhh
Confidence            4677999999999999999999999876 699999999999999999876

>PRK05581 ribulose-phosphate 3-epimerase; Validated

Probab=87.99  E-value=0.94  Score=30.63  Aligned_cols=42  Identities=17%  Similarity=0.401  Sum_probs=30.5

Q ss_pred             EEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628          25 LIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS   71 (75)
Q Consensus        25 iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~   71 (75)
                      ..|.+.||+|-+.++.+.+    . +.++++.|+.|.+.++..+.+.
T Consensus       171 ~~i~v~GGI~~~nv~~l~~----~-GaD~vvvgSai~~~~d~~~~~~  212 (220)
T PRK05581        171 ILIEVDGGINADNIKECAE----A-GADVFVAGSAVFGAPDYKEAID  212 (220)
T ss_pred             ceEEEECCCCHHHHHHHHH----c-CCCEEEEChhhhCCCCHHHHHH
Confidence            5678899999977766654    2 5788888899987666544443

>PRK08883 ribulose-phosphate 3-epimerase; Provisional

Probab=83.70  E-value=1.9  Score=30.34  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=29.8

Q ss_pred             CeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628          23 PRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL   70 (75)
Q Consensus        23 ~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l   70 (75)
                      ..+-|.+.||++-+.+..+.+   .  +.++++.|+.|.+.+++.+.+
T Consensus       166 ~~~~I~vdGGI~~eni~~l~~---a--GAd~vVvGSaIf~~~d~~~~i  208 (220)
T PRK08883        166 RDIRLEIDGGVKVDNIREIAE---A--GADMFVAGSAIFGQPDYKAVI  208 (220)
T ss_pred             CCeeEEEECCCCHHHHHHHHH---c--CCCEEEEeHHHhCCCCHHHHH
Confidence            357888999999877776643   2  567788788888655544433

>KOG0148|consensus

Probab=83.12  E-value=2.1  Score=32.19  Aligned_cols=53  Identities=17%  Similarity=0.297  Sum_probs=34.5

Q ss_pred             cccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628           3 HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL   70 (75)
Q Consensus         3 ~s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l   70 (75)
                      |+-|+ +||..|+...+..+          .||+|+-.   -++ -.++.|+.|+-.=-..++.|.+.
T Consensus       132 R~IRT-NWATRKp~e~n~~~----------ltfdeV~N---Qss-p~NtsVY~G~I~~~lte~~mr~~  184 (321)
T KOG0148|consen  132 RTIRT-NWATRKPSEMNGKP----------LTFDEVYN---QSS-PDNTSVYVGNIASGLTEDLMRQT  184 (321)
T ss_pred             ceeec-cccccCccccCCCC----------ccHHHHhc---cCC-CCCceEEeCCcCccccHHHHHHh
Confidence            67787 99999985555544          89998643   222 23789999986654445555443

>PLN02334 ribulose-phosphate 3-epimerase

Probab=82.90  E-value=1.6  Score=30.30  Aligned_cols=41  Identities=29%  Similarity=0.349  Sum_probs=28.6

Q ss_pred             EEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628          25 LIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL   70 (75)
Q Consensus        25 iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l   70 (75)
                      +-|.++||+|-+.+..+.+    . +.++++.|+.|...++..+.+
T Consensus       175 ~~I~a~GGI~~e~i~~l~~----a-Gad~vvvgsai~~~~d~~~~~  215 (229)
T PLN02334        175 LDIEVDGGVGPSTIDKAAE----A-GANVIVAGSAVFGAPDYAEVI  215 (229)
T ss_pred             CcEEEeCCCCHHHHHHHHH----c-CCCEEEEChHHhCCCCHHHHH
Confidence            4699999999987777653    2 557777777788665544333

>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI

Probab=82.85  E-value=2  Score=27.85  Aligned_cols=43  Identities=16%  Similarity=0.126  Sum_probs=28.2

Q ss_pred             eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628          24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS   71 (75)
Q Consensus        24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~   71 (75)
                      .+-|++.||++-+.+..+.+    . +.+.+..|+.+....+..+.+.
T Consensus       150 ~~pv~a~GGi~~~~i~~~~~----~-Ga~~i~~g~~i~~~~~~~~~~~  192 (196)
T cd00564         150 EIPVVAIGGITPENAAEVLA----A-GADGVAVISAITGADDPAAAAR  192 (196)
T ss_pred             CCCEEEECCCCHHHHHHHHH----c-CCCEEEEehHhhcCCCHHHHHH
Confidence            46689999999876666543    2 4566766777776555544443

TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	75
1fvf_A	591	Crystal Structure Analysis Of Neuronal Sec1 From Th		1e-22
1epu_A	591	X-Ray Crystal Structure Of Neuronal Sec1 From Squid		2e-22
3puj_A	594	Crystal Structure Of The Munc18-1 And Syntaxin4 N-P		7e-22
3c98_A	606	Revised Structure Of The Munc18a-Syntaxin1 Complex		7e-22
2pjx_A	592	Crystal Structure Of The Munc18cSYNTAXIN4 N-Peptide		2e-13
2xhe_A	650	Crystal Structure Of The Unc18-Syntaxin 1 Complex F		4e-08

>pdb|1FVF|A Chain A, Crystal Structure Analysis Of Neuronal Sec1 From The Squid L. Pealei Length = 591

Iteration: 1
 Score =  101 bits (251), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 6   RYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTPE 64
           RYGHWHKD+ Q   K+ PRLI+F++GG+S+SE+R AYEVT   K NWEVI+GS+HI+TPE
Sbjct: 520 RYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTPE 579
Query: 65  DFLNNLSNLS 74
             L +L  +S
Sbjct: 580 GLLRDLRKIS 589

>pdb|1EPU|A Chain A, X-Ray Crystal Structure Of Neuronal Sec1 From Squid Length = 591

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 6   RYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTPE 64
           RYGHWHKD+ Q   K+ PRLI+F++GG+S+SE R AYEVT   K NWEVI+GS+HI+TPE
Sbjct: 520 RYGHWHKDKGQASYKSGPRLIIFVVGGISYSEXRSAYEVTQTAKNNWEVILGSTHILTPE 579
Query: 65  DFLNNLSNLS 74
             L +L  +S
Sbjct: 580 GLLRDLRKIS 589

>pdb|3PUJ|A Chain A, Crystal Structure Of The Munc18-1 And Syntaxin4 N-Peptide Complex Length = 594

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)
Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576
Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

>pdb|3C98|A Chain A, Revised Structure Of The Munc18a-Syntaxin1 Complex Length = 606

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 55/70 (78%)
Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 529 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 588
Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 589 KLLDTLKKLN 598

>pdb|2PJX|A Chain A, Crystal Structure Of The Munc18cSYNTAXIN4 N-Peptide Complex Length = 592

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 44/55 (80%)
Query: 20  KNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74
           KN  RLI+F+IGG+++SE+RCAYEV+   K+ EVIIGS+HI+TP   L+++  L+
Sbjct: 527 KNGSRLIIFVIGGITYSEMRCAYEVSQAHKSCEVIIGSTHILTPRKLLDDIKMLN 581

>pdb|2XHE|A Chain A, Crystal Structure Of The Unc18-Syntaxin 1 Complex From Monosiga Brevicollis Length = 650

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 23  PRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL 73
           P+L VFI G VS++EIRCAYEV+ +   +EV IG+ +I TP +F+  +S L
Sbjct: 566 PKLFVFINGTVSYNEIRCAYEVSQS-SGYEVYIGAHNIATPAEFVELVSLL 615

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	75
1dn1_A	594	NSEC1, syntaxin binding protein 1; protein-protein	5e-21
3puk_A	592	Syntaxin-binding protein 3; membrane trafficking,	9e-20
1epu_A	591	S-SEC1; parallel beta-sheets, LEFT-hand turn conne	3e-19
2xhe_A	650	UNC18; exocytosis, exocytosis complex, snare, neur	1e-15
1mqs_A	671	SLY1 protein, SLY1P; SM-protein, snare, syntaxin,	1e-14

>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} SCOP: e.25.1.1 PDB: 3puj_A 3c98_A Length = 594

 Score = 83.8 bits (206), Expect = 5e-21
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 517 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 576

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 577 KLLDTLKKLN 586

>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A Length = 592

 Score = 80.3 bits (197), Expect = 9e-20
 Identities = 30/67 (44%), Positives = 46/67 (68%)

Query: 8   GHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFL 67
                +  +   KN  RLI+F+IGG+++SE+RCAYEV+   K+ EVIIGS+HI+TP   L
Sbjct: 515 QKPRTNYLELDRKNGSRLIIFVIGGITYSEMRCAYEVSQAHKSCEVIIGSTHILTPRKLL 574

Query: 68  NNLSNLS 74
           +++  L+
Sbjct: 575 DDIKMLN 581

>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A Length = 591

 Score = 78.8 bits (193), Expect = 3e-19
 Identities = 42/71 (59%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTP 63
            RYGHWHKD+ Q   K+ PRLI+F++GG+S+SE+R AYEVT   K NWEVI+GS+HI+TP
Sbjct: 519 VRYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTP 578

Query: 64  EDFLNNLSNLS 74
           E  L +L  +S
Sbjct: 579 EGLLRDLRKIS 589

>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis} Length = 650

 Score = 68.5 bits (166), Expect = 1e-15
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 20  KNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74
              P+L VFI G VS++EIRCAYEV+ +   +EV IG+ +I TP +F+  +S L 
Sbjct: 563 SAKPKLFVFINGTVSYNEIRCAYEVSQS-SGYEVYIGAHNIATPAEFVELVSLLD 616

>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1 Length = 671

 Score = 65.8 bits (159), Expect = 1e-14
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 3   HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTN--NVKNWEVIIGSSHI 60
            I R  H  K + Q    +  + +VF++GG ++ E +   E  +       +V+ GS+ I
Sbjct: 593 KITRGSHTRKPKRQ----SYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAI 648

Query: 61  MTPEDFLNNLSNLS 74
            TP +FLN +S L 
Sbjct: 649 TTPAEFLNEISRLG 662

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
1dn1_A	594	NSEC1, syntaxin binding protein 1; protein-protein	99.89
3puk_A	592	Syntaxin-binding protein 3; membrane trafficking,	99.87
3c98_A	606	Syntaxin-binding protein 1; protein complex, alter	99.84
1epu_A	591	S-SEC1; parallel beta-sheets, LEFT-hand turn conne	99.82
2xhe_A	650	UNC18; exocytosis, exocytosis complex, snare, neur	99.79
1mqs_A	671	SLY1 protein, SLY1P; SM-protein, snare, syntaxin,	99.68

>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3puj_A 3c98_A

Probab=99.89  E-value=1.2e-23  Score=162.47  Aligned_cols=72  Identities=56%  Similarity=1.086  Sum_probs=52.6

Q ss_pred             cccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628           3 HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus         3 ~s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .|+|+|+|++.+++.+.++++++||||+||+||+|+|++|++++.+++++|+||||+|+||++|+++|..|+
T Consensus       515 ~s~r~~~w~~~~~~~~~~~~~riivFivGG~Ty~E~r~~~els~~~~~~~VilG~t~il~p~~Fl~~l~~l~  586 (594)
T 1dn1_A          515 VSARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLN  586 (594)
T ss_dssp             -----------------CCCCEEEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTT
T ss_pred             cccccccccccCCccccccCCcEEEEEeCCccHHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhC
Confidence            367889999988666677889999999999999999999999998877999999999999999999999886

>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A

Probab=99.87  E-value=9.8e-23  Score=157.29  Aligned_cols=71  Identities=45%  Similarity=0.764  Sum_probs=59.0

Q ss_pred             cccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628           3 HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus         3 ~s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .|+|+|+| +++++.+..+++++||||+||+||+|+|++|++++..++++|+||||+|+||++|+++|..|+
T Consensus       511 ~s~r~~~w-~~~~~~~~~~~~riiVFivGGvTysE~r~~~els~~~~~~~vilG~T~i~np~~fl~~l~~l~  581 (592)
T 3puk_A          511 VSARQKPR-TNYLELDRKNGSRLIIFVIGGITYSEMRCAYEVSQAHKSCEVIIGSTHILTPRKLLDDIKMLN  581 (592)
T ss_dssp             -------C-CCCCCCCCSCCSEEEEEEETCEEHHHHHHHHHHHHHCCSSEEEEEESSEECHHHHHHHHSSTT
T ss_pred             cccccccc-ccCccccccCCCeEEEEEeCCcCHHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhC
Confidence            36777999 766656677889999999999999999999999998877999999999999999999999886

>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A

Probab=99.84  E-value=1.9e-21  Score=149.09  Aligned_cols=71  Identities=56%  Similarity=1.110  Sum_probs=52.5

Q ss_pred             ccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628           4 IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus         4 s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      ++++|+|++.+.++...+++++|||||||+||+|++++++++++.++++|+||||+|+||++|+++|.+|+
T Consensus       528 ~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~~~l~~ls~~~~~~~viiGsT~Iln~~~fl~~L~~L~  598 (606)
T 3c98_A          528 SARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLN  598 (606)
T ss_dssp             ----------------CCCSEEEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTT
T ss_pred             ccccCCccccCCCCCCCCCCEEEEEEECCcCHHHHHHHHHHHHHcCCcEEEEEeCCeeCHHHHHHHHHHhC
Confidence            45668999988888888899999999999999999999999988767899999999999999999999986

>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A

Probab=99.82  E-value=1.2e-20  Score=144.04  Aligned_cols=72  Identities=57%  Similarity=1.087  Sum_probs=51.0

Q ss_pred             ccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhh-cCCceEEEecccccChHHHHHHHhcCCC
Q psy8628           4 IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNN-VKNWEVIIGSSHIMTPEDFLNNLSNLSV   75 (75)
Q Consensus         4 s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~-~~~~~iiiGst~il~~~~fl~~l~~l~~   75 (75)
                      |+++|+|++.+++.....++++|||||||+||+|++++++++++ ..+++|+||||+|+||++|+++|..|+.
T Consensus       518 s~~~~~~~~~~~~~~~~~~~~viVF~vGG~Ty~E~~~l~~l~~~~~~~~~viigsT~i~n~~~fl~~l~~l~~  590 (591)
T 1epu_A          518 SVRYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTPEGLLRDLRKISN  590 (591)
T ss_dssp             ----------------CCCCEEEEEEETCBCHHHHHHHHHHHTSSCSSCEEEEEESSBCCHHHHHHHHHTTSC
T ss_pred             ccccCcccCCCCccccCCCCeEEEEEECCCCHHHHHHHHHHHhhccCCCeEEEecCCcCCHHHHHHHHHHhcC
Confidence            45668999877655556678899999999999999999999983 4578999999999999999999998863

>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}

Probab=99.79  E-value=8e-20  Score=141.61  Aligned_cols=54  Identities=48%  Similarity=0.845  Sum_probs=50.1

Q ss_pred             CCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628          20 KNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus        20 ~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .+++++|||||||+||+|++++|+++++. +++|+||||+|+||++|++++..|+
T Consensus       563 ~~~~~viVF~iGGvTysEi~al~~ls~~~-~~~viigsT~Iln~~~fl~~l~~l~  616 (650)
T 2xhe_A          563 SAKPKLFVFINGTVSYNEIRCAYEVSQSS-GYEVYIGAHNIATPAEFVELVSLLD  616 (650)
T ss_dssp             CCSCEEEEEEEEEECHHHHHHHHHHHTTS-SSEEEEEEEEECCHHHHHHHHHTTT
T ss_pred             CCCCEEEEEEECCCCHHHHHHHHHHHhcC-CCEEEEeeCCcCCHHHHHHHHHHcC
Confidence            55788999999999999999999999764 7999999999999999999999886

>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1

Probab=99.68  E-value=6.2e-17  Score=125.95  Aligned_cols=56  Identities=30%  Similarity=0.525  Sum_probs=50.2

Q ss_pred             cCCCCeEEEEEECCCCHHHHHHHHHHHhhc--CCceEEEecccccChHHHHHHHhcCC
Q psy8628          19 VKNVPRLIVFIIGGVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus        19 ~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      +.+++++|||||||+||+|++++++++++.  ++++|+||||+|+||++|+++|..|+
T Consensus       605 ~~~~~~viVFvVGG~Ty~E~~~l~~l~~~~~~~~~~viiGsT~I~n~~~Fl~~l~~l~  662 (671)
T 1mqs_A          605 RQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRLG  662 (671)
T ss_dssp             CCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESSBCCHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEEECCccHHHHHHHHHHHhhccCCCceEEEeeccccCHHHHHHHHHHhC
Confidence            345699999999999999999999999873  47899999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	75
d1dn1a_	589	e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus no	4e-24
d1epua_	590	e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshor	1e-23
d1mqsa_	653	e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccha	4e-21

>d1dn1a_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 589

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.3 bits (226), Expect = 4e-24
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64
           ARYGHWHK++A  + ++ PRLI+FI+GGVS +E+RCAYEVT     WEV+IGS+HI+TP+
Sbjct: 514 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQ 573

Query: 65  DFLNNLSNLS 74
             L+ L  L+
Sbjct: 574 KLLDTLKKLN 583

>d1epua_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]} Length = 590

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Longfin inshore squid (Loligo pealei) [TaxId: 6621]

 Score = 90.1 bits (223), Expect = 1e-23
 Identities = 42/71 (59%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVK-NWEVIIGSSHIMTP 63
            RYGHWHKD+ Q   K+ PRLI+F++GG+S+SE+R AYEVT   K NWEVI+GS+HI+TP
Sbjct: 518 VRYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTP 577

Query: 64  EDFLNNLSNLS 74
           E  L +L  +S
Sbjct: 578 EGLLRDLRKIS 588

>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 653

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Sly1P protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.8 bits (204), Expect = 4e-21
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 5   ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTN--NVKNWEVIIGSSHIMT 62
            R  H  K + Q    +  + +VF++GG ++ E +   E  +       +V+ GS+ I T
Sbjct: 581 TRGSHTRKPKRQ----SYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITT 636

Query: 63  PEDFLNNLSNLS 74
           P +FLN +S L 
Sbjct: 637 PAEFLNEISRLG 648

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d1dn1a_	589	Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [Tax	99.79
d1epua_	590	Neuronal Sec1, NSec1 {Longfin inshore squid (Lolig	99.78
d1mqsa_	653	Sly1P protein {Baker's yeast (Saccharomyces cerevi	99.73
d1w5fa2	121	Cell-division protein FtsZ {Thermotoga maritima [T	83.16
d2flia1	217	D-ribulose-5-phosphate 3-epimerase {Streptococcus	82.21

>d1dn1a_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=4.5e-20  Score=137.92  Aligned_cols=70  Identities=57%  Similarity=1.135  Sum_probs=52.1

Q ss_pred             cccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628           5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus         5 ~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .+++.|.+.+.++...+++++|||||||+||+|++++++++++.++.+|+||||+|+||++|+++|.+|+
T Consensus       514 ~~~~~~~~~~~~~~~~~~~~viVF~vGGvTy~E~~~l~~l~~~~~~~~iiiGsT~iln~~~fl~~l~~L~  583 (589)
T d1dn1a_         514 ARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLN  583 (589)
T ss_dssp             ---------------CCCCEEEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTT
T ss_pred             cccccccccCCCCcCCCCCEEEEEEECCcCHHHHHHHHHHHHHcCCceEEEEeCCEecHHHHHHHHHHhC
Confidence            3457888888878888899999999999999999999999988766799999999999999999999986

>d1epua_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Longfin inshore squid (Loligo pealei) [TaxId: 6621]

Probab=99.78  E-value=1.6e-19  Score=134.78  Aligned_cols=70  Identities=59%  Similarity=1.145  Sum_probs=51.4

Q ss_pred             cccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhc-CCceEEEecccccChHHHHHHHhcCC
Q psy8628           5 ARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNV-KNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus         5 ~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~-~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      .+.|.|.+.+......+++++|||||||+||+|++++++++++. ++++|+||||+|+||++|+++|.+|+
T Consensus       518 ~~~~~~~~~~~~~~~~~~~~viVfvvGGvTy~Ei~~l~~l~~~~~~~~~iiiGsT~i~n~~~fl~~l~~l~  588 (590)
T d1epua_         518 VRYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTPEGLLRDLRKIS  588 (590)
T ss_dssp             ---------------CCCCEEEEEEETCBCHHHHHHHHHHHTSSCSSCEEEEEESSBCCHHHHHHHHHTTS
T ss_pred             cccCcccCCCCccccCCCCEEEEEEECCcCHHHHHHHHHHHHhhCCCcEEEEEeCCeecHHHHHHHHHhhc
Confidence            34577777777666778889999999999999999999999864 47899999999999999999999986

>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Sly1P protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=2.3e-18  Score=129.72  Aligned_cols=56  Identities=30%  Similarity=0.525  Sum_probs=50.6

Q ss_pred             cCCCCeEEEEEECCCCHHHHHHHHHHHhhc--CCceEEEecccccChHHHHHHHhcCC
Q psy8628          19 VKNVPRLIVFIIGGVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTPEDFLNNLSNLS   74 (75)
Q Consensus        19 ~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~~~fl~~l~~l~   74 (75)
                      ..+++++|||||||+||+|++++++++++.  ++++|+||||+|+||++|+++|.+|+
T Consensus       591 ~~~~~~viVF~vGGvTy~Ei~~l~~l~~~~~~~~~~iiiGsT~iin~~~fl~~l~~L~  648 (653)
T d1mqsa_         591 RQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRLG  648 (653)
T ss_dssp             CCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESSBCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEEECCcCHHHHHHHHHHHHhccCCCcEEEEeeCCeecHHHHHHHHHHhC
Confidence            446688999999999999999999999865  46899999999999999999999875

>d1w5fa2 d.79.2.1 (A:216-336) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: Tubulin C-terminal domain-like
family: Tubulin, C-terminal domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=83.16  E-value=1.5  Score=25.86  Aligned_cols=37  Identities=14%  Similarity=0.196  Sum_probs=29.3

Q ss_pred             CCeEEEEEECC--CCHHHHHHHHHHHhhc--CCceEEEecc
Q psy8628          22 VPRLIVFIIGG--VSFSEIRCAYEVTNNV--KNWEVIIGSS   58 (75)
Q Consensus        22 ~~~iiVFvvGG--iTy~E~~~i~~l~~~~--~~~~iiiGst   58 (75)
                      -+.++|.|.||  +|++|+..+.+.-++.  ++.+|+.|.+
T Consensus        54 A~gvLv~i~~g~d~sl~ei~~~~~~i~~~~~~da~ii~G~~   94 (121)
T d1w5fa2          54 ASSIVFNITAPSNIRMEEVHEAAMIIRQNSSEDADVKFGLI   94 (121)
T ss_dssp             CSEEEEEEEECTTCCHHHHHHHHHHHHTTSCTTSEEEEEEE
T ss_pred             cceEEEEEEeCCCCCHHHHHHHHHHHHHhcCCCCeEEEeeE
Confidence            47899999997  9999999987766553  4678888864

>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.21  E-value=0.38  Score=31.00  Aligned_cols=49  Identities=22%  Similarity=0.381  Sum_probs=35.5

Q ss_pred             CCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcC
Q psy8628          20 KNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL   73 (75)
Q Consensus        20 ~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l   73 (75)
                      .....+.|.+=||++.+-+..+.+.     +.++++.|+.|.+..+..+.+.+|
T Consensus       164 ~~~~~~~I~vDGGIn~~~i~~l~~a-----Gad~~V~Gsaif~~~d~~~~i~~l  212 (217)
T d2flia1         164 EKGLSFDIEVDGGVDNKTIRACYEA-----GANVFVAGSYLFKASDLVSQVQTL  212 (217)
T ss_dssp             HTTCCCEEEEESSCCTTTHHHHHHH-----TCCEEEESHHHHTSSCHHHHHHHH
T ss_pred             hcCCCeEEEEeCCCCHHHHHHHHHC-----CCCEEEEchHHhCCCCHHHHHHHH
Confidence            3456788999999999877776543     567777777888877766665543