Psyllid ID: psy9103


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
MKIRHSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQGAIPSLSRLISGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGWFKI
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
mkirhsqgaipslkpelpnqagatnsqgalpglkpelpnqarttnsqgaipslkpelpnqagatnsqgaipslkpelpnqagatnsqgaipslkpelpnqagatnsqgaipslkpelpnqagatnsqgalpglkpelpnqaratnsqgaipslkpelpnqaratnsqgaipslrpelpnqagatnsqgaipslsrlisgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgwfki
mkirhsqgaipslkpelpnQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQGAIPSLSRLISGSYTepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgttksgknykqsgsytepqtgwfki
MKIRHSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQGAIPSLSRLISGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGWFKI
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
********AIPSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQGAIPSLSRLISGSY*******************************************************************************************************************************************************************************************************************************************QSGSYTEPQTGWFKI
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
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MKIRHSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQGAIPSLSRLISGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGWFKI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query451 2.2.26 [Sep-21-2011]
P15941 1255 Mucin-1 OS=Homo sapiens G yes N/A 0.563 0.202 0.258 1e-11
P02674 966 Fibrinogen alpha-1 chain N/A N/A 0.501 0.233 0.356 4e-09
>sp|P15941|MUC1_HUMAN Mucin-1 OS=Homo sapiens GN=MUC1 PE=1 SV=3 Back     alignment and function desciption
 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 80/255 (31%)

Query: 193 LSRLISGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSG 252
           ++R   GS T P    T +  N    GS   P  G T +       GS   P  G T + 
Sbjct: 103 VTRPALGSTTPPAHDVTSAPDNKPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAP 162

Query: 253 KNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSG 312
                 GS   P  G T +       GS   P  G T +       GS   P  G T + 
Sbjct: 163 DTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAP 222

Query: 313 KNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSG 372
                 GS   P  G T +       GS   P  G T +       GS   P  G T + 
Sbjct: 223 DTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAP 282

Query: 373 KNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSG 432
                 GS   P  G T +       GS   P  G T +       GS   P  G T + 
Sbjct: 283 DTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAP 342

Query: 433 KNYKQSGSYTEPQTG 447
                 GS   P  G
Sbjct: 343 DTRPAPGSTAPPAHG 357




The beta subunit contains a C-terminal domain which is involved in cell signaling, through phosphorylations and protein-protein interactions. Modulates signaling in ERK, SRC and NF-kappa-B pathways. In activated T-cells, influences directly or indirectly the Ras/MAPK pathway. Promotes tumor progression. Regulates TP53-mediated transcription and determines cell fate in the genotoxic stress response. Binds, together with KLF4, the PE21 promoter element of TP53 and represses TP53 activity.
Homo sapiens (taxid: 9606)
>sp|P02674|FIBA1_PETMA Fibrinogen alpha-1 chain (Fragment) OS=Petromyzon marinus PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
384183473 985 hypothetical protein YBT020_28294 [Bacil 0.547 0.250 0.404 9e-22
270017226301 hypothetical protein TcasGA2_TC005028 [T 0.310 0.465 0.319 4e-20
270009535477 hypothetical protein TcasGA2_TC008809 [T 0.297 0.280 0.326 8e-20
168058694 1842 predicted protein [Physcomitrella patens 0.518 0.127 0.254 4e-12
407703088 894 conjugative transposon membrane protein 0.470 0.237 0.358 8e-12
301632502331 PREDICTED: hypothetical protein LOC10049 0.587 0.800 0.239 1e-11
344255385412 hypothetical protein I79_024820 [Cricetu 0.532 0.582 0.33 5e-11
189599 1255 mucin [Homo sapiens] 0.563 0.202 0.258 6e-10
296439295 1255 RecName: Full=Mucin-1; Short=MUC-1; AltN 0.563 0.202 0.258 7e-10
322376654 2162 IgA-specific serine endopeptidase [Strep 0.689 0.143 0.268 4e-09
>gi|384183473|ref|YP_005569234.1| hypothetical protein YBT020_28294 [Bacillus thuringiensis serovar finitimus YBT-020] gi|324323771|gb|ADY24815.1| hypothetical protein YBT020_28294 [Bacillus thuringiensis serovar finitimus YBT-020] Back     alignment and taxonomy information
 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 125/247 (50%)

Query: 201 YTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGS 260
            T PQ+GTT    N  +S   T PQ+GTT    N  +S   T PQ+GTT    N  +S  
Sbjct: 639 VTTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKP 698

Query: 261 YTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGS 320
            T PQ+GTT    N  +S   T PQ+GTT    N  +S   T PQ+GTT    N  +S  
Sbjct: 699 ITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKP 758

Query: 321 YTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGS 380
            T PQ+GTT    N  +S   T PQ+GTT    N  +S   T PQ+GTT    N  +S  
Sbjct: 759 ITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKP 818

Query: 381 YTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGS 440
            T PQ+GTT    N  +S   T PQ+GTT    N  +S   T PQ+GTT    N  +S  
Sbjct: 819 ITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPMESKPITTPQSGTTPLQSNPIESKP 878

Query: 441 YTEPQTG 447
            T PQ+G
Sbjct: 879 ITAPQSG 885




Source: Bacillus thuringiensis serovar finitimus YBT-020

Species: Bacillus thuringiensis

Genus: Bacillus

Family: Bacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|270017226|gb|EFA13672.1| hypothetical protein TcasGA2_TC005028 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270009535|gb|EFA05983.1| hypothetical protein TcasGA2_TC008809 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|168058694|ref|XP_001781342.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667235|gb|EDQ53870.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|407703088|ref|YP_006816236.1| conjugative transposon membrane protein [Bacillus thuringiensis MC28] gi|407387503|gb|AFU17997.1| conjugative transposon membrane protein [Bacillus thuringiensis MC28] Back     alignment and taxonomy information
>gi|301632502|ref|XP_002945324.1| PREDICTED: hypothetical protein LOC100490069, partial [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|344255385|gb|EGW11489.1| hypothetical protein I79_024820 [Cricetulus griseus] Back     alignment and taxonomy information
>gi|189599|gb|AAA60019.1| mucin [Homo sapiens] Back     alignment and taxonomy information
>gi|296439295|sp|P15941.3|MUC1_HUMAN RecName: Full=Mucin-1; Short=MUC-1; AltName: Full=Breast carcinoma-associated antigen DF3; AltName: Full=Cancer antigen 15-3; Short=CA 15-3; AltName: Full=Carcinoma-associated mucin; AltName: Full=Episialin; AltName: Full=H23AG; AltName: Full=Krebs von den Lungen-6; Short=KL-6; AltName: Full=PEMT; AltName: Full=Peanut-reactive urinary mucin; Short=PUM; AltName: Full=Polymorphic epithelial mucin; Short=PEM; AltName: Full=Tumor-associated epithelial membrane antigen; Short=EMA; AltName: Full=Tumor-associated mucin; AltName: CD_antigen=CD227; Contains: RecName: Full=Mucin-1 subunit alpha; Short=MUC1-NT; Short=MUC1-alpha; Contains: RecName: Full=Mucin-1 subunit beta; Short=MUC1-beta; AltName: Full=MUC1-CT; Flags: Precursor Back     alignment and taxonomy information
>gi|322376654|ref|ZP_08051147.1| IgA-specific serine endopeptidase [Streptococcus sp. M334] gi|321282461|gb|EFX59468.1| IgA-specific serine endopeptidase [Streptococcus sp. M334] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
FB|FBgn0038642950 Muc91C "Mucin 91C" [Drosophila 0.929 0.441 0.279 9.3e-21
UNIPROTKB|P15941 1255 MUC1 "Mucin-1" [Homo sapiens ( 0.971 0.349 0.216 1.2e-19
FB|FBgn0036203 1514 Muc68D "Mucin 68D" [Drosophila 0.933 0.278 0.215 7.2e-15
SGD|S000005134204 YNL190W "Hydrophilin essential 0.303 0.671 0.460 2.4e-14
UNIPROTKB|Q04118309 PRB3 "Basic salivary proline-r 0.439 0.640 0.384 3e-14
DICTYBASE|DDB_G0268640784 DDB_G0268640 "unknown" [Dictyo 0.929 0.534 0.229 4.8e-14
UNIPROTKB|P10163310 PRB4 "Basic salivary proline-r 0.445 0.648 0.361 5.5e-14
CGD|CAL0004905 1086 IFF6 [Candida albicans (taxid: 0.915 0.380 0.238 7.7e-14
UNIPROTKB|Q59XL0 1086 IFF6 "Putative uncharacterized 0.915 0.380 0.238 7.7e-14
DICTYBASE|DDB_G0271916367 rtoA "unknown" [Dictyostelium 0.552 0.678 0.277 8.4e-14
FB|FBgn0038642 Muc91C "Mucin 91C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 274 (101.5 bits), Expect = 9.3e-21, P = 9.3e-21
 Identities = 131/468 (27%), Positives = 199/468 (42%)

Query:    11 PSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQGAI 70
             P   P  P+ +     Q  +    P     ++ ++S GA PS+   +P  +  + + GA 
Sbjct:   456 PKPAPAPPSSSYGAPPQAPVSSYLPPASRPSKPSSSYGA-PSVSSFVPLPSAPSTNYGA- 513

Query:    71 PSLKPELPNQ---AGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQ 127
             PS    L +    +G ++S  A P   P     A +++ Q   P         +G+ +S 
Sbjct:   514 PSKTQSLGSSGYSSGPSSSYEA-PVAPPSSSYGAPSSSFQPISPPSSSYGAPSSGSGSSS 572

Query:   128 G---ALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGAT 184
             G   A P      P++  +  S  + PS     P+ +   NS G+ PS  P     A ++
Sbjct:   573 GSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSAS--ANSGGSYPSA-PSSSYSAPSS 629

Query:   185 NSQGAIPSLSRLISGSYTEPQTGTTKSGKNYKQ--SGSYTEPQTGTTKSGKNYKQ--SGS 240
             +S    P  S   S SY+ P +G+  SG  Y    S SY+ P + +  SG +Y    S S
Sbjct:   630 SSSSGGPYASAP-SSSYSAPSSGSN-SGGPYPAAPSSSYSAP-SASANSGGSYPSAPSSS 686

Query:   241 YTEPQTGTTKSGKNYKQ--SGSYTEPQTGTTKSGKNYKQ--SGSYTEPQTGTTKSGKNYK 296
             Y+ P  G+  SG  Y    S SY+ P   +  SG  Y    S SY+ P + ++ SG  Y 
Sbjct:   687 YSAPSPGSN-SGGPYPAAPSSSYSAPSP-SANSGGPYASAPSSSYSAPSS-SSNSGGPYA 743

Query:   297 Q--SGSYTEPQTGTTKSGKNYKQ--SGSYTEPQTGTTKSGKNYKQ--SGSYTEPQTGTTK 350
                S SY+ P + ++ SG  Y    S SY+ P +  + SG  Y    S SY  P   ++ 
Sbjct:   744 AAPSSSYSAPSSSSS-SGGPYPSAPSSSYSAPSSSLS-SGGPYPSAPSSSYAAPSP-SSN 800

Query:   351 SGKNYKQ--SGSYTEP------QTGTTKSGKNYK---QSGSYTEPQTGTTKSGKNYKQSG 399
             SG  Y    S SY+ P        G   SG +      S SY  P TG+  S  ++  S 
Sbjct:   801 SGGPYPAAPSNSYSAPIAPPSSSYGAPASGPSPSFSAPSSSYGAPSTGSGSS--SFSSSS 858

Query:   400 SYTEPQTGTTKSGKNYKQSGSYTEPQTGTTKSGKNYKQSGSYTEPQTG 447
             S     + ++ +G     S SY  P TG+  S  +   S SY+ P  G
Sbjct:   859 SSFSGASSSSSAGYPSAPSSSYGAPSTGSGHSFSS-APSSSYSAPPAG 905


GO:0005201 "extracellular matrix structural constituent" evidence=ISM
GO:0031012 "extracellular matrix" evidence=ISM
GO:0022008 "neurogenesis" evidence=IMP
UNIPROTKB|P15941 MUC1 "Mucin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0036203 Muc68D "Mucin 68D" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
SGD|S000005134 YNL190W "Hydrophilin essential in dessication-rehydration process" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q04118 PRB3 "Basic salivary proline-rich protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268640 DDB_G0268640 "unknown" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P10163 PRB4 "Basic salivary proline-rich protein 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
CGD|CAL0004905 IFF6 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59XL0 IFF6 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271916 rtoA "unknown" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query451
PRK15387 788 PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss 6e-07
PRK15387 788 PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss 7e-06
PRK15387788 PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss 0.001
PRK15387788 PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss 0.003
>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information
 Score = 51.7 bits (123), Expect = 6e-07
 Identities = 47/185 (25%), Positives = 78/185 (42%)

Query: 9   AIPSLKPELPNQAGATNSQGALPGLKPELPNQARTTNSQGAIPSLKPELPNQAGATNSQG 68
           ++P+L PEL     + N   +LP L P L   +  +N    +P+L   L       N   
Sbjct: 236 SLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLT 295

Query: 69  AIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQGAIPSLKPELPNQAGATNSQG 128
           ++P L P L   + + N   ++P+L  EL       N   ++P+L   L   + + N   
Sbjct: 296 SLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA 355

Query: 129 ALPGLKPELPNQARATNSQGAIPSLKPELPNQARATNSQGAIPSLRPELPNQAGATNSQG 188
           +LP L  EL       N   ++P+L   L     + N   ++P L  EL     + N   
Sbjct: 356 SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLT 415

Query: 189 AIPSL 193
           ++P L
Sbjct: 416 SLPML 420


Length = 788

>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information
>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information
>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00