Psyllid ID: psy9306

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MITPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQVKELF
Secondary Structure (PSIPRED)
cccccccccEEEEEEcccccccEEEEEEEEEEEEEEEEEEcEEcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEccccccEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccccccEEEEEEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEccccccccEEcc
Coil and Loop (DISEMBL)
mitppkehygvditplsyiaggkIERYLGNLNFFFiresnciresgglsgfVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQVKELF
Flexible Loop (DISEMBL)
mitppkehygvdiTPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLnnqgknqvkelf
Low Complexity Region (SEG)
MITPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQVKELF
Disordered region (IsUnstruct)
********YGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNN**********
Disordered Region (DISOPRED)
*******HYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGK**VKELF
Disordered Region (DISEMBL)
MITPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQVKELF
Disordered Region (DISPRO)
MITPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQ**ELF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MITPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILLNNQGKNQVKELF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	98	2.2.26 [Sep-21-2011]
Q28BX9	1014	C2 domain-containing prot	yes	N/A	0.887	0.085	0.563	1e-25
Q7TPS5	1016	C2 domain-containing prot	yes	N/A	0.897	0.086	0.568	1e-25
Q5RDC8	1000	C2 domain-containing prot	yes	N/A	0.887	0.087	0.574	2e-25
Q86YS7	1000	C2 domain-containing prot	yes	N/A	0.887	0.087	0.574	2e-25

>sp|Q28BX9|C2CD5_XENTR C2 domain-containing protein 5 OS=Xenopus tropicalis GN=c2cd5 PE=2 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/87 (56%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI ++LG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 889 VKMTPLSFIPGAKITKFLGIINMFFIRETTSLREEGGVSGFLHAFICEVFAMVRAHVAAL 948

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 949 GGNAVVSYIMKQCVFMENANKNQAQCL 975

Xenopus tropicalis (taxid: 8364)

>sp|Q7TPS5|C2CD5_MOUSE C2 domain-containing protein 5 OS=Mus musculus GN=C2cd5 PE=1 SV=2

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 66/88 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 892 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 951

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKELF 98
           GGNA+VSY M  C+ + N  KNQ + L 
Sbjct: 952 GGNAVVSYIMKQCVFMENPSKNQAQCLI 979

Mus musculus (taxid: 10090)

>sp|Q5RDC8|C2CD5_PONAB C2 domain-containing protein 5 OS=Pongo abelii GN=C2CD5 PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 935 GGNAVVSYIMKQCVFMENPNKNQAQCL 961

Pongo abelii (taxid: 9601)

>sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 66/87 (75%)

Query: 11  VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
           V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct: 875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query: 71  GGNAMVSYTMTHCILLNNQGKNQVKEL 97
           GGNA+VSY M  C+ + N  KNQ + L
Sbjct: 935 GGNAVVSYIMKQCVFMENPNKNQAQCL 961


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.140    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,353,579
Number of Sequences: 539616
Number of extensions: 1348867
Number of successful extensions: 2327
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2320
Number of HSP's gapped (non-prelim): 7
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
345496847	1988	PREDICTED: hypothetical protein LOC10011	0.918	0.045	0.8	2e-37
328723802	1333	PREDICTED: uncharacterized protein KIAA0	0.908	0.066	0.808	1e-36
270015570	1567	hypothetical protein TcasGA2_TC001433 [T	0.918	0.057	0.777	2e-35
189241998	1576	PREDICTED: similar to CG6454 CG6454-PA [	0.918	0.057	0.777	2e-35
242014109	1081	conserved hypothetical protein [Pediculu	0.928	0.084	0.747	1e-34
383860512	1853	PREDICTED: uncharacterized protein LOC10	0.918	0.048	0.755	2e-34
350414932	1055	PREDICTED: uncharacterized protein KIAA0	0.918	0.085	0.755	2e-34
340720543	1055	PREDICTED: uncharacterized protein KIAA0	0.918	0.085	0.755	2e-34
307196740	1851	Uncharacterized protein KIAA0528-like pr	0.918	0.048	0.733	3e-34
322801321	1803	hypothetical protein SINV_80869 [Solenop	0.918	0.049	0.744	6e-34

>gi|345496847|ref|XP_001601149.2| PREDICTED: hypothetical protein LOC100116726 [Nasonia vitripennis]

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/90 (80%), Positives = 82/90 (91%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P KE YGVDITPLSY+ GG+IERYLGNLNFFFIRESN IRE+GGLSGF+HSFVTEVLAI+
Sbjct: 1865 PLKERYGVDITPLSYLPGGRIERYLGNLNFFFIRESNSIRENGGLSGFIHSFVTEVLAIV 1924

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAHVTALGGNAMV++ MT C+LL++  KNQ
Sbjct: 1925 RAHVTALGGNAMVAFFMTQCVLLHSPHKNQ 1954

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723802|ref|XP_001948489.2| PREDICTED: uncharacterized protein KIAA0528 homolog, partial [Acyrthosiphon pisum]

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/89 (80%), Positives = 78/89 (87%)

Query: 5    PKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILR 64
            PK+ YGVDITP++YI G KIERYLGNLNFFFIRES CIRESGGLSGFVH FV EV+AI+R
Sbjct: 1245 PKDRYGVDITPMTYIPGAKIERYLGNLNFFFIRESTCIRESGGLSGFVHCFVAEVMAIVR 1304

Query: 65   AHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            AHVTALGGNAMV+Y M  CILLNN  KNQ
Sbjct: 1305 AHVTALGGNAMVAYFMNECILLNNPHKNQ 1333

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015570|gb|EFA12018.1| hypothetical protein TcasGA2_TC001433 [Tribolium castaneum]

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/90 (77%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P KE +GVDITPLSY+ GGKIE YLGNLNFFFIRE+  IRE GGLSGF+HSFVTEVLAI+
Sbjct: 1457 PYKERHGVDITPLSYVPGGKIEHYLGNLNFFFIRETTSIREEGGLSGFIHSFVTEVLAIV 1516

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAHVTALGGNAMV+Y MT C+L +N  KNQ
Sbjct: 1517 RAHVTALGGNAMVAYFMTECVLNHNLHKNQ 1546

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241998|ref|XP_969442.2| PREDICTED: similar to CG6454 CG6454-PA [Tribolium castaneum]

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/90 (77%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P KE +GVDITPLSY+ GGKIE YLGNLNFFFIRE+  IRE GGLSGF+HSFVTEVLAI+
Sbjct: 1466 PYKERHGVDITPLSYVPGGKIEHYLGNLNFFFIRETTSIREEGGLSGFIHSFVTEVLAIV 1525

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAHVTALGGNAMV+Y MT C+L +N  KNQ
Sbjct: 1526 RAHVTALGGNAMVAYFMTECVLNHNLHKNQ 1555

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014109|ref|XP_002427740.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512181|gb|EEB15002.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 77/91 (84%)

Query: 3    TPPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAI 62
            TPP+  YGVDITPL Y+ GGKIE+YLGNLNFFFIRES CIRE GGL GF+HSF+TEVLAI
Sbjct: 971  TPPRSRYGVDITPLPYVPGGKIEKYLGNLNFFFIRESTCIREGGGLGGFIHSFITEVLAI 1030

Query: 63   LRAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            +RAHVTALGGNAMV+Y M+ C L +   KNQ
Sbjct: 1031 VRAHVTALGGNAMVAYFMSECFLYHYPHKNQ 1061

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860512|ref|XP_003705733.1| PREDICTED: uncharacterized protein LOC100880355 [Megachile rotundata]

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/90 (75%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P K  YGVDITPLSY+ GG+IERYLGNLNFFFIRES  IRE+GGLSGF HSFV EVLAI+
Sbjct: 1736 PLKGRYGVDITPLSYLPGGRIERYLGNLNFFFIRESTSIRENGGLSGFTHSFVMEVLAIV 1795

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAH+TALGGNAMV++ MT C+LL++  KNQ
Sbjct: 1796 RAHITALGGNAMVAFFMTKCVLLHSPHKNQ 1825

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350414932|ref|XP_003490476.1| PREDICTED: uncharacterized protein KIAA0528-like [Bombus impatiens]

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/90 (75%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P K  YGVDITPLSY+ GG+IERYLGNLNFFFIRES  IRE+GGLSGF HSFV EVLAI+
Sbjct: 938  PLKGRYGVDITPLSYLPGGRIERYLGNLNFFFIRESTSIRENGGLSGFTHSFVMEVLAIV 997

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAH+TALGGNAMV++ MT C+LL++  KNQ
Sbjct: 998  RAHITALGGNAMVAFFMTKCVLLHSPHKNQ 1027

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720543|ref|XP_003398694.1| PREDICTED: uncharacterized protein KIAA0528-like [Bombus terrestris]

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/90 (75%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P K  YGVDITPLSY+ GG+IERYLGNLNFFFIRES  IRE+GGLSGF HSFV EVLAI+
Sbjct: 938  PLKGRYGVDITPLSYLPGGRIERYLGNLNFFFIRESTSIRENGGLSGFTHSFVMEVLAIV 997

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAH+TALGGNAMV++ MT C+LL++  KNQ
Sbjct: 998  RAHITALGGNAMVAFFMTKCVLLHSPHKNQ 1027

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196740|gb|EFN78199.1| Uncharacterized protein KIAA0528-like protein [Harpegnathos saltator]

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/90 (73%), Positives = 78/90 (86%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P K  YGVDITPLSY+ GG+IERY GNLNFFFIRES  IRE+GGLSGF HSFV E+LAI+
Sbjct: 1734 PLKGRYGVDITPLSYLPGGRIERYQGNLNFFFIRESTSIRENGGLSGFTHSFVMEILAIV 1793

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAH+TALGGNAMV+++MT C+LL++  KNQ
Sbjct: 1794 RAHITALGGNAMVAFSMTQCVLLHSPHKNQ 1823

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801321|gb|EFZ22008.1| hypothetical protein SINV_80869 [Solenopsis invicta]

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/90 (74%), Positives = 77/90 (85%)

Query: 4    PPKEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAIL 63
            P K  YGVDITPLSY+ GG+IERY GNLNFFFIRES  IRE+GGLSGF HSFV EVLAI+
Sbjct: 1686 PLKGRYGVDITPLSYLPGGRIERYQGNLNFFFIRESTSIRENGGLSGFTHSFVMEVLAIV 1745

Query: 64   RAHVTALGGNAMVSYTMTHCILLNNQGKNQ 93
            RAH+TALGGNAMV++ MT C+LL++  KNQ
Sbjct: 1746 RAHITALGGNAMVAFFMTQCVLLHSPHKNQ 1775

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
UNIPROTKB|Q86YS7	1000	C2CD5 "C2 domain-containing pr	0.867	0.085	0.576	1e-22
UNIPROTKB|Q5RDC8	1000	C2CD5 "C2 domain-containing pr	0.867	0.085	0.576	1e-22
RGD|1304592	1015	C2cd5 "C2 calcium-dependent do	0.867	0.083	0.576	1e-22
MGI|MGI:1921991	1016	C2cd5 "C2 calcium-dependent do	0.867	0.083	0.576	1e-22
UNIPROTKB|A6QLT3	1051	LOC520387 "LOC520387 protein"	0.867	0.080	0.576	1.1e-22
UNIPROTKB|D4A5B3	1037	RGD1304592 "Similar to KIAA052	0.846	0.080	0.590	1.4e-22
UNIPROTKB|Q28BX9	1014	c2cd5 "C2 domain-containing pr	0.867	0.083	0.564	3.5e-22
UNIPROTKB|E1BQJ4	1019	KIAA0528 "Uncharacterized prot	0.867	0.083	0.564	7.4e-22
DICTYBASE|DDB_G0269546	1546	DDB_G0269546 "C2 calcium-depen	0.928	0.058	0.445	8.7e-15

UNIPROTKB|Q86YS7 C2CD5 "C2 domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 275 (101.9 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   935 GGNAVVSYIMKQCVFMENPNKNQAQ 959

GO:0006906 "vesicle fusion" evidence=IEA

GO:0072659 "protein localization to plasma membrane" evidence=IEA

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0032587 "ruffle membrane" evidence=IDA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IDA

GO:0005544 "calcium-dependent phospholipid binding" evidence=IDA

GO:0031340 "positive regulation of vesicle fusion" evidence=IMP

GO:0065002 "intracellular protein transmembrane transport" evidence=IMP

GO:0090314 "positive regulation of protein targeting to membrane" evidence=IMP

GO:0010828 "positive regulation of glucose transport" evidence=ISS

GO:0038028 "insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade" evidence=ISS

UNIPROTKB|Q5RDC8 C2CD5 "C2 domain-containing protein 5" [Pongo abelii (taxid:9601)]

 Score = 275 (101.9 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   875 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 934

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   935 GGNAVVSYIMKQCVFMENPNKNQAQ 959

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005544 "calcium-dependent phospholipid binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005938 "cell cortex" evidence=ISS

GO:0010828 "positive regulation of glucose transport" evidence=ISS

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISS

GO:0031340 "positive regulation of vesicle fusion" evidence=ISS

GO:0032587 "ruffle membrane" evidence=ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISS

GO:0038028 "insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade" evidence=ISS

GO:0065002 "intracellular protein transmembrane transport" evidence=ISS

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISS

RGD|1304592 C2cd5 "C2 calcium-dependent domain containing 5" [Rattus norvegicus (taxid:10116)]

 Score = 275 (101.9 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   892 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 951

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   952 GGNAVVSYIMKQCVFMENPSKNQAQ 976

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005544 "calcium-dependent phospholipid binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005938 "cell cortex" evidence=ISO

GO:0006906 "vesicle fusion" evidence=ISO

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISO

GO:0031340 "positive regulation of vesicle fusion" evidence=ISO

GO:0032587 "ruffle membrane" evidence=ISO

GO:0032869 "cellular response to insulin stimulus" evidence=ISO

GO:0065002 "intracellular protein transmembrane transport" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISO

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=ISO

MGI|MGI:1921991 C2cd5 "C2 calcium-dependent domain containing 5" [Mus musculus (taxid:10090)]

 Score = 275 (101.9 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   892 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 951

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   952 GGNAVVSYIMKQCVFMENPSKNQAQ 976

GO:0005509 "calcium ion binding" evidence=ISO;IDA

GO:0005544 "calcium-dependent phospholipid binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005938 "cell cortex" evidence=ISO

GO:0006906 "vesicle fusion" evidence=IMP

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISO

GO:0031340 "positive regulation of vesicle fusion" evidence=ISO

GO:0032587 "ruffle membrane" evidence=ISO

GO:0032869 "cellular response to insulin stimulus" evidence=ISO

GO:0065002 "intracellular protein transmembrane transport" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=IGI;IMP

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISO

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=IGI;IMP

UNIPROTKB|A6QLT3 LOC520387 "LOC520387 protein" [Bos taurus (taxid:9913)]

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   926 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 985

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   986 GGNAVVSYIMKQCVFMENPNKNQAQ 1010

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=IEA

GO:0072659 "protein localization to plasma membrane" evidence=IEA

GO:0006906 "vesicle fusion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|D4A5B3 RGD1304592 "Similar to KIAA0528 protein (Predicted)" [Rattus norvegicus (taxid:10116)]

 Score = 274 (101.5 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 49/83 (59%), Positives = 64/83 (77%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   892 VKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 951

Query:    71 GGNAMVSYTMTHCILLNNQGKNQ 93
             GGNA+VSY M  C+ + N  KNQ
Sbjct:   952 GGNAVVSYIMKQCVFMENPSKNQ 974

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006906 "vesicle fusion" evidence=IEA

GO:0072659 "protein localization to plasma membrane" evidence=IEA

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=IEA

UNIPROTKB|Q28BX9 c2cd5 "C2 domain-containing protein 5" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 270 (100.1 bits), Expect = 3.5e-22, P = 3.5e-22
 Identities = 48/85 (56%), Positives = 65/85 (76%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I G KI ++LG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   889 VKMTPLSFIPGAKITKFLGIINMFFIRETTSLREEGGVSGFLHAFICEVFAMVRAHVAAL 948

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   949 GGNAVVSYIMKQCVFMENANKNQAQ 973

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005544 "calcium-dependent phospholipid binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005938 "cell cortex" evidence=ISS

GO:0010828 "positive regulation of glucose transport" evidence=ISS

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISS

GO:0031340 "positive regulation of vesicle fusion" evidence=ISS

GO:0032587 "ruffle membrane" evidence=ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISS

GO:0038028 "insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade" evidence=ISS

GO:0065002 "intracellular protein transmembrane transport" evidence=ISS

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISS

UNIPROTKB|E1BQJ4 KIAA0528 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 267 (99.0 bits), Expect = 7.4e-22, P = 7.4e-22
 Identities = 48/85 (56%), Positives = 64/85 (75%)

Query:    11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTAL 70
             V +TPLS+I   KI +YLG +N FFIRE+  +RE GG+SGF+H+F+ EV A++RAHV AL
Sbjct:   894 VKMTPLSFIPRAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAAL 953

Query:    71 GGNAMVSYTMTHCILLNNQGKNQVK 95
             GGNA+VSY M  C+ + N  KNQ +
Sbjct:   954 GGNAVVSYIMKQCVFMENPNKNQAQ 978

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006906 "vesicle fusion" evidence=IEA

GO:0072659 "protein localization to plasma membrane" evidence=IEA

GO:2001275 "positive regulation of glucose import in response to insulin stimulus" evidence=IEA

DICTYBASE|DDB_G0269546 DDB_G0269546 "C2 calcium-dependent membrane targeting domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 203 (76.5 bits), Expect = 8.7e-15, P = 8.7e-15
 Identities = 41/92 (44%), Positives = 57/92 (61%)

Query:     7 EHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAH 66
             E   V++TPLSY+ G K+E+YLG +N   I+ES  +R+ GGL  F H F+ E  AI RAH
Sbjct:  1407 EQRHVELTPLSYLPGSKLEKYLGRINIHLIKESFSVRDQGGLGVFGHVFLREANAIARAH 1466

Query:    67 VTALGGNAMVSYTMTHCILLNNQG-KNQVKEL 97
             V  +GGNA++ Y +    L+ + G K Q   L
Sbjct:  1467 VMGMGGNALIGYHIDEFTLILDSGPKGQAYSL 1498


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       98        98   0.00091  102 3  11 22  0.50    29
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  534 (57 KB)
  Total size of DFA:  105 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.78u 0.06s 10.84t   Elapsed:  00:00:05
  Total cpu time:  10.78u 0.06s 10.84t   Elapsed:  00:00:05
  Start:  Thu Aug 15 14:52:42 2013   End:  Thu Aug 15 14:52:47 2013

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q86YS7	C2CD5_HUMAN	No assigned EC number	0.5747	0.8877	0.087	yes	N/A
Q7TPS5	C2CD5_MOUSE	No assigned EC number	0.5681	0.8979	0.0866	yes	N/A
Q5RDC8	C2CD5_PONAB	No assigned EC number	0.5747	0.8877	0.087	yes	N/A
Q28BX9	C2CD5_XENTR	No assigned EC number	0.5632	0.8877	0.0857	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
KOG1031|consensus	1169		100.0
PRK00967	105	hypothetical protein; Provisional	98.11
PF01906	105	YbjQ_1: Putative heavy-metal-binding; InterPro: IP	98.1
PRK12855	103	hypothetical protein; Provisional	97.74
PRK02877	106	hypothetical protein; Provisional	97.73
PRK12856	103	hypothetical protein; Provisional	97.72
PRK01119	106	hypothetical protein; Provisional	97.7
PRK01217	114	hypothetical protein; Provisional	97.68
PRK03732	114	hypothetical protein; Provisional	97.5
TIGR03884	74	sel_bind_Methan selenium-binding protein. This mod	97.45
COG0393	108	Uncharacterized conserved protein [Function unknow	97.41
PF11524	81	SeleniumBinding: Selenium binding protein; InterPr	89.98

>KOG1031|consensus

Probab=100.00  E-value=2.6e-41  Score=294.31  Aligned_cols=94  Identities=55%  Similarity=1.055  Sum_probs=91.9

Q ss_pred             CCCcce-EEEeeccccCCceeeEEeeeeeEEEEeeeeeeeecCCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEEeeeE
Q psy9306           5 PKEHYG-VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHC   83 (98)
Q Consensus         5 ~~~~~~-V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~i~~~   83 (98)
                      .+++.+ |++||||+|||++|+||||+||||||||||++||.||+++|+|-||+|++|||||||+|||||||+||.|++|
T Consensus      1060 ~~d~~gvv~mtplsfipg~ki~kylg~in~ffirestsire~ggisgflh~fiael~amvrahiaalggnamvsf~i~e~ 1139 (1169)
T KOG1031|consen 1060 ANDRVGVVDMTPLSFIPGAKIDKYLGIINFFFIRESTSIREEGGISGFLHAFIAELFAMVRAHIAALGGNAMVSFIIKEC 1139 (1169)
T ss_pred             cccccceEecceecccccchhhhhhceeeEEEEecccchhhcCCchHHHHHHHHHHHHHHHHHHHhhcCceehHHHHhHH
Confidence            577888 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeCCCCCceeecC
Q psy9306          84 ILLNNQGKNQVKELF   98 (98)
Q Consensus        84 ~l~dn~~KNQ~qcl~   98 (98)
                      +++||+||||+||||
T Consensus      1140 m~~dn~~knq~qcli 1154 (1169)
T KOG1031|consen 1140 MFFDNPHKNQAQCLI 1154 (1169)
T ss_pred             hhccCCCcccceEEE
Confidence            999999999999996

>PRK00967 hypothetical protein; Provisional

Probab=98.11  E-value=2.8e-05  Score=54.19  Aligned_cols=75  Identities=19%  Similarity=0.318  Sum_probs=58.4

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeec--------CC-cchhH---HHHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRES--------GG-LSGFV---HSFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~--------gg-l~~F~---~~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|..+.+||.+|++|||.+.=--|+=..-.|+.        || +..+-   .+.-.|++.-..++...+|+||+++.+
T Consensus         2 iitTt~~i~G~~I~~~lG~V~G~~v~s~~~~~d~~a~~r~~~GGe~~~y~~~l~~aR~eA~~rm~~~A~~~GAnAIIgvr   81 (105)
T PRK00967          2 LVTTTENIPGKEIIEVIGEVFGLTTQSKNIVRDIGAGLKNVVGGEIKGYTEMLTEARDIAIDRMKEEAKQKGANAIVGMR   81 (105)
T ss_pred             EEEcCCCcCCeEEEEEeeEEEEEEEEccchHhHHHHHHhHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            6899999999999999999987777665555542        22 33333   333478888889999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-++.
T Consensus        82 ~d~~~~~   88 (105)
T PRK00967         82 FDSSSIR   88 (105)
T ss_pred             EEeeeec
Confidence            9998774

>PF01906 YbjQ_1: Putative heavy-metal-binding; InterPro: IPR002765 This family of bacterial proteins have not been characterised

Probab=98.10  E-value=1.9e-05  Score=54.03  Aligned_cols=75  Identities=23%  Similarity=0.372  Sum_probs=60.0

Q ss_pred             EEEeeccccCCceeeEEeeeeeEEEEeeeeeeee---------cCCcchh---HHHHHHHHHHHHHHHHHhhcccEEeEE
Q psy9306          11 VDITPLSYIAGGKIERYLGNLNFFFIRESNCIRE---------SGGLSGF---VHSFVTEVLAILRAHVTALGGNAMVSY   78 (98)
Q Consensus        11 V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre---------~ggl~~F---~~~fi~Ev~aivrAhV~alGGNAllsy   78 (98)
                      +.+|..+.+||.+|++|+|.+.=--++.....++         .|....+   ++..-.|++.-.+.+...+|+||+++.
T Consensus         1 mivtTt~~~~g~~I~~~~G~V~g~~v~~~~~~~~~~~~~~~~~gg~~~~~~~~l~~~r~~A~~~L~~~A~~~GAnAVIgv   80 (105)
T PF01906_consen    1 MIVTTTNTIPGYEITEYLGIVSGEVVRSRNILKDFFASLKDIVGGESKSYTEMLDEAREEALERLKEEAKELGANAVIGV   80 (105)
T ss_dssp             -EE-SSSSCTTEEECEEEEEEEEEEEEGHHHHHHHCTTCSSEEETTTCSCHHHHHHHHHHHHHHHHHHHHHTT-SEEEEE
T ss_pred             CEEEcCCCcCCEEEEEEeeEEEEEEEEeechhhhhhhhHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence            4688899999999999999999888877644444         2234444   677788999999999999999999999


Q ss_pred             EeeeEEE
Q psy9306          79 TMTHCIL   85 (98)
Q Consensus        79 ~i~~~~l   85 (98)
                      +++...+
T Consensus        81 ~~~~~~~   87 (105)
T PF01906_consen   81 RFDYSSI   87 (105)
T ss_dssp             EEEEEEE
T ss_pred             EEEeeee
Confidence            9999988

; PDB: 3QKB_A 1VR4_D 1Y2I_D 2GTC_C.

>PRK12855 hypothetical protein; Provisional

Probab=97.74  E-value=0.00024  Score=49.84  Aligned_cols=75  Identities=24%  Similarity=0.258  Sum_probs=58.2

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeee--------cCCcchhHHHHH----HHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRE--------SGGLSGFVHSFV----TEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre--------~ggl~~F~~~fi----~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|..+.+||.+|.+|+|.+.=--+|=..-.|+        .||-..=+++-+    .|++.=.++|.+.+|+||+++.+
T Consensus         2 iitTt~~i~g~~I~e~lGiV~G~~V~~~n~~kd~~a~lr~ivGG~~~~Y~~~l~~aR~~A~~rm~~~A~~lGAnAVVgvr   81 (103)
T PRK12855          2 IVTTTSTIQGKEIIEYVDIVNGEAIMGANIVRDLFASVRDVVGGRSGAYESKLKEARDIAMEEMKTLARQKNANAIVGID   81 (103)
T ss_pred             EEecCCCcCCeEEEEEeeEEEEEEEEeeeeHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            689999999999999999998887877777766        333333334444    45556668999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-.+.
T Consensus        82 ~d~~~i~   88 (103)
T PRK12855         82 VDYEVVR   88 (103)
T ss_pred             EEhhHhc
Confidence            9887664

>PRK02877 hypothetical protein; Provisional

Probab=97.73  E-value=0.0002  Score=50.32  Aligned_cols=75  Identities=23%  Similarity=0.249  Sum_probs=57.1

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeee--------cCCcchhHH----HHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRE--------SGGLSGFVH----SFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre--------~ggl~~F~~----~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|.-+.+||.+|++|+|.+.=--|+-..-.|+        .||-..=++    ..=.|++.=.++|...+|.||+++.+
T Consensus         2 ivtTt~~i~G~~I~e~lG~V~G~~V~~~n~~kd~~a~l~~i~GG~~~~Y~~~l~~aR~~A~~rm~~~A~~lGAnAVIgvr   81 (106)
T PRK02877          2 QFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGEQARALGADAVVGID   81 (106)
T ss_pred             EEecCCCcCCeEEEEEeeEEEEEEEEeechHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            678899999999999999998888876666665        222222233    34445566668999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-.+.
T Consensus        82 ~d~~~i~   88 (106)
T PRK02877         82 IDYETVG   88 (106)
T ss_pred             EEehhcc
Confidence            9987664

>PRK12856 hypothetical protein; Provisional

Probab=97.72  E-value=0.00026  Score=49.69  Aligned_cols=75  Identities=24%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeec--------CCcchhHHHHH----HHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRES--------GGLSGFVHSFV----TEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~--------ggl~~F~~~fi----~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|..+.+||.+|.+|+|.+.=--||=..-.|+.        ||-..=+++-+    .|++.=.++|.+.+|+||+++.+
T Consensus         2 iitTt~~i~G~~I~e~lGiV~G~~V~~~n~~kd~~a~lr~ivGG~~~~Y~~~l~~aR~~A~~rm~~~A~~lGAnAVvgvr   81 (103)
T PRK12856          2 IVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVD   81 (103)
T ss_pred             EEecCCCcCCeEEEEEeeEEEEEEEEeeeeHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            6889999999999999999988888877777762        33333333334    45555668999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-.+.
T Consensus        82 ~d~~~~~   88 (103)
T PRK12856         82 VDYEVVR   88 (103)
T ss_pred             EEhhHhc
Confidence            9887664

>PRK01119 hypothetical protein; Provisional

Probab=97.70  E-value=0.00031  Score=49.35  Aligned_cols=75  Identities=20%  Similarity=0.268  Sum_probs=57.5

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeec--------CC-cchh---HHHHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRES--------GG-LSGF---VHSFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~--------gg-l~~F---~~~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|..+.+||.+|++|+|.+.=--+|=..-.|+.        || ++++   +.+.=.|++.=..++...+|+||+++.+
T Consensus         2 iitTt~~i~G~~I~~~lG~V~G~~V~s~n~~kd~~a~lr~i~GG~~~~Y~~~l~~aR~~A~~rm~~~A~~lGAnAVIgvr   81 (106)
T PRK01119          2 IVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVD   81 (106)
T ss_pred             EEecCCCcCCeEEEEEeeEEEEEEEEEechhhhHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            6889999999999999999988777766666552        33 2222   3333456667778999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-.+.
T Consensus        82 ~d~~~ig   88 (106)
T PRK01119         82 IDYEVLG   88 (106)
T ss_pred             EEeeeec
Confidence            9987774

>PRK01217 hypothetical protein; Provisional

Probab=97.68  E-value=0.00029  Score=50.11  Aligned_cols=81  Identities=21%  Similarity=0.280  Sum_probs=60.0

Q ss_pred             CCcceEEEeeccccCCceeeEEeeeeeEEEEeeeeeeeec--------CC-cchh---HHHHHHHHHHHHHHHHHhhccc
Q psy9306           6 KEHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRES--------GG-LSGF---VHSFVTEVLAILRAHVTALGGN   73 (98)
Q Consensus         6 ~~~~~V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~--------gg-l~~F---~~~fi~Ev~aivrAhV~alGGN   73 (98)
                      .+...+++|..+.|||.+|.+|||.+.=--+|-..-.++.        || +..+   +...=.|++.=.+.+-..+|+|
T Consensus         3 ~~~~~mivtTt~~i~g~~I~e~lG~V~G~~V~s~~~~~d~~a~lr~~~GGe~~~Y~~~l~~aR~eA~~rm~~~A~~lGAn   82 (114)
T PRK01217          3 EEEGDVIVVTSEYIPGYRIVEVLGVVWGITVRSRGLGGNIVAGLRSLAGGEIKEYVEMAEQARNQALERMIDHAKELGAN   82 (114)
T ss_pred             cccCCEEEEcCCCcCCeEEEEEEEEEEEEEEEecchhhHHHHHHHHhhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            4567789999999999999999999987666654444442        22 2222   2334446777778999999999


Q ss_pred             EEeEEEeeeEEEe
Q psy9306          74 AMVSYTMTHCILL   86 (98)
Q Consensus        74 Allsy~i~~~~l~   86 (98)
                      |+++-|++.-.+.
T Consensus        83 AVVgvrfd~s~i~   95 (114)
T PRK01217         83 AVINVRFDSNEIS   95 (114)
T ss_pred             EEEEEEEEHHHhc
Confidence            9999999887664

>PRK03732 hypothetical protein; Provisional

Probab=97.50  E-value=0.0006  Score=48.68  Aligned_cols=77  Identities=21%  Similarity=0.308  Sum_probs=57.6

Q ss_pred             ceEEEeeccccCCceeeEEeeeeeEEEEeeeeeeeec--------CC-cchh---HHHHHHHHHHHHHHHHHhhcccEEe
Q psy9306           9 YGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRES--------GG-LSGF---VHSFVTEVLAILRAHVTALGGNAMV   76 (98)
Q Consensus         9 ~~V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~--------gg-l~~F---~~~fi~Ev~aivrAhV~alGGNAll   76 (98)
                      .++++|..+.+||.+|.+|+|.+.=--+|=..-.|+.        || ++.|   +.+.=.|++.=.+.+-+.+|+||++
T Consensus         6 ~~miitTT~~i~g~~I~~~lG~V~G~~V~s~n~~kd~~a~lr~i~GGe~~~Yt~~l~~aR~~A~~rm~~~A~~lGAnAVV   85 (114)
T PRK03732          6 EGIIVVTTETIPGYRIVEVKGIARGGIVKATHLGRDIMALLRNIKGGEVKEYTQMMAEAREEALRRMALHAKELGANAVV   85 (114)
T ss_pred             CCEEEEcCCCcCCeEEEEEEEEEEEEEEEEechHhHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            3588999999999999999999887777666555552        22 2222   2333356667778999999999999


Q ss_pred             EEEeeeEEE
Q psy9306          77 SYTMTHCIL   85 (98)
Q Consensus        77 sy~i~~~~l   85 (98)
                      +-+++.-.+
T Consensus        86 gvr~d~s~~   94 (114)
T PRK03732         86 NFRFATSNV   94 (114)
T ss_pred             EEEEEehhh
Confidence            999987655

>TIGR03884 sel_bind_Methan selenium-binding protein

Probab=97.45  E-value=0.00038  Score=47.00  Aligned_cols=53  Identities=34%  Similarity=0.520  Sum_probs=41.6

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeecCCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEEeeeE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHC   83 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~i~~~   83 (98)
                      ++|.-+-|||..+ +|||.++    -|+-+              ..|++.-...+.+.+|+||+++.|++.-
T Consensus         2 iitT~~~i~G~ei-~yl~iv~----~~~~d--------------~d~Al~eM~e~A~~lGAnAVVGvr~d~s   54 (74)
T TIGR03884         2 IITTADEIPGLQL-YYLGIVS----TESDN--------------VDEIVENLREKVKAKGGMGLIAFRITCA   54 (74)
T ss_pred             EEEecccCCCeEE-EEEEEEE----EecCC--------------HHHHHHHHHHHHHHcCCCEEEEEEEEcC
Confidence            6899999999999 9999997    22221              2345555667889999999999999864

This model describes a homopentameric selenium-binding protein with a suggested role in selenium transport and delivery to selenophosphate synthase, the SelD protein. This protein family is closely related to pfam01906, but is shorter because of several deleted regions. It is restricted to the archaeal genus Methanococcus.

>COG0393 Uncharacterized conserved protein [Function unknown]

Probab=97.41  E-value=0.0007  Score=48.36  Aligned_cols=76  Identities=28%  Similarity=0.283  Sum_probs=57.8

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeee--------cCCcchhHH----HHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRE--------SGGLSGFVH----SFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre--------~ggl~~F~~----~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|.-.+|||.+|.+|+|.+.--.|+=..-.|+        .||=.+=+.    +.=.|++.=.+.+.++||.||+++.+
T Consensus         2 i~tTT~~I~G~~I~~~~G~v~G~~V~g~n~~~d~~agir~i~GGe~~~Y~~~l~~aR~~Al~rm~~~A~~lGAnAVVgvr   81 (108)
T COG0393           2 IITTTPTIEGKRIVEYLGVVTGETVRGANVGRDIFAGIRDIVGGEIKAYEKMLAEAREEALERMVDEAEALGANAVVGVR   81 (108)
T ss_pred             EEecCCCcCCEEEEEEeeEEEEEEEEEeeehhhHHHhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence            578889999999999999999888887777665        222222222    33345666677899999999999999


Q ss_pred             eeeEEEee
Q psy9306          80 MTHCILLN   87 (98)
Q Consensus        80 i~~~~l~d   87 (98)
                      ++.-.+.+
T Consensus        82 ~d~~~ig~   89 (108)
T COG0393          82 FDYSTIGE   89 (108)
T ss_pred             echhHhCC
Confidence            98877653

>PF11524 SeleniumBinding: Selenium binding protein; InterPro: IPR021603 Selenium is an important nutrient which needs to be regulated since lack of the nutrient leads to cell abnormalities and high concentrations are toxic

Probab=89.98  E-value=0.8  Score=31.53  Aligned_cols=55  Identities=29%  Similarity=0.410  Sum_probs=33.3

Q ss_pred             ceEEEeeccccCCceeeEEeeeeeEEEEeeeeeeeecCCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEEeee
Q psy9306           9 YGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTH   82 (98)
Q Consensus         9 ~~V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~i~~   82 (98)
                      ..++||.-+-|||-.+ -|+|.++     |+..             =..|+....+-.|++.+|+++++||++.
T Consensus         5 ~~~IITT~~eIPGiel-y~~gIvS-----~~~e-------------nvd~li~~lee~vk~k~~~giigFki~~   59 (81)
T PF11524_consen    5 DEFIITTTNEIPGIEL-YYLGIVS-----EASE-------------NVDELIKKLEEKVKAKGGMGIIGFKITA   59 (81)
T ss_dssp             SSSEEESSS--TTS---EEEEEEE-----EBSS-------------SHHHHHHHHHHHHHHTT--EEES----S
T ss_pred             ceEEEEEcCcCCCeEE-EeehhHH-----HHHh-------------hHHHHHHHHHHHHHhCCCceEEEEEEEe
Confidence            3578999999999765 5677664     2221             1456777788899999999999999986

SeBP regulates the level of free selenium in the cell by sequestering the nutrient during transport. SeBP acts as a pentamer and delivers the selenium to the selenophosphate synthetase enzyme []. Each subunit is composed of an alpha helix on top of a four stranded twisted ss sheet, stabilised by hydrogen bonds []. members of this entry are restricted to the archaeal Methanococcales.; PDB: 2JZ7_D.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
1vr4_A	103	Hypothetical protein APC22750; structural genomics	98.0
1y2i_A	133	Hypothetical protein S0862; structural genomics, p	97.88
2jz7_A	81	Selenium binding protein; NMR {Methanococcus vanni	97.35
3qkb_A	111	Uncharacterized protein; beta/alpha-propeller, str	81.82

>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A

Probab=98.00  E-value=2.4e-05  Score=53.30  Aligned_cols=75  Identities=20%  Similarity=0.219  Sum_probs=60.9

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeee------------cCCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRE------------SGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre------------~ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|..+.+||.+|.+|+|.+.=--|+-..-.|+            .++...-+.+.-.|++.=.+++.+++|+||+++.+
T Consensus         2 iitTt~~i~G~~I~~~lGiV~G~~v~~~n~~~d~~a~lr~i~GG~~~~y~~~l~~aR~~A~~rm~~~A~~lGAnAVVgvr   81 (103)
T 1vr4_A            2 IVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVD   81 (103)
T ss_dssp             EECSSSSBTTBCCCEEEEEEEEEEEECHHHHHTTCGGGSSEEETTTTSSSCTTHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             EEEcCCCcCCeEEEEEeeEEEEEEEEeechhhhHHHHhhHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence            688999999999999999998887776543443            22333446677889999999999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++.-.+.
T Consensus        82 ~d~~~i~   88 (103)
T 1vr4_A           82 VDYEVVR   88 (103)
T ss_dssp             EEEEEEG
T ss_pred             EEeeeeC
Confidence            9998774

>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1

Probab=97.88  E-value=5.6e-05  Score=53.88  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=59.5

Q ss_pred             CcceEEEeeccccCCceeeEEeeeeeEEEEeeeeeeee---------cCCcchh---HHHHHHHHHHHHHHHHHhhcccE
Q psy9306           7 EHYGVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRE---------SGGLSGF---VHSFVTEVLAILRAHVTALGGNA   74 (98)
Q Consensus         7 ~~~~V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre---------~ggl~~F---~~~fi~Ev~aivrAhV~alGGNA   74 (98)
                      +...+++|..+.+||.+|.+|+|.+.=--|+-..-.|+         .|-+.++   +.+.-.|++.=.+++.+++|+||
T Consensus        21 ~~~~mivtTt~~i~G~~I~e~lGiV~G~~V~~~n~~kd~~a~lr~ivGG~~~~Y~~~l~~aR~~Al~rm~~~A~~lGAnA  100 (133)
T 1y2i_A           21 QSNAMQFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADA  100 (133)
T ss_dssp             ----CEECSSSSCTTEEEEEEEEEEEEEEEECHHHHHHHTTTCCSEEETTTCTHHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             cCCceEEEeCCCcCCeEEEEEeeEEEEEEEEeechhhhHhHhhhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence            44568899999999999999999988777775433333         2233333   33445788888889999999999


Q ss_pred             EeEEEeeeEEEe
Q psy9306          75 MVSYTMTHCILL   86 (98)
Q Consensus        75 llsy~i~~~~l~   86 (98)
                      +++.+++.-.+.
T Consensus       101 VVGvr~d~~~i~  112 (133)
T 1y2i_A          101 VVGIDIDYETVG  112 (133)
T ss_dssp             EEEEEEEEEEES
T ss_pred             EEEEEEEeeeec
Confidence            999999998885

>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}

Probab=97.35  E-value=9.6e-05  Score=49.41  Aligned_cols=55  Identities=27%  Similarity=0.317  Sum_probs=44.2

Q ss_pred             eEEEeeccccCCceeeEEeeeeeEEEEeeeeeeeecCCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEEeeeE
Q psy9306          10 GVDITPLSYIAGGKIERYLGNLNFFFIRESNCIRESGGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYTMTHC   83 (98)
Q Consensus        10 ~V~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~i~~~   83 (98)
                      ..++|..+.|||.+| +|+|.+.=--|                  .=.|++.=...+.+++|+||+++.+++.-
T Consensus         6 ~miitTT~~i~G~~I-~~lGiV~G~~v------------------aR~~A~~rm~e~A~~lGAnAVVgvr~d~~   60 (81)
T 2jz7_A            6 KFIITTADEIPGLQL-YSLGIASTISD------------------NVDEIVENLRKQVKAKGGMGLIAFRITCA   60 (81)
T ss_dssp             SSEEESSCCCTTSCC-EEEEEECCCCS------------------SHHHHHHHHHHHHHHTTCCEEECCCCCCC
T ss_pred             cEEEEeCCCcCCcEE-EEEEEEEEEEe------------------hHHHHHHHHHHHHHHcCCCEEEEEEEEcc
Confidence            578999999999999 99998753222                  34466666778999999999999998764

>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}

Probab=81.82  E-value=3.7  Score=28.58  Aligned_cols=36  Identities=11%  Similarity=0.253  Sum_probs=30.7

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcccEEeEEEeeeEEEe
Q psy9306          51 FVHSFVTEVLAILRAHVTALGGNAMVSYTMTHCILL   86 (98)
Q Consensus        51 F~~~fi~Ev~aivrAhV~alGGNAllsy~i~~~~l~   86 (98)
                      -+.....|+..=...+..++|+||+++.|++.-.+-
T Consensus        55 ~~~ear~eA~~rM~e~A~~lGANAVIgvrfdts~i~   90 (111)
T 3qkb_A           55 MFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVE   90 (111)
T ss_dssp             GHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCEEEEEEEEhhhhc
Confidence            455667788888889999999999999999988774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d1vr4a1	103	Hypothetical protein BC1012 {Bacillus cereus [TaxI	98.05
d1y2ia_	109	Hypothetical protein YbjQ {Shigella flexneri [TaxI	97.95

>d1vr4a1 d.230.5.1 (A:1-103) Hypothetical protein BC1012 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Dodecin subunit-like
superfamily: YbjQ-like
family: YbjQ-like
domain: Hypothetical protein BC1012
species: Bacillus cereus [TaxId: 1396]

Probab=98.05  E-value=9.1e-06  Score=53.27  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=60.6

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeec------------CCcchhHHHHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRES------------GGLSGFVHSFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~------------ggl~~F~~~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      .+|..+.+||.+|++|+|.+.=-.++...-.++.            ......+...-.|++.-.+++...+|+||+++.+
T Consensus         2 iitTt~~i~g~~I~~~lG~V~g~~v~~~~~~~~~~a~~~~~~gG~~~~y~~~l~~aR~eA~~rl~~~A~~lGAnAVIgvr   81 (103)
T d1vr4a1           2 IVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVD   81 (103)
T ss_dssp             EECSSSSBTTBCCCEEEEEEEEEEEECHHHHHTTCGGGSSEEETTTTSSSCTTHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             EEeCCCCCCCcEEEEEeeeEEEEEEEeechHHhHhHHhhhhhCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence            4788899999999999999977667666555542            1233446777899999999999999999999999


Q ss_pred             eeeEEEe
Q psy9306          80 MTHCILL   86 (98)
Q Consensus        80 i~~~~l~   86 (98)
                      ++...+-
T Consensus        82 ~d~~~~~   88 (103)
T d1vr4a1          82 VDYEVVR   88 (103)
T ss_dssp             EEEEEEG
T ss_pred             EEEEEEc
Confidence            9988774

>d1y2ia_ d.230.5.1 (A:) Hypothetical protein YbjQ {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a+b)
fold: Dodecin subunit-like
superfamily: YbjQ-like
family: YbjQ-like
domain: Hypothetical protein YbjQ
species: Shigella flexneri [TaxId: 623]

Probab=97.95  E-value=1.9e-05  Score=52.31  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=59.7

Q ss_pred             EEeeccccCCceeeEEeeeeeEEEEeeeeeeeec---------CCcc---hhHHHHHHHHHHHHHHHHHhhcccEEeEEE
Q psy9306          12 DITPLSYIAGGKIERYLGNLNFFFIRESNCIRES---------GGLS---GFVHSFVTEVLAILRAHVTALGGNAMVSYT   79 (98)
Q Consensus        12 ~iTPls~iPg~~i~kYLG~l~~hfIREst~vre~---------ggl~---~F~~~fi~Ev~aivrAhV~alGGNAllsy~   79 (98)
                      ++|....+||.+|++|+|.+.=-.++.....++.         |-+.   .-+...-.|++.=.+++...+|+||+++.+
T Consensus         2 ~itTt~~i~g~~I~~~lGiV~g~~v~s~~~~~~~~a~~~~~~Gg~~~~y~~~l~~aR~~Al~rl~~~A~~~GAnAVIgvr   81 (109)
T d1y2ia_           2 QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGID   81 (109)
T ss_dssp             EECSSSSCTTEEEEEEEEEEEEEEEECHHHHHHHTTTCCSEEETTTCTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred             EEEcCCCCCCcEEEEEeceEEEEEEEeechHHhHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence            5788999999999999999988777776555542         1222   334445567888889999999999999999


Q ss_pred             eeeEEEeeC
Q psy9306          80 MTHCILLNN   88 (98)
Q Consensus        80 i~~~~l~dn   88 (98)
                      ++.-.+-++
T Consensus        82 ~d~~~i~~~   90 (109)
T d1y2ia_          82 IDYETVGQN   90 (109)
T ss_dssp             EEEEEESTT
T ss_pred             EEEEEEcCC
Confidence            998777543