Psyllid ID: psy8807

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MDTHTDTNHMQSCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLKISKE
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHcHHHHHHHHHcHHHHHcccHHHHccEcHHHccccEcHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHccHHHHEcccccccccccccEEEccccc
Coil and Loop (DISEMBL)
mdthtdtnhmqsCLTSVIHWELVYSTCYRRAALLADDMVITDFLfrngkpfgrdlraidvqrgrdhglasyndyrafcglpraykfedfldvispdllLEDQLAEIKKASLARLLcdnsdeihtmqpAAFLKISKE
Flexible Loop (DISEMBL)
mdthtdtnhmqsCLTSVIHWELVYSTCYRRAALLADDMVITDFLfrngkpfgrdlrAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLcdnsdeihtmqpaaflkiske
Low Complexity Region (SEG)
MDTHTDTNHMQSCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLKISKE
Disordered region (IsUnstruct)
***********SCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIH*************
Disordered Region (DISOPRED)
**THTDTNHMQSCLTSVIHWELVYSTC**********MVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLKI***
Disordered Region (DISEMBL)
**********QSCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLKISKE
Disordered Region (DISPRO)
*****DTNHMQSCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLK****
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTHTDTNHMQSCLTSVIHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAEIKKASLARLLCDNSDEIHTMQPAAFLKISKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
Q01603	690	Peroxidase OS=Drosophila	yes	N/A	0.455	0.089	0.612	2e-16
Q3UQ28	1475	Peroxidasin homolog OS=Mu	yes	N/A	0.669	0.061	0.304	2e-11
Q9VEG6	809	Chorion peroxidase OS=Dro	no	N/A	0.676	0.113	0.326	2e-11
Q92626	1479	Peroxidasin homolog OS=Ho	yes	N/A	0.669	0.061	0.298	9e-11
Q7QH73	767	Chorion peroxidase OS=Ano	no	N/A	0.389	0.069	0.509	3e-09
A4IGL7	1457	Peroxidasin OS=Xenopus tr	yes	N/A	0.639	0.059	0.285	4e-09
Q1ENI8	1285	Peroxidasin homolog OS=Ca	no	N/A	0.470	0.049	0.390	1e-08
A8WQH2	1288	Peroxidasin homolog OS=Ca	N/A	N/A	0.470	0.049	0.390	1e-08
Q23490	724	Peroxidase mlt-7 OS=Caeno	no	N/A	0.330	0.062	0.565	4e-08
A1KZ92	1463	Peroxidasin-like protein	no	N/A	0.683	0.063	0.274	4e-08

>sp|Q01603|PERO_DROME Peroxidase OS=Drosophila melanogaster GN=Pxd PE=2 SV=2

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 46/62 (74%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
           D  I  FLFR   PFG DLR++D+QR RDHGLASYND R FCGL RA+ +E + D+ISP 
Sbjct: 495 DRQIKHFLFRRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPP 554

Query: 97  LL 98
           +L
Sbjct: 555 IL 556

Involved in the chorion hardening process, through protein cross-linking mediated by the formation of di- and tri-tyrosine bonds.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7

>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 61/151 (40%), Gaps = 60/151 (39%)

Query: 40   ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS----- 94
            +T+ LF        DL AI++QRGRDHG+  Y+DYR +C L  AY FED  + I      
Sbjct: 1136 LTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIKSPVIR 1195

Query: 95   ----------------PDLLLED------------------------------------- 101
                            P L++ED                                     
Sbjct: 1196 EKLQRLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWYENPGVFS 1255

Query: 102  --QLAEIKKASLARLLCDNSDEIHTMQPAAF 130
              QL ++K+ SLAR+LCDNSD I  +Q   F
Sbjct: 1256 PAQLTQLKQTSLARILCDNSDNITRVQQDVF 1286

Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9VEG6|PERC_DROME Chorion peroxidase OS=Drosophila melanogaster GN=Pxt PE=2 SV=3

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 66/156 (42%), Gaps = 64/156 (41%)

Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDL-- 97
           ++ FLFR   PFG DL AI++QRGRD GL SYNDY    G P+ + FE F   I+  L  
Sbjct: 629 LSRFLFRGDNPFGLDLAAINIQRGRDQGLRSYNDYLELMGAPKLHSFEQFPIEIAQKLSR 688

Query: 98  -------------------------------LLEDQLA---------------------- 104
                                          ++ DQ A                      
Sbjct: 689 VYRTPDDIDLWVGGLLEKAVEGGVVGVTFAEIIADQFARFKQGDRYYYEYDNGINPGAFN 748

Query: 105 -----EIKKASLARLLCDNSDEIHTMQP---AAFLK 132
                EI+K +LARLLCDNSD + T+Q    AAF++
Sbjct: 749 PLQLQEIRKVTLARLLCDNSDRL-TLQAVPLAAFVR 783

Required for ovarian follicle maturation. Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 61/151 (40%), Gaps = 60/151 (39%)

Query: 40   ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS----- 94
            +T+ LF        DL AI++QRGRDHG+  Y+DYR +C L  A+ FED  + I      
Sbjct: 1139 LTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAHTFEDLKNEIKNPEIR 1198

Query: 95   ----------------PDLLLED------------------------------------- 101
                            P L++ED                                     
Sbjct: 1199 EKLKRLYGSTLNIDLFPALVVEDLVPGSRLGPTLMCLLSTQFKRLRDGDRLWYENPGVFS 1258

Query: 102  --QLAEIKKASLARLLCDNSDEIHTMQPAAF 130
              QL +IK+ SLAR+LCDN+D I  +Q   F
Sbjct: 1259 PAQLTQIKQTSLARILCDNADNITRVQSDVF 1289

Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system. Plays a role in extracellular matrix formation.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q7QH73|PERC_ANOGA Chorion peroxidase OS=Anopheles gambiae GN=pxt PE=2 SV=3

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%)

Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV 92
           +T  LF    PFG DL ++++QRGRDH L  YNDYR++ GL R   FE F  V
Sbjct: 589 LTRLLFAGRNPFGSDLASLNIQRGRDHALRPYNDYRSWAGLERLTSFEQFGPV 641

Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 57/147 (38%), Gaps = 60/147 (40%)

Query: 40   ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS----- 94
            +T+ LF        DL A++VQRGRDHG+  Y+D+R FC L     F+D  + I      
Sbjct: 1128 LTEKLFSMAHAVALDLAALNVQRGRDHGIPPYHDFRVFCNLSTVQTFDDLRNEIKNPDVR 1187

Query: 95   ----------------PDLLLED------------------------------------- 101
                            P L++ED                                     
Sbjct: 1188 EKLKRLYGSPLNIDLFPALMVEDLIPGSRLGPTLMCLLTTQFRNIRDGDRFWYENPGVFT 1247

Query: 102  --QLAEIKKASLARLLCDNSDEIHTMQ 126
              QL +IK+ SLAR+LCDN D I  +Q
Sbjct: 1248 AAQLTQIKQTSLARVLCDNGDNITKVQ 1274

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q1ENI8|PXDN_CAEEL Peroxidasin homolog OS=Caenorhabditis elegans GN=pxn-1 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 37   DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
            +M + + LF  G     DL  +++QR RDHGL SY +YR FC LP   ++ED    I  D
Sbjct: 1035 NMELIEKLFMKGHEVSLDLAVMNIQRSRDHGLPSYTEYRKFCNLPVPVQWEDMKGYIKDD 1094

Query: 97   LLLE 100
            ++++
Sbjct: 1095 MIIQ 1098

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|A8WQH2|PXDN_CAEBR Peroxidasin homolog OS=Caenorhabditis briggsae GN=pxn-1 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 37   DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
            +M + + LF  G     DL  +++QR RDHGL SY +YR FC LP   ++ED    I  D
Sbjct: 1034 NMELIEKLFMKGHEVSLDLAVMNIQRSRDHGLPSYTEYRQFCNLPVPARWEDMKGYIKDD 1093

Query: 97   LLLE 100
            ++++
Sbjct: 1094 MIIQ 1097

Caenorhabditis briggsae (taxid: 6238)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q23490|MLT7_CAEEL Peroxidase mlt-7 OS=Caenorhabditis elegans GN=mlt-7 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)

Query: 49  KPFGR-DLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVI 93
           K FG  DL ++++QRGRDHG+ SYN  R FCGL  A  F+DF D+I
Sbjct: 558 KMFGSTDLGSLNIQRGRDHGIPSYNKMRQFCGLKSANTFDDFADMI 603

Plays an essential role in cuticle biogenesis. Required in combination with bli-3 for correct formation of cross-links in cuticle collagens.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 60/153 (39%)

Query: 40   ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS----- 94
            +T  LF        D  A  +QRGRDHG+  Y D+R FC L     FED  + I      
Sbjct: 1122 LTQRLFSAAYSAAVDSAATIIQRGRDHGIPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIR 1181

Query: 95   ----------------PDLLLED------------------------------------- 101
                            P L++ED                                     
Sbjct: 1182 QKLRKLYGSPGDIDLWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFT 1241

Query: 102  --QLAEIKKASLARLLCDNSDEIHTMQPAAFLK 132
              QL ++K+ASL+R+LCDN D I  +Q   F+K
Sbjct: 1242 PAQLTQLKQASLSRVLCDNGDSIQQVQADVFVK 1274

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
328707938	694	PREDICTED: peroxidase-like [Acyrthosipho	0.397	0.077	0.888	2e-21
124487746	194	putative peroxidase [Maconellicoccus hir	0.404	0.283	0.8	8e-19
91078176	673	PREDICTED: similar to AGAP010734-PA [Tri	0.441	0.089	0.716	1e-18
328776817	703	PREDICTED: peroxidase [Apis mellifera]	0.426	0.082	0.724	5e-18
157112369	719	oxidase/peroxidase [Aedes aegypti] gi|10	0.433	0.082	0.677	2e-17
157112010	683	oxidase/peroxidase [Aedes aegypti] gi|10	0.433	0.086	0.677	2e-17
4039144	683	peroxidase [Aedes aegypti]	0.433	0.086	0.677	2e-17
328794501	146	PREDICTED: peroxidase-like, partial [Api	0.426	0.397	0.724	2e-17
350407373	702	PREDICTED: peroxidase-like isoform 1 [Bo	0.433	0.084	0.694	9e-17
158289807	687	AGAP010734-PA [Anopheles gambiae str. PE	0.433	0.085	0.677	9e-17

>gi|328707938|ref|XP_001949485.2| PREDICTED: peroxidase-like [Acyrthosiphon pisum]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/54 (88%), Positives = 50/54 (92%)

Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVI 93
           ITDFLFR G+PFGRDLRAIDVQRGRDHGLASYNDYR FCGLPRA+KFEDF D I
Sbjct: 495 ITDFLFRAGRPFGRDLRAIDVQRGRDHGLASYNDYREFCGLPRAHKFEDFSDYI 548

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|124487746|gb|ABN11960.1| putative peroxidase [Maconellicoccus hirsutus]

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 42 DFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
          DFLFR  +PFGRDLRAID+QRGRDHGL SYNDYR FCGL RA+KFEDFLD I P+
Sbjct: 1  DFLFRRDRPFGRDLRAIDIQRGRDHGLGSYNDYREFCGLNRAHKFEDFLDFIDPE 55

Source: Maconellicoccus hirsutus

Species: Maconellicoccus hirsutus

Genus: Maconellicoccus

Family: Pseudococcidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078176|ref|XP_967241.1| PREDICTED: similar to AGAP010734-PA [Tribolium castaneum] gi|270002725|gb|EEZ99172.1| hypothetical protein TcasGA2_TC000175 [Tribolium castaneum]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 51/60 (85%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
           D  IT FLFR+G+ FG DL+AID+QR RDHGLASYN+YR FCGLPRA+ FEDFLDV++ D
Sbjct: 471 DSEITQFLFRDGQQFGSDLKAIDIQRNRDHGLASYNEYRGFCGLPRAHSFEDFLDVMTQD 530

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776817|ref|XP_623940.3| PREDICTED: peroxidase [Apis mellifera]

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 47/58 (81%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS 94
           D  IT FLFRNG+P G DLRAID+QR RDHGLASYN+YR +CGLPRA  F+DF D IS
Sbjct: 506 DPEITHFLFRNGRPLGTDLRAIDIQRNRDHGLASYNNYREYCGLPRAESFQDFTDYIS 563

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157112369|ref|XP_001657503.1| oxidase/peroxidase [Aedes aegypti] gi|108868308|gb|EAT32533.1| AAEL015354-PA [Aedes aegypti]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 46/59 (77%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           D  I  FLFR G+PFG DLRA D+QR RDHGLA YNDYR FCG  RA+ +EDF+D+ISP
Sbjct: 521 DAEIKHFLFRRGRPFGSDLRAFDIQRNRDHGLAGYNDYREFCGFKRAHSWEDFMDLISP 579

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157112010|ref|XP_001657372.1| oxidase/peroxidase [Aedes aegypti] gi|108878203|gb|EAT42428.1| AAEL006014-PA [Aedes aegypti]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 46/59 (77%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           D  I  FLFR G+PFG DLRA D+QR RDHGLA YNDYR FCG  RA+ +EDF+D+ISP
Sbjct: 485 DAEIKHFLFRRGRPFGSDLRAFDIQRNRDHGLAGYNDYREFCGFKRAHSWEDFMDLISP 543

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|4039144|gb|AAC97504.1| peroxidase [Aedes aegypti]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 46/59 (77%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           D  I  FLFR G+PFG DLRA D+QR RDHGLA YNDYR FCG  RA+ +EDF+D+ISP
Sbjct: 485 DAEIKHFLFRRGRPFGSDLRAFDIQRNRDHGLAGYNDYREFCGFKRAHSWEDFMDLISP 543

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328794501|ref|XP_003252080.1| PREDICTED: peroxidase-like, partial [Apis mellifera]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 47/58 (81%)

Query: 37 DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVIS 94
          D  IT FLFRNG+P G DLRAID+QR RDHGLASYN+YR +CGLPRA  F+DF D IS
Sbjct: 21 DPEITHFLFRNGRPLGTDLRAIDIQRNRDHGLASYNNYREYCGLPRAESFQDFTDYIS 78

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407373|ref|XP_003488069.1| PREDICTED: peroxidase-like isoform 1 [Bombus impatiens] gi|350407376|ref|XP_003488070.1| PREDICTED: peroxidase-like isoform 2 [Bombus impatiens]

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 45/59 (76%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           D  IT+FLFRN +P G DLRA D+QR RDHGLASYN YR +CGLPRA  F DF D ISP
Sbjct: 507 DAEITEFLFRNDRPLGSDLRATDIQRDRDHGLASYNSYREYCGLPRAKYFTDFTDYISP 565

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158289807|ref|XP_311448.4| AGAP010734-PA [Anopheles gambiae str. PEST] gi|157018505|gb|EAA07042.4| AGAP010734-PA [Anopheles gambiae str. PEST]

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 45/59 (76%)

Query: 37  DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           D  I  FLFR G+PFG DLRAID+QR RDHGLA YNDYR FCG  RA  +ED +D+ISP
Sbjct: 489 DAEIKHFLFRRGRPFGGDLRAIDIQRNRDHGLAGYNDYREFCGFKRASTWEDLMDLISP 547

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
FB|FBgn0004577	690	Pxd "Peroxidase" [Drosophila m	0.455	0.089	0.612	1.7e-24
FB|FBgn0261987	809	Pxt "Peroxinectin-like" [Droso	0.367	0.061	0.56	1.5e-16
WB|WBGene00016700	1537	C46A5.4 [Caenorhabditis elegan	0.727	0.064	0.354	1.9e-15
WB|WBGene00022743	724	mlt-7 [Caenorhabditis elegans	0.330	0.062	0.565	5.5e-15
UNIPROTKB|F1M335	1317	F1M335 "Uncharacterized protei	0.448	0.046	0.442	1.8e-14
MGI|MGI:1916925	1475	Pxdn "peroxidasin homolog (Dro	0.448	0.041	0.442	1.8e-14
FB|FBgn0038469	623	CG4009 [Drosophila melanogaste	0.286	0.062	0.641	1.9e-14
WB|WBGene00004256	1285	pxn-1 [Caenorhabditis elegans	0.470	0.049	0.390	4.5e-14
UNIPROTKB|Q92626	1479	PXDN "Peroxidasin homolog" [Ho	0.426	0.039	0.440	1e-13
UNIPROTKB|F1NN41	1416	PXDN "Uncharacterized protein"	0.426	0.040	0.406	6.2e-13

FB|FBgn0004577 Pxd "Peroxidase" [Drosophila melanogaster (taxid:7227)]

 Score = 204 (76.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
 Identities = 38/62 (61%), Positives = 46/62 (74%)

Query:    37 DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
             D  I  FLFR   PFG DLR++D+QR RDHGLASYND R FCGL RA+ +E + D+ISP 
Sbjct:   495 DRQIKHFLFRRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPP 554

Query:    97 LL 98
             +L
Sbjct:   555 IL 556

GO:0004601 "peroxidase activity" evidence=ISS;NAS

GO:0005506 "iron ion binding" evidence=NAS

GO:0005576 "extracellular region" evidence=NAS

GO:0020037 "heme binding" evidence=IEA;NAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0007306 "eggshell chorion assembly" evidence=NAS

GO:0042600 "chorion" evidence=IDA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0261987 Pxt "Peroxinectin-like" [Drosophila melanogaster (taxid:7227)]

 Score = 153 (58.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query:    40 ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDF 89
             ++ FLFR   PFG DL AI++QRGRD GL SYNDY    G P+ + FE F
Sbjct:   629 LSRFLFRGDNPFGLDLAAINIQRGRDQGLRSYNDYLELMGAPKLHSFEQF 678

GO:0004601 "peroxidase activity" evidence=ISS;NAS

GO:0020037 "heme binding" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004666 "prostaglandin-endoperoxide synthase activity" evidence=ISM

GO:0001516 "prostaglandin biosynthetic process" evidence=IMP

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007304 "chorion-containing eggshell formation" evidence=IMP

WB|WBGene00016700 C46A5.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 142 (55.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
 Identities = 39/110 (35%), Positives = 58/110 (52%)

Query:     6 DTNHMQSCLTSVIHWELVYSTCYRRAALLADDMVITDFLF-RNGKPF-GRDLRAIDVQRG 63
             ++ HM+S L  +I      S  + R  + A    + + LF + G P  G DL A+++QRG
Sbjct:  1259 NSGHMESILMGLIG---ANSMAFDRHIVTA----VRNHLFAKPGGPLTGLDLPAVNIQRG 1311

Query:    64 RDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLL--LEDQLAEIKKASL 111
             RDHG+  YN YR  CGL +A  F D  DV++ + +  LE   A +    L
Sbjct:  1312 RDHGVQGYNAYRKHCGLRKASAFSDLRDVMNSEAVTALETAYAHVDDIDL 1361

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

WB|WBGene00022743 mlt-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 135 (52.6 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query:    49 KPFGR-DLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVI 93
             K FG  DL ++++QRGRDHG+ SYN  R FCGL  A  F+DF D+I
Sbjct:   558 KMFGSTDLGSLNIQRGRDHGIPSYNKMRQFCGLKSANTFDDFADMI 603

GO:0004601 "peroxidase activity" evidence=IEA;IDA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004623 "phospholipase A2 activity" evidence=IEA

GO:0006644 "phospholipid metabolic process" evidence=IEA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0002119 "nematode larval development" evidence=IGI;IMP

GO:0040007 "growth" evidence=IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040032 "post-embryonic body morphogenesis" evidence=IGI;IMP

GO:0042338 "cuticle development involved in collagen and cuticulin-based cuticle molting cycle" evidence=IGI;IMP

GO:0018149 "peptide cross-linking" evidence=IMP

UNIPROTKB|F1M335 F1M335 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 142 (55.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query:    40 ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLL 99
             +T+ LF        DL AI++QRGRDHG+  Y+DYR +C L  AY FED  + I   ++ 
Sbjct:   978 LTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIKSPVIR 1037

Query:   100 E 100
             E
Sbjct:  1038 E 1038

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

MGI|MGI:1916925 Pxdn "peroxidasin homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 142 (55.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query:    40 ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLL 99
             +T+ LF        DL AI++QRGRDHG+  Y+DYR +C L  AY FED  + I   ++ 
Sbjct:  1136 LTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIKSPVIR 1195

Query:   100 E 100
             E
Sbjct:  1196 E 1196

GO:0004601 "peroxidase activity" evidence=ISO

GO:0005201 "extracellular matrix structural constituent" evidence=ISO

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0020037 "heme binding" evidence=ISO

GO:0030198 "extracellular matrix organization" evidence=ISO;IDA

GO:0031012 "extracellular matrix" evidence=ISO;IDA

GO:0042744 "hydrogen peroxide catabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

FB|FBgn0038469 CG4009 [Drosophila melanogaster (taxid:7227)]

 Score = 136 (52.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 25/39 (64%), Positives = 30/39 (76%)

Query:    51 FGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDF 89
             +G DL++ID+QR RD GLASYND R FCGL RA  + DF
Sbjct:   477 YGSDLKSIDIQRARDFGLASYNDVREFCGLRRAVDWADF 515

GO:0004601 "peroxidase activity" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0042600 "chorion" evidence=IDA

WB|WBGene00004256 pxn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 137 (53.3 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query:    37 DMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
             +M + + LF  G     DL  +++QR RDHGL SY +YR FC LP   ++ED    I  D
Sbjct:  1035 NMELIEKLFMKGHEVSLDLAVMNIQRSRDHGLPSYTEYRKFCNLPVPVQWEDMKGYIKDD 1094

Query:    97 LLLE 100
             ++++
Sbjct:  1095 MIIQ 1098

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q92626 PXDN "Peroxidasin homolog" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query:    40 ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVI-SPDL 97
             +T+ LF        DL AI++QRGRDHG+  Y+DYR +C L  A+ FED  + I +P++
Sbjct:  1139 LTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAHTFEDLKNEIKNPEI 1197

GO:0046872 "metal ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005152 "interleukin-1 receptor antagonist activity" evidence=NAS

GO:0006955 "immune response" evidence=NAS

GO:0004601 "peroxidase activity" evidence=IDA

GO:0005201 "extracellular matrix structural constituent" evidence=IDA

GO:0031012 "extracellular matrix" evidence=IDA

GO:0030198 "extracellular matrix organization" evidence=IDA

GO:0042744 "hydrogen peroxide catabolic process" evidence=IDA

GO:0020037 "heme binding" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0001960 "negative regulation of cytokine-mediated signaling pathway" evidence=NAS

UNIPROTKB|F1NN41 PXDN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 129 (50.5 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query:    40 ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVI-SPDL 97
             +T+ LF   +    DL A+++QRGRDHG+  Y+D+R +C L  A  FED  + I +P++
Sbjct:  1075 LTERLFSMARTVALDLAAMNIQRGRDHGIPPYHDFRVYCNLSSAQTFEDLKNEIKNPEI 1133

GO:0004601 "peroxidase activity" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IEA

GO:0031012 "extracellular matrix" evidence=IEA

GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q01603	PERO_DROME	1, ., 1, 1, ., 1, ., 7	0.6129	0.4558	0.0898	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
cd09823	378	cd09823, peroxinectin_like, peroxinectin_like anim	1e-26
pfam03098	521	pfam03098, An_peroxidase, Animal haem peroxidase	8e-26
cd09826	440	cd09826, peroxidasin_like, Animal heme peroxidase	1e-21
cd09825	565	cd09825, thyroid_peroxidase, Thyroid peroxidase (T	5e-14
cd09822	420	cd09822, peroxinectin_like_bacterial, Uncharacteri	4e-12
cd05396	370	cd05396, An_peroxidase_like, Animal heme peroxidas	1e-11
cd09824	411	cd09824, myeloperoxidase_like, Myeloperoxidases, e	1e-10
cd09820	558	cd09820, dual_peroxidase_like, Dual oxidase and re	6e-08
cd09818	484	cd09818, PIOX_like, Animal heme oxidases similar t	9e-06
cd09823	378	cd09823, peroxinectin_like, peroxinectin_like anim	2e-05
cd09816	490	cd09816, prostaglandin_endoperoxide_synthase, Anim	9e-04
cd09817	550	cd09817, linoleate_diol_synthase_like, Linoleate (	0.002

>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases

 Score =  101 bits (255), Expect = 1e-26
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 36  DDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
            D + T F FR G PFG DL A+++QRGRDHGL  YNDYR FCGLPRA  F+D L ++SP
Sbjct: 234 TDELTTHFFFRGGNPFGLDLAALNIQRGRDHGLPGYNDYREFCGLPRATTFDDLLGIMSP 293

Query: 96  DLLLEDQLAEI 106
           + +   +L  +
Sbjct: 294 ETI--QKLRRL 302

Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378

>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase

 Score =  100 bits (252), Expect = 8e-26
 Identities = 53/165 (32%), Positives = 67/165 (40%), Gaps = 65/165 (39%)

Query: 31  AALLADDMV---ITDFLF--RNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYK 85
            A L D+ +   + + LF  RN    G DL A+++QRGRDHGL  YN+YR FCGL  A  
Sbjct: 357 PAELLDNSLSDELRNRLFGPRNFPGSGLDLAALNIQRGRDHGLPPYNEYRRFCGLKPATS 416

Query: 86  FEDFLDVI--------------SPD-------LLLED----------------------- 101
           FED  D I               PD        L E                        
Sbjct: 417 FEDLTDEIGDEELAEKLKELYGDPDDIDLWVGGLAEKPVPGGLVGPTFACIIAEQFLRLR 476

Query: 102 ----------------QLAEIKKASLARLLCDNSDEIHTMQPAAF 130
                           QL EI+K +LAR++CDN+  I  +QP AF
Sbjct: 477 DGDRFWYENPGVFTGEQLEEIRKTTLARVICDNTPGITRVQPNAF 521

Length = 521

>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins

 Score = 88.5 bits (220), Expect = 1e-21
 Identities = 49/152 (32%), Positives = 59/152 (38%), Gaps = 60/152 (39%)

Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD--- 96
           +T+ LF        DL A+++QRGRDHGL  YNDYR FC L  A  FED  + I  D   
Sbjct: 276 LTEKLFEMAHEVALDLAALNIQRGRDHGLPGYNDYRKFCNLSVAETFEDLKNEIKNDDVR 335

Query: 97  ------------------LLLED------------------------------------- 101
                              +LED                                     
Sbjct: 336 EKLKRLYGHPGNIDLFVGGILEDLLPGARVGPTLACLLAEQFRRLRDGDRFWYENPGVFS 395

Query: 102 --QLAEIKKASLARLLCDNSDEIHTMQPAAFL 131
             QL +IKK SLAR+LCDN D I  +Q   FL
Sbjct: 396 PAQLTQIKKTSLARVLCDNGDNITRVQEDVFL 427

Peroxidasin is a secreted heme peroxidase which is involved in hydrogen peroxide metabolism and peroxidative reactions in the cardiovascular system. The domain co-occurs with extracellular matrix domains and may play a role in the formation of the extracellular matrix. Length = 440

>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO)

 Score = 67.1 bits (164), Expect = 5e-14
 Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 64/160 (40%)

Query: 35  ADDMV---ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLD 91
            DD++   +T+ LF        DL ++++QRGRDHGL  YND+R FCGLPR     D   
Sbjct: 383 PDDLMNEELTEKLFVLSNSSTLDLASLNLQRGRDHGLPGYNDWREFCGLPRLATPADLAT 442

Query: 92  VIS-----------------PDL----LLED----------------------------- 101
            I+                  D+    L ED                             
Sbjct: 443 AIADQAVADKILDLYKHPDNIDVWLGGLAEDFLPGARTGPLFACLIGKQMKALRDGDRFW 502

Query: 102 ----------QLAEIKKASLARLLCDNSDEIHTMQPAAFL 131
                     Q  E++K SL+R++CDN+  +  + P AF 
Sbjct: 503 WENSNVFTDAQRRELRKHSLSRVICDNTG-LTRVPPDAFQ 541

TPO is a member of the animal heme peroxidase family, which is expressed in the thyroid and involved in the processing of iodine and iodine compounds. Specifically, TPO oxidizes iodide via hydrogen peroxide to form active iodine, which is then, for example, incorporated into the tyrosine residues of thyroglobulin to yield mono- and di-iodotyrosines. Length = 565

>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 36  DDMVITD---FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV 92
           D  ++ D   FLF      G DL A+++QRGRDHGL SYN  R   GLP    F D    
Sbjct: 266 DTFIVDDVRNFLFGPPGAGGFDLAALNIQRGRDHGLPSYNQLREALGLPAVTSFSD---- 321

Query: 93  ISPDLLLEDQLAEI 106
           I+ D  L  +LA +
Sbjct: 322 ITSDPDLAARLASV 335

Animal heme peroxidases are diverse family of enzymes which are not restricted to animals. Members are also found in metazoans, fungi, and plants, and also in bacteria - like most members of this family of uncharacterized proteins. Length = 420

>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 27/70 (38%), Positives = 38/70 (54%)

Query: 22  LVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLP 81
           L+     + A L+  ++    FLF   +  G DL A+++QRGRD GL SYN+ R F GL 
Sbjct: 216 LLRGFLRQPAGLIDQNVDDVMFLFGPLEGVGLDLAALNIQRGRDLGLPSYNEVRRFIGLK 275

Query: 82  RAYKFEDFLD 91
               F+D L 
Sbjct: 276 PPTSFQDILT 285

A diverse family of enzymes, which includes prostaglandin G/H synthase, thyroid peroxidase, myeloperoxidase, linoleate diol synthase, lactoperoxidase, peroxinectin, peroxidasin, and others. Despite its name, this family is not restricted to metazoans: members are found in fungi, plants, and bacteria as well. Length = 370

>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 29  RRAALLA-DDMV---ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLP 81
             A L   + M+   + + LF+  K  G DL A+++QRGRDHGL  YN +R FCGL 
Sbjct: 237 TPAKLNNQNQMLVDELRERLFQQTKRMGLDLAALNLQRGRDHGLPGYNAWRRFCGLS 293

This well conserved family of animal heme peroxidases contains members with somewhat diverse functions. Myeloperoxidases are lysosomal proteins found in azurophilic granules of neutrophils and the lysosomes of monocytes. They are involved in the formation of microbicidal agents upon activation of activated neutrophils (neutrophils undergoing respiratory bursts as a result of phagocytosis), by catalyzing the conversion of hydrogen peroxide to hypochlorous acid. As a heme protein, myeloperoxidase is responsible for the greenish tint of pus, which is rich in neutrophils. Eosinophil peroxidases are haloperoxidases as well, preferring bromide over chloride. Expressed by eosinophil granulocytes, they are involved in attacking multicellular parasites and play roles in various inflammatory diseases such as asthma. The haloperoxidase lactoperoxidase is secreted from mucosal glands and provides antibacterial activity by oxidizing a variety of substrates such as bromide or chloride in the presence of hydrogen peroxide. Length = 411

>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 36  DDMVIT----DFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDF 89
           +D +I     D+LF   +   RDL A+++QRGRDHGL  YN  R   GLP    + D 
Sbjct: 362 EDNIIVEDLRDYLFGPLEFSRRDLMALNIQRGRDHGLPDYNTAREAFGLPPRTTWSDI 419

Animal heme peroxidases of the dual-oxidase like subfamily play vital roles in the innate mucosal immunity of gut epithelia. They provide reactive oxygen species which help control infection. Length = 558

>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 54  DLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFED 88
           DL AID+ R R+ G+  YN++R    LP A  FED
Sbjct: 341 DLAAIDILRDRERGVPRYNEFRRLLHLPPAKSFED 375

This is a diverse family of oxygenases related to the animal heme peroxidases, with members from plants, animals, and bacteria. The plant pathogen-inducible oxygenases (PIOX) oxygenate fatty acids into 2R-hydroperoxides. They may be involved in the hypersensitive reaction, rapid and localized cell death induced by infection with pathogens, and the rapidly induced expression of PIOX may be caused by the oxidative burst that occurs in the process of cell death. Length = 484

>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 100 EDQLAEIKKASLARLLCDN 118
             QL EI+K SLAR++CDN
Sbjct: 360 PAQLNEIRKVSLARIICDN 378

Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378

>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)

Query: 54  DLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPDLLLEDQLAE 105
           ++R+I+   GR   LAS+NDYR   GLP    FE+    ++ D  +  +L E
Sbjct: 361 EVRSIEQ--GRKLRLASFNDYRKRFGLPPYTSFEE----LTGDPEVAAELEE 406

Animal prostaglandin endoperoxide synthases, including prostaglandin H2 synthase and a set of similar bacterial proteins which may function as cyclooxygenases. Prostaglandin H2 synthase catalyzes the synthesis of prostaglandin H2 from arachidonic acid. In two reaction steps, arachidonic acid is converted to Prostaglandin G2, a peroxide (cyclooxygenase activity) and subsequently converted to the end product via the enzyme's peroxidase activity. Prostaglandin H2 synthase is the target of aspirin and other non-steroid anti-inflammatory drugs such as ibuprofen, which block the substrate's access to the active site and may acetylate a conserved serine residue. In humans and other mammals, prostaglandin H2 synthase (PGHS), also called cyclooxygenase (COX) is present as at least two isozymes, PGHS-1 (or COX-1) and PGHS-2 (or COX-2), respectively. PGHS-1 is expressed constitutively in most mammalian cells, while the expression of PGHS-2 is induced via inflammation response in endothelial cells, activated macrophages, and others. COX-3 is a splice variant of COX-1. Length = 490

>gnl|CDD|188649 cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase and related enzymes

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 55  LRAIDV---QRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISPD 96
           L+ I++    + R+  +A+ N++R F GL     FED    I+ D
Sbjct: 372 LKVIEILGILQAREWNVATLNEFRKFFGLKPYETFED----INSD 412

These fungal enzymes, related to animal heme peroxidases, catalyze the oxygenation of linoleate and similar targets. Linoleate (8R)-dioxygenase, also called linoleate:oxygen 7S,8S-oxidoreductase, generates (9Z,12Z)-(7S,8S)-dihydroxyoctadeca-9,12-dienoate as a product. Other members are 5,8-linoleate dioxygenase (LDS, ppoA) and linoleate 10R-dioxygenase (ppoC), involved in the biosynthesis of oxylipins. Length = 550

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
KOG2408|consensus	719		99.97
PF03098	530	An_peroxidase: Animal haem peroxidase; InterPro: I	99.97
PLN02283	633	alpha-dioxygenase	99.85

>KOG2408|consensus

Probab=99.97  E-value=2.6e-32  Score=248.68  Aligned_cols=123  Identities=37%  Similarity=0.582  Sum_probs=108.7

Q ss_pred             hhhhhhhhHHHHHHHHHHhhhhhc----CcHHHHhhcccCCCCCC-cchHHHHHHhhhccCCCcHHHHHHHhCCCCCCCh
Q psy8807          12 SCLTSVIHWELVYSTCYRRAALLA----DDMVITDFLFRNGKPFG-RDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKF   86 (136)
Q Consensus        12 ~~~~~~~g~~~~~~g~~~~~~~~~----~~~~l~~~LF~~~~~~G-~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF   86 (136)
                      .+...-+||+++++|+..+.++..    .+.+++++||...+..+ +||+|||||||||||||+||+||++|||+++.+|
T Consensus       507 ~~i~~~ggid~llrGl~~~~~~~~~d~~~~~~i~~~lf~~~~~~~~~DL~ainIQRgRDhGlp~Yn~yR~~cgL~~~~s~  586 (719)
T KOG2408|consen  507 WLILNEGGIDPLLRGLTTQPAKMPDDQLLNGEITERLFVKTDEDGELDLAALNIQRGRDHGLPPYNEYRKFCGLSPATSF  586 (719)
T ss_pred             hhhhhccChhHHHHHHHhchhhcccchhcCHHHHHHHhhhcCcccccchhhhhhhccccCCCCCHHHHHHHcCCCCCCCH
Confidence            344455899999999999999998    57999999999877666 9999999999999999999999999999999999


Q ss_pred             hhHhhccCcCc-------------c------------------------------------------------CHHHHHH
Q psy8807          87 EDFLDVISPDL-------------L------------------------------------------------LEDQLAE  105 (136)
Q Consensus        87 ~dL~~~~~~~~-------------i------------------------------------------------t~~QL~e  105 (136)
                      +||..++.++.             |                                                |++||+|
T Consensus       587 edL~~~i~~~~~~kl~~lY~~~ddiDL~vG~~~E~~~~g~~vGPTl~cii~~Qf~r~r~gDRf~yen~~~~~Ft~~QL~e  666 (719)
T KOG2408|consen  587 EDLSDEIEPEIINKLRTLYGTPDDIDLYVGLLLEKPLPGGLVGPTLACIIAEQFLRLRDGDRFWYENFNPGVFTPEQLEE  666 (719)
T ss_pred             HHhhhhhhHHHHHHHHHhcCCchhhcccccccccccCCCceecccHHHHHHHHHHHHhccCceeecCCCCCccCHHHHHH
Confidence            99998887321             1                                                9999999


Q ss_pred             HHhccccchhhccCcccccccc-ccccCCC
Q psy8807         106 IKKASLARLLCDNSDEIHTMQP-AAFLKIS  134 (136)
Q Consensus       106 Irk~tla~iiC~n~d~i~~iQ~-~~F~~~~  134 (136)
                      |||+|||+|||+|++++..++. ++|..++
T Consensus       667 i~k~sLariiC~N~~~~~~~~~~~~f~~~~  696 (719)
T KOG2408|consen  667 IRKVSLARIICDNGTKITKVSRFDVFDFPD  696 (719)
T ss_pred             HHHhhchheeecCCcccccccccCCccccc
Confidence            9999999999999667888777 9998765

>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions

Probab=99.97  E-value=1.9e-31  Score=234.64  Aligned_cols=113  Identities=45%  Similarity=0.725  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHhhhhhcC-----cHHHHhhcccCCCCCC-cchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhh
Q psy8807          18 IHWELVYSTCYRRAALLAD-----DMVITDFLFRNGKPFG-RDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLD   91 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~-----~~~l~~~LF~~~~~~G-~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~   91 (136)
                      +|++.+++|+.++.++.++     +++|+++||++.+..+ +||+|+|||||||||||+||+||++|||+++++|+||..
T Consensus       352 ~gid~ll~G~~~~~a~~~d~~~~~~~~l~~~lf~~~~~~~~~DL~a~nIqRGRdhGLp~yn~~R~~cgl~~~~sf~dl~~  431 (530)
T PF03098_consen  352 GGIDPLLRGLASQPAQKVDNPRFLVDDLRNHLFGPRNVPGSLDLAALNIQRGRDHGLPSYNDYREFCGLPPATSFEDLTD  431 (530)
T ss_dssp             TCSHHHHHHHHHSEEEHHBTTBHSHHHHHTSEESTTSSSEEEHHHHHHHHHHHHTTB-BHHHHHHHTT----SSHHHHHH
T ss_pred             cchHHHHhHHhhCccccccHHHHhhhHhhcccccccCCcchhHHHHHHHHHHHHhCCchHHHHHHHhccCCCCCHHHhhh
Confidence            6899999999999888766     3899999998766555 599999999999999999999999999999999999976


Q ss_pred             ccCcCcc------------------------------------------------------------CHHHHHHHHhccc
Q psy8807          92 VISPDLL------------------------------------------------------------LEDQLAEIKKASL  111 (136)
Q Consensus        92 ~~~~~~i------------------------------------------------------------t~~QL~eIrk~tl  111 (136)
                      .++++.+                                                            |++||+||||+||
T Consensus       432 ~~~~~~i~~~L~~~Y~~vddvDL~vG~laE~~~~G~~lGpt~~~Ii~~qf~~l~~gDRf~yen~~~ft~~ql~~i~~~tl  511 (530)
T PF03098_consen  432 EISDEEIAAALRALYGHVDDVDLWVGGLAEKPVPGGLLGPTFSCIIAEQFSRLRRGDRFWYENPGSFTPEQLEEIRKTTL  511 (530)
T ss_dssp             HHTSHHHHHHHHHHHSSGGGSBHHHHHHHS-BSTTSSSBHHHHHHHHHHHHHHHHTSTTGTTSCTTCTHHHHHHHTTT-H
T ss_pred             hhhHHHHHHHHHHhccchhcccccceeeeeccccCCCCCHHHHhHHHHHHHHHHhcCcccccCcCcCCHHHHHHHHHCCH
Confidence            5554321                                                            9999999999999


Q ss_pred             cchhhccCccccccccccc
Q psy8807         112 ARLLCDNSDEIHTMQPAAF  130 (136)
Q Consensus       112 a~iiC~n~d~i~~iQ~~~F  130 (136)
                      |+|||+|+++++.||++||
T Consensus       512 a~iic~n~~~~~~iq~~~F  530 (530)
T PF03098_consen  512 ARIICDNTDDITRIQPNAF  530 (530)
T ss_dssp             HHHHHHHSTS-SEEESSTT
T ss_pred             HHHHHhcCCccccCCCCCC
Confidence            9999999988999999999

Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....

>PLN02283 alpha-dioxygenase

Probab=99.85  E-value=4.3e-22  Score=179.92  Aligned_cols=105  Identities=22%  Similarity=0.278  Sum_probs=83.7

Q ss_pred             hhHHHHHHHHHHhhhhhcC---cH-HHHh----hcccCCCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhH
Q psy8807          18 IHWELVYSTCYRRAALLAD---DM-VITD----FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDF   89 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~---~~-~l~~----~LF~~~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL   89 (136)
                      .|++.+++|+..+.+...+   .+ -+++    .++++..+.|+||+|+|||||||||||+||+||++|||+++++|+||
T Consensus       428 ~Gl~~ll~~l~~q~aga~~l~n~p~~l~~l~~~~~~g~~~~~g~DLaal~IqRgRDhGlp~YNefR~~~gL~~~~sFedl  507 (633)
T PLN02283        428 IGFEKLMVSMGHQACGALELWNYPSWMRDLVPQDIDGEDRPDHVDMAALEIYRDRERGVARYNEFRRNLLMIPISKWEDL  507 (633)
T ss_pred             cCHHHHHHHHhhcchhccccccCcHHHHhhhhccccCCcccccccHHHHHHHhhhhcCCccHHHHHHHcCCCCCCCHHHc
Confidence            6899999999777665532   12 2333    34555566899999999999999999999999999999999999998


Q ss_pred             hhc----------cC--cCcc------------------------------------------------CHHHHHHHHhc
Q psy8807          90 LDV----------IS--PDLL------------------------------------------------LEDQLAEIKKA  109 (136)
Q Consensus        90 ~~~----------~~--~~~i------------------------------------------------t~~QL~eIrk~  109 (136)
                      .+.          ..  .++|                                                |++|+++|+++
T Consensus       508 t~d~e~~~~L~~lY~~~vddVDL~VG~laE~~v~G~~vG~T~~~i~~~~a~r~~~gDRF~~en~np~~fT~~gl~~I~~t  587 (633)
T PLN02283        508 TDDEEAIEVLREVYGDDVEKLDLLVGLMAEKKIKGFAISETAFFIFLLMASRRLEADRFFTSNFNEKTYTKKGLEWVNTT  587 (633)
T ss_pred             CCCHHHHHHHHHHhCCCHHHHHhhhhheecccCCCCCcCHHHHHHHHHHHHHHhcCCCCeEecCCcCcCCHHHHHHHHcc
Confidence            631          11  1222                                                99999999997


Q ss_pred             -cccchhhccCccc
Q psy8807         110 -SLARLLCDNSDEI  122 (136)
Q Consensus       110 -tla~iiC~n~d~i  122 (136)
                       ||++|||+|...+
T Consensus       588 ~tl~dvl~r~~p~~  601 (633)
T PLN02283        588 ESLKDVIDRHYPEM  601 (633)
T ss_pred             CcHHHHHHHhCcch
Confidence             9999999998755

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
3f9p_C	467	Crystal Structure Of Myeloperoxidase From Human Leu		3e-07
1cxp_C	466	Cryogenic Crystal Structure Of Human Myeloperoxidas		3e-07
1myp_C	466	X-Ray Crystal Structure Of Canine Myeloperoxidase A		3e-07
2pt3_A	595	Crystal Structure Of Bovine Lactoperoxidase At 2.34		7e-07
2ips_A	595	Crystal Structure Of A Ternary Complex Of Bovine La		7e-07
2gj1_A	583	Crystal Structure Of Bovine Lactoperoxidase At 2.3a		7e-07
2o86_A	595	Crystal Structure Of A Ternary Complex Of Buffalo L		7e-07
2z5z_A	595	Crystal Structure Of The Complex Of Buffalo Lactope		8e-07
3erh_A	595	First Structural Evidence Of Substrate Specificity		2e-06
2gjm_A	583	Crystal Structure Of Buffalo Lactoperoxidase At 2.7		2e-06
2ikc_A	595	Crystal Structure Of Sheep Lactoperoxidase At 3.25		2e-06
3r5q_A	595	Crystal Structure Of Sheep Lactoperoxidase In Compl		2e-06
2e9e_A	595	Crystal Structure Of The Complex Of Goat Lactoperox		5e-06
2r5l_A	595	Crystal Structure Of Lactoperoxidase At 2.4a Resolu		5e-06

>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPR 82
           I + LF      G DL A+++QR RDHGL  YN +R FCGLP+
Sbjct: 290 IRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQ 332

>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPR 82
           I + LF      G DL A+++QR RDHGL  YN +R FCGLP+
Sbjct: 290 IRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQ 332

>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPR 82
           I + LF      G DL A+++QR RDHGL  YN +R FCGLP+
Sbjct: 290 IRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQ 332

>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLL 98
            FCGL +    +    V+   +L
Sbjct: 454 GFCGLSQPKTLKGLQTVLKNKIL 476

>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLL 98
            FCGL +    +    V+   +L
Sbjct: 454 GFCGLSQPKTLKGLQTVLKNKIL 476

>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 383 LVRGLLAKKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 441
Query: 76  AFCGLPRAYKFEDFLDVISPDLL 98
            FCGL +    +    V+   +L
Sbjct: 442 GFCGLSQPKTLKGLQTVLKNKIL 464

>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLL 98
            FCGL +    +    V+   +L
Sbjct: 454 GFCGLSQPKTLKGLQTVLKNKIL 476

>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLL 98
            FCGL +    +    V+   +L
Sbjct: 454 GFCGLSQPKTLKGLQTVLKNKIL 476

>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 29  RRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPR 82
           +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R FCGL +
Sbjct: 402 KKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQ 460
Query: 83  AYKFEDFLDVISPDLL 98
               +    V+   +L
Sbjct: 461 PKTLKGLQTVLKNKIL 476

>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 29  RRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPR 82
           +++ L+  D ++T  L RN       K  G DL AI++QR RDHG+  YN +R FCGL +
Sbjct: 390 KKSKLMNQDKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQ 448
Query: 83  AYKFEDFLDVISPDLL 98
               +    V+   +L
Sbjct: 449 PKTLKGLQTVLKNKIL 464

>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  + ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQNKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLLLEDQL 103
            FCGL +    +    V+   +L +  L
Sbjct: 454 GFCGLSQPKTLKGLQAVLKNKILAKKLL 481

>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     +++ L+  + ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKKSKLMNQNKMVTSEL-RNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLLLEDQL 103
            FCGL +    +    V+   +L +  L
Sbjct: 454 GFCGLSQPKTLKGLQAVLKNKILAKKLL 481

>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     + + L+  + ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKNSKLMNQNKMVTSEL-RNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLLLEDQL 103
            FCGL +    +    V+   +L +  L
Sbjct: 454 GFCGLSQPKTLKGLQAVLKNKVLAKKLL 481

>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 22  LVYSTCYRRAALLADDMVITDFLFRNG------KPFGRDLRAIDVQRGRDHGLASYNDYR 75
           LV     + + L+  + ++T  L RN       K  G DL AI++QR RDHG+  YN +R
Sbjct: 395 LVRGLLAKNSKLMNQNKMVTSEL-RNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWR 453
Query: 76  AFCGLPRAYKFEDFLDVISPDLLLEDQL 103
            FCGL +    +    V+   +L +  L
Sbjct: 454 GFCGLSQPKTLKGLQAVLKNKVLAKKLL 481

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	2e-18
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	3e-16
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	2e-15
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	9e-15

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587

 Score = 79.0 bits (194), Expect = 2e-18
 Identities = 18/149 (12%), Positives = 31/149 (20%), Gaps = 61/149 (40%)

Query: 43  FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRA------------------- 83
              RN     + +    + + R+    S N+YR    L                      
Sbjct: 404 AGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKAL 463

Query: 84  YKFEDFLD----------------------VISPD--------------------LLLED 101
           Y   D ++                      + +P                        E 
Sbjct: 464 YSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEV 523

Query: 102 QLAEIKKASLARLLCDNSDEIHTMQPAAF 130
               I  AS+  L+C+N            
Sbjct: 524 GFKIINTASIQSLICNNVKGCPFTSFNVQ 552

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466

 Score = 72.9 bits (178), Expect = 3e-16
 Identities = 23/56 (41%), Positives = 30/56 (53%)

Query: 40  ITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP 95
           I + LF      G DL A+++QR RDHGL  YN +R FCGLP+         V+  
Sbjct: 290 IRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRN 345

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595

 Score = 70.8 bits (172), Expect = 2e-15
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 21  ELVYSTCYRRAALLADDMVITD----FLFR-NGKPFGRDLRAIDVQRGRDHGLASYNDYR 75
            LV     +++ L+  D ++T      LF+   K  G DL AI++QR RDHG+  YN +R
Sbjct: 394 PLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWR 453

Query: 76  AFCGLPRAYKFEDFLDVISPDLLLE 100
            FCGL +    +    V+   +L +
Sbjct: 454 GFCGLSQPKTLKGLQTVLKNKILAK 478

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553

 Score = 68.5 bits (167), Expect = 9e-15
 Identities = 20/145 (13%), Positives = 34/145 (23%), Gaps = 61/145 (42%)

Query: 43  FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCG-------------------LPRA 83
              RN       +    ++  R   L  +N+YR   G                   L   
Sbjct: 404 GGGRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEEL 463

Query: 84  YKFEDFLD----------------------VISPD--------------------LLLED 101
           Y   D L+                      + +P                        E 
Sbjct: 464 YGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEV 523

Query: 102 QLAEIKKASLARLLCDNSDEIHTMQ 126
               +K A+L +L+C N+     + 
Sbjct: 524 GFNLVKTATLKKLVCLNTKTCPYVS 548

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	99.98
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	99.97
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	99.93
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	99.93

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...

Probab=99.98  E-value=2.7e-33  Score=249.48  Aligned_cols=116  Identities=29%  Similarity=0.495  Sum_probs=104.1

Q ss_pred             hhHHHHHHHHHHhhhh--hc---CcHHHHhhcccCCCCC-CcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhh
Q psy8807          18 IHWELVYSTCYRRAAL--LA---DDMVITDFLFRNGKPF-GRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLD   91 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~--~~---~~~~l~~~LF~~~~~~-G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~   91 (136)
                      +|++.+++||.++.+.  ..   .+++|+++||++.+.. |+||+|+|||||||||||+||+||++|||+++++|+||..
T Consensus       390 ~gid~llrGl~~q~a~~~~~d~~~~~~l~~~Lf~~~~~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl~~~~sf~dl~~  469 (595)
T 3q9k_A          390 GGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQT  469 (595)
T ss_dssp             TCSHHHHHHHHHSEEECCCTTSCSCHHHHTCEECTTSCSEEECHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHH
T ss_pred             cchHHHHHHHhhCcccccCCCccCCHHHHHHhccCCCccccccHHHHHHHHHHHhCCCCHHHHHHHcCCCCCCCHHHHhh
Confidence            6899999999999887  32   4699999999976666 9999999999999999999999999999999999999997


Q ss_pred             ccCcCcc------------------------------------------------------------CHHHHHHHHhccc
Q psy8807          92 VISPDLL------------------------------------------------------------LEDQLAEIKKASL  111 (136)
Q Consensus        92 ~~~~~~i------------------------------------------------------------t~~QL~eIrk~tl  111 (136)
                      .++++.|                                                            |++||+||||+||
T Consensus       470 ~~~~~~~~~~l~~lY~~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen~~~ft~~ql~ei~~~sl  549 (595)
T 3q9k_A          470 VLKNKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSF  549 (595)
T ss_dssp             HHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTSBTTBCHHHHHHHTTCCH
T ss_pred             hcCcHHHHHHHHHHhCCccccceeecccccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecCCCcCCHHHHHHHHhCCH
Confidence            6654321                                                            8999999999999


Q ss_pred             cchhhccCccccccccccccCCC
Q psy8807         112 ARLLCDNSDEIHTMQPAAFLKIS  134 (136)
Q Consensus       112 a~iiC~n~d~i~~iQ~~~F~~~~  134 (136)
                      |+|||+|+ +|+.||++||..++
T Consensus       550 a~iic~n~-~i~~vq~~~F~~~~  571 (595)
T 3q9k_A          550 SRLICDNT-HITKVPLHAFQANN  571 (595)
T ss_dssp             HHHHHHHS-SCCEEESSTTSCCC
T ss_pred             HHHHhcCC-CcccccHhhccCCC
Confidence            99999997 59999999999765

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*

Probab=99.97  E-value=2.7e-32  Score=236.78  Aligned_cols=116  Identities=31%  Similarity=0.467  Sum_probs=103.6

Q ss_pred             hhHHHHHHHHHHhhhhh--c---CcHHHHhhcccCCCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhhc
Q psy8807          18 IHWELVYSTCYRRAALL--A---DDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV   92 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~--~---~~~~l~~~LF~~~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~~   92 (136)
                      +|++.+++|+.++.+..  .   .+++|+++||++.+..|+||+|+|||||||||||+||+||++|||+++++|+||...
T Consensus       263 ~g~d~~lrgl~~q~a~~~~~d~~l~~~l~~~lf~~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~~  342 (466)
T 1d2v_C          263 GGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTV  342 (466)
T ss_dssp             TCHHHHHHHHHHSEEECCBTTBCSCHHHHTCBTGGGSSSCBCHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             cCchHHHHHHhhCccccccCchhhhHHHHHHhhcccCccchhHHHHHHHHHHHcCCCCHHHHHHHcCCCCCCCHHHHhhc
Confidence            68999999999887652  2   358999999998778899999999999999999999999999999999999999866


Q ss_pred             cCcC--------------cc----------------------------------------------CHHHHHHHHhcccc
Q psy8807          93 ISPD--------------LL----------------------------------------------LEDQLAEIKKASLA  112 (136)
Q Consensus        93 ~~~~--------------~i----------------------------------------------t~~QL~eIrk~tla  112 (136)
                      ++++              +|                                              |++|++||||+|||
T Consensus       343 ~~d~~~~~~L~~lY~~~d~vDL~vG~laE~~~~G~~~Gptf~~ii~~qf~rLr~gDRf~yen~~~ft~~ql~ei~~~sl~  422 (466)
T 1d2v_C          343 LRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLP  422 (466)
T ss_dssp             HTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTCSSCHHHHHHHHHHHHHHHHTCTTCTTSTTTSCHHHHHHHTTCCHH
T ss_pred             cCCHHHHHHHHHHhCCccccceeecccccccCCCCCCCHHHHHHHHHHHHHHHhcCcccccCCCcccchhhHHHHhCCHH
Confidence            5432              11                                              89999999999999


Q ss_pred             chhhccCccccccccc-cccCCC
Q psy8807         113 RLLCDNSDEIHTMQPA-AFLKIS  134 (136)
Q Consensus       113 ~iiC~n~d~i~~iQ~~-~F~~~~  134 (136)
                      +|||+|+ +++.||++ ||..++
T Consensus       423 ~iic~n~-~~~~iq~~~~F~~~~  444 (466)
T 1d2v_C          423 RIICDNT-GITTVSKNNIFMSNS  444 (466)
T ss_dssp             HHHHHHS-SCCEEECSCTTTCCS
T ss_pred             HHHHhcC-CCcccCCCccccCCC
Confidence            9999999 59999999 999876

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=99.93  E-value=4.8e-27  Score=209.06  Aligned_cols=108  Identities=17%  Similarity=0.183  Sum_probs=88.9

Q ss_pred             hhHHHHHHHHHHhhhhhcCcHHHHhhcccCCCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhhc--c--
Q psy8807          18 IHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV--I--   93 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~~~~l~~~LF~~~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~~--~--   93 (136)
                      +|++.+++||..+.+..++.  .+++     ...++||+|+|||||||||||+||+||++|||+++++|+||.+.  +  
T Consensus       386 ~gid~llrgl~~q~a~~~~~--~~n~-----~~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~~~~~~~  458 (587)
T 3nt1_A          386 HGLTQFVESFTRQIAGRVAG--GRNV-----PIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAA  458 (587)
T ss_dssp             HHHHHHHHHHHHSBCBCSSS--SSCB-----CGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHH
T ss_pred             hhHHHHHHHHHHhhhhcccc--cccC-----chHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCCCHHHHH
Confidence            68999999999998877642  2222     34689999999999999999999999999999999999999742  0  


Q ss_pred             -------CcCcc-------------------------------------------------CHHH-HHHHHhccccchhh
Q psy8807          94 -------SPDLL-------------------------------------------------LEDQ-LAEIKKASLARLLC  116 (136)
Q Consensus        94 -------~~~~i-------------------------------------------------t~~Q-L~eIrk~tla~iiC  116 (136)
                             .+++|                                                 |.+| +++|||+|||+|||
T Consensus       459 ~L~~lY~~~ddIDL~vGglaE~~~pG~~vGpTf~ci~~qf~l~~~~~~~r~gDrfw~~~~Ft~~qgl~~I~~~sL~~lic  538 (587)
T 3nt1_A          459 ELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLIC  538 (587)
T ss_dssp             HHHHHHSSGGGCCHHHHHHHSCCSTTCSSCHHHHHHHHHHHHHHHHTSGGGSTTTSSGGGGTSHHHHHHHHTCCHHHHHH
T ss_pred             HHHHHhCCHhheeeecccccccCCCCccHHHHHHHHHHHHHHHHHhcCcccCCcccCcCccChHHHHHHHHHCCHHHHHH
Confidence                   11222                                                 6788 89999999999999


Q ss_pred             ccCccccccccccccCCCC
Q psy8807         117 DNSDEIHTMQPAAFLKISK  135 (136)
Q Consensus       117 ~n~d~i~~iQ~~~F~~~~~  135 (136)
                      +|++.   +|.++|.+|+.
T Consensus       539 ~N~~~---~p~~~F~~p~~  554 (587)
T 3nt1_A          539 NNVKG---CPFTSFNVQDP  554 (587)
T ss_dssp             HHSTT---CCCCCSBCC--
T ss_pred             hCCCC---CCcceeECCCc
Confidence            99985   99999999875

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=99.93  E-value=2.1e-26  Score=203.36  Aligned_cols=107  Identities=19%  Similarity=0.177  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHhhhhhcCcHHHHhhcccCCCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhhc--c--
Q psy8807          18 IHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV--I--   93 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~~~~l~~~LF~~~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~~--~--   93 (136)
                      +|++.+++|+.++.+..++  ++++.     ...++||+|+|||||||||||+||+||++|||+++++|+||.+.  +  
T Consensus       386 ~g~~~ll~g~~~q~a~~~~--~~~n~-----~~~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~d~~~~~  458 (553)
T 1q4g_A          386 YGVEALVDAFSRQPAGRIG--GGRNI-----DHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAA  458 (553)
T ss_dssp             HCHHHHHHHHHHSBCBCSS--SSSCB-----CTTTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHH
T ss_pred             ccHHHHHHHhhhchhhccc--ccccC-----cHHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcCCHHHHH
Confidence            7899999999999888763  23332     34689999999999999999999999999999999999999741  0  


Q ss_pred             -------CcCcc-------------------------------------------------CHHHHHHHHh-ccccchhh
Q psy8807          94 -------SPDLL-------------------------------------------------LEDQLAEIKK-ASLARLLC  116 (136)
Q Consensus        94 -------~~~~i-------------------------------------------------t~~QL~eIrk-~tla~iiC  116 (136)
                             .+++|                                                 |++|+.||+| +|||+|||
T Consensus       459 ~L~~lY~~~ddiDL~vG~laE~~~~G~~~Gpt~~~ii~~~~~~~l~~~~~~d~~~~~~~~ft~~ql~ei~~~~sla~iic  538 (553)
T 1q4g_A          459 ELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVC  538 (553)
T ss_dssp             HHHHHHSSGGGCCHHHHHHHSCBCTTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTCSGGGGTSHHHHHHHHTCCHHHHHH
T ss_pred             HHHHHhcChhhccccccccccccCCCCCccHHHHHHHHHHHHHHHhhCcCCCccccCCCCcCHHHHHHHHHhCCHHHHHH
Confidence                   11222                                                 8899999977 69999999


Q ss_pred             ccCccccccccccccCCC
Q psy8807         117 DNSDEIHTMQPAAFLKIS  134 (136)
Q Consensus       117 ~n~d~i~~iQ~~~F~~~~  134 (136)
                      +|++   .||.++|.+|+
T Consensus       539 ~n~~---~~p~~~F~~p~  553 (553)
T 1q4g_A          539 LNTK---TCPYVSFHVPD  553 (553)
T ss_dssp             TTSS---SCCCCCSBCCC
T ss_pred             HcCC---CCCcccccCCC
Confidence            9997   79999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	136
g1cxp.1	570	a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi	3e-21
d1cvua1	511	a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou	2e-14
d1q4ga1	511	a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She	5e-13
d1q4ga1	511	a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She	1e-06

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.5 bits (162), Expect = 2e-14
 Identities = 20/143 (13%), Positives = 33/143 (23%), Gaps = 63/143 (44%)

Query: 43  FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCG-------------------LPRA 83
              RN     + +    + + R+    S N+YR                       L   
Sbjct: 363 AGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKAL 422

Query: 84  YKFEDFLDVISPDLLLED------------------------------------------ 101
           Y   D +++  P LL+E                                           
Sbjct: 423 YSDIDVMELY-PALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGE 481

Query: 102 -QLAEIKKASLARLLCDNSDEIH 123
                I  AS+  L+C+N     
Sbjct: 482 VGFKIINTASIQSLICNNVKGCP 504

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 62.3 bits (151), Expect = 5e-13
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 43  FLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLD 91
              RN       +    ++  R   L  +N+YR   G+     F++   
Sbjct: 362 GGGRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG 410

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 7/33 (21%), Positives = 13/33 (39%)

Query: 95  PDLLLEDQLAEIKKASLARLLCDNSDEIHTMQP 127
                E     +K A+L +L+C N+     +  
Sbjct: 475 STFGGEVGFNLVKTATLKKLVCLNTKTCPYVSF 507

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
g1cxp.1	570	Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606	99.97
d1q4ga1	511	Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax	99.91
d1cvua1	511	Prostaglandin H2 synthase {Mouse (Mus musculus) [T	99.89

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.91  E-value=3e-25  Score=192.49  Aligned_cols=107  Identities=21%  Similarity=0.198  Sum_probs=86.6

Q ss_pred             hhHHHHHHHHHHhhhhhcCcHHHHhhcccCCCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhhc--c--
Q psy8807          18 IHWELVYSTCYRRAALLADDMVITDFLFRNGKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDV--I--   93 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~~~~l~~~LF~~~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~~--~--   93 (136)
                      .|++.+++|+.++.+..++.       +......++||+++|||||||||||+||+||++|||+++++|+||.+.  +  
T Consensus       344 ~g~~~l~~gl~~q~a~~~~~-------~~~~~~~~~dl~~~~IqRgRd~Glp~YN~~R~~~gL~~~~sFedl~~d~~~~~  416 (511)
T d1q4ga1         344 YGVEALVDAFSRQPAGRIGG-------GRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAA  416 (511)
T ss_dssp             HCHHHHHHHHHHSBCBCSSS-------SSCBCTTTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHH
T ss_pred             cchHHHHHHHhhCccccccc-------cccCChhHHHHHHHHHHHHHhcCCCcHHHHHHHcCCCcCCCHHHhCCCHHHHH
Confidence            58999999999988876532       122345789999999999999999999999999999999999999751  0  


Q ss_pred             -------CcCcc--------------------------------------------------CHHHHHHHHhccccchhh
Q psy8807          94 -------SPDLL--------------------------------------------------LEDQLAEIKKASLARLLC  116 (136)
Q Consensus        94 -------~~~~i--------------------------------------------------t~~QL~eIrk~tla~iiC  116 (136)
                             ++++|                                                  ++.||++|||+|||+|||
T Consensus       417 ~L~~lYg~vddVDL~vG~laE~~~~G~~~GpT~~~ii~~qf~r~~~gDRf~~e~~~~~~~f~~~~ql~~i~~~tL~~iic  496 (511)
T d1q4ga1         417 ELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVC  496 (511)
T ss_dssp             HHHHHHSSGGGCCHHHHHHHSCBCTTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTCSGGGGTSHHHHHHHHTCCHHHHHH
T ss_pred             HHHHHhCCHhHhhHhhchhccccCCCCCCCHHHHHHHHHHHHHHHhcCCccccCcCCCCCCCCHHHHHHHHHCCHHHHHH
Confidence                   01122                                                  789999999999999999


Q ss_pred             ccCccccccccccccCCC
Q psy8807         117 DNSDEIHTMQPAAFLKIS  134 (136)
Q Consensus       117 ~n~d~i~~iQ~~~F~~~~  134 (136)
                      +|++++   |..+|.+|+
T Consensus       497 ~N~~~~---~~~~f~vpd  511 (511)
T d1q4ga1         497 LNTKTC---PYVSFHVPD  511 (511)
T ss_dssp             TTSSSC---CCCCSBCCC
T ss_pred             hCCCCC---CcccccCCC
Confidence            999865   455576663

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.7e-24  Score=187.82  Aligned_cols=101  Identities=18%  Similarity=0.191  Sum_probs=81.2

Q ss_pred             hhHHHHHHHHHHhhhhhcCcHHHHhhcccC--CCCCCcchHHHHHHhhhccCCCcHHHHHHHhCCCCCCChhhHhhccCc
Q psy8807          18 IHWELVYSTCYRRAALLADDMVITDFLFRN--GKPFGRDLRAIDVQRGRDHGLASYNDYRAFCGLPRAYKFEDFLDVISP   95 (136)
Q Consensus        18 ~g~~~~~~g~~~~~~~~~~~~~l~~~LF~~--~~~~G~DL~AinIQRGRDHGlp~Yn~~R~~Cgl~~~~sF~dL~~~~~~   95 (136)
                      .|++.+++|+.++.+..         +|+.  ....+.||+|+|||||||||||+||+||++|||+++++|+||.+  ++
T Consensus       345 ~gl~~~~~~~~~q~a~~---------~~~~~n~~~~~~dl~al~IqRgRd~Glp~yN~~R~~~gL~~~~sFedl~~--d~  413 (511)
T d1cvua1         345 HGLTQFVESFTRQIAGR---------VAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EK  413 (511)
T ss_dssp             HHHHHHHHHHHHSBCBC---------STTSSCBCGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS--SS
T ss_pred             cCHHHHHHHHHHHHhhh---------cccccCCCchhhhHHHhhhHhHhhcCCCcHHHHHHHcCCCCCCCHHHhCC--CH
Confidence            57889999987776544         3322  23457899999999999999999999999999999999999975  22


Q ss_pred             C-------------cc-------------------------------------------------C-HHHHHHHHhcccc
Q psy8807          96 D-------------LL-------------------------------------------------L-EDQLAEIKKASLA  112 (136)
Q Consensus        96 ~-------------~i-------------------------------------------------t-~~QL~eIrk~tla  112 (136)
                      +             +|                                                 | +.||++|||+|||
T Consensus       414 ~~~~~L~~lY~~vddVDL~vG~laE~~~~g~~~GpT~~~ii~~qf~r~r~gDRf~~e~~~~p~~ft~~~ql~~i~~~tLa  493 (511)
T d1cvua1         414 EMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQ  493 (511)
T ss_dssp             HHHHHHHHHHSSGGGCCHHHHHHHSCCSTTCSSCHHHHHHHHHHHHHHHHTSGGGSTTTSSGGGGTSHHHHHHHHTCCHH
T ss_pred             HHHHHHHHHhCChhHhhhhhchhccCcCCCCCCCHHHHHHHHHHHHHHHhcCCccccCCCCCCCcCcHHHHHHHHHCcHH
Confidence            2             12                                                 4 6799999999999


Q ss_pred             chhhccCccccccccccccC
Q psy8807         113 RLLCDNSDEIHTMQPAAFLK  132 (136)
Q Consensus       113 ~iiC~n~d~i~~iQ~~~F~~  132 (136)
                      +|||+|+++   ++..+|.+
T Consensus       494 ~iic~N~~~---~p~~~f~v  510 (511)
T d1cvua1         494 SLICNNVKG---CPFTSFNV  510 (511)
T ss_dssp             HHHHHHSTT---CCCCCSBC
T ss_pred             HHHHhCCCC---CCCccccC
Confidence            999999986   45666653