Psyllid ID: psy8856

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYRYN
ccEEEEccccccEEEEcccccccccccccccccccEEEEccEEEEccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHcccccccEEEEcccccEEEEEEEEccccEEEEEEccccccccccccccccccEEEEEccccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHcccEEEccHHHHHHHHccccccHHHHHccccEEEEEEcccccEEEEcccEEEEcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccc
ccEEEEEHHHHHHEEccccHHHHHHcHHHccEEEEEEEccHHHHHcccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHccccccEEEEEccccccEEEEEEccccccEEEEcccHHHHHHHccccccccccEEEEccccHHHHHHHHHHHHHccccEEEccccccccccHHHHHHHHHHccEEEEcHHHHHHHHHHccccHHHHHHHccEEEEEcccccEEEEEccccEEEEcccccHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHEEEEccccccccccHHHHHHHHHHHHccccc
mnslicgslafDNIMRFegkfsnsllpdqldkinvsfysptmkkeyggcagnIAYNLkllngnpliVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVtdvnnnqitifhpgamqlsyddncinnadIKIAIISPDNCCNMIKHIKKILKLkipfifdpgqslsmfTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRgelgsdiflnnerkikipcvkadrivdptgcgdafrSGVLFGIInnldwyttgrlsslmgsteishqggqkhcpslSEIDQRFKEAFGYRYN
MNSLICGSLAFDNIMRFEGKfsnsllpdqlDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTrgelgsdiflnnerkikipcvkadrivdPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHqggqkhcpslseIDQRFKEAFGYRYN
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMikhikkilklkipfifDPGQSLSMFTKEELikiikkssyiiVNEYEskllvsktslslqkINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYRYN
***LICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSL**********************************
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFG****
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGS************PSLSEIDQRFKEAFGYRYN
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYRYN
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MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYRYN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
P83734324 Adenosine kinase OS=Mycob yes N/A 0.977 0.941 0.314 1e-41
A5U4N0324 Adenosine kinase OS=Mycob yes N/A 0.977 0.941 0.314 1e-41
P83736324 Adenosine kinase OS=Mycob yes N/A 0.977 0.941 0.314 1e-41
Q57849302 Uncharacterized sugar kin yes N/A 0.935 0.966 0.305 1e-31
O27587309 Uncharacterized sugar kin yes N/A 0.919 0.928 0.280 1e-25
Q9CF42300 Ribokinase OS=Lactococcus yes N/A 0.75 0.78 0.290 6e-11
O29891250 Uncharacterized sugar kin no N/A 0.705 0.88 0.226 2e-08
A7ZE26 472 Bifunctional protein HldE yes N/A 0.926 0.612 0.236 5e-07
B7V388 473 Bifunctional protein HldE yes N/A 0.644 0.424 0.243 5e-07
A6VDB5 474 Bifunctional protein HldE no N/A 0.644 0.424 0.238 5e-07
>sp|P83734|ADOK_MYCTU Adenosine kinase OS=Mycobacterium tuberculosis GN=adoK PE=1 SV=2 Back     alignment and function desciption
 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 10/315 (3%)

Query: 1   MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
           M   + GS+A D++MRF G+FS  LLP+ L K+++SF    +    GG AGN+A+ + +L
Sbjct: 1   MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVL 60

Query: 61  NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
            G   +V   G D + Y   LK  G++  ++    +  TA+    TDV+  QI  F+PGA
Sbjct: 61  GGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGA 120

Query: 121 MQLSYDDNCINNADI-------KIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMF 173
           M  + +   I  AD+       ++ II  ++   M  H ++  KL + F  DP Q L+  
Sbjct: 121 MSEARN---IKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARL 177

Query: 174 TKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNER 233
           + EE+ +++  ++Y+  N+YE  LL+SKT  S   +  Q+ + + T G  G D+   +  
Sbjct: 178 SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGT 237

Query: 234 KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHC 293
            I +  V      DPTG GDAFR+G L G    L    + +L SL+    +   G Q+  
Sbjct: 238 TIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQ 297

Query: 294 PSLSEIDQRFKEAFG 308
                   R   A+G
Sbjct: 298 WDYEAAASRLAGAYG 312
ATP dependent phosphorylation of adenosine to monophosphate derivatives.
Mycobacterium tuberculosis (taxid: 1773)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 0
>sp|A5U4N0|ADOK_MYCTA Adenosine kinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=adoK PE=1 SV=1 Back     alignment and function description
>sp|P83736|ADOK_MYCBO Adenosine kinase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=adoK PE=3 SV=2 Back     alignment and function description
>sp|Q57849|Y406_METJA Uncharacterized sugar kinase MJ0406 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0406 PE=1 SV=1 Back     alignment and function description
>sp|O27587|Y1544_METTH Uncharacterized sugar kinase MTH_1544 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_1544 PE=3 SV=1 Back     alignment and function description
>sp|Q9CF42|RBSK_LACLA Ribokinase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=rbsK PE=3 SV=1 Back     alignment and function description
>sp|O29891|Y356_ARCFU Uncharacterized sugar kinase AF_0356 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0356 PE=3 SV=1 Back     alignment and function description
>sp|A7ZE26|HLDE_CAMC1 Bifunctional protein HldE OS=Campylobacter concisus (strain 13826) GN=hldE PE=3 SV=1 Back     alignment and function description
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58) GN=hldE PE=3 SV=1 Back     alignment and function description
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7) GN=hldE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
124483556359 Sugar kinase ribokinase family protein [ 0.993 0.863 0.562 1e-107
300309726311 sugar kinase [Herbaspirillum seropedicae 0.993 0.996 0.562 1e-107
409408955311 sugar kinase ribokinase family protein [ 0.996 1.0 0.541 1e-105
399021222311 sugar kinase, ribokinase [Herbaspirillum 0.993 0.996 0.556 1e-105
134095929310 adenosine kinase [Herminiimonas arsenico 0.990 0.996 0.564 1e-105
415904621333 Sugar kinase ribokinase family protein [ 0.996 0.933 0.532 1e-104
152980922310 sugar kinase [Janthinobacterium sp. Mars 0.990 0.996 0.548 1e-102
340785966325 sugar kinase, ribokinase family [Collimo 0.990 0.950 0.545 1e-102
329915398310 Sugar kinase [Oxalobacteraceae bacterium 0.993 1.0 0.533 1e-101
427400640313 hypothetical protein HMPREF9710_01474 [M 0.990 0.987 0.509 1e-96
>gi|124483556|emb|CAM32651.1| Sugar kinase ribokinase family protein [Herbaspirillum seropedicae] Back     alignment and taxonomy information
 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/311 (56%), Positives = 236/311 (75%), Gaps = 1/311 (0%)

Query: 1   MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
           M+SLICGSLA+DNIM++EG+F+ +LL DQL K+NVSF  PTM++E+GGCAGNIAYNLKLL
Sbjct: 49  MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 108

Query: 61  NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
            G+P+I++ +G D + YL+    LGIS + +++I+S FTAQCFI TD ++NQIT FHPGA
Sbjct: 109 GGDPVIMATVGLDSAPYLERFAELGISTRCVRQIDSSFTAQCFITTDADSNQITAFHPGA 168

Query: 121 MQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIK 180
           M  S+++   +   +K AI++PD    M++H ++  +L IP IFDPGQ + MF  E+L  
Sbjct: 169 MTWSHENKVADAGPVKFAIVAPDGRDGMLQHAQQAAELNIPLIFDPGQGMPMFDGEDLKN 228

Query: 181 IIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCV 240
            I  ++Y+ VN+YE++LL ++T LSL +I E+ K LIVTRGELG+DIF    +K  IPCV
Sbjct: 229 FIDLATYVAVNDYEAELLTARTGLSLAQIAERTKALIVTRGELGADIF-EGGKKFDIPCV 287

Query: 241 KADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEID 300
            ADRI DPTGCGDAFR+G+LFG+    DW TTGRL+SLMGS +I+ QG Q H PS +EI+
Sbjct: 288 PADRIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSLKIASQGPQNHAPSRAEIE 347

Query: 301 QRFKEAFGYRY 311
           +RF  AFGYR+
Sbjct: 348 ERFHAAFGYRF 358

Source: Herbaspirillum seropedicae

Species: Herbaspirillum seropedicae

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|300309726|ref|YP_003773818.1| sugar kinase [Herbaspirillum seropedicae SmR1] gi|300072511|gb|ADJ61910.1| sugar kinase ribokinase family protein [Herbaspirillum seropedicae SmR1] Back     alignment and taxonomy information
>gi|409408955|ref|ZP_11257390.1| sugar kinase ribokinase family protein [Herbaspirillum sp. GW103] gi|386432277|gb|EIJ45105.1| sugar kinase ribokinase family protein [Herbaspirillum sp. GW103] Back     alignment and taxonomy information
>gi|399021222|ref|ZP_10723340.1| sugar kinase, ribokinase [Herbaspirillum sp. CF444] gi|398092998|gb|EJL83394.1| sugar kinase, ribokinase [Herbaspirillum sp. CF444] Back     alignment and taxonomy information
>gi|134095929|ref|YP_001101004.1| adenosine kinase [Herminiimonas arsenicoxydans] gi|133739832|emb|CAL62883.1| Carbohydrate kinase [Herminiimonas arsenicoxydans] Back     alignment and taxonomy information
>gi|415904621|ref|ZP_11552367.1| Sugar kinase ribokinase family protein [Herbaspirillum frisingense GSF30] gi|407763527|gb|EKF72185.1| Sugar kinase ribokinase family protein [Herbaspirillum frisingense GSF30] Back     alignment and taxonomy information
>gi|152980922|ref|YP_001354665.1| sugar kinase [Janthinobacterium sp. Marseille] gi|151280999|gb|ABR89409.1| sugar kinase [Janthinobacterium sp. Marseille] Back     alignment and taxonomy information
>gi|340785966|ref|YP_004751431.1| sugar kinase, ribokinase family [Collimonas fungivorans Ter331] gi|340551233|gb|AEK60608.1| Sugar kinase, ribokinase family [Collimonas fungivorans Ter331] Back     alignment and taxonomy information
>gi|329915398|ref|ZP_08276253.1| Sugar kinase [Oxalobacteraceae bacterium IMCC9480] gi|327544924|gb|EGF30273.1| Sugar kinase [Oxalobacteraceae bacterium IMCC9480] Back     alignment and taxonomy information
>gi|427400640|ref|ZP_18891878.1| hypothetical protein HMPREF9710_01474 [Massilia timonae CCUG 45783] gi|425720153|gb|EKU83076.1| hypothetical protein HMPREF9710_01474 [Massilia timonae CCUG 45783] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
UNIPROTKB|P83734324 adoK "Adenosine kinase" [Mycob 0.977 0.941 0.285 1.3e-27
DICTYBASE|DDB_G0280893318 rbsk "ribokinase" [Dictyosteli 0.349 0.342 0.25 1.8e-05
UNIPROTKB|P32143298 yihV "predicted sugar kinase" 0.253 0.265 0.283 5.5e-05
DICTYBASE|DDB_G0292440355 DDB_G0292440 "carbohydrate/pur 0.208 0.183 0.318 0.00013
TAIR|locus:2178883353 Mik "AT5G58730" [Arabidopsis t 0.253 0.223 0.357 0.00015
TAIR|locus:2165361343 AT5G51830 [Arabidopsis thalian 0.445 0.405 0.218 0.00046
FB|FBgn0032424 429 CG17010 [Drosophila melanogast 0.253 0.184 0.283 0.00063
TAIR|locus:2013094355 AT1G19600 [Arabidopsis thalian 0.233 0.205 0.310 0.00076
UNIPROTKB|P83734 adoK "Adenosine kinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 90/315 (28%), Positives = 136/315 (43%)

Query:     1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
             M   + GS+A D++MRF G+FS  LLP+ L K+++SF    +    GG AGN+A+ + +L
Sbjct:     1 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVL 60

Query:    61 NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
              G   +V   G D + Y   LK  G++  ++    +  TA+    TDV+  QI  F+PGA
Sbjct:    61 GGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGA 120

Query:   121 MQLSYDDNCINNADIKIAIISPDNC---CN----MXXXXXXXXXXXXXXXXDPGQSLSMF 173
             M  + +   I  AD+  AI  P+      N    M                DP Q L+  
Sbjct:   121 MSEARN---IKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARL 177

Query:   174 TKEELXXXXXXXXXXXVNEYEXXXXXXXXXXXXXXINEQVKVLIVTRGELGSDIFLNNER 233
             + EE+            N+YE              +  Q+ + + T G  G D+   +  
Sbjct:   178 SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGT 237

Query:   234 KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHC 293
              I +  V      DPTG GDAFR+G L G    L    + +L SL+    +   G Q+  
Sbjct:   238 TIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQ 297

Query:   294 PSLSEIDQRFKEAFG 308
                     R   A+G
Sbjct:   298 WDYEAAASRLAGAYG 312
GO:0000287 "magnesium ion binding" evidence=IDA
GO:0004001 "adenosine kinase activity" evidence=IDA
GO:0005524 "ATP binding" evidence=IDA
GO:0005525 "GTP binding" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0032567 "dGTP binding" evidence=IDA
GO:0042803 "protein homodimerization activity" evidence=IPI
DICTYBASE|DDB_G0280893 rbsk "ribokinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P32143 yihV "predicted sugar kinase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292440 DDB_G0292440 "carbohydrate/purine kinase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2178883 Mik "AT5G58730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0032424 CG17010 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2013094 AT1G19600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A5U4N0ADOK_MYCTA2, ., 7, ., 1, ., 2, 00.31420.97750.9413yesN/A
O27587Y1544_METTH2, ., 7, ., 1, ., -0.28070.91980.9288yesN/A
P83734ADOK_MYCTU2, ., 7, ., 1, ., 2, 00.31420.97750.9413yesN/A
P83736ADOK_MYCBO2, ., 7, ., 1, ., 2, 00.31420.97750.9413yesN/A
P36945RBSK_BACSU2, ., 7, ., 1, ., 1, 50.20990.84930.9044yesN/A
Q57849Y406_METJA2, ., 7, ., 1, ., -0.30510.93580.9668yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.200.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
cd01942279 cd01942, ribokinase_group_A, Ribokinase-like subgr 2e-87
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 1e-42
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 1e-35
cd01168312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 3e-18
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 4e-18
cd01166294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 2e-16
cd01167295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 1e-15
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 2e-15
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 1e-14
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 1e-13
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 1e-11
cd01946277 cd01946, ribokinase_group_C, Ribokinase-like subgr 7e-10
cd01937254 cd01937, ribokinase_group_D, Ribokinase-like subgr 1e-09
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 2e-09
cd01947265 cd01947, Guanosine_kinase_like, Guanosine kinase-l 2e-09
TIGR03168303 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki 5e-08
cd01945284 cd01945, ribokinase_group_B, Ribokinase-like subgr 7e-08
PLN02813426 PLN02813, PLN02813, pfkB-type carbohydrate kinase 2e-06
cd01164289 cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr 3e-06
COG1105310 COG1105, FruK, Fructose-1-phosphate kinase and rel 2e-05
TIGR02198315 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, 3e-05
PRK09434304 PRK09434, PRK09434, aminoimidazole riboside kinase 3e-05
cd01940264 cd01940, Fructoselysine_kinase_like, Fructoselysin 5e-05
COG2870 467 COG2870, RfaE, ADP-heptose synthase, bifunctional 2e-04
PLN02341470 PLN02341, PLN02341, pfkB-type carbohydrate kinase 2e-04
cd01944289 cd01944, YegV_kinase_like, YegV-like sugar kinase 4e-04
PLN02630335 PLN02630, PLN02630, pfkB-type carbohydrate kinase 6e-04
PTZ00247345 PTZ00247, PTZ00247, adenosine kinase; Provisional 7e-04
PLN02379367 PLN02379, PLN02379, pfkB-type carbohydrate kinase 0.001
PLN02323330 PLN02323, PLN02323, probable fructokinase 0.004
TIGR03828304 TIGR03828, pfkB, 1-phosphofructokinase 0.004
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information 
 Score =  262 bits (672), Expect = 2e-87
 Identities = 92/292 (31%), Positives = 158/292 (54%), Gaps = 20/292 (6%)

Query: 4   LICGSLAFDNI---MRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
            + G L +D I     F G F              S     +++E+GG AGN A  L  L
Sbjct: 3   AVVGHLNYDIILKVESFPGPFE-------------SVLVKDLRREFGGSAGNTAVALAKL 49

Query: 61  NGNPLIVSILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHP 118
             +P +V+ +G+D  G  YL+ L+  G+   +++ ++   T   FI+TD ++NQI  F+P
Sbjct: 50  GLSPGLVAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYP 109

Query: 119 GAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEEL 178
           GAM    + N   + D    I+   +   +I+  +++    I   FDPGQ L   + EEL
Sbjct: 110 GAMDE-LEPNDEADPDGLADIVHLSSGPGLIELARELAAGGITVSFDPGQELPRLSGEEL 168

Query: 179 IKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIP 238
            +I++++  + VN+YE++LL  +T LS  ++   V+V++VT G  G+ +F  +  ++++P
Sbjct: 169 EEILERADILFVNDYEAELLKERTGLSEAELASGVRVVVVTLGPKGAIVF-EDGEEVEVP 227

Query: 239 CVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQ 290
            V A ++VD TG GDAFR+G L+G++   D   + RL +L  S ++  +G Q
Sbjct: 228 AVPAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAASLKVERRGAQ 279

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C Back     alignment and domain information
>gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases Back     alignment and domain information
>gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information
>gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I Back     alignment and domain information
>gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase Back     alignment and domain information
>gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional Back     alignment and domain information
>gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase Back     alignment and domain information
>gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
PTZ00292326 ribokinase; Provisional 100.0
PRK11142306 ribokinase; Provisional 100.0
PLN02323330 probable fructokinase 100.0
PLN02813426 pfkB-type carbohydrate kinase family protein 100.0
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 100.0
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 100.0
PLN02341470 pfkB-type carbohydrate kinase family protein 100.0
PLN02543496 pfkB-type carbohydrate kinase family protein 100.0
PLN02967581 kinase 100.0
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 100.0
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 100.0
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 100.0
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 100.0
PRK09850313 pseudouridine kinase; Provisional 100.0
PRK09434304 aminoimidazole riboside kinase; Provisional 100.0
PLN02379367 pfkB-type carbohydrate kinase family protein 100.0
PTZ00247345 adenosine kinase; Provisional 100.0
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 100.0
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 100.0
PRK15074434 inosine/guanosine kinase; Provisional 100.0
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 100.0
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 100.0
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 100.0
PRK09954362 putative kinase; Provisional 100.0
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 100.0
PRK09513312 fruK 1-phosphofructokinase; Provisional 100.0
KOG2855|consensus330 100.0
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 100.0
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 100.0
PRK13508309 tagatose-6-phosphate kinase; Provisional 100.0
PRK10294309 6-phosphofructokinase 2; Provisional 100.0
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 100.0
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 100.0
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 100.0
PRK09813260 fructoselysine 6-kinase; Provisional 100.0
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 100.0
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 100.0
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 100.0
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 100.0
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 100.0
PLN02630335 pfkB-type carbohydrate kinase family protein 100.0
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 100.0
PLN02548332 adenosine kinase 100.0
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 100.0
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 100.0
KOG2854|consensus343 100.0
KOG2947|consensus308 100.0
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.98
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.96
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.79
PRK12412268 pyridoxal kinase; Reviewed 99.77
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 99.74
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.74
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.73
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.73
PRK05756286 pyridoxamine kinase; Validated 99.72
PRK07105284 pyridoxamine kinase; Validated 99.7
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 99.7
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 99.67
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 99.67
PRK12616270 pyridoxal kinase; Reviewed 99.66
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.5
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 99.45
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.44
PTZ00344296 pyridoxal kinase; Provisional 99.44
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.44
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.42
KOG3009|consensus614 99.39
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.37
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.32
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 99.32
PLN02978308 pyridoxal kinase 99.3
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 99.18
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 99.08
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 98.92
PRK09355263 hydroxyethylthiazole kinase; Validated 98.76
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 98.65
KOG2598|consensus 523 97.82
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 97.8
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 97.72
PRK14039453 ADP-dependent glucokinase; Provisional 97.62
PRK10565508 putative carbohydrate kinase; Provisional 97.56
KOG2599|consensus308 97.51
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 97.43
PRK03979463 ADP-specific phosphofructokinase; Provisional 97.41
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 97.23
PRK14038453 ADP-dependent glucokinase; Provisional 97.21
PF04587444 ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco 96.23
COG0063284 Predicted sugar kinase [Carbohydrate transport and 94.99
cd01938445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 93.87
KOG3974|consensus306 93.21
>PTZ00292 ribokinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-45  Score=328.50  Aligned_cols=293  Identities=20%  Similarity=0.299  Sum_probs=245.4

Q ss_pred             CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856           1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL   78 (312)
Q Consensus         1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~   78 (312)
                      ++|+++|.+++|++..++ ++|.   ++      .+.+.......+||.+.|+|.+|++||.++.++|.+|+|  ++.++
T Consensus        16 ~~vlviG~~~vD~~~~~~-~~~~---~~------~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~vG~D~~g~~i~   85 (326)
T PTZ00292         16 PDVVVVGSSNTDLIGYVD-RMPQ---VG------ETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTI   85 (326)
T ss_pred             CCEEEEccceeeEEEecC-CCCC---CC------CceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEEECCChhHHHHH
Confidence            479999999999999998 7654   22      234455667889999999999999999999999999999  78899


Q ss_pred             HHHHHcCCccceeeecCCcccceEEEEEe-cCCCeeEEEeCCccccCCccccCC----cCC-ceEEEECCCC-hHHHHHH
Q psy8856          79 KHLKYLGISNKYIQKINSMFTAQCFIVTD-VNNNQITIFHPGAMQLSYDDNCIN----NAD-IKIAIISPDN-CCNMIKH  151 (312)
Q Consensus        79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~-~~~~~~~  151 (312)
                      +.|++.||+++++...++.+|+++++.++ .++++.+..++++...++++.+..    +.. +++++++... .+...++
T Consensus        86 ~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  165 (326)
T PTZ00292         86 KNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDAQTDNIQNICKYLICQNEIPLETTLDA  165 (326)
T ss_pred             HHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHHHHHHhhhhCCEEEECCCCCHHHHHHH
Confidence            99999999999997777778999999988 778888877777666666655432    445 7888887543 4777888


Q ss_pred             HHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHH-------HHhh-cCCEEEEeeCCC
Q psy8856         152 IKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQ-------KINE-QVKVLIVTRGEL  223 (312)
Q Consensus       152 ~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~-------~l~~-g~~~vvvt~G~~  223 (312)
                      ++.++++++++++|++++...|..+.+.++++++|++++|++|++.+++....+.+       .+.+ +++.++||+|++
T Consensus       166 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~  245 (326)
T PTZ00292        166 LKEAKERGCYTVFNPAPAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIITLGAN  245 (326)
T ss_pred             HHHHHHcCCEEEEECCCCccccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            99999999999999987665555567889999999999999999999886432221       2222 889999999999


Q ss_pred             ceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHH
Q psy8856         224 GSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRF  303 (312)
Q Consensus       224 G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~  303 (312)
                      |++++++++..+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|++++++.|+..+.|+.+++++.+
T Consensus       246 Ga~~~~~~~~~~~~~~~~~~-vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~Aa~~v~~~G~~~~~~~~~~~~~~~  324 (326)
T PTZ00292        246 GCLIVEKENEPVHVPGKRVK-AVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSSYPHPSELPADV  324 (326)
T ss_pred             cEEEEeCCCceEEccCCccc-cCCCcchHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHh
Confidence            99998872345899999886 99999999999999999999999999999999999999999999987789999998765


Q ss_pred             H
Q psy8856         304 K  304 (312)
Q Consensus       304 ~  304 (312)
                      +
T Consensus       325 ~  325 (326)
T PTZ00292        325 K  325 (326)
T ss_pred             c
Confidence            4

>PRK11142 ribokinase; Provisional Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>KOG2855|consensus Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>KOG2854|consensus Back     alignment and domain information
>KOG2947|consensus Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>KOG3009|consensus Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>KOG2598|consensus Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>KOG2599|consensus Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information
>PRK14038 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>KOG3974|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
3b1n_A326 Structure Of Burkholderia Thailandensis Nucleoside 4e-79
3b1r_A320 Structure Of Burkholderia Thailandensis Nucleoside 5e-79
2pkf_A334 Crystal Structure Of M Tuberculosis Adenosine Kinas 4e-31
2c49_A302 Crystal Structure Of Methanocaldococcus Jannaschii 3e-27
3bf5_A306 Crystal Structure Of Putative Ribokinase (10640157) 7e-07
3hj6_A327 Structure Of Halothermothrix Orenii Fructokinase (F 2e-04
1v19_A309 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop 4e-04
>pdb|3B1N|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Adp-Mizoribine Length = 326 Back     alignment and structure 
Iteration: 1

 Score =  291 bits (744), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 192/311 (61%), Gaps = 2/311 (0%)
Query: 1   MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
           M +LICGS+A+DNIM FEG+F   +LPDQ+  IN+SF  PTM++E+GGCAGNIAY L LL
Sbjct: 1   MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLL 60
Query: 61  NGNPLIVSILGK-DGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPG 119
            G+  ++  LG  D   YL  +  LG+S +Y++ +   ++AQ  I TD++NNQIT FHPG
Sbjct: 61  GGDARMMGTLGAVDAQPYLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPG 120
Query: 120 AMQLSYDDNCINNADIKIAIISPDNCCNMXXXXXXXXXXXXXXXXDPGQSLSMFTKEELX 179
           AM  S+ ++     DIK+AI+ PD    M                DPGQ L +F    L 
Sbjct: 121 AMMQSHVNHAGEAKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGLPLFDGATLR 180
Query: 180 XXXXXXXXXXVNEYEXXXXXXXXXXXXXXINEQVKVLIVTRGELGSDIFLNNERKIKIPC 239
                     VN+YE              I  +V+ LI+TRGE G+ I  + +   +IP 
Sbjct: 181 RSIELATYIAVNDYEAKLVCDKTGWSEDEIASRVQALIITRGEHGATI-RHRDGTEQIPA 239
Query: 240 VKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEI 299
           V+A+R++DPTGCGDAFR G+L+GI +  DW T GRL+SLMG+ +I+HQG Q + P+ +EI
Sbjct: 240 VRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAEI 299
Query: 300 DQRFKEAFGYR 310
           D RF+ AFGYR
Sbjct: 300 DARFETAFGYR 310
>pdb|3B1R|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Amp-Mg-Amp Length = 320 Back     alignment and structure
>pdb|2PKF|A Chain A, Crystal Structure Of M Tuberculosis Adenosine Kinase (Apo) Length = 334 Back     alignment and structure
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 Back     alignment and structure
>pdb|3BF5|A Chain A, Crystal Structure Of Putative Ribokinase (10640157) From Thermoplasma Acidophilum At 1.91 A Resolution Length = 306 Back     alignment and structure
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 Back     alignment and structure
>pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 1e-114
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 1e-113
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 1e-100
3bf5_A306 Ribokinase related protein; 10640157, putative rib 2e-88
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 5e-66
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 1e-33
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 8e-29
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 8e-27
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 1e-26
4e3a_A352 Sugar kinase protein; structural genomics, protein 1e-24
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 3e-24
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 3e-23
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 3e-23
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 4e-23
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 4e-21
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 9e-21
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 1e-20
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 5e-20
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 2e-19
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 2e-19
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 1e-18
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 1e-18
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 2e-18
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 2e-18
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 1e-17
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 4e-17
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 5e-17
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 1e-14
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 2e-14
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 9e-14
2fv7_A331 Ribokinase; structural genomics, structural genomi 1e-13
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 2e-13
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 1e-12
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 6e-12
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 6e-12
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 1e-11
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 8e-11
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 1e-09
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 2e-04
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
 Score =  331 bits (851), Expect = e-114
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 4/312 (1%)

Query: 1   MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
           M   + GS+A D++MRF G+FS  LLP+ L K+++SF    +    GG AGN+A+ + +L
Sbjct: 11  MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVL 70

Query: 61  NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
            G   +V   G D + Y   LK  G++  ++    +  TA+    TDV+  QI  F+PGA
Sbjct: 71  GGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGA 130

Query: 121 MQLSY----DDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKE 176
           M  +      D        ++ II  ++   M  H ++  KL + F  DP Q L+  + E
Sbjct: 131 MSEARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARLSGE 190

Query: 177 ELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIK 236
           E+ +++  ++Y+  N+YE  LL+SKT  S   +  Q+ + + T G  G D+   +   I 
Sbjct: 191 EIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGTTIH 250

Query: 237 IPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSL 296
           +  V      DPTG GDAFR+G L G    L    + +L SL+    +   G Q+     
Sbjct: 251 VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDY 310

Query: 297 SEIDQRFKEAFG 308
                R   A+G
Sbjct: 311 EAAASRLAGAYG 322
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 100.0
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 100.0
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 100.0
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 100.0
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 100.0
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 100.0
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 100.0
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 100.0
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 100.0
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 100.0
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 100.0
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 100.0
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 100.0
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 100.0
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 100.0
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 100.0
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 100.0
3bf5_A306 Ribokinase related protein; 10640157, putative rib 100.0
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 100.0
2fv7_A331 Ribokinase; structural genomics, structural genomi 100.0
4e3a_A352 Sugar kinase protein; structural genomics, protein 100.0
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 100.0
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 100.0
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 100.0
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 100.0
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 100.0
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 100.0
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 100.0
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 100.0
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 100.0
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 100.0
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 100.0
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 100.0
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 100.0
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 100.0
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 100.0
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 100.0
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 100.0
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 100.0
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 100.0
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 100.0
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 100.0
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 100.0
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 100.0
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 100.0
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 100.0
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 100.0
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 100.0
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 100.0
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 100.0
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.88
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.87
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.83
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.83
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.81
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 99.75
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 99.74
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 99.7
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 99.65
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.49
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 99.46
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 98.97
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 98.73
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 98.72
2r3b_A310 YJEF-related protein; putative kinase in the ribok 98.7
3rss_A502 Putative uncharacterized protein; unknown function 98.63
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 98.62
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 98.11
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 98.06
1ua4_A455 Glucokinase, ADP-dependent glucokinase; transferas 97.97
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 97.86
1gc5_A467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 97.57
1l2l_A457 ADP-dependent glucokinase; ADP glucokinase APO, tr 97.42
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 97.35
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
Probab=100.00  E-value=7e-50  Score=355.43  Aligned_cols=308  Identities=50%  Similarity=0.907  Sum_probs=263.6

Q ss_pred             CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeec-C-hHHHH
Q psy8856           1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGK-D-GSSYL   78 (312)
Q Consensus         1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~-d-~~~i~   78 (312)
                      |+|+++|++++|++..+++.+-+.+.++..+..+.+.........+||++.|+|.+|++||.++.++|.+|+ | +. ++
T Consensus         1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D~g~-i~   79 (326)
T 3b1n_A            1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVDAQP-YL   79 (326)
T ss_dssp             -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTTCHH-HH
T ss_pred             CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcCHHH-HH
Confidence            899999999999999883232222233444455666666777889999999999999999999999999999 9 77 99


Q ss_pred             HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCChHHHHHHHHHHHhc
Q psy8856          79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKL  158 (312)
Q Consensus        79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (312)
                      +.|++.||+++++.+.++.+|+.+++.+++++++.+.+.+++...+..+++...+.++++++++..++.+.++++.+++.
T Consensus        80 ~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~  159 (326)
T 3b1n_A           80 DRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEAKDIKLAIVGPDGFQGMVQHTEELAQA  159 (326)
T ss_dssp             HHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGCCSCSEEEECSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccccCCCEEEECCccHHHHHHHHHHHHHC
Confidence            99999999999988877778999999999888887766766655555555444468899999998888889999999989


Q ss_pred             CCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCceEEcC
Q psy8856         159 KIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIP  238 (312)
Q Consensus       159 ~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~  238 (312)
                      +.++++||+.+...|..+.+.++++++|++++|++|++.+++....+.+++.++++.++||+|++|++++++ ++.+++|
T Consensus       160 g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~l~~~~~~vvvT~G~~Ga~~~~~-~~~~~~~  238 (326)
T 3b1n_A          160 GVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGWSEDEIASRVQALIITRGEHGATIRHR-DGTEQIP  238 (326)
T ss_dssp             TCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHHHHHTTSSEEEEECGGGCEEEEET-TEEEEEC
T ss_pred             CCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHHHHHhcCCEEEEecCCCceEEEEC-CcEEEeC
Confidence            999999999877677778888999999999999999999987654456777778999999999999999988 8888999


Q ss_pred             CcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHhhccc
Q psy8856         239 CVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYR  310 (312)
Q Consensus       239 ~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~~~~  310 (312)
                      ++++++++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+....|+.+|+++++++.+++.
T Consensus       239 ~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~ev~~~l~~~~~~~  310 (326)
T 3b1n_A          239 AVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAEIDARFETAFGYR  310 (326)
T ss_dssp             CCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSTTCCCCCHHHHHHHHHHHHSSC
T ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCc
Confidence            998864689999999999999999999999999999999999999999999877899999999999876653
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 312
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 7e-23
d1vk4a_288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 7e-23
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 9e-22
d1vm7a_299 c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax 1e-19
d2fv7a1308 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien 2e-19
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 8e-19
d2absa1350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 2e-18
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 3e-17
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 1e-15
d2f02a1313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 4e-15
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 7e-15
d1bx4a_342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 6e-14
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 1e-13
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Escherichia coli [TaxId: 562]

 Score = 94.5 bits (233), Expect = 7e-23
 Identities = 46/314 (14%), Positives = 92/314 (29%), Gaps = 26/314 (8%)

Query: 4   LICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGN 63
           ++ GS+  D+I+  +        P   + +  +      +  +GG   N A        N
Sbjct: 5   VVLGSINADHILNLQS------FPTPGETVTGN----HYQVAFGGKGANQAVAAGRSGAN 54

Query: 64  PLIVSILGKDGSSYLK---HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
              ++  G D                                  V     N I I     
Sbjct: 55  IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGAN 114

Query: 121 MQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIK 180
             LS          I  A        + ++ +    K+          + +   +E   +
Sbjct: 115 AALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPA-RELPDE 173

Query: 181 IIKKSSYIIVNEYESKLLV--------SKTSLSLQKINEQVKVLIVTRGELGSDIFLNNE 232
           ++     I  NE E++ L              +     + ++ +++T G  G    +N E
Sbjct: 174 LLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGE 233

Query: 233 R-KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQK 291
             ++    V+A   VD    GD F   ++  ++         R +    +  ++ +G Q 
Sbjct: 234 GQRVPGFRVQA---VDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQP 290

Query: 292 HCPSLSEIDQRFKE 305
             P   EID     
Sbjct: 291 SVPWREEIDAFLDR 304
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 Back     information, alignment and structure
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 100.0
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 100.0
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 100.0
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 100.0
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 100.0
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 100.0
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 100.0
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 100.0
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 100.0
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 100.0
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 100.0
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 99.55
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.31
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 99.19
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.18
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 98.42
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 98.29
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 98.19
d1u2xa_450 ADP-specific phosphofructokinase {Pyrococcus horik 97.57
d1gc5a_467 ADP-dependent glucokinase {Archaeon Thermococcus l 97.3
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 97.28
d1ua4a_454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 97.02
d1l2la_451 ADP-dependent glucokinase {Archaeon Thermococcus l 96.91
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-41  Score=294.91  Aligned_cols=284  Identities=17%  Similarity=0.212  Sum_probs=228.7

Q ss_pred             CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856           1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL   78 (312)
Q Consensus         1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~   78 (312)
                      |||+++|++++|.+...++..               .........+||.+.|+|.+|++||.++.++|.+|+|  |+.++
T Consensus         2 ~~i~viG~~~vD~~~~~~~~~---------------~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~~~~iG~D~~g~~i~   66 (302)
T d1v19a_           2 LEVVTAGEPLVALVPQEPGHL---------------RGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVE   66 (302)
T ss_dssp             CSEEEESCCEEEEEESSSSCG---------------GGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHH
T ss_pred             CeEEEECcceEEEecCCCCce---------------eecceEEEecCcHHHHHHHHHHHcCCCEEEEEEEcCCcccccch
Confidence            799999999999875444222               1223456789999999999999999999999999999  88999


Q ss_pred             HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCc--cccCCccccC--CcCCceEEEECCCC-------hHH
Q psy8856          79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA--MQLSYDDNCI--NNADIKIAIISPDN-------CCN  147 (312)
Q Consensus        79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~  147 (312)
                      +.|+++||++.++...+. .++.+++.+..++++.+......  ...+......  .++.+++++++...       .+.
T Consensus        67 ~~l~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  145 (302)
T d1v19a_          67 ERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAF  145 (302)
T ss_dssp             HHHHHHTCBCTTEEEESS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETHHHHHCHHHHHH
T ss_pred             hhhhhcccccchhccccc-cccccchhhccccccccccccccccchhhccccccHHHHhcccEEeeeccccccchhHHHH
Confidence            999999999998877664 66777777887777766654322  2222332222  25677788776432       255


Q ss_pred             HHHHHHHHHhcCCcEEEcCCCCcccCCH----HHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCC
Q psy8856         148 MIKHIKKILKLKIPFIFDPGQSLSMFTK----EELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGEL  223 (312)
Q Consensus       148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~----~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~  223 (312)
                      ...+++..++.+..+.+|++.....+..    +.+...++.+|+++.|++|++.+.+..  .......+.+.++||+|.+
T Consensus       146 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~--~~~~~~~~~~~viit~G~~  223 (302)
T d1v19a_         146 SLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV--EEALRALSAPEVVLKRGAK  223 (302)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSST--THHHHHTCCSEEEEECTTS
T ss_pred             HHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhhhccchhhhhhhhhhhhhhh--hhhhhhccceEEEEecCCC
Confidence            6677888899999999999876655543    335667889999999999999887653  1222234889999999999


Q ss_pred             ceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHH
Q psy8856         224 GSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRF  303 (312)
Q Consensus       224 G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~  303 (312)
                      |++++++ ++.+++|+++++ ++||+||||+|+|||+|++++|+++++|+++|+++||.++++.|+.+++|+++|+++++
T Consensus       224 G~~~~~~-~~~~~~p~~~v~-vvDttGAGDaf~a~~~~~~~~g~~~~~a~~~a~~~Aa~~v~~~G~~~~~p~~~~i~~~l  301 (302)
T d1v19a_         224 GAWAFVD-GRRVEGSAFAVE-AVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL  301 (302)
T ss_dssp             CEEEEET-TEEEECCCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHCC
T ss_pred             CCccccc-cccccccccccc-cCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Confidence            9999999 999999999997 99999999999999999999999999999999999999999999999899999999876


Q ss_pred             H
Q psy8856         304 K  304 (312)
Q Consensus       304 ~  304 (312)
                      +
T Consensus       302 ~  302 (302)
T d1v19a_         302 K  302 (302)
T ss_dssp             -
T ss_pred             C
Confidence            4
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure