Psyllid ID: psy9197
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 154 | ||||||
| 242015997 | 455 | E3 ubiquitin-protein ligase CBL, putativ | 1.0 | 0.338 | 0.909 | 5e-79 | |
| 345494813 | 752 | PREDICTED: E3 ubiquitin-protein ligase C | 1.0 | 0.204 | 0.876 | 3e-76 | |
| 198466714 | 889 | GA20050 [Drosophila pseudoobscura pseudo | 0.974 | 0.168 | 0.86 | 2e-75 | |
| 322803104 | 197 | hypothetical protein SINV_12210 [Solenop | 0.993 | 0.776 | 0.869 | 2e-75 | |
| 24660927 | 878 | Cbl, isoform B [Drosophila melanogaster] | 0.974 | 0.170 | 0.86 | 2e-75 | |
| 195442394 | 947 | GK18041 [Drosophila willistoni] gi|19416 | 0.974 | 0.158 | 0.866 | 3e-75 | |
| 195491193 | 886 | GE20742 [Drosophila yakuba] gi|194179558 | 0.974 | 0.169 | 0.86 | 3e-75 | |
| 194748711 | 856 | GF24399 [Drosophila ananassae] gi|190624 | 0.974 | 0.175 | 0.86 | 3e-75 | |
| 194865894 | 873 | GG14313 [Drosophila erecta] gi|190653439 | 0.974 | 0.171 | 0.86 | 4e-75 | |
| 195125561 | 911 | GI12833 [Drosophila mojavensis] gi|19391 | 0.974 | 0.164 | 0.86 | 7e-75 |
| >gi|242015997|ref|XP_002428625.1| E3 ubiquitin-protein ligase CBL, putative [Pediculus humanus corporis] gi|212513288|gb|EEB15887.1| E3 ubiquitin-protein ligase CBL, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 140/154 (90%), Positives = 151/154 (98%)
Query: 1 MAPPKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYE 60
MAPPK+ATDKRTLDKTWKLMDKVVKLCQH KMNLKNSPPF+LDILPDTYQRL+LIYTKYE
Sbjct: 31 MAPPKVATDKRTLDKTWKLMDKVVKLCQHQKMNLKNSPPFILDILPDTYQRLRLIYTKYE 90
Query: 61 DKMIVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLS 120
DKM VLH+NE FNVFIVNLMRKCKQAIKLFKEGKEKM+DE+SHYRRNLTKLSLVFSHMLS
Sbjct: 91 DKMTVLHSNEHFNVFIVNLMRKCKQAIKLFKEGKEKMFDENSHYRRNLTKLSLVFSHMLS 150
Query: 121 ELKAIFPNGVFAGDQFRITKSDAADFWRNNFGNA 154
ELKAIFPNG+FAGDQFRITKSDAA+FW++NFGN+
Sbjct: 151 ELKAIFPNGLFAGDQFRITKSDAAEFWKSNFGNS 184
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345494813|ref|XP_001603405.2| PREDICTED: E3 ubiquitin-protein ligase CBL-B-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|198466714|ref|XP_001354110.2| GA20050 [Drosophila pseudoobscura pseudoobscura] gi|198150726|gb|EAL29849.2| GA20050 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
| >gi|322803104|gb|EFZ23192.1| hypothetical protein SINV_12210 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|24660927|ref|NP_648224.1| Cbl, isoform B [Drosophila melanogaster] gi|9857989|gb|AAG00952.1|AF273749_1 Cbl long isoform [Drosophila melanogaster] gi|23093909|gb|AAF50416.2| Cbl, isoform B [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|195442394|ref|XP_002068943.1| GK18041 [Drosophila willistoni] gi|194165028|gb|EDW79929.1| GK18041 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
| >gi|195491193|ref|XP_002093457.1| GE20742 [Drosophila yakuba] gi|194179558|gb|EDW93169.1| GE20742 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
| >gi|194748711|ref|XP_001956788.1| GF24399 [Drosophila ananassae] gi|190624070|gb|EDV39594.1| GF24399 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|194865894|ref|XP_001971656.1| GG14313 [Drosophila erecta] gi|190653439|gb|EDV50682.1| GG14313 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|195125561|ref|XP_002007246.1| GI12833 [Drosophila mojavensis] gi|193918855|gb|EDW17722.1| GI12833 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 154 | ||||||
| FB|FBgn0020224 | 878 | Cbl "Cbl" [Drosophila melanoga | 0.974 | 0.170 | 0.86 | 1.3e-68 | |
| UNIPROTKB|B5MC15 | 810 | CBLB "Cas-Br-M (Murine) ecotro | 0.993 | 0.188 | 0.666 | 1.7e-54 | |
| UNIPROTKB|F1NL77 | 991 | CBLB "Uncharacterized protein" | 0.993 | 0.154 | 0.673 | 3.2e-54 | |
| RGD|620535 | 938 | Cblb "Cbl proto-oncogene, E3 u | 0.993 | 0.163 | 0.666 | 6.6e-54 | |
| UNIPROTKB|Q8K4S7 | 938 | Cblb "E3 ubiquitin-protein lig | 0.993 | 0.163 | 0.666 | 6.6e-54 | |
| UNIPROTKB|E7ENW2 | 960 | CBLB "E3 ubiquitin-protein lig | 0.993 | 0.159 | 0.666 | 7.4e-54 | |
| UNIPROTKB|Q13191 | 982 | CBLB "E3 ubiquitin-protein lig | 0.993 | 0.155 | 0.666 | 8.2e-54 | |
| MGI|MGI:2146430 | 982 | Cblb "Casitas B-lineage lympho | 0.993 | 0.155 | 0.666 | 8.2e-54 | |
| UNIPROTKB|F1N510 | 983 | CBLB "Uncharacterized protein" | 0.993 | 0.155 | 0.666 | 8.3e-54 | |
| UNIPROTKB|E2RM91 | 983 | CBLB "Uncharacterized protein" | 0.993 | 0.155 | 0.666 | 8.3e-54 |
| FB|FBgn0020224 Cbl "Cbl" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 129/150 (86%), Positives = 144/150 (96%)
Query: 5 KLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMI 64
+L+TDK+TL+KTWKLMDKVVKLCQ PKMNLKNSPPF+LDILPDTYQRL+LIY+K ED+M
Sbjct: 36 RLSTDKKTLEKTWKLMDKVVKLCQQPKMNLKNSPPFILDILPDTYQRLRLIYSKNEDQMH 95
Query: 65 VLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKA 124
+LH NE FNVFI NLMRKCKQAIKLFKEGKEKM+DE+SHYRRNLTKLSLVFSHMLSELKA
Sbjct: 96 LLHANEHFNVFINNLMRKCKQAIKLFKEGKEKMFDENSHYRRNLTKLSLVFSHMLSELKA 155
Query: 125 IFPNGVFAGDQFRITKSDAADFWRNNFGNA 154
IFPNGVFAGDQFRITK+DAADFW++NFGN+
Sbjct: 156 IFPNGVFAGDQFRITKADAADFWKSNFGNS 185
|
|
| UNIPROTKB|B5MC15 CBLB "Cas-Br-M (Murine) ecotropic retroviral transforming sequence b, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NL77 CBLB "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|620535 Cblb "Cbl proto-oncogene, E3 ubiquitin protein ligase B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8K4S7 Cblb "E3 ubiquitin-protein ligase CBL-B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E7ENW2 CBLB "E3 ubiquitin-protein ligase CBL-B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q13191 CBLB "E3 ubiquitin-protein ligase CBL-B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2146430 Cblb "Casitas B-lineage lymphoma b" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N510 CBLB "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RM91 CBLB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 154 | |||
| pfam02262 | 130 | pfam02262, Cbl_N, CBL proto-oncogene N-terminal do | 3e-75 | |
| pfam02761 | 85 | pfam02761, Cbl_N2, CBL proto-oncogene N-terminus, | 0.001 |
| >gnl|CDD|111184 pfam02262, Cbl_N, CBL proto-oncogene N-terminal domain 1 | Back alignment and domain information |
|---|
Score = 220 bits (561), Expect = 3e-75
Identities = 92/130 (70%), Positives = 107/130 (82%)
Query: 4 PKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKM 63
DK+ L+K WKLMDKVVKLCQ PK+NLKNSPPF+LDILPDTYQ L+LI+++ EDKM
Sbjct: 1 FCSEEDKKFLEKAWKLMDKVVKLCQSPKLNLKNSPPFILDILPDTYQHLRLIFSQNEDKM 60
Query: 64 IVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELK 123
+L +NE+F VF+ NLM KCKQ IKLFKEGKE MY+E+S RRNLTKLSL FSHML ELK
Sbjct: 61 EILQDNEYFKVFLENLMNKCKQIIKLFKEGKEAMYNENSEERRNLTKLSLTFSHMLFELK 120
Query: 124 AIFPNGVFAG 133
AIFP G+F G
Sbjct: 121 AIFPEGIFIG 130
|
Cbl is an adaptor protein that binds EGF receptors (or other tyrosine kinases) and SH3 domains, functioning as a negative regulator of many signaling pathways. The N-terminal domain is evolutionarily conserved, and is known to bind to phosphorylated tyrosine residues. Cbl_N is comprised of 3 structural domains of which this is the first - a four helix bundle. Length = 130 |
| >gnl|CDD|202379 pfam02761, Cbl_N2, CBL proto-oncogene N-terminus, EF hand-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| KOG1785|consensus | 563 | 100.0 | ||
| PF02262 | 130 | Cbl_N: CBL proto-oncogene N-terminal domain 1; Int | 100.0 |
| >KOG1785|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-75 Score=518.39 Aligned_cols=152 Identities=68% Similarity=1.172 Sum_probs=148.8
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHHccCCCCCCCCCCCcccchhhHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHH
Q psy9197 3 PPKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMIVLHNNEFFNVFIVNLMRK 82 (154)
Q Consensus 3 ~~~~~~D~r~~~k~~klmdkvv~lC~~prLnLknSPP~ildiLpdt~q~L~~I~~~~~~~~~~l~~~~yl~i~i~nL~~K 82 (154)
.+....|||+|+||||+|||||++|||||||||||||||+|||||||||||.|+++|++.++.+.+||||.|||+|||+|
T Consensus 37 ~~~~~~dkr~l~k~~klmdkvv~~C~~Prl~lknSPP~ilDiLPdTyqhLrli~s~~~d~~~~~~~ndy~~ifl~nlm~K 116 (563)
T KOG1785|consen 37 VPSTVLDKRTLEKAWKLMDKVVKLCQNPRLNLKNSPPFILDILPDTYQHLRLILSKNEDIMQLLPENDYLKIFLENLMKK 116 (563)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCcHHHHhchhHHHHHHHHHHhhhhhhccCccccHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhchhhhhccchhhhhhhhhHHHHHHHHHHHHhhhCCCCeecCCcceeecccHHHHHHhhcCCC
Q psy9197 83 CKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKAIFPNGVFAGDQFRITKSDAADFWRNNFGNA 154 (154)
Q Consensus 83 ~kq~~~LfK~~~e~mf~E~S~~RR~LtKLsLiFSHMlaELkAlFP~G~f~g~~friTK~~A~~FWr~~FG~~ 154 (154)
|||||+|||+++|+||+|+|++|||||||||||||||+||||+||+|.||||+|||||+||++|||++||++
T Consensus 117 ~kq~i~Lfk~~~e~my~e~S~~RRnLtKlsliFSHMlaElkalFP~G~~~gd~friTKadA~~FWr~~fg~k 188 (563)
T KOG1785|consen 117 CKQAIKLFKESAERMYEEQSQERRNLTKLSLIFSHMLAELKALFPNGIYQGDRFRITKADAAEFWRKHFGKK 188 (563)
T ss_pred HHHHHHHHHHhHHHHHhhccHHhhhhHHHHHHHHHHHHHHHhhCCCCeeecceeeeccccHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >PF02262 Cbl_N: CBL proto-oncogene N-terminal domain 1; InterPro: IPR003153 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 154 | ||||
| 3pfv_A | 315 | Crystal Structure Of Cbl-B Tkb Domain In Complex Wi | 9e-58 | ||
| 3vgo_A | 394 | Crystal Structure Of The N-Terminal Fragment Of Cbl | 2e-57 | ||
| 4a4b_A | 391 | Structure Of Modified Phosphotyr371-C-Cbl-Ubch5b-Za | 1e-56 | ||
| 1fbv_A | 388 | Structure Of A Cbl-Ubch7 Complex: Ring Domain Funct | 1e-56 | ||
| 2cbl_A | 305 | N-Terminal Domain Of Cbl In Complex With Its Bindin | 1e-56 | ||
| 2y1m_A | 389 | Structure Of Native C-Cbl Length = 389 | 1e-56 | ||
| 4a4c_A | 391 | Structure Of Phosphotyr371-C-Cbl-Ubch5b-Zap-70 Comp | 1e-56 | ||
| 1b47_A | 304 | Structure Of The N-Terminal Domain Of Cbl In Comple | 1e-56 | ||
| 1yvh_A | 329 | Crystal Structure Of The C-Cbl Tkb Domain In Comple | 2e-56 | ||
| 3op0_A | 323 | Crystal Structure Of Cbl-C (Cbl-3) Tkb Domain In Co | 5e-18 |
| >pdb|3PFV|A Chain A, Crystal Structure Of Cbl-B Tkb Domain In Complex With Egfr Py1069 Peptide Length = 315 | Back alignment and structure |
|
| >pdb|3VGO|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Cbl-B Length = 394 | Back alignment and structure |
| >pdb|4A4B|A Chain A, Structure Of Modified Phosphotyr371-C-Cbl-Ubch5b-Zap-70 Complex Length = 391 | Back alignment and structure |
| >pdb|1FBV|A Chain A, Structure Of A Cbl-Ubch7 Complex: Ring Domain Function In Ubiquitin-Protein Ligases Length = 388 | Back alignment and structure |
| >pdb|2CBL|A Chain A, N-Terminal Domain Of Cbl In Complex With Its Binding Site On Zap-70 Length = 305 | Back alignment and structure |
| >pdb|2Y1M|A Chain A, Structure Of Native C-Cbl Length = 389 | Back alignment and structure |
| >pdb|4A4C|A Chain A, Structure Of Phosphotyr371-C-Cbl-Ubch5b-Zap-70 Complex Length = 391 | Back alignment and structure |
| >pdb|1B47|A Chain A, Structure Of The N-Terminal Domain Of Cbl In Complex With Its Binding Site In Zap-70 Length = 304 | Back alignment and structure |
| >pdb|1YVH|A Chain A, Crystal Structure Of The C-Cbl Tkb Domain In Complex With The Aps Ptyr-618 Phosphopeptide Length = 329 | Back alignment and structure |
| >pdb|3OP0|A Chain A, Crystal Structure Of Cbl-C (Cbl-3) Tkb Domain In Complex With Egfr Py1069 Peptide Length = 323 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 154 | |||
| 3bux_B | 329 | E3 ubiquitin-protein ligase CBL; TKB, signal trans | 1e-83 | |
| 2y1n_A | 389 | E3 ubiquitin-protein ligase; ligase-transferase co | 3e-83 | |
| 3op0_A | 323 | Signal transduction protein CBL-C; structural geno | 1e-71 | |
| 1uur_A | 473 | Stata protein, STAT protein; transcription activat | 9e-11 |
| >3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A* Length = 329 | Back alignment and structure |
|---|
Score = 248 bits (633), Expect = 1e-83
Identities = 98/153 (64%), Positives = 122/153 (79%)
Query: 1 MAPPKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYE 60
P DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE
Sbjct: 22 SPHPPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYE 81
Query: 61 DKMIVLHNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLS 120
KM L NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+
Sbjct: 82 GKMETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLA 141
Query: 121 ELKAIFPNGVFAGDQFRITKSDAADFWRNNFGN 153
ELK IFP+G+F GD FRITK+DAA+FWR FG
Sbjct: 142 ELKGIFPSGLFQGDTFRITKADAAEFWRKAFGE 174
|
| >2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A* Length = 389 | Back alignment and structure |
|---|
| >3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens} Length = 323 | Back alignment and structure |
|---|
| >1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A* Length = 473 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| 3bux_B | 329 | E3 ubiquitin-protein ligase CBL; TKB, signal trans | 100.0 | |
| 3op0_A | 323 | Signal transduction protein CBL-C; structural geno | 100.0 | |
| 2y1n_A | 389 | E3 ubiquitin-protein ligase; ligase-transferase co | 100.0 |
| >3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-77 Score=513.17 Aligned_cols=153 Identities=64% Similarity=1.115 Sum_probs=149.5
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHHccCCCCCCCCCCCcccchhhHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHH
Q psy9197 2 APPKLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMIVLHNNEFFNVFIVNLMR 81 (154)
Q Consensus 2 ~~~~~~~D~r~~~k~~klmdkvv~lC~~prLnLknSPP~ildiLpdt~q~L~~I~~~~~~~~~~l~~~~yl~i~i~nL~~ 81 (154)
++|+.++|||+|+|+||+|||||++||+||||||||||||+||||||||||+.|+++|++.+++|++||||+|||.||++
T Consensus 23 ~~~~~~~D~r~l~k~~k~mdkv~klCq~prlnLkNSPP~i~diLpdTy~~L~~i~~~~~~~~~~L~~~ey~~i~i~nL~~ 102 (329)
T 3bux_B 23 PHPPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKMETLGENEYFRVFMENLMK 102 (329)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHTCGGGCCCSCSSCHHHHHHHHHHHHHHHHHHTSSCHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHhcCCcccCCCCCccHHHHhHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhchhhhhccchhhhhhhhhHHHHHHHHHHHHhhhCCCCeecCCcceeecccHHHHHHhhcCCC
Q psy9197 82 KCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKAIFPNGVFAGDQFRITKSDAADFWRNNFGNA 154 (154)
Q Consensus 82 K~kq~~~LfK~~~e~mf~E~S~~RR~LtKLsLiFSHMlaELkAlFP~G~f~g~~friTK~~A~~FWr~~FG~~ 154 (154)
|||||++|||+|+|+||+|+|++|||||||||||||||+||+|+||+|+||||+|||||++|++||+++||+.
T Consensus 103 Kckq~~~Lfk~~ke~mf~e~S~~RR~L~KLsLIfSHmL~eL~AlFP~G~f~g~~frItK~~A~eFW~~~FG~r 175 (329)
T 3bux_B 103 KTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGDTFRITKADAAEFWRKAFGEK 175 (329)
T ss_dssp HHHHHHHHHHHHGGGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHSGGGSCCGGGCCCSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhhHhhhhhcchhhhhHHHHHHHHHHHHHHHHhhCCCCeecCCceeecChHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
|
| >3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens} | Back alignment and structure |
|---|
| >2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 154 | ||||
| d3buxb2 | 130 | a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cb | 3e-73 | |
| d3buxb1 | 86 | a.39.1.7 (B:178-263) Cbl {Human (Homo sapiens) [Ta | 1e-04 |
| >d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]} Length = 130 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: N-cbl like superfamily: N-terminal domain of cbl (N-cbl) family: N-terminal domain of cbl (N-cbl) domain: N-terminal domain of cbl (N-cbl) species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (544), Expect = 3e-73
Identities = 84/128 (65%), Positives = 106/128 (82%)
Query: 7 ATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMIVL 66
DK+ ++K WKLMDKVV+LCQ+PK+ LKNSPP++LD+LPDTYQ L+ I ++YE KM L
Sbjct: 3 TVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKMETL 62
Query: 67 HNNEFFNVFIVNLMRKCKQAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKAIF 126
NE+F VF+ NLM+K KQ I LFKEGKE+MY+E+S RRNLTKLSL+FSHML+ELK IF
Sbjct: 63 GENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIF 122
Query: 127 PNGVFAGD 134
P+G+F GD
Sbjct: 123 PSGLFQGD 130
|
| >d3buxb1 a.39.1.7 (B:178-263) Cbl {Human (Homo sapiens) [TaxId: 9606]} Length = 86 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| d3buxb2 | 130 | N-terminal domain of cbl (N-cbl) {Human (Homo sapi | 100.0 |
| >d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: N-cbl like superfamily: N-terminal domain of cbl (N-cbl) family: N-terminal domain of cbl (N-cbl) domain: N-terminal domain of cbl (N-cbl) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-76 Score=454.95 Aligned_cols=130 Identities=65% Similarity=1.102 Sum_probs=128.4
Q ss_pred CchhhhhHHHHHHHHHHHHHHHccCCCCCCCCCCCcccchhhHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHH
Q psy9197 5 KLATDKRTLDKTWKLMDKVVKLCQHPKMNLKNSPPFLLDILPDTYQRLKLIYTKYEDKMIVLHNNEFFNVFIVNLMRKCK 84 (154)
Q Consensus 5 ~~~~D~r~~~k~~klmdkvv~lC~~prLnLknSPP~ildiLpdt~q~L~~I~~~~~~~~~~l~~~~yl~i~i~nL~~K~k 84 (154)
|.+||||+|+||||+|||||++|||||||||||||||+||||||||||+.|+++|++++++|++||||+|||.||++|||
T Consensus 1 ~~~iD~k~l~k~~klldkv~~lCq~Prl~LKnSPP~ilDiLpdT~~~Lr~i~~~~e~~~~~l~e~ey~~iyl~nL~~K~k 80 (130)
T d3buxb2 1 PGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKMETLGENEYFRVFMENLMKKTK 80 (130)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTCGGGCCCSCSSCHHHHHHHHHHHHHHHHHHTSSCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcCCccccCCCCchHHHHhHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhchhhhhccchhhhhhhhhHHHHHHHHHHHHhhhCCCCeecCC
Q psy9197 85 QAIKLFKEGKEKMYDESSHYRRNLTKLSLVFSHMLSELKAIFPNGVFAGD 134 (154)
Q Consensus 85 q~~~LfK~~~e~mf~E~S~~RR~LtKLsLiFSHMlaELkAlFP~G~f~g~ 134 (154)
||++|||+|+|+||+|+|++|||||||||||||||+||+|+||+|+||||
T Consensus 81 q~i~LFK~~kekmfde~S~~Rr~LtKLsLiFSHMlaelkalfP~g~~~gd 130 (130)
T d3buxb2 81 QTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGD 130 (130)
T ss_dssp HHHHHHHHHGGGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHSGGGSCCGG
T ss_pred HHHHHHHhhhHhhhccccHHHHHhHHHHHHHHHHHHHHHHhCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999996
|