Psyllid ID: psy958
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 137 | ||||||
| 157132288 | 270 | ng,ng-dimethylarginine dimethylaminohydr | 0.598 | 0.303 | 0.505 | 8e-15 | |
| 312385254 | 227 | hypothetical protein AND_00970 [Anophele | 0.598 | 0.361 | 0.528 | 1e-14 | |
| 170040160 | 271 | ng,ng-dimethylarginine dimethylaminohydr | 0.598 | 0.302 | 0.494 | 2e-14 | |
| 328707340 | 272 | PREDICTED: N(G),N(G)-dimethylarginine di | 0.591 | 0.297 | 0.511 | 2e-14 | |
| 239789143 | 272 | ACYPI002551 [Acyrthosiphon pisum] | 0.591 | 0.297 | 0.511 | 3e-14 | |
| 328726816 | 242 | PREDICTED: N(G),N(G)-dimethylarginine di | 0.591 | 0.334 | 0.511 | 3e-14 | |
| 194764067 | 268 | GF21405 [Drosophila ananassae] gi|190619 | 0.605 | 0.309 | 0.466 | 1e-11 | |
| 91092842 | 317 | PREDICTED: similar to ng,ng-dimethylargi | 0.598 | 0.258 | 0.528 | 2e-11 | |
| 270003073 | 269 | hypothetical protein TcasGA2_TC000101 [T | 0.598 | 0.304 | 0.528 | 2e-11 | |
| 194895587 | 268 | GG19510 [Drosophila erecta] gi|190649939 | 0.605 | 0.309 | 0.477 | 3e-11 |
| >gi|157132288|ref|XP_001662541.1| ng,ng-dimethylarginine dimethylaminohydrolase [Aedes aegypti] gi|108871221|gb|EAT35446.1| AAEL012397-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 35 VDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFTG------ISKWTNEKGARAVADSFP 88
VD VR++++KEL P + +I D+ A+LDG DVLFTG +SKWTNE GARAVA +FP
Sbjct: 88 VDAVRSVLRKELDLP-LAEIADQNARLDGGDVLFTGREFFVGLSKWTNEAGARAVASAFP 146
Query: 89 EYPCTAIKVKNKNPKAKMSTSTGIDQLLV 117
EYPC IKV + + G D L V
Sbjct: 147 EYPCVPIKVTEHHHLKYYVSMAGNDVLCV 175
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312385254|gb|EFR29801.1| hypothetical protein AND_00970 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
| >gi|170040160|ref|XP_001847877.1| ng,ng-dimethylarginine dimethylaminohydrolase [Culex quinquefasciatus] gi|167863736|gb|EDS27119.1| ng,ng-dimethylarginine dimethylaminohydrolase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|328707340|ref|XP_003243365.1| PREDICTED: N(G),N(G)-dimethylarginine dimethylaminohydrolase 1-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|239789143|dbj|BAH71216.1| ACYPI002551 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|328726816|ref|XP_001952486.2| PREDICTED: N(G),N(G)-dimethylarginine dimethylaminohydrolase 1-like, partial [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|194764067|ref|XP_001964153.1| GF21405 [Drosophila ananassae] gi|190619078|gb|EDV34602.1| GF21405 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|91092842|ref|XP_968480.1| PREDICTED: similar to ng,ng-dimethylarginine dimethylaminohydrolase [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|270003073|gb|EEZ99520.1| hypothetical protein TcasGA2_TC000101 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|194895587|ref|XP_001978290.1| GG19510 [Drosophila erecta] gi|190649939|gb|EDV47217.1| GG19510 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 137 | ||||||
| FB|FBgn0030467 | 268 | CG1764 [Drosophila melanogaste | 0.591 | 0.302 | 0.477 | 6e-13 | |
| UNIPROTKB|H0Y7N1 | 188 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.319 | 0.442 | 3.3e-08 | |
| UNIPROTKB|A3KGN5 | 225 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.266 | 0.442 | 5.3e-08 | |
| UNIPROTKB|Q5SSV3 | 226 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.265 | 0.442 | 5.4e-08 | |
| UNIPROTKB|Q5SRR8 | 236 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.254 | 0.442 | 6.4e-08 | |
| UNIPROTKB|O95865 | 285 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.210 | 0.442 | 1.1e-07 | |
| MGI|MGI:1859016 | 285 | Ddah2 "dimethylarginine dimeth | 0.467 | 0.224 | 0.405 | 1.9e-07 | |
| UNIPROTKB|Q3SX44 | 285 | DDAH2 "N(G),N(G)-dimethylargin | 0.437 | 0.210 | 0.428 | 2.4e-07 | |
| RGD|1302955 | 285 | Ddah2 "dimethylarginine dimeth | 0.437 | 0.210 | 0.428 | 2.4e-07 | |
| UNIPROTKB|F1PBI2 | 288 | DDAH2 "Uncharacterized protein | 0.452 | 0.215 | 0.416 | 3.2e-07 |
| FB|FBgn0030467 CG1764 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 171 (65.3 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 42/88 (47%), Positives = 55/88 (62%)
Query: 36 DTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFTG------ISKWTNEKGARAVADSFPE 89
+++ I+KKEL P V++IED A+LDG DVLFTG IS +TNE+GARAVA ++PE
Sbjct: 87 ESMAIILKKELDIP-VIEIEDPNAQLDGGDVLFTGREFFVGISSFTNEEGARAVAMAYPE 145
Query: 90 YPCTAIKVKNKNPKAKMSTSTGIDQLLV 117
YP T I+V T G + L V
Sbjct: 146 YPVTPIRVNGTKRLKYYVTMAGPEVLCV 173
|
|
| UNIPROTKB|H0Y7N1 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A3KGN5 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5SSV3 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5SRR8 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O95865 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1859016 Ddah2 "dimethylarginine dimethylaminohydrolase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3SX44 DDAH2 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1302955 Ddah2 "dimethylarginine dimethylaminohydrolase 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PBI2 DDAH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 137 | |||
| pfam02274 | 286 | pfam02274, Amidinotransf, Amidinotransferase | 6e-04 |
| >gnl|CDD|216956 pfam02274, Amidinotransf, Amidinotransferase | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 6e-04
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 35 VDTVRAIIKKELRPPQ-VLDI---EDEEAKLDGSDVLFT-------GISKWTNEKGARAV 83
I+ K Q VLDI EDE A L+G D++ G+S+ T+E+G +
Sbjct: 90 RRLDILILLKHPYKVQLVLDISELEDENAFLEGGDMVLDHKGVVAYGVSERTDEEGIEEL 149
Query: 84 ADSFPEYPCT 93
A + P
Sbjct: 150 ARTLGYEPVA 159
|
This family contains glycine (EC:2.1.4.1) and inosamine (EC:2.1.4.2) amidinotransferases, enzymes involved in creatine and streptomycin biosynthesis respectively. This family also includes arginine deiminases, EC:3.5.3.6. These enzymes catalyze the reaction: arginine + H2O <=> citrulline + NH3. Also found in this family is the Streptococcus anti tumour glycoprotein. Length = 286 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 137 | |||
| COG1834 | 267 | N-Dimethylarginine dimethylaminohydrolase [Amino a | 99.78 | |
| PRK01388 | 406 | arginine deiminase; Provisional | 99.73 | |
| TIGR01078 | 405 | arcA arginine deiminase. Arginine deiminase is the | 99.7 | |
| PF02274 | 281 | Amidinotransf: Amidinotransferase; InterPro: IPR00 | 99.69 | |
| COG2235 | 409 | ArcA Arginine deiminase [Amino acid transport and | 99.03 | |
| PF04371 | 329 | PAD_porph: Porphyromonas-type peptidyl-arginine de | 94.33 | |
| PRK13551 | 362 | agmatine deiminase; Provisional | 90.48 | |
| TIGR03380 | 357 | agmatine_aguA agmatine deiminase. Members of this | 86.42 |
| >COG1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-19 Score=148.32 Aligned_cols=103 Identities=13% Similarity=0.113 Sum_probs=90.7
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeC-CcEEee-------ecCccccHHHHHHHHHhC
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDG-SDVLFT-------GISKWTNEKGARAVADSF 87 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEG-GDVL~t-------GlS~RTN~eGa~~La~~f 87 (137)
+.+.-+++ .+ =++|+||...+++|++ ++|++ ++.+..+ +.+|| ||||++ |.|.|||.+|++||++.|
T Consensus 76 ~~~~avl~-r~~~p~R~gE~~~~~~~~~-~lgi~-i~~~~~~-~~~eG~GD~l~~~~~~v~iG~s~RTn~egi~~l~~~L 151 (267)
T COG1834 76 TGEGAVLA-RMGAPERRGEEEAIKETLE-SLGIP-IYPRVEA-GVFEGAGDVLMDGGDTVYIGYSFRTNLEGIEQLQAWL 151 (267)
T ss_pred ecccEEEe-ccCChhhccCHHHHHHHHH-HcCCc-ccccccC-CCccccccEEEeCCcEEEEEeccccchHHHHHHHHHh
Confidence 34555555 44 5899999999999999 99999 8877764 89999 999988 999999999999999999
Q ss_pred C-CCCeEEEeCC-CCCCCccccccccCCeEEEEcCchh
Q psy958 88 P-EYPCTAIKVK-NKNPKAKMSTSTGIDQLLVRTQVEM 123 (137)
Q Consensus 88 p-~y~V~~V~v~-~~LHLK~~vs~lg~~~llv~~~~~~ 123 (137)
+ +|.|+.+.++ .+|||||+|++++++++|++.+--.
T Consensus 152 ~~~~~v~~~~~~~~~lHLdt~~~~l~e~~al~y~~~~~ 189 (267)
T COG1834 152 EEGYEVSLVRLDERYLHLDTVFNPLAEGLALAYPPAFS 189 (267)
T ss_pred ccCcEEEEEecCCceeehhheeeeccCcceeecchhcc
Confidence 9 9999999997 5899999999999999999976443
|
|
| >PRK01388 arginine deiminase; Provisional | Back alignment and domain information |
|---|
| >TIGR01078 arcA arginine deiminase | Back alignment and domain information |
|---|
| >PF02274 Amidinotransf: Amidinotransferase; InterPro: IPR003198 This family contains glycine and inosamine amidinotransferases, enzymes which are involved in creatine and streptomycin biosynthesis respectively | Back alignment and domain information |
|---|
| >COG2235 ArcA Arginine deiminase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04371 PAD_porph: Porphyromonas-type peptidyl-arginine deiminase; InterPro: IPR007466 Peptidyl-arginine deiminase (PAD) enzymes catalyse the deimination of the guanidino group from carboxy-terminal arginine residues of various peptides to produce ammonia | Back alignment and domain information |
|---|
| >PRK13551 agmatine deiminase; Provisional | Back alignment and domain information |
|---|
| >TIGR03380 agmatine_aguA agmatine deiminase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 137 | ||||
| 2ci1_A | 276 | Crystal Structure Of Dimethylarginine Dimethylamino | 5e-07 | ||
| 3p8p_A | 308 | Crystal Structure Of Human Dimethylarginine Dimethy | 5e-07 | ||
| 3i2e_A | 308 | Crystal Structure Of Human Dimethylarginine Dymethy | 5e-07 | ||
| 2jaj_A | 289 | Ddah1 Complexed With L-257 Length = 289 | 6e-07 | ||
| 2c6z_A | 284 | Crystal Structure Of Dimethylarginine Dimethylamino | 7e-07 | ||
| 2jai_A | 289 | Ddah1 Complexed With Citrulline Length = 289 | 2e-06 |
| >pdb|2CI1|A Chain A, Crystal Structure Of Dimethylarginine Dimethylaminohydrolase I In Complex With S-Nitroso- Lhomocysteine Length = 276 | Back alignment and structure |
|
| >pdb|3P8P|A Chain A, Crystal Structure Of Human Dimethylarginine Dimethylaminohydrolase-1 (Ddah-1) Variant C274s Bound With N5-(1-Iminopentyl)-L-Ornithine Length = 308 | Back alignment and structure |
| >pdb|3I2E|A Chain A, Crystal Structure Of Human Dimethylarginine Dymethylaminohydrolase-1 (Ddah-1) Length = 308 | Back alignment and structure |
| >pdb|2JAJ|A Chain A, Ddah1 Complexed With L-257 Length = 289 | Back alignment and structure |
| >pdb|2C6Z|A Chain A, Crystal Structure Of Dimethylarginine Dimethylaminohydrolase I In Complex With Citrulline Length = 284 | Back alignment and structure |
| >pdb|2JAI|A Chain A, Ddah1 Complexed With Citrulline Length = 289 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 137 | |||
| 3i4a_A | 308 | N(G),N(G)-dimethylarginine dimethylaminohydrolase | 99.84 | |
| 2ci1_A | 275 | NG, NG-dimethylarginine dimethylaminohydrolase 1; | 99.76 | |
| 1h70_A | 255 | NG, NG-dimethylarginine dimethylaminohydrolase; DD | 99.76 | |
| 1s9r_A | 410 | Arginine deiminase; hydrolase, 5-fold pseudo-symme | 99.65 | |
| 1bwd_A | 348 | ADT, protein (inosamine-phosphate amidinotransfera | 99.59 | |
| 4e4j_A | 433 | Arginine deiminase; L-arginine, L-citrulline, NH3, | 99.59 | |
| 2a9g_A | 418 | Arginine deiminase; arginine degradation pathway, | 99.57 | |
| 1jdw_A | 423 | L-arginine\:glycine amidinotransferase; creatine b | 99.55 | |
| 2ewo_A | 377 | Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, | 97.81 | |
| 2jer_A | 389 | Agmatine deiminase; hydrolase, tetramer, AGDI, 5- | 97.53 | |
| 1xkn_A | 355 | Putative peptidyl-arginine deiminase; alpha-beta p | 97.35 | |
| 1zbr_A | 349 | AAQ65385, conserved hypothetical protein; alpha-be | 94.33 | |
| 1xkn_A | 355 | Putative peptidyl-arginine deiminase; alpha-beta p | 93.13 | |
| 1zbr_A | 349 | AAQ65385, conserved hypothetical protein; alpha-be | 92.1 | |
| 2jer_A | 389 | Agmatine deiminase; hydrolase, tetramer, AGDI, 5- | 90.58 | |
| 2ewo_A | 377 | Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, | 89.65 | |
| 3hvm_A | 330 | Agmatine deiminase; hydrolase; 2.10A {Helicobacter | 88.43 | |
| 3h7c_X | 383 | Agmatine deiminase; structural genomics, protein s | 83.05 |
| >3i4a_A N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; DDAH, nitric oxide synthase regulation, acetylation, metal-binding, zinc; HET: LN5; 1.90A {Homo sapiens} PDB: 3i2e_A* 3p8e_A* 3p8p_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-21 Score=156.89 Aligned_cols=108 Identities=25% Similarity=0.414 Sum_probs=96.2
Q ss_pred ccccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee------ecCccccHHHHHHHHHhCC
Q psy958 16 RFDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT------GISKWTNEKGARAVADSFP 88 (137)
Q Consensus 16 ~~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t------GlS~RTN~eGa~~La~~fp 88 (137)
+..+..+++ ++ .++|++|...++++|+ ++|.+ +++++++++++||||||++ |+|.|||.+|+++|++.|+
T Consensus 106 vi~~~vii~-~m~~~~Rr~E~~~~~~~l~-~~g~~-i~~~~~~~~~lEGGDvl~~g~~v~vG~s~RTn~~gi~~l~~~l~ 182 (308)
T 3i4a_A 106 VCEETALIT-RPGAPSRRKEVDMMKEALE-KLQLN-IVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFK 182 (308)
T ss_dssp EETTEEEEC-CCSSGGGGGGHHHHHHHHH-TTTCE-EEECCCTTCCCCGGGEEECSSCEEEEESSSCCHHHHHHHHHHTT
T ss_pred EECCEEEEe-CCCchhhhhhHHHHHHHHH-HCCCe-EEEccCCCCcCccceEEEECCEEEEEEchhcCHHHHHHHHHHcC
Confidence 345667777 66 8999999999999999 88988 9998854599999999987 9999999999999999999
Q ss_pred CCCeEEEeCCCCCCCccccccccCCeEEEEcCchhhhc
Q psy958 89 EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQVEMFLN 126 (137)
Q Consensus 89 ~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~~~~~~~ 126 (137)
+|+|+++++..++|||++|+++++++++++.+...+..
T Consensus 183 ~~~Vv~v~~~~~~HLDt~~~~l~~~~~lv~~~~~~~~~ 220 (308)
T 3i4a_A 183 DYAVSTVPVADGLHLKSFCSMAGPNLIAIGSSESAQKA 220 (308)
T ss_dssp TSCEEEEECCTTCCGGGSEEEEETTEEEEECSHHHHHH
T ss_pred CCeEEEEECCCccChhheEEeeCCCEEEEECchhcHHH
Confidence 99999999999999999999999999999987655443
|
| >2ci1_A NG, NG-dimethylarginine dimethylaminohydrolase 1; NOS regulation, S-nitrosylation, zinc, MMA, ADMA, acetylation, metal-binding; HET: KOR K1R CIT; 1.08A {Bos taurus} PDB: 2c6z_A* 2ci3_A 2ci4_A 2ci5_A* 2ci6_A 2ci7_A 2jaj_A* 2jai_A* | Back alignment and structure |
|---|
| >1h70_A NG, NG-dimethylarginine dimethylaminohydrolase; DDAH, nitric oxide synthase inhibitor; HET: CIR; 1.8A {Pseudomonas aeruginosa} SCOP: d.126.1.3 PDB: 3rhy_A 3bpb_A* | Back alignment and structure |
|---|
| >1s9r_A Arginine deiminase; hydrolase, 5-fold pseudo-symmetric domain, 5- helix bundle domain, raction intermediate; HET: ARG; 1.60A {Mycoplasma arginini} SCOP: d.126.1.4 PDB: 1lxy_A* | Back alignment and structure |
|---|
| >1bwd_A ADT, protein (inosamine-phosphate amidinotransferase); streptomycin; 3.10A {Streptomyces griseus} SCOP: d.126.1.2 | Back alignment and structure |
|---|
| >4e4j_A Arginine deiminase; L-arginine, L-citrulline, NH3, hydrolase; 2.30A {Mycoplasma penetrans} | Back alignment and structure |
|---|
| >2a9g_A Arginine deiminase; arginine degradation pathway, catalyti mechanism, hydrolase; HET: ARG; 2.30A {Pseudomonas aeruginosa} SCOP: d.126.1.4 PDB: 1rxx_A 2abr_A* 2aci_A 2aaf_A* | Back alignment and structure |
|---|
| >1jdw_A L-arginine\:glycine amidinotransferase; creatine biosynthesis, catalytic triad, reaction mechanism, novel fold, fivefold pseudosymmetry; 1.90A {Homo sapiens} SCOP: d.126.1.2 PDB: 2jdw_A 3jdw_A* 4jdw_A* 8jdw_A 5jdw_A 6jdw_A* 1jdx_A* 7jdw_A 9jdw_A* 2jdx_A | Back alignment and structure |
|---|
| >2ewo_A Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, structural genomics, PSI, protein structure initiative; 2.90A {Streptococcus mutans} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >2ewo_A Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, structural genomics, PSI, protein structure initiative; 2.90A {Streptococcus mutans} SCOP: d.126.1.6 | Back alignment and structure |
|---|
| >3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A | Back alignment and structure |
|---|
| >3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 137 | |||
| d1h70a_ | 255 | Dimethylarginine dimethylaminohydrolase DDAH {Pseu | 99.67 | |
| d1s9ra_ | 409 | Arginine deiminase {Mycoplasma arginini [TaxId: 20 | 99.53 | |
| d1rxxa_ | 412 | Arginine deiminase {Pseudomonas aeruginosa [TaxId: | 99.52 | |
| d1bwda_ | 348 | L-arginine: inosamine-phosphate amidinotransferase | 99.31 | |
| d1jdwa_ | 360 | L-arginine: glycine amidinotransferase {Human (Hom | 98.36 | |
| d1zbra1 | 339 | Putative peptidyl-arginine deiminase {Porphyromona | 94.46 | |
| d1xkna_ | 353 | Putative peptidyl-arginine deiminase {Chlorobium t | 91.7 | |
| d2jera1 | 364 | Agmatine iminohydrolase {Enterococcus faecalis [Ta | 90.16 | |
| d2ewoa1 | 369 | Agmatine iminohydrolase {Streptococcus mutans [Tax | 83.39 | |
| d2cmua1 | 330 | Putative peptidyl-arginine deiminase {Helicobacter | 80.61 |
| >d1h70a_ d.126.1.3 (A:) Dimethylarginine dimethylaminohydrolase DDAH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Dimethylarginine dimethylaminohydrolase DDAH domain: Dimethylarginine dimethylaminohydrolase DDAH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.67 E-value=7.1e-17 Score=124.77 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=89.1
Q ss_pred ccccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee------ecCccccHHHHHHHHHhCC
Q psy958 16 RFDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT------GISKWTNEKGARAVADSFP 88 (137)
Q Consensus 16 ~~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t------GlS~RTN~eGa~~La~~fp 88 (137)
.+++.++++ ++ .++|++|...++.+++ +++.+.+..++.+ +++||||++++ |.|.|||.+|+++|++.|+
T Consensus 71 ~~~~~~i~~-~~~~~~R~~E~~~~~~~~~-~~~~~~~~~~~~~-~~~eGgd~~~~~~~~~~g~~~rtn~~g~e~l~~~~~ 147 (255)
T d1h70a_ 71 CTSRCAIIT-RPGAESRRGETEIIEETVQ-RFYPGKVERIEAP-GTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILE 147 (255)
T ss_dssp ECSSCEEEC-BCSSGGGTTHHHHHHHHHH-HHSTTCEEECCTT-CCBCGGGEEEETTEEEEEECSSSCHHHHHHHHHHHH
T ss_pred EECCCEEEe-cccchhhhchhhHHHHHHH-HcCCCeeeecccc-cccCCCcceeeccceeEEeeccchHHHHHHHHHHHH
Confidence 456667777 66 7999999999999999 8888845666765 99999999988 9999999999999999998
Q ss_pred --CCCeEEEeCCCCCCCccccccccCCeEEEEcC
Q psy958 89 --EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQ 120 (137)
Q Consensus 89 --~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~ 120 (137)
+|.++.++.+..+||||++++++++.+++...
T Consensus 148 ~~~~~~~~~~~~~~~Hld~~~~~~~~~~~l~~~~ 181 (255)
T d1h70a_ 148 KHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGE 181 (255)
T ss_dssp HTTCEEEEEECSSSSSGGGSEEECSTTEEEECGG
T ss_pred hcCcEEEEecccccccccceeeecCCCceeeCHh
Confidence 67888888889999999999999999988754
|
| >d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini [TaxId: 2094]} | Back information, alignment and structure |
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| >d1rxxa_ d.126.1.4 (A:) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1bwda_ d.126.1.2 (A:) L-arginine: inosamine-phosphate amidinotransferase {Streptomyces griseus [TaxId: 1911]} | Back information, alignment and structure |
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| >d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zbra1 d.126.1.6 (A:3-341) Putative peptidyl-arginine deiminase {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
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| >d1xkna_ d.126.1.6 (A:) Putative peptidyl-arginine deiminase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
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| >d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d2ewoa1 d.126.1.6 (A:2-370) Agmatine iminohydrolase {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
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| >d2cmua1 d.126.1.6 (A:3-332) Putative peptidyl-arginine deiminase {Helicobacter pylori J99 [TaxId: 85963]} | Back information, alignment and structure |
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