Psyllid ID: psy968

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MFSPAVCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQSSLSRPTNKNSTNDHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEcccccccccccEEEEccccccccccccccccEEEcccccHHHHHHHHHHHcccEEEccccccHHHHHHHHcccccccccccEEEcccHHHccc
Secondary Structure Prediction (SSPRO)
cccccEEEcccccEEcccccEcccHHHHHHHHHHHHcccEEccccccHHHHHHHHcEEEEEcccccEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEcHHHHHcccccccccccccccEEEcccccccEEEcccccHHHHHHHHHHHHcccEEccccccHHHHHHHHcEEEEcccccEEEEHHHHHHHcc
Coil and Loop (DISEMBL)
mfspavckcrrpkifktgqLFCKSFKVFRAILDYYkgqvikcppsvsvQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMvnsaqrgdrecHVVVLLdddtvdwdeayppqmgeeysqsslsrptnknstndhtssgantiptseervtlvvdntrfvldpalftaypntmlgrmfssgrefthtndrgeyevaegiPAAVFRAILDYYkgqvikcppsvsvQELREACDYLlvpfdahtvrcqnlrrkvff
Flexible Loop (DISEMBL)
mfspavckcrrpkifktgqlfCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQSSLSRPTNknstndhtssgantiptseerVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Low Complexity Region (SEG)
MFSPAVCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHvvvlldddtvdWDEAYPPQMGEEYSQSSLSRPTNKNSTNDHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Disordered region (IsUnstruct)
*****VCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEA***************************************RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRR****
Disordered Region (DISOPRED)
*************IFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMG************************************LVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Disordered Region (DISEMBL)
MFSPAVCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQM***************************TIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Disordered Region (DISPRO)
*FSPAVCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMG*******************************EERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSPAVCKCRRPKIFKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQSSLSRPTNKNSTNDHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRKVFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q7Z5Y7	419	BTB/POZ domain-containing	yes	N/A	0.415	0.269	0.608	4e-39
Q8CDD8	419	BTB/POZ domain-containing	yes	N/A	0.415	0.269	0.608	5e-39
Q9BSF8	475	BTB/POZ domain-containing	no	N/A	0.419	0.24	0.632	3e-37
Q5R585	475	BTB/POZ domain-containing	no	N/A	0.419	0.24	0.632	3e-37
Q80X66	475	BTB/POZ domain-containing	no	N/A	0.419	0.24	0.623	4e-37

>sp|Q7Z5Y7|KCD20_HUMAN BTB/POZ domain-containing protein KCTD20 OS=Homo sapiens GN=KCTD20 PE=1 SV=1

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 92/115 (80%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFR +LDYYK  +I CP  +S+ +LR+ CDYL + FD +T+RCQ+L  LLHELSN+G
Sbjct: 171 SATVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDG 230

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQ 138
           A  QF+ +LE+LILP+MV  A++G+RECH+VVL D+D+VDWDE +PP MGEEYSQ
Sbjct: 231 AHKQFDHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQ 285

Homo sapiens (taxid: 9606)

>sp|Q8CDD8|KCD20_MOUSE BTB/POZ domain-containing protein KCTD20 OS=Mus musculus GN=Kctd20 PE=2 SV=1

 Score =  161 bits (407), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 92/115 (80%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFR +LDYYK  +I CP  +S+ +LR+ CDYL + FD +T+RCQ+L  LLHELSN+G
Sbjct: 171 SATVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDG 230

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQ 138
           A  QF+ +LE+LILP+MV  A++G+RECH+VVL D+D+VDWDE +PP MGEEYSQ
Sbjct: 231 AHKQFDHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQ 285

Mus musculus (taxid: 10090)

>sp|Q9BSF8|BTBDA_HUMAN BTB/POZ domain-containing protein 10 OS=Homo sapiens GN=BTBD10 PE=1 SV=2

 Score =  155 bits (392), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 93/117 (79%), Gaps = 3/117 (2%)

Query: 152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
           ++   GA  I TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct: 154 ENAKEGARNIRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query: 210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
           EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct: 213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

Homo sapiens (taxid: 9606)

>sp|Q5R585|BTBDA_PONAB BTB/POZ domain-containing protein 10 OS=Pongo abelii GN=BTBD10 PE=2 SV=1

 Score =  155 bits (392), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 93/117 (79%), Gaps = 3/117 (2%)

Query: 152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
           ++   GA  I TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct: 154 ENAKEGARNIRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query: 210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
           EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct: 213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

Pongo abelii (taxid: 9601)

>sp|Q80X66|BTBDA_MOUSE BTB/POZ domain-containing protein 10 OS=Mus musculus GN=Btbd10 PE=1 SV=1

 Score =  155 bits (391), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/117 (62%), Positives = 93/117 (79%), Gaps = 3/117 (2%)

Query: 152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
           ++   GA  + TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct: 154 ENAKEGARNVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query: 210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
           EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct: 213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
380019765	1446	PREDICTED: uncharacterized protein LOC10	0.389	0.073	0.879	5e-57
328777912	1445	PREDICTED: hypothetical protein LOC40932	0.400	0.075	0.879	6e-57
383866027	1447	PREDICTED: uncharacterized protein LOC10	0.382	0.071	0.879	7e-57
307204936	1466	BTB/POZ domain-containing protein 10 [Ha	0.400	0.074	0.879	9e-57
322778866	424	hypothetical protein SINV_11545 [Solenop	0.426	0.273	0.879	2e-56
332024261	442	BTB/POZ domain-containing protein 10 [Ac	0.382	0.235	0.879	2e-56
193671711	444	PREDICTED: BTB/POZ domain-containing pro	0.419	0.256	0.870	3e-56
307185945	499	BTB/POZ domain-containing protein 10 [Ca	0.426	0.232	0.879	4e-56
357627720	326	hypothetical protein KGM_13331 [Danaus p	0.419	0.349	0.834	5e-54
195125123	449	GI12605 [Drosophila mojavensis] gi|19391	0.426	0.258	0.836	8e-52

>gi|380019765|ref|XP_003693773.1| PREDICTED: uncharacterized protein LOC100868801 [Apis florea]

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 111/116 (95%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAILDYYKG VI+CPP+V+VQELREACDYLLVPFDA+TV+CQNLRGLLHELSNEG
Sbjct: 215 SAMVFRAILDYYKGGVIRCPPTVAVQELREACDYLLVPFDANTVKCQNLRGLLHELSNEG 274

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 275 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDIVDWDEEYPPQMGEEYSQT 330

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777912|ref|XP_392840.3| PREDICTED: hypothetical protein LOC409323 [Apis mellifera]

 Score =  226 bits (577), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 111/116 (95%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAILDYYKG VI+CPP+V+VQELREACDYLLVPFDA+TV+CQNLRGLLHELSNEG
Sbjct: 215 SAMVFRAILDYYKGGVIRCPPTVAVQELREACDYLLVPFDANTVKCQNLRGLLHELSNEG 274

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 275 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDIVDWDEEYPPQMGEEYSQT 330

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866027|ref|XP_003708473.1| PREDICTED: uncharacterized protein LOC100883304 [Megachile rotundata]

 Score =  226 bits (577), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAILDYYKG VI+CPP+V+VQELREACDYLLVPFDA TV+CQNLRGLLHELSNEG
Sbjct: 217 SAMVFRAILDYYKGGVIRCPPTVAVQELREACDYLLVPFDASTVKCQNLRGLLHELSNEG 276

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 277 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDIVDWDEEYPPQMGEEYSQT 332

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204936|gb|EFN83475.1| BTB/POZ domain-containing protein 10 [Harpegnathos saltator]

 Score =  226 bits (576), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAIL+YYKG VI+CPP+VSVQELREACDYLLVPFDA TV+CQNLRGLLHELSNEG
Sbjct: 235 SAMVFRAILEYYKGNVIRCPPTVSVQELREACDYLLVPFDASTVKCQNLRGLLHELSNEG 294

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 295 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDVVDWDEEYPPQMGEEYSQT 350

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322778866|gb|EFZ09282.1| hypothetical protein SINV_11545 [Solenopsis invicta]

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAIL+YYKG VI+CPP+VSVQELREACDYLLVPFDA TV+CQNLRGLLHELSNEG
Sbjct: 174 SAMVFRAILEYYKGGVIRCPPTVSVQELREACDYLLVPFDASTVKCQNLRGLLHELSNEG 233

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 234 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDVVDWDEEYPPQMGEEYSQT 289

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024261|gb|EGI64465.1| BTB/POZ domain-containing protein 10 [Acromyrmex echinatior]

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAIL+YYKG VI+CPP+VSVQELREACDYLLVPFDA TV+CQNLRGLLHELSNEG
Sbjct: 174 SAMVFRAILEYYKGGVIRCPPTVSVQELREACDYLLVPFDASTVKCQNLRGLLHELSNEG 233

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 234 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDVVDWDEEYPPQMGEEYSQT 289

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193671711|ref|XP_001951382.1| PREDICTED: BTB/POZ domain-containing protein 10-like isoform 4 [Acyrthosiphon pisum] gi|328705727|ref|XP_003242889.1| PREDICTED: BTB/POZ domain-containing protein 10-like isoform 2 [Acyrthosiphon pisum] gi|328705730|ref|XP_003242890.1| PREDICTED: BTB/POZ domain-containing protein 10-like isoform 3 [Acyrthosiphon pisum]

 Score =  224 bits (571), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 101/116 (87%), Positives = 108/116 (93%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFR IL+YYKG V++CP S+SVQELREACDYLL+PFDA TV+CQNLRGLLHELSNEG
Sbjct: 174 SANVFRCILEYYKGNVMRCPSSISVQELREACDYLLIPFDAKTVKCQNLRGLLHELSNEG 233

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDD VDWDE YPPQMGEEYSQ+
Sbjct: 234 ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDIVDWDEEYPPQMGEEYSQT 289

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185945|gb|EFN71747.1| BTB/POZ domain-containing protein 10 [Camponotus floridanus]

 Score =  224 bits (570), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAIL+YYKG VI+CPP+VSVQELREACDYLLVPFDA TV+CQNLRGLLHELSNEG
Sbjct: 231 SAMVFRAILEYYKGGVIRCPPTVSVQELREACDYLLVPFDASTVKCQNLRGLLHELSNEG 290

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           ARCQFEVFLEDLILPLMVNSA+RGDRECH+VVLL+DD VDWDE YPPQMGEEYSQ+
Sbjct: 291 ARCQFEVFLEDLILPLMVNSARRGDRECHIVVLLEDDVVDWDEEYPPQMGEEYSQT 346

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627720|gb|EHJ77322.1| hypothetical protein KGM_13331 [Danaus plexippus]

 Score =  217 bits (552), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 110/121 (90%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFRAIL+YY+G  I+CPP+VSVQELREACDYLLVPFDA+TVRCQNLRGLLHELSNEG
Sbjct: 88  SATVFRAILEYYRGGTIRCPPTVSVQELREACDYLLVPFDANTVRCQNLRGLLHELSNEG 147

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQSSLSR 143
           AR QFE FLE LILPLMV SA+RGDRECHVVVLLDDD+VDWDE YPPQMG+EYSQ+ LS 
Sbjct: 148 ARRQFESFLERLILPLMVESAERGDRECHVVVLLDDDSVDWDEQYPPQMGDEYSQTVLST 207

Query: 144 P 144
           P
Sbjct: 208 P 208

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195125123|ref|XP_002007032.1| GI12605 [Drosophila mojavensis] gi|193918641|gb|EDW17508.1| GI12605 [Drosophila mojavensis]

 Score =  209 bits (533), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 105/116 (90%)

Query: 24  SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
           S  VFR+IL+YYK  VI+CPP+VSV EL+EACDYLL+PFDA TVRCQNLRGLLHELSNEG
Sbjct: 161 SHLVFRSILEYYKSGVIRCPPTVSVPELKEACDYLLIPFDATTVRCQNLRGLLHELSNEG 220

Query: 84  ARCQFEVFLEDLILPLMVNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQS 139
           AR QFEVFLEDLILPLMV SAQRGDRECHVVVLLDDD VDWDE +PPQMGEEY Q+
Sbjct: 221 ARQQFEVFLEDLILPLMVASAQRGDRECHVVVLLDDDMVDWDEEFPPQMGEEYCQT 276

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
FB|FBgn0035107	439	mri "mrityu" [Drosophila melan	0.426	0.264	0.75	2.8e-43
UNIPROTKB|B7Z228	483	BTBD10 "BTB/POZ domain-contain	0.419	0.236	0.632	2.1e-36
UNIPROTKB|B7Z503	427	BTBD10 "cDNA FLJ58599, highly	0.419	0.266	0.632	2.1e-36
UNIPROTKB|Q9BSF8	475	BTBD10 "BTB/POZ domain-contain	0.419	0.24	0.632	2.1e-36
RGD|1306301	427	Btbd10 "BTB (POZ) domain conta	0.419	0.266	0.623	2.1e-36
UNIPROTKB|F1M6Z2	475	Btbd10 "Protein Btbd10" [Rattu	0.419	0.24	0.623	2.1e-36
UNIPROTKB|Q0VCV8	483	BTBD10 "Uncharacterized protei	0.419	0.236	0.623	2.7e-36
UNIPROTKB|E2R0Z7	483	BTBD10 "Uncharacterized protei	0.419	0.236	0.623	2.7e-36
UNIPROTKB|F1S980	483	BTBD10 "Uncharacterized protei	0.419	0.236	0.623	2.7e-36
MGI|MGI:1916065	475	Btbd10 "BTB (POZ) domain conta	0.419	0.24	0.623	2.7e-36

FB|FBgn0035107 mri "mrityu" [Drosophila melanogaster (taxid:7227)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 87/116 (75%), Positives = 95/116 (81%)

Query:    24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83
             S  VFRAIL+YYK  VI+CPP+VSV EL+EACDYLL+PFDA TVRCQNLRGLLHELSNEG
Sbjct:   148 SHLVFRAILEYYKSGVIRCPPTVSVPELKEACDYLLIPFDATTVRCQNLRGLLHELSNEG 207

Query:    84 ARCQFEVFLEDLILPLMVNSAQRGDRECHXXXXXXXXXXXWDEAYPPQMGEEYSQS 139
             AR QFE+FLEDLILPLMV SAQRGDRECH           WDE +PPQMGEEY Q+
Sbjct:   208 ARQQFELFLEDLILPLMVASAQRGDRECHVVVLLEDDMVEWDEEFPPQMGEEYCQT 263

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0004370 "glycerol kinase activity" evidence=IKR

GO:0046331 "lateral inhibition" evidence=IMP

GO:0050975 "sensory perception of touch" evidence=IMP

UNIPROTKB|B7Z228 BTBD10 "BTB/POZ domain-containing protein 10" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 74/117 (63%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  I TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   162 ENAKEGARNIRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 220

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   221 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 277

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|B7Z503 BTBD10 "cDNA FLJ58599, highly similar to BTB/POZ domain-containing protein 10" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 74/117 (63%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  I TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   106 ENAKEGARNIRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 164

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   165 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 221

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q9BSF8 BTBD10 "BTB/POZ domain-containing protein 10" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 74/117 (63%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  I TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   154 ENAKEGARNIRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

RGD|1306301 Btbd10 "BTB (POZ) domain containing 10" [Rattus norvegicus (taxid:10116)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 73/117 (62%), Positives = 94/117 (80%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA ++ TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   106 ENAKEGARSVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 164

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   165 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 221

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|F1M6Z2 Btbd10 "Protein Btbd10" [Rattus norvegicus (taxid:10116)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 73/117 (62%), Positives = 94/117 (80%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA ++ TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   154 ENAKEGARSVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q0VCV8 BTBD10 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 73/117 (62%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  + TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   162 ENAKEGARNVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 220

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   221 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 277

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2R0Z7 BTBD10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 73/117 (62%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  + TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   162 ENAKEGARNVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 220

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   221 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 277

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1S980 BTBD10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 73/117 (62%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  + TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   162 ENAKEGARNVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 220

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   221 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 277

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

MGI|MGI:1916065 Btbd10 "BTB (POZ) domain containing 10" [Mus musculus (taxid:10090)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 73/117 (62%), Positives = 93/117 (79%)

Query:   152 DHTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE--FTHTNDRG 209
             ++   GA  + TSE RVTL+VDNTRFV+DP++FTA PNTMLGRMF SGRE  FT  N++G
Sbjct:   154 ENAKEGARNVRTSE-RVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKG 212

Query:   210 EYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNL 266
             EYEVAEGI + VFRAILDYYK  +I+CP  +S+ ELREACDYL + F+  T++C++L
Sbjct:   213 EYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDL 269

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8CDD8	KCD20_MOUSE	No assigned EC number	0.6086	0.4154	0.2696	yes	N/A
Q7Z5Y7	KCD20_HUMAN	No assigned EC number	0.6086	0.4154	0.2696	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	272
smart00225	97	smart00225, BTB, Broad-Complex, Tramtrack and Bric	7e-05

>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac

 Score = 40.4 bits (95), Expect = 7e-05
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 168 VTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILD 227
           VTLVV   +F    A+  A+         S  +E   +    E  + + +    FRA+L+
Sbjct: 2   VTLVVGGKKFHAHKAVLAAHSPYFKALFSSDFKESDKS----EIYL-DDVSPEDFRALLN 56

Query: 228 Y-YKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRR 268
           + Y G++    P  +V+EL E  DYL +P          L+ 
Sbjct: 57  FLYTGKLD--LPEENVEELLELADYLQIPGLVELCEEFLLKL 96

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG3840|consensus	438		100.0
KOG3713|consensus	477		99.93
KOG4390|consensus	632		99.92
PF02214	94	BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi	99.91
KOG3840|consensus	438		99.83
KOG1545|consensus	507		99.75
KOG1665|consensus	302		99.7
KOG2723|consensus	221		99.68
KOG2714|consensus	465		99.65
KOG2715|consensus	210		99.6
KOG2716|consensus	230		99.57
smart00225	90	BTB Broad-Complex, Tramtrack and Bric a brac. Doma	98.68
PHA03098	534	kelch-like protein; Provisional	97.38
PHA02790	480	Kelch-like protein; Provisional	97.31
PF00651	111	BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (	96.92
PHA02713	557	hypothetical protein; Provisional	96.74
PF02214	94	BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi	96.66
KOG4441|consensus	571		96.35
smart00225	90	BTB Broad-Complex, Tramtrack and Bric a brac. Doma	93.8
KOG3713|consensus	477		93.43
PHA02713	557	hypothetical protein; Provisional	83.71
KOG1665|consensus	302		82.67

>KOG3840|consensus

Probab=100.00  E-value=2.8e-74  Score=538.97  Aligned_cols=156  Identities=58%  Similarity=0.966  Sum_probs=149.3

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccccchHHHHHHhhchhhHHHHHHHHHHHhHHHH
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILPLM  100 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~~l~~llhelsn~ga~~~f~~fl~~~i~p~m  100 (272)
                      .||+++||||||||||+|+|+||++|||+||||||||||||||++|||||||++|||||||+|||+||+.|||++|||+|
T Consensus       145 dGi~s~vFRAILdYYksG~iRCP~~vSvpELrEACDYLlipF~a~TvkCqnL~aLlHELSNeGAR~QFe~fLEe~ILPLM  224 (438)
T KOG3840|consen  145 DGMTSSCFRAILDYYQSGTMRCPSSVSVSELREACDYLLVPFNAQTVKCQNLHALLHELSNEGAREQFSQFLEEIILPLM  224 (438)
T ss_pred             cchhHHHHHHHHHHHhcCceeCCCCCchHHHHhhcceEEeecccceeeehhHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccCCceeEEEEecCCCccccCCCCCCCCcccccccccCcccC--------CCCCC--------CCCCCCCCCCCCC
Q psy968          101 VNSAQRGDRECHVVVLLDDDTVDWDEAYPPQMGEEYSQSSLSRPTN--------KNSTN--------DHTSSGANTIPTS  164 (272)
Q Consensus       101 v~~a~~g~rechivvl~~~d~v~wd~~~pp~mgEe~~qivySt~ln--------k~~~k--------~~~~~G~~~~p~~  164 (272)
                      |.+||+||||||||||+|||+|||||+|||||||||+|+||||+||        ++.+|        +||+.|++++|+-
T Consensus       225 VASAQ~GeRECHiVVLldDDvVdWDEEyPPQMGEEY~Q~vyST~lyRFFKYIENRDVAKqVlKeRGLKKIRlGIEGYPTh  304 (438)
T KOG3840|consen  225 VASAQHGERECHLVVLLDDDVVDWDEEYPPQMGEEYTQVVYSTHLYRFFKYIENRDVAKQVLKERGLKKIRLGIEGYPTH  304 (438)
T ss_pred             HHhhhcCCceeEEEEEecCccccccccCCcccchhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHhChhhEeeccccCcch
Confidence            9999999999999999999999999999999999999999999999        22222        2999999999999


Q ss_pred             CCcEEEeeCCeE
Q psy968          165 EERVTLVVDNTR  176 (272)
Q Consensus       165 ~~rV~LNVGG~r  176 (272)
                      .++|.-.-||+-
T Consensus       305 KEKikkRPGGRa  316 (438)
T KOG3840|consen  305 KEKIKKRPGGRA  316 (438)
T ss_pred             HHHhhcCCCCCc
Confidence            999999999974

>KOG3713|consensus

Probab=99.93  E-value=4.6e-26  Score=222.89  Aligned_cols=101  Identities=23%  Similarity=0.321  Sum_probs=93.9

Q ss_pred             CCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCc-----cc--CCCCCCcEEeccCCCccchHHHHhhHhCCeee
Q psy968          163 TSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGRE-----FT--HTNDRGEYEVAEGIPAAVFRAILDYYKGQVIK  235 (272)
Q Consensus       163 ~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~-----~~--~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh  235 (272)
                      +.+.+|+|||||.||++.++||.++|.|+||++..+..+     .|  ||+.++||||||  ||.+|.+|||||||||||
T Consensus        28 ~~~~~i~lNVGG~r~~l~~~tL~~~P~TRL~rL~~~~~~~~~l~~cDdyd~~~~EyfFDR--~P~~F~~Vl~fYrtGkLH  105 (477)
T KOG3713|consen   28 ALDRRVRLNVGGTRHELYWSTLKRFPLTRLGRLADCNSHEERLELCDDYDPVTNEYFFDR--HPGAFAYVLNFYRTGKLH  105 (477)
T ss_pred             CcCcEEEEeeCCeeEEehHHHHhhCchhHHHHHHhcccchhhhhhccccCcccCeeeecc--ChHHHHHHHHHHhcCeec
Confidence            456799999999999999999999999999999875521     23  899999999999  999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhcCCCCCCccccccc
Q psy968          236 CPPSVSVQELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       236 ~P~~vc~~~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      +|.++|+..|.||++||||+....+.||+.
T Consensus       106 ~p~~vC~~~F~eEL~yWgI~~~~le~CC~~  135 (477)
T KOG3713|consen  106 VPADVCPLSFEEELDYWGIDEAHLESCCWM  135 (477)
T ss_pred             cccccchHHHHHHHHHhCCChhhhhHHhHH
Confidence            999999999999999999999999999975

>KOG4390|consensus

Probab=99.92  E-value=2.4e-26  Score=222.14  Aligned_cols=97  Identities=25%  Similarity=0.431  Sum_probs=92.7

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQ  243 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~  243 (272)
                      .++.++|||+|+||+||+.||.+||||+||+   +.++++|++++|||||||  ||++||+||||||||+||+|...|+.
T Consensus        38 ~De~lvlNvSGrRFeTWknTLeryPdTLLGS---sEkeFFy~~dt~eYFFDR--DPdiFRhvLnFYRTGkLHyPR~ECi~  112 (632)
T KOG4390|consen   38 QDELLVLNVSGRRFETWKNTLERYPDTLLGS---SEKEFFYDEDTGEYFFDR--DPDIFRHVLNFYRTGKLHYPRHECIS  112 (632)
T ss_pred             cCcEEEEeccccchhHHHhHHHhCchhhhCC---cchheeecCCcccccccC--ChHHHHHHHHHhhcCcccCchHHHHH
Confidence            5789999999999999999999999999996   667788999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCccccccc
Q psy968          244 ELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       244 ~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      .+-||+.||||-++....||..
T Consensus       113 AyDeELaF~Gl~PeligDCCyE  134 (632)
T KOG4390|consen  113 AYDEELAFYGLVPELIGDCCYE  134 (632)
T ss_pred             HhhhhhhHhcccHHHHhhhhhH
Confidence            9999999999999999999964

>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=99.91  E-value=2.2e-25  Score=171.78  Aligned_cols=92  Identities=27%  Similarity=0.428  Sum_probs=76.8

Q ss_pred             EEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCCCHHHHH
Q psy968          168 VTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSVSVQELR  246 (272)
Q Consensus       168 V~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~vc~~~f~  246 (272)
                      |+|||||++|+|+++||.++|+|+|++|++.+....+++++|+|||||  ||.+|++||+|||+ |+|+.|.+.+...|.
T Consensus         1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fiDR--dp~~F~~IL~ylr~~~~l~~~~~~~~~~l~   78 (94)
T PF02214_consen    1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFIDR--DPELFEYILNYLRTGGKLPIPDEICLEELL   78 (94)
T ss_dssp             EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEESS---HHHHHHHHHHHHHTSSB---TTS-HHHHH
T ss_pred             CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEecc--ChhhhhHHHHHHhhcCccCCCCchhHHHHH
Confidence            789999999999999999999999999998652224678899999999  99999999999999 899999899999999


Q ss_pred             HHHHhcCCCCCCccc
Q psy968          247 EACDYLLVPFDAHTV  261 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~  261 (272)
                      +||+||+|+....+.
T Consensus        79 ~Ea~fy~l~~l~i~~   93 (94)
T PF02214_consen   79 EEAEFYGLDELFIED   93 (94)
T ss_dssp             HHHHHHT-HHHHBHH
T ss_pred             HHHHHcCCCccccCC
Confidence            999999997654443

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....

>KOG3840|consensus

Probab=99.83  E-value=4.6e-21  Score=181.08  Aligned_cols=117  Identities=53%  Similarity=0.934  Sum_probs=109.4

Q ss_pred             CCCCCCCCCCCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCC
Q psy968          153 HTSSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQ  232 (272)
Q Consensus       153 ~~~~G~~~~p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTG  232 (272)
                      ..+.|+-..|+..+++++-|+|.+|.+.+..|+.+|+||||+||+.+..+...+++|||-+..||...+||+||+||+||
T Consensus        83 ~~~s~~G~~pg~~~~~t~lvd~~rf~v~q~llt~~p~Tmlg~mf~~g~~f~~pNErgEyeVAdGi~s~vFRAILdYYksG  162 (438)
T KOG3840|consen   83 MLMSQLGCSPGEGDKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMGADLVSPNERDEFEVADGMTSSCFRAILDYYQSG  162 (438)
T ss_pred             hhhhhcCCCCCCCcceEEEeeeEEEEeeeeeecCCcchhhhhhhcccccccCCCcCCceehhcchhHHHHHHHHHHHhcC
Confidence            34445556788899999999999999999999999999999999998877788999999999999999999999999999


Q ss_pred             eeecCCCCCHHHHHHHHHhcCCCCCCccccccccccc
Q psy968          233 VIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRRK  269 (272)
Q Consensus       233 kLh~P~~vc~~~f~eE~~Ff~Ip~~~~~~cC~~l~~~  269 (272)
                      .++||+++++.+++|+++|..|||++.|++||||++-
T Consensus       163 ~iRCP~~vSvpELrEACDYLlipF~a~TvkCqnL~aL  199 (438)
T KOG3840|consen  163 TMRCPSSVSVSELREACDYLLVPFNAQTVKCQNLHAL  199 (438)
T ss_pred             ceeCCCCCchHHHHhhcceEEeecccceeeehhHHHH
Confidence            9999999999999999999999999999999999863

>KOG1545|consensus

Probab=99.75  E-value=2.1e-19  Score=172.71  Aligned_cols=94  Identities=26%  Similarity=0.348  Sum_probs=83.9

Q ss_pred             CCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCC
Q psy968          162 PTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSV  240 (272)
Q Consensus       162 p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~v  240 (272)
                      +..+++|+|||+|.||+|..+||.+||+|+||.--.  +..++|+.++||||||  +...|.+||.||++ |+|+.|.++
T Consensus        57 ~~~~ervvINisGlRFeTql~TL~qfP~TLLGDp~k--R~rfFdplrNEyFFDR--nRpSFdaILYyYQSGGRlrRPvnV  132 (507)
T KOG1545|consen   57 SCCCERVVINISGLRFETQLKTLAQFPNTLLGDPAK--RMRFFDPLRNEYFFDR--NRPSFDAILYYYQSGGRLRRPVNV  132 (507)
T ss_pred             cccccEEEEEeccceehHHHHHHhhCchhhcCCHHH--hcccccccchhhcccC--CCCccceEEEEeecCceecCCccc
Confidence            345699999999999999999999999999998422  2346899999999999  99999999999998 799999999


Q ss_pred             CHHHHHHHHHhcCCCCCCc
Q psy968          241 SVQELREACDYLLVPFDAH  259 (272)
Q Consensus       241 c~~~f~eE~~Ff~Ip~~~~  259 (272)
                      +.+.|.+|+.|||+..+.+
T Consensus       133 PlDiF~eEirFyqlG~eam  151 (507)
T KOG1545|consen  133 PLDIFLEEIRFYQLGDEAM  151 (507)
T ss_pred             cHHHHHHHHHHHHhhHHHH
Confidence            9999999999999965543

>KOG1665|consensus

Probab=99.70  E-value=1.7e-17  Score=151.80  Aligned_cols=89  Identities=18%  Similarity=0.352  Sum_probs=83.5

Q ss_pred             CCCcEEEeeCCeEEEechHhhh-cCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968          164 SEERVTLVVDNTRFVLDPALFT-AYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV  242 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~-r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~  242 (272)
                      .+..|.|||||+.|.|+.+||. |.|||||++||+.+-..+..+.+|-|+|||  ||..|+.||||+|.|++.+-.++..
T Consensus         7 ~~~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~lIDR--sp~yFepIlNyLr~Gq~~~~s~i~~   84 (302)
T KOG1665|consen    7 LSSMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAVLIDR--SPKYFEPILNYLRDGQIPSLSDIDC   84 (302)
T ss_pred             hhhhheeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceEEEcc--CchhhHHHHHHHhcCceeecCCccH
Confidence            4578999999999999999995 999999999999875567889999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy968          243 QELREACDYLLV  254 (272)
Q Consensus       243 ~~f~eE~~Ff~I  254 (272)
                      ..+++|++||+|
T Consensus        85 lgvLeeArff~i   96 (302)
T KOG1665|consen   85 LGVLEEARFFQI   96 (302)
T ss_pred             HHHHHHhhHHhh
Confidence            999999999998

>KOG2723|consensus

Probab=99.68  E-value=3.7e-17  Score=147.85  Aligned_cols=90  Identities=23%  Similarity=0.451  Sum_probs=82.2

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCC-H
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVS-V  242 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc-~  242 (272)
                      .++.|.|||||+.|+|...||.++|+|+|++||+.... ..++..|.|||||  |+.+|||||+|+||-++.+|+... .
T Consensus         7 ~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~~~~-~~~d~~g~~fIDR--DG~lFRyvL~~LRt~~l~lpe~f~e~   83 (221)
T KOG2723|consen    7 YPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSGELP-LLRDSKGRYFIDR--DGFLFRYVLDYLRTKALLLPEDFAEV   83 (221)
T ss_pred             cCCceeeccCCeEEEeeccceeechHHHHHhhcCCCCC-ccccccccEEEcC--CcchHHHHHHHhcccccccchhhhhH
Confidence            56899999999999999999999999999999997433 4578999999999  999999999999998899999887 7


Q ss_pred             HHHHHHHHhcCCCC
Q psy968          243 QELREACDYLLVPF  256 (272)
Q Consensus       243 ~~f~eE~~Ff~Ip~  256 (272)
                      ..+.+|++||+++.
T Consensus        84 ~~L~rEA~f~~l~~   97 (221)
T KOG2723|consen   84 ERLVREAEFFQLEA   97 (221)
T ss_pred             HHHHHHHHHHcccc
Confidence            88999999999973

>KOG2714|consensus

Probab=99.65  E-value=1.8e-16  Score=154.36  Aligned_cols=96  Identities=15%  Similarity=0.210  Sum_probs=85.1

Q ss_pred             CCCCCCCcEEEeeCCeEEEechHhhhcCC-CcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCC
Q psy968          160 TIPTSEERVTLVVDNTRFVLDPALFTAYP-NTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPP  238 (272)
Q Consensus       160 ~~p~~~~rV~LNVGG~rF~t~~sTL~r~P-dT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~  238 (272)
                      ..+.+.++|+|||||++|+|++.||+--| ||+|+++++.++... .++.|--||||  ||++|.-||||+|||.|-.+.
T Consensus         5 ~~~~~~~~V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~~~~s~-~~~~~~iFIDR--DPdlFaviLn~LRTg~L~~~g   81 (465)
T KOG2714|consen    5 AMGSSGDRVKLNVGGRIFETSAQTLTWIPRDSFFSALLSGRINSL-KDESGAIFIDR--DPDLFAVILNLLRTGDLDASG   81 (465)
T ss_pred             ccCCCCceEEEecCceEEecchhhhhcCCcchHHHHHhcCccccc-cCCCCceEecC--CchHHHHHHHHHhcCCCCCcc
Confidence            34456799999999999999999999999 999999999876643 48889999999  999999999999999999988


Q ss_pred             CCCHHHHHHHHHhcCCCCCC
Q psy968          239 SVSVQELREACDYLLVPFDA  258 (272)
Q Consensus       239 ~vc~~~f~eE~~Ff~Ip~~~  258 (272)
                      ......+.+|+.||||..-.
T Consensus        82 ~~~~~llhdEA~fYGl~~ll  101 (465)
T KOG2714|consen   82 VFPERLLHDEAMFYGLTPLL  101 (465)
T ss_pred             CchhhhhhhhhhhcCcHHHH
Confidence            77788899999999995543

>KOG2715|consensus

Probab=99.60  E-value=6.6e-16  Score=136.14  Aligned_cols=88  Identities=18%  Similarity=0.337  Sum_probs=81.2

Q ss_pred             CCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcc-cCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968          165 EERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREF-THTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQ  243 (272)
Q Consensus       165 ~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~-~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~  243 (272)
                      +.+|.|||||+.|.|++.||.+.|.+.|.++.+..+.+ +..|++|.|+|||  ||..|..||||+|.|||.+.+ +..+
T Consensus        20 s~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~sdrDetGAYlIDR--DP~~FgpvLNylRhgklvl~~-l~ee   96 (210)
T KOG2715|consen   20 SLWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLPSDRDETGAYLIDR--DPFYFGPVLNYLRHGKLVLNK-LSEE   96 (210)
T ss_pred             eEEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCCCCccccCceEecc--CcchHHHHHHHHhcchhhhhh-hhhh
Confidence            68999999999999999999999999999998766543 3568999999999  999999999999999999988 8888


Q ss_pred             HHHHHHHhcCCC
Q psy968          244 ELREACDYLLVP  255 (272)
Q Consensus       244 ~f~eE~~Ff~Ip  255 (272)
                      ..++|++||.+|
T Consensus        97 GvL~EAefyn~~  108 (210)
T KOG2715|consen   97 GVLEEAEFYNDP  108 (210)
T ss_pred             ccchhhhccCCh
Confidence            999999999998

>KOG2716|consensus

Probab=99.57  E-value=2.6e-15  Score=136.53  Aligned_cols=88  Identities=19%  Similarity=0.350  Sum_probs=78.9

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCC-H
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVS-V  242 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc-~  242 (272)
                      ..+.|.|||||+.|.|+++||+++ |++|..|++.+.. ...+++|-.||||  +|.+|.-||||+|.|...+|+..- .
T Consensus         3 ~~~~vkLnvGG~~F~Tsk~TLtk~-dg~fk~m~e~~i~-~~~d~s~~IFIDR--SpKHF~~ILNfmRdGdv~LPe~~kel   78 (230)
T KOG2716|consen    3 MSETVKLNVGGTIFKTSKSTLTKF-DGFFKTMLETDIP-VEKDESGCIFIDR--SPKHFDTILNFMRDGDVDLPESEKEL   78 (230)
T ss_pred             ccceEEEecCCeEEEeehhhhhhh-hhHHHHHhhcCCc-cccCCcCcEEecC--ChhHHHHHHHhhhcccccCccchHHH
Confidence            347899999999999999999996 8899999998865 3457899999999  999999999999999999999764 6


Q ss_pred             HHHHHHHHhcCCC
Q psy968          243 QELREACDYLLVP  255 (272)
Q Consensus       243 ~~f~eE~~Ff~Ip  255 (272)
                      .+++.||.||+++
T Consensus        79 ~El~~EA~fYlL~   91 (230)
T KOG2716|consen   79 KELLREAEFYLLD   91 (230)
T ss_pred             HHHHHHHHHhhHH
Confidence            7899999999885

>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac

Probab=98.68  E-value=3e-08  Score=71.08  Aligned_cols=82  Identities=29%  Similarity=0.438  Sum_probs=67.2

Q ss_pred             EEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEe-ccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          168 VTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEV-AEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       168 V~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFF-DR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      |+|+|||+.|.+.+.+|...+. ++.+|+.++...   ....++.+ |.  ++.+|+.+|+|+++|++..+.. ....+.
T Consensus         2 v~i~v~~~~~~~h~~iL~~~s~-~f~~~~~~~~~~---~~~~~i~l~~~--~~~~f~~~l~~ly~~~~~~~~~-~~~~l~   74 (90)
T smart00225        2 VTLVVGGKKFKAHKAVLAACSP-YFKALFSGDFKE---SKKSEIYLDDV--SPEDFRALLEFLYTGKLDLPEE-NVEELL   74 (90)
T ss_pred             eEEEECCEEEehHHHHHhhcCH-HHHHHHcCCCcc---CCCCEEEecCC--CHHHHHHHHHeecCceeecCHH-HHHHHH
Confidence            6799999999999999999965 888888765432   13344544 55  9999999999999999988886 678899


Q ss_pred             HHHHhcCCCC
Q psy968          247 EACDYLLVPF  256 (272)
Q Consensus       247 eE~~Ff~Ip~  256 (272)
                      ++++||+++.
T Consensus        75 ~~a~~~~~~~   84 (90)
T smart00225       75 ELADYLQIPG   84 (90)
T ss_pred             HHHHHHCcHH
Confidence            9999999864

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.

>PHA03098 kelch-like protein; Provisional

Probab=97.38  E-value=0.00024  Score=69.46  Aligned_cols=91  Identities=13%  Similarity=0.295  Sum_probs=72.7

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQ  243 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~  243 (272)
                      .+-.|+++|+|+.|...+..|...++ ++.+||++++.      +.+.-+.-  ++.+|+.||+|..||++.+..+ .+.
T Consensus        10 ~Dv~l~~~~~~~~~~~Hk~vLaa~S~-yF~~mf~~~~~------~~~i~l~~--~~~~~~~~l~y~Ytg~~~i~~~-~~~   79 (534)
T PHA03098         10 CDESIIIVNGGGIIKVHKIILSSSSE-YFKKMFKNNFK------ENEINLNI--DYDSFNEVIKYIYTGKINITSN-NVK   79 (534)
T ss_pred             CCEEEEEEcCCEEEEeHHHHHHhhhH-HHHHHHhCCCC------CceEEecC--CHHHHHHHHHHhcCCceEEcHH-HHH
Confidence            45667777899999999999999876 89999987654      34455543  8999999999999999988774 488


Q ss_pred             HHHHHHHhcCCCCCCccccccc
Q psy968          244 ELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       244 ~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      ++++.+++|||+. ....||.-
T Consensus        80 ~ll~~A~~l~~~~-l~~~C~~~  100 (534)
T PHA03098         80 DILSIANYLIIDF-LINLCINY  100 (534)
T ss_pred             HHHHHHHHhCcHH-HHHHHHHH
Confidence            9999999999975 33444443

>PHA02790 Kelch-like protein; Provisional

Probab=97.31  E-value=0.00015  Score=71.10  Aligned_cols=92  Identities=7%  Similarity=-0.029  Sum_probs=72.6

Q ss_pred             EEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEe-ccCCCccchHHHHhhHhCCeeecCCCCCHHHHHH
Q psy968          169 TLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEV-AEGIPAAVFRAILDYYKGQVIKCPPSVSVQELRE  247 (272)
Q Consensus       169 ~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFF-DR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~e  247 (272)
                      +|-|.|..|...+..|....+ ++.+||++++.+..    .+-.+ ..||++.+++.||+|..||+|.+.. ..++.+++
T Consensus        25 ~~~~~~~~~~~HR~VLAa~S~-YFraMF~~~~~Es~----~~v~~~~~~v~~~~l~~lldy~YTg~l~it~-~nV~~ll~   98 (480)
T PHA02790         25 IIEAIGGNIIVNSTILKKLSP-YFRTHLRQKYTKNK----DPVTRVCLDLDIHSLTSIVIYSYTGKVYIDS-HNVVNLLR   98 (480)
T ss_pred             EEEEcCcEEeeehhhhhhcCH-HHHHHhcCCccccc----cceEEEecCcCHHHHHHHHHhheeeeEEEec-ccHHHHHH
Confidence            455677899999999999876 99999998865332    23332 2488999999999999999999987 57999999


Q ss_pred             HHHhcCCCCCCccccccccc
Q psy968          248 ACDYLLVPFDAHTVRCQNLR  267 (272)
Q Consensus       248 E~~Ff~Ip~~~~~~cC~~l~  267 (272)
                      .+.++||+ .....||+=|.
T Consensus        99 aA~~Lqi~-~v~~~C~~fL~  117 (480)
T PHA02790         99 ASILTSVE-FIIYTCINFIL  117 (480)
T ss_pred             HHHHhChH-HHHHHHHHHHH
Confidence            99999997 34555655443

>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins

Probab=96.92  E-value=0.0022  Score=49.01  Aligned_cols=86  Identities=22%  Similarity=0.347  Sum_probs=64.3

Q ss_pred             CcEEEeeC-CeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEec-cCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968          166 ERVTLVVD-NTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVA-EGIPAAVFRAILDYYKGQVIKCPPSVSVQ  243 (272)
Q Consensus       166 ~rV~LNVG-G~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFD-R~idp~vFr~ILnYYRTGkLh~P~~vc~~  243 (272)
                      --++|.|+ |.+|.+.+..|..... ++.+|+.+.    +..+++.--+. .++++..|+.+|+|..+|.+..+......
T Consensus        11 ~D~~i~v~d~~~~~vhk~iL~~~S~-~F~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~   85 (111)
T PF00651_consen   11 SDVTIRVGDGKTFYVHKNILAARSP-YFRNLFEGS----KFKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINSDENVE   85 (111)
T ss_dssp             --EEEEETTTEEEEE-HHHHHHHBH-HHHHHHTTT----TSTTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-TTTHH
T ss_pred             CCEEEEECCCEEEeechhhhhccch-hhhhccccc----ccccccccccccccccccccccccccccCCcccCCHHHHHH
Confidence            45889999 9999999999988754 999998865    11222222332 45799999999999999999887335588


Q ss_pred             HHHHHHHhcCCCC
Q psy968          244 ELREACDYLLVPF  256 (272)
Q Consensus       244 ~f~eE~~Ff~Ip~  256 (272)
                      .+.+-+++|+++.
T Consensus        86 ~ll~lA~~~~~~~   98 (111)
T PF00651_consen   86 ELLELADKLQIPE   98 (111)
T ss_dssp             HHHHHHHHTTBHH
T ss_pred             HHHHHHHHhCcHH
Confidence            8999999999864

The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....

>PHA02713 hypothetical protein; Provisional

Probab=96.74  E-value=0.0016  Score=65.50  Aligned_cols=93  Identities=13%  Similarity=0.209  Sum_probs=71.3

Q ss_pred             cEEEeeC-CeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          167 RVTLVVD-NTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       167 rV~LNVG-G~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      -|+|.|+ |+.|...+..|....+ ++.+||++++...  ...++--+ .||++.+|+.||+|..||++  ++ ..++.+
T Consensus        27 DV~L~v~~~~~f~~Hr~vLaa~S~-YF~amF~~~~~e~--~~~~~v~l-~~v~~~~~~~ll~y~Yt~~i--~~-~nv~~l   99 (557)
T PHA02713         27 DVIITIGDGEEIKAHKTILAAGSK-YFRTLFTTPMIIR--DLVTRVNL-QMFDKDAVKNIVQYLYNRHI--SS-MNVIDV   99 (557)
T ss_pred             CEEEEeCCCCEEeehHHHHhhcCH-HHHHHhcCCchhh--ccCceEEe-ccCCHHHHHHHHHHhcCCCC--CH-HHHHHH
Confidence            5778898 9999999999998876 9999999875421  12334444 67999999999999999985  32 458899


Q ss_pred             HHHHHhcCCCCCCccccccccc
Q psy968          246 REACDYLLVPFDAHTVRCQNLR  267 (272)
Q Consensus       246 ~eE~~Ff~Ip~~~~~~cC~~l~  267 (272)
                      ++.++++||+. ..+.||+-|.
T Consensus       100 l~aA~~lqi~~-l~~~C~~~l~  120 (557)
T PHA02713        100 LKCADYLLIDD-LVTDCESYIK  120 (557)
T ss_pred             HHHHHHHCHHH-HHHHHHHHHH
Confidence            99999999864 3445555443

>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=96.66  E-value=0.0014  Score=50.41  Aligned_cols=38  Identities=21%  Similarity=0.446  Sum_probs=30.3

Q ss_pred             hHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968           24 SFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        24 s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ++..|+.||+||++ |.+..|+.+.+.+|.+.++|+-|+
T Consensus        49 dp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~Ea~fy~l~   87 (94)
T PF02214_consen   49 DPELFEYILNYLRTGGKLPIPDEICLEELLEEAEFYGLD   87 (94)
T ss_dssp             -HHHHHHHHHHHHHTSSB---TTS-HHHHHHHHHHHT-H
T ss_pred             ChhhhhHHHHHHhhcCccCCCCchhHHHHHHHHHHcCCC
Confidence            78999999999999 899999999999999999998764

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....

>KOG4441|consensus

Probab=96.35  E-value=0.0047  Score=62.78  Aligned_cols=92  Identities=26%  Similarity=0.350  Sum_probs=73.6

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      =-|+|-|+++.|...+-.|..... ++.+||.+++...    +.....-.||||..++.+++|..||++.+.. ..++++
T Consensus        37 cDv~L~v~~~~~~aHR~VLAa~S~-YFraMFt~~l~e~----~~~~i~l~~v~~~~l~~ll~y~Yt~~i~i~~-~nVq~l  110 (571)
T KOG4441|consen   37 CDVTLLVGDREFPAHRVVLAACSP-YFRAMFTSGLKES----KQKEINLEGVDPETLELLLDYAYTGKLEISE-DNVQEL  110 (571)
T ss_pred             ceEEEEECCeeechHHHHHHhccH-HHHHHhcCCcccc----cceEEEEecCCHHHHHHHHHHhhcceEEech-HhHHHH
Confidence            358999999999999999998876 9999999875432    2223444559999999999999999998876 679999


Q ss_pred             HHHHHhcCCCCCCcccccc
Q psy968          246 REACDYLLVPFDAHTVRCQ  264 (272)
Q Consensus       246 ~eE~~Ff~Ip~~~~~~cC~  264 (272)
                      ++.+.++||+.- .+.||.
T Consensus       111 l~aA~~lQi~~v-~~~C~~  128 (571)
T KOG4441|consen  111 LEAASLLQIPEV-VDACCE  128 (571)
T ss_pred             HHHHHHhhhHHH-HHHHHH
Confidence            999999998642 334443

>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac

Probab=93.80  E-value=0.041  Score=39.03  Aligned_cols=40  Identities=35%  Similarity=0.493  Sum_probs=36.4

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .++++.+|+.+|+|..+|.+.-|++ .+.++-++|+|+.++
T Consensus        44 ~~~~~~~f~~~l~~ly~~~~~~~~~-~~~~l~~~a~~~~~~   83 (90)
T smart00225       44 DDVSPEDFRALLEFLYTGKLDLPEE-NVEELLELADYLQIP   83 (90)
T ss_pred             cCCCHHHHHHHHHeecCceeecCHH-HHHHHHHHHHHHCcH
Confidence            4699999999999999999998888 899999999998774

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.

>KOG3713|consensus

Probab=93.43  E-value=0.062  Score=54.31  Aligned_cols=48  Identities=19%  Similarity=0.331  Sum_probs=40.5

Q ss_pred             CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccc
Q psy968           22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRC   69 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c   69 (272)
                      -=++.+|..||+||+||.++||..+=.....|=-||.=|+=++-.==|
T Consensus        86 DR~P~~F~~Vl~fYrtGkLH~p~~vC~~~F~eEL~yWgI~~~~le~CC  133 (477)
T KOG3713|consen   86 DRHPGAFAYVLNFYRTGKLHVPADVCPLSFEEELDYWGIDEAHLESCC  133 (477)
T ss_pred             ccChHHHHHHHHHHhcCeeccccccchHHHHHHHHHhCCChhhhhHHh
Confidence            347899999999999999999999999999999999998755433334

>PHA02713 hypothetical protein; Provisional

Probab=83.71  E-value=1.1  Score=45.30  Aligned_cols=40  Identities=25%  Similarity=0.403  Sum_probs=34.7

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      +..||++.+|+.||||-=||.|.   .-.|++|-+|+|||.||
T Consensus        70 ~l~~v~~~~~~~ll~y~Yt~~i~---~~nv~~ll~aA~~lqi~  109 (557)
T PHA02713         70 NLQMFDKDAVKNIVQYLYNRHIS---SMNVIDVLKCADYLLID  109 (557)
T ss_pred             EeccCCHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHHHCHH
Confidence            46799999999999998889863   45799999999999886

>KOG1665|consensus

Probab=82.67  E-value=0.93  Score=42.85  Aligned_cols=92  Identities=18%  Similarity=0.211  Sum_probs=58.0

Q ss_pred             CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccccchHHHHHHhhchhhHHHHHHHHHHHhHH--H
Q psy968           22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLEDLILP--L   99 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~~l~~llhelsn~ga~~~f~~fl~~~i~p--~   99 (272)
                      .-|+.-|+-||.|-+.|.|.|-.++++.++-|++|||-|=         .|..=|.+ ||.--.+-      +.=||  -
T Consensus        58 DRsp~yFepIlNyLr~Gq~~~~s~i~~lgvLeeArff~i~---------sL~~hle~-~~~e~pe~------~~pltR~d  121 (302)
T KOG1665|consen   58 DRSPKYFEPILNYLRDGQIPSLSDIDCLGVLEEARFFQIL---------SLKDHLED-SRKEVPEV------EAPLTRID  121 (302)
T ss_pred             ccCchhhHHHHHHHhcCceeecCCccHHHHHHHhhHHhhH---------hHHhHHhh-hccCCCcC------CCCccHHH
Confidence            3478889999999999999999999999999999998762         23333333 32211000      00000  1


Q ss_pred             HhhccccCCceeEEEEecCCCccccCCCCC
Q psy968          100 MVNSAQRGDRECHVVVLLDDDTVDWDEAYP  129 (272)
Q Consensus       100 mv~~a~~g~rechivvl~~~d~v~wd~~~p  129 (272)
                      .|+|.|.-+-.|.=|-|.--|--.-|=.+.
T Consensus       122 iik~iqT~elRfqGvNlSGaDLskLDlr~i  151 (302)
T KOG1665|consen  122 IIKCIQTEELRFQGVNLSGADLSKLDLRLI  151 (302)
T ss_pred             HHHHhhhhheeeecccccccchhhcccccc
Confidence            234555566677777777666544444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
3kvt_A	115	Potassium channel protein SHAW; tetramerization do	3e-11
1s1g_A	124	Potassium voltage-gated channel subfamily D membe;	2e-08
2nz0_B	140	Potassium voltage-gated channel subfamily D membe;	2e-08
3drx_A	202	BTB/POZ domain-containing protein KCTD5; golgi, gr	2e-08
3drz_A	107	BTB/POZ domain-containing protein KCTD5; potassium	8e-08
1nn7_A	105	Potassium channel KV4.2; teteramerization domain,	6e-07
1t1d_A	100	Protein (potassium channel KV1.1); potassium chann	1e-06
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	2e-05
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	3e-04

>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Length = 115

 Score = 58.2 bits (141), Expect = 3e-11
 Identities = 21/107 (19%), Positives = 30/107 (28%), Gaps = 5/107 (4%)

Query: 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFR 223
           +E RV + V   R     A     P T L R+        +     EY         VF 
Sbjct: 3   AENRVIINVGGIRHETYKATLKKIPATRLSRLTE--GMLNYDPVLNEYFFDR--HPGVFA 58

Query: 224 AILDYYKGQVIKCPPSVSVQEL-REACDYLLVPFDAHTVRCQNLRRK 269
            I++YY+   +  P  V       E   + L                
Sbjct: 59  QIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTAH 105

>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Length = 124

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 156 SGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAE 215
           + A+     +E + L V   RF         YP+T+LG      +EF    D  EY    
Sbjct: 3   APADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTE---KEFFFNEDTKEYFFDR 59

Query: 216 GIPAAVFRAILDYYKGQVIKCPPSVSVQELREACDY 251
                VFR +L++Y+   +  P    +    +   +
Sbjct: 60  --DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAF 93

>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Length = 140

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 5/90 (5%)

Query: 162 PTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAV 221
              +E + L V   RF         YP+T+LG      +EF    D  EY         V
Sbjct: 31  KRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTE---KEFFFNEDTKEYFFDR--DPEV 85

Query: 222 FRAILDYYKGQVIKCPPSVSVQELREACDY 251
           FR +L++Y+   +  P    +    +   +
Sbjct: 86  FRCVLNFYRTGKLHYPRYECISAYDDELAF 115

>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Length = 202

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 5/116 (4%)

Query: 155 SSGANTIPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVA 214
           S+ A    +  + V L V  T F+         P + L R+  +  +     D     + 
Sbjct: 1   SALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI 60

Query: 215 EGIPAAVFRAILDYYKGQVIKCPPSVSVQEL-REACDYLLVPFDAHTVRCQNLRRK 269
           +  P   F  +L+Y +   +     ++ + +  EA  Y +          ++  R+
Sbjct: 61  DRDP-TYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKL---VKDKIRE 112

>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Length = 107

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFR 223
             + V L V  T F+         P + L R+  +  +     D     + +  P   F 
Sbjct: 4   VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDP-TYFG 62

Query: 224 AILDYYKGQVIKCPPSVSVQEL-REACDYLLVPFDAHTVRCQNLRRK 269
            +L+Y +   +     ++ + +  EA  Y +    +     ++  R+
Sbjct: 63  PVLNYLRHGKLVINKDLAEEGVLEEAEFYNI---TSLIKLVKDKIRE 106

>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Length = 105

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 175 TRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVI 234
           TRF         YP+T+LG      R+F +  +  +Y         +FR IL++Y+   +
Sbjct: 9   TRFQTWQDTLERYPDTLLGSSE---RDFFYHPETQQYFFDR--DPDIFRHILNFYRTGKL 63

Query: 235 KCPPSVSVQELREACDY 251
             P    +    E   +
Sbjct: 64  HYPRHECISAYDEELAF 80

>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Length = 100

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAI 225
           ERV + V   RF         +P+T+LG      R   +   R EY          F AI
Sbjct: 1   ERVVINVSGLRFETQLKTLNQFPDTLLGNPQK--RNRYYDPLRNEYFFDR--NRPSFDAI 56

Query: 226 LDYYK-GQVIKCPPSVSVQELREACDY 251
           L +Y+ G  ++ P +V +    E   +
Sbjct: 57  LYFYQSGGRLRRPVNVPLDVFSEEIKF 83

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFR 223
           S ERV + +   RF         +P T+LG      R       R EY          F 
Sbjct: 50  SSERVVINISGLRFETQLKTLAQFPETLLGDPKK--RMRYFDPLRNEYFFDR--NRPSFD 105

Query: 224 AILDYYK-GQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQN 265
           AIL YY+ G  ++ P +V +    E   +  +  +A  +  ++
Sbjct: 106 AILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFRED 148

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 22/95 (23%)

Query: 168 VTLVVDNTRF-----VLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVF 222
           VT++V++ +F     +L  +  + Y + +    FS   +               I A +F
Sbjct: 34  VTVIVEDRKFRAHKNIL--SASSTYFHQL----FSVAGQVVEL---------SFIRAEIF 78

Query: 223 RAILDY-YKGQVIKCPPSVSVQELREACDYLLVPF 256
             IL+Y Y  ++++    + + EL ++   L V F
Sbjct: 79  AEILNYIYSSKIVRVRSDL-LDELIKSGQLLGVKF 112

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
3kvt_A	115	Potassium channel protein SHAW; tetramerization do	99.97
1t1d_A	100	Protein (potassium channel KV1.1); potassium chann	99.97
1s1g_A	124	Potassium voltage-gated channel subfamily D membe;	99.97
1nn7_A	105	Potassium channel KV4.2; teteramerization domain,	99.96
2nz0_B	140	Potassium voltage-gated channel subfamily D membe;	99.96
3drz_A	107	BTB/POZ domain-containing protein KCTD5; potassium	99.95
3drx_A	202	BTB/POZ domain-containing protein KCTD5; golgi, gr	99.93
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	99.91
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	98.22
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	98.22
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	98.11
1nn7_A	105	Potassium channel KV4.2; teteramerization domain,	98.07
1t1d_A	100	Protein (potassium channel KV1.1); potassium chann	98.05
1s1g_A	124	Potassium voltage-gated channel subfamily D membe;	98.05
2nz0_B	140	Potassium voltage-gated channel subfamily D membe;	98.0
2vpk_A	116	Myoneurin; transcription regulation, transcription	97.99
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	97.97
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	97.97
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	97.93
3kvt_A	115	Potassium channel protein SHAW; tetramerization do	97.88
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	97.88
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	97.87
3drz_A	107	BTB/POZ domain-containing protein KCTD5; potassium	97.87
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	97.85
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	97.81
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	97.78
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	97.77
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	97.76
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	97.7
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	97.68
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	97.58
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	97.54
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	97.52
3drx_A	202	BTB/POZ domain-containing protein KCTD5; golgi, gr	97.3
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	96.87
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	96.36
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	90.89
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	90.83
2vpk_A	116	Myoneurin; transcription regulation, transcription	89.78
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	89.55
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	88.6
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	88.31
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	88.0
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	87.84
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	87.58
2ast_A	159	S-phase kinase-associated protein 1A; SCF-substrat	87.25
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	86.83
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	86.83
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	86.81
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	86.3
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	84.07
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	82.98
4ajy_C	97	Transcription elongation factor B polypeptide 1; E	82.73
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	82.63
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	81.07
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	80.57

>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2

Probab=99.97  E-value=2.6e-32  Score=221.52  Aligned_cols=98  Identities=21%  Similarity=0.291  Sum_probs=91.8

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQ  243 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~  243 (272)
                      ++++|+|||||++|+|+++||.++|+|+||+|++..  ..+++++|||||||  ||.+|++||||||+|+|++|+++|..
T Consensus         3 ~~~~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~--~~~~~~~g~~FiDR--dp~~F~~ILnylR~G~l~~p~~~~~~   78 (115)
T 3kvt_A            3 AENRVIINVGGIRHETYKATLKKIPATRLSRLTEGM--LNYDPVLNEYFFDR--HPGVFAQIINYYRSGKLHYPTDVCGP   78 (115)
T ss_dssp             -CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTS--TTEETTTTEEEECS--CTTTHHHHHHHHHHSCBCCCSSSCHH
T ss_pred             CCCEEEEEECCEEEEecHHHHhcCCCccHHHHhcCC--CCCCCCCCcEEEec--ChHHHHHHHHHhcCCCCCCCCcccHH
Confidence            468999999999999999999999999999999753  24678999999999  99999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCccccccc
Q psy968          244 ELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       244 ~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      .|++|++||+|+...+..||+.
T Consensus        79 ~~~~Ea~fy~i~~~~l~~CC~~  100 (115)
T 3kvt_A           79 LFEEELEFWGLDSNQVEPCCWM  100 (115)
T ss_dssp             HHHHHHHHHTCCGGGBCGGGSH
T ss_pred             HHHHHHHHhCCChHHHHHHHHH
Confidence            9999999999999999999974

>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A

Probab=99.97  E-value=1.3e-31  Score=212.85  Aligned_cols=95  Identities=23%  Similarity=0.324  Sum_probs=86.5

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCCCHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSVSVQE  244 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~vc~~~  244 (272)
                      ++|+|||||++|+|+++||+++|+||||+|+++.  ..+++++|||||||  ||.+|++||||||+ |+|++|+++|...
T Consensus         1 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~--~~~~~~~~eyFiDR--dp~~F~~ILnflR~~G~l~~p~~~~~~~   76 (100)
T 1t1d_A            1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRN--RYYDPLRNEYFFDR--NRPSFDAILYFYQSGGRLRRPVNVPLDV   76 (100)
T ss_dssp             CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHG--GGEETTTTEEEECS--CSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred             CEEEEEECCEEEEeeHHHHhcCCCccccchhccc--cccCCCceeEEEcC--ChHHHHHHHHHHhcCCcccCCCCCCHHH
Confidence            5799999999999999999999999999998753  24788999999999  99999999999999 9999999999999


Q ss_pred             HHHHHHhcCCCCCCcccccc
Q psy968          245 LREACDYLLVPFDAHTVRCQ  264 (272)
Q Consensus       245 f~eE~~Ff~Ip~~~~~~cC~  264 (272)
                      |++||+||+|+...+..|..
T Consensus        77 ~~~Ea~fy~i~~~~~~~~~~   96 (100)
T 1t1d_A           77 FSEEIKFYELGENAFERYRE   96 (100)
T ss_dssp             HHHHHHHTTCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHH
Confidence            99999999998876665443

>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2

Probab=99.97  E-value=5.8e-31  Score=216.20  Aligned_cols=100  Identities=22%  Similarity=0.396  Sum_probs=90.0

Q ss_pred             CCCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCC
Q psy968          161 IPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSV  240 (272)
Q Consensus       161 ~p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~v  240 (272)
                      .+..+++|+|||||++|+|+++||+++|+||||+   ++....+++++|+|||||  ||.+|++||||||+|+|++|+++
T Consensus         8 ~~~~~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~---~~~~~~~~~~~g~~FiDR--dp~~F~~ILnflR~G~l~~p~~~   82 (124)
T 1s1g_A            8 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGS---TEKEFFFNEDTKEYFFDR--DPEVFRCVLNFYRTGKLHYPRYE   82 (124)
T ss_dssp             ----CCEEEEEETTEEEEEEHHHHTTSTTSSTTS---SGGGGTBCSSSCSEEECS--CHHHHHHHHHHHHHSCBCCCTTS
T ss_pred             CCCCCCEEEEEeCCEEEEEeHHHHhcCCCceecc---cCCcccccCCCCcEEEcC--ChHHHHHHHHHHhcCCCCCCCCc
Confidence            3456799999999999999999999999999998   233345789999999999  99999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCCCCccccccc
Q psy968          241 SVQELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       241 c~~~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      |...|++||+||+|+...+..||+.
T Consensus        83 ~~~~l~~Ea~fy~i~~l~l~~cC~~  107 (124)
T 1s1g_A           83 CISAYDDELAFYGILPEIIGDCCYE  107 (124)
T ss_dssp             CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred             CHHHHHHHHHHcCCChHHHHHHHHH
Confidence            9999999999999999999999974

>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2

Probab=99.96  E-value=8.6e-31  Score=208.91  Aligned_cols=94  Identities=22%  Similarity=0.391  Sum_probs=87.5

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      +|+|||||++|+|+++||+++|+||||++   .....+++++|+|||||  ||.+|++||||||+|+|++|+++|...|+
T Consensus         1 ~V~LNVGG~~f~t~~~TL~~~p~s~L~~~---~~~~~~~~~~~~~FiDR--dp~~F~~ILnflR~g~l~~p~~~~~~~l~   75 (105)
T 1nn7_A            1 LIVLNVSGTRFQTWQDTLERYPDTLLGSS---ERDFFYHPETQQYFFDR--DPDIFRHILNFYRTGKLHYPRHECISAYD   75 (105)
T ss_dssp             CEEEEETTEEEEECHHHHHTSCSSSTTSG---GGGGGEEGGGTEEEECS--CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred             CEEEEECCEEEEEeHHHHhcCCCcccccc---CCcccccCCCCcEEEeC--CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence            58999999999999999999999999993   22335789999999999  99999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccccccc
Q psy968          247 EACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      +||+||+|+...+..||+.
T Consensus        76 ~Ea~fy~i~~l~~~~cc~~   94 (105)
T 1nn7_A           76 EELAFFGLIPEIIGDCCYE   94 (105)
T ss_dssp             HHHHHHTCCSCCBCHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHHH
Confidence            9999999999999999974

>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A

Probab=99.96  E-value=2.7e-30  Score=216.44  Aligned_cols=98  Identities=22%  Similarity=0.409  Sum_probs=90.9

Q ss_pred             CCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968          163 TSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV  242 (272)
Q Consensus       163 ~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~  242 (272)
                      ..+++|+|||||++|+|+++||+++|+||||+.   +....+++++|+|||||  ||.+|++||||||+|+|++|+++|.
T Consensus        32 ~~~~~V~LNVGG~~F~T~~~TL~~~P~S~L~~~---~~~~~~~~~~g~yFiDR--dp~~F~~ILnflR~G~l~~p~~~~~  106 (140)
T 2nz0_B           32 RQDELIVLNVSGRRFQTWRTTLERYPDTLLGST---EKEFFFNEDTKEYFFDR--DPEVFRCVLNFYRTGKLHYPRYECI  106 (140)
T ss_dssp             TCCCEEEEEETTEEEEEEHHHHHTCTTSTTTSG---GGGGSEETTTTEEEECS--CHHHHHHHHHHHHHSSBCCCTTSCH
T ss_pred             CCCCEEEEEECCEEEEeeHHHHhcCCCeeeccc---CCcccccCCCCeEEEeC--CcHHHHHHHHHHhcCCcCCCCCcCH
Confidence            367999999999999999999999999999992   22345789999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCccccccc
Q psy968          243 QELREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       243 ~~f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      ..|++|++||+|+...+..||+.
T Consensus       107 ~~l~eEa~fy~i~~l~l~~CC~~  129 (140)
T 2nz0_B          107 SAYDDELAFYGILPEIIGDCCYE  129 (140)
T ss_dssp             HHHHHHHHHHTCCGGGBCTTTHH
T ss_pred             HHHHHHHHHcCCChHHHHHHHHH
Confidence            99999999999999999999974

>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}

Probab=99.95  E-value=4.5e-29  Score=198.38  Aligned_cols=91  Identities=15%  Similarity=0.316  Sum_probs=82.6

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCccc-CCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFT-HTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV  242 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~-~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~  242 (272)
                      .+++|+|||||++|+|+++||.++|+|+||+||+.+...+ ..+++|+|||||  ||.+|++||||||+|+|++|+++|.
T Consensus         4 ~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDR--dp~~F~~IL~~lr~g~l~~p~~~~~   81 (107)
T 3drz_A            4 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDR--DPTYFGPVLNYLRHGKLVINKDLAE   81 (107)
T ss_dssp             -CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECS--CHHHHHHHHHHHHHSCCCCCTTSCH
T ss_pred             CCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecC--ChHHHHHHHHHhCCCeeCCCCCCCH
Confidence            5689999999999999999999999999999998764433 235899999999  9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCC
Q psy968          243 QELREACDYLLVPF  256 (272)
Q Consensus       243 ~~f~eE~~Ff~Ip~  256 (272)
                      ..|++||+||+|+.
T Consensus        82 ~~l~~Ea~fy~l~~   95 (107)
T 3drz_A           82 EGVLEEAEFYNITS   95 (107)
T ss_dssp             HHHHHHHHHHTCHH
T ss_pred             HHHHHHHHHCCCHH
Confidence            99999999999963

>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A

Probab=99.93  E-value=1.5e-26  Score=204.76  Aligned_cols=90  Identities=16%  Similarity=0.330  Sum_probs=81.7

Q ss_pred             CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCccc-CCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968          164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFT-HTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV  242 (272)
Q Consensus       164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~-~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~  242 (272)
                      .+++|+|||||++|+|+++||.++|+|+||+||+.....+ ..+++|+|||||  ||.+|++||||||+|+|++|+++|.
T Consensus        10 ~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDR--DP~~F~~ILnyLRtG~L~lP~~~~~   87 (202)
T 3drx_A           10 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDR--DPTYFGPVLNYLRHGKLVINKDLAE   87 (202)
T ss_dssp             CCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECS--CSTTHHHHHHHHHHSCCCCCTTSCH
T ss_pred             CCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecC--ChHHHHHHHHHhcCCccCCCCCCCH
Confidence            4699999999999999999999999999999998654433 235799999999  9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCC
Q psy968          243 QELREACDYLLVP  255 (272)
Q Consensus       243 ~~f~eE~~Ff~Ip  255 (272)
                      ..|++||+||+|+
T Consensus        88 ~~l~eEA~FygL~  100 (202)
T 3drx_A           88 EGVLEEAEFYNIT  100 (202)
T ss_dssp             HHHHHHHHHTTCH
T ss_pred             HHHHHHHHHCCcH
Confidence            9999999999995

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=99.91  E-value=5.5e-25  Score=214.47  Aligned_cols=95  Identities=24%  Similarity=0.329  Sum_probs=85.0

Q ss_pred             CCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCC
Q psy968          162 PTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSV  240 (272)
Q Consensus       162 p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~v  240 (272)
                      +..+++|+|||||++|+|+++||+++|+|+||+|++..  ..|++++|||||||  ||.+|++||||||| |+||+|+++
T Consensus        48 ~~~~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~--~~~~~~~~~~f~DR--~~~~F~~IL~~~r~~g~l~~p~~~  123 (514)
T 2r9r_B           48 HESSERVVINISGLRFETQLKTLAQFPETLLGDPKKRM--RYFDPLRNEYFFDR--NRPSFDAILYYYQSGGRLRRPVNV  123 (514)
T ss_dssp             ---CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHG--GGEETTTTEEEECS--CHHHHHHHHHHHHHTSCCCCCTTS
T ss_pred             CCCCCEEEEEeCCEEEEecHHHHhcCCCCcccccccCC--cccCCCCCCEEEcC--ChHHHHHHHHHHhcCCccccCCcc
Confidence            34578999999999999999999999999999998642  35889999999999  99999999999999 999999999


Q ss_pred             CHHHHHHHHHhcCCCCCCcc
Q psy968          241 SVQELREACDYLLVPFDAHT  260 (272)
Q Consensus       241 c~~~f~eE~~Ff~Ip~~~~~  260 (272)
                      |...|++|++||+|+...++
T Consensus       124 ~~~~~~~E~~f~~i~~~~~~  143 (514)
T 2r9r_B          124 PLDIFSEEIRFYELGEEAME  143 (514)
T ss_dssp             CHHHHHHHHHHTTCCHHHHH
T ss_pred             cHHHHHHHHHhcCCCHHHHh
Confidence            99999999999999765543

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A

Probab=98.22  E-value=1.6e-06  Score=67.93  Aligned_cols=85  Identities=14%  Similarity=0.231  Sum_probs=70.3

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      .-|+|.|+|+.|.+.+..|..... ++.+||++++..    ..++.-+..++++.+|+.+|+|..||++.++. ..+..+
T Consensus        30 ~Dv~l~v~~~~~~aHk~iLaa~S~-~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~l  103 (127)
T 1r29_A           30 TDVVIVVSREQFRAHKTVLMACSG-LFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSRLNLRE-GNIMAV  103 (127)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred             CCEEEEECCEEEehHHHHHHHhCH-HHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHH
Confidence            357889999999999999988754 999999876442    44556664668999999999999999998765 468899


Q ss_pred             HHHHHhcCCCC
Q psy968          246 REACDYLLVPF  256 (272)
Q Consensus       246 ~eE~~Ff~Ip~  256 (272)
                      +..+++|+++.
T Consensus       104 l~~A~~~~i~~  114 (127)
T 1r29_A          104 MATAMYLQMEH  114 (127)
T ss_dssp             HHHHHHTTCHH
T ss_pred             HHHHHHhCCHH
Confidence            99999999863

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A

Probab=98.22  E-value=3.5e-06  Score=65.85  Aligned_cols=90  Identities=14%  Similarity=0.206  Sum_probs=71.9

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|.+.+..|..... ++.+||.+.+.     +..+..+..+|++..|+.+|+|..||++.++. ..+..+.
T Consensus        34 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~~-----e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll  106 (125)
T 3ohu_A           34 DVTLIVERKEFRAHRAVLAACSE-YFWQALVGQTK-----NDLVVSLPEEVTARGFGPLLQFAYTAKLLLSR-ENIREVI  106 (125)
T ss_dssp             CEEEEETTEEEEECHHHHHHHBH-HHHHHHTTCCC-----SSCEEECCTTCCHHHHHHHHHHHTTSEEEECT-TTHHHHH
T ss_pred             ceEEEECCEEEechHHHHHHcCH-HHHHHhcCCCC-----CCcEEEeCCCCCHHHHHHHHHhHcCCceEECH-HHHHHHH
Confidence            37788999999999999998865 89999987543     14445554458999999999999999998877 4688999


Q ss_pred             HHHHhcCCCCCCcccccc
Q psy968          247 EACDYLLVPFDAHTVRCQ  264 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~  264 (272)
                      +.+++|+|+. ....|++
T Consensus       107 ~~A~~l~i~~-L~~~C~~  123 (125)
T 3ohu_A          107 RCAEFLRMHN-LEDSCFS  123 (125)
T ss_dssp             HHHHHHTBSS-CTTSSCC
T ss_pred             HHHHHhCCHH-HHHHHHH
Confidence            9999999974 3444543

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}

Probab=98.11  E-value=3.7e-06  Score=66.33  Aligned_cols=90  Identities=14%  Similarity=0.190  Sum_probs=69.9

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|.+.+..|..... ++.+||.+.       ...+..+..++++.+|+.+|+|..||++.++. ..+..++
T Consensus        35 Dv~l~v~~~~~~~Hk~vLaa~S~-~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll  105 (129)
T 3ga1_A           35 DVSVVVKGHAFKAHRAVLAASSS-YFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTGRLSMNV-GDQDLLM  105 (129)
T ss_dssp             CEEEEETTEEEEECHHHHHHHBH-HHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHSEEECCT-TTHHHHH
T ss_pred             ceEEEECCEEEEehHHHHHHcCH-HHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCCccccCH-HHHHHHH
Confidence            37888999999999999998854 899998764       34455563368999999999999999998877 4588999


Q ss_pred             HHHHhcCCCCCCcccccccc
Q psy968          247 EACDYLLVPFDAHTVRCQNL  266 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~~l  266 (272)
                      +.+++|+|+.- ...|++-|
T Consensus       106 ~~A~~~~i~~l-~~~C~~~L  124 (129)
T 3ga1_A          106 YTAGFLQIQEI-MEKGTEFF  124 (129)
T ss_dssp             HHHHHTTBTTS-SCC-----
T ss_pred             HHHHHhCCHHH-HHHHHHHH
Confidence            99999999763 34455433

>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2

Probab=98.07  E-value=1.1e-06  Score=69.53  Aligned_cols=46  Identities=17%  Similarity=0.354  Sum_probs=41.4

Q ss_pred             hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccc
Q psy968           24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRC   69 (272)
Q Consensus        24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c   69 (272)
                      ++.+|+.||+||++|.+.+|+++++.+|++.++|+.|+-..-.--|
T Consensus        47 dp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc   92 (105)
T 1nn7_A           47 DPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC   92 (105)
T ss_dssp             CTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred             CcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence            7889999999999999999999999999999999999987643334

>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A

Probab=98.05  E-value=1.4e-06  Score=68.80  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=37.3

Q ss_pred             CchHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968           22 CKSFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .-++.+|+.||+||++ |.++||+++++.+|++.++|+.|+
T Consensus        47 DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~   87 (100)
T 1t1d_A           47 DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELG   87 (100)
T ss_dssp             CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCC
T ss_pred             cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCC
Confidence            3478899999999999 999999999999999999999985

>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2

Probab=98.05  E-value=1.9e-06  Score=70.34  Aligned_cols=46  Identities=15%  Similarity=0.343  Sum_probs=41.2

Q ss_pred             hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccc
Q psy968           24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRC   69 (272)
Q Consensus        24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c   69 (272)
                      ++.+|+.||+||++|.+.||+++++.+|++-|+|+.|+...-.--|
T Consensus        60 dp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC  105 (124)
T 1s1g_A           60 DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC  105 (124)
T ss_dssp             CHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHH
T ss_pred             ChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence            7899999999999999999999999999999999999976533333

>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A

Probab=98.00  E-value=2.8e-06  Score=70.90  Aligned_cols=47  Identities=15%  Similarity=0.323  Sum_probs=42.4

Q ss_pred             hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCccccc
Q psy968           24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQ   70 (272)
Q Consensus        24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~   70 (272)
                      ++.+|+.||+||++|.+.||+++++.+|++-++|+.|+...-.--|+
T Consensus        82 dp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC~  128 (140)
T 2nz0_B           82 DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCY  128 (140)
T ss_dssp             CHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTTH
T ss_pred             CcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHHH
Confidence            78999999999999999999999999999999999999876444453

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}

Probab=97.99  E-value=8.3e-06  Score=62.93  Aligned_cols=81  Identities=19%  Similarity=0.377  Sum_probs=66.6

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEec-cCCCccchHHHHhhHhCCeeecCCCCCHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVA-EGIPAAVFRAILDYYKGQVIKCPPSVSVQE  244 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFD-R~idp~vFr~ILnYYRTGkLh~P~~vc~~~  244 (272)
                      .-|+|.|||++|.+.+..|..... ++.+||+++       .+++..++ .++++.+|+.+|+|..||++.++. ..+..
T Consensus        23 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~   93 (116)
T 2vpk_A           23 CDCTIVIGEFQFKAHRNVLASFSE-YFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKE   93 (116)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHH
T ss_pred             CcEEEEECCEEEeccHHHHhhcCH-HHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHH
Confidence            347889999999999999987754 899999865       23344444 157999999999999999998766 46889


Q ss_pred             HHHHHHhcCCC
Q psy968          245 LREACDYLLVP  255 (272)
Q Consensus       245 f~eE~~Ff~Ip  255 (272)
                      +...+++|+++
T Consensus        94 ll~~A~~~~i~  104 (116)
T 2vpk_A           94 IHQAADYLKVE  104 (116)
T ss_dssp             HHHHHHHTTCH
T ss_pred             HHHHHHHhCCH
Confidence            99999999985

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}

Probab=97.97  E-value=7.4e-06  Score=63.90  Aligned_cols=79  Identities=18%  Similarity=0.252  Sum_probs=65.7

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|...+..|..... ++.+||++++       .++.-+ .++++.+|+.+|+|..||++.++. ..+..+.
T Consensus        26 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~-------~~~i~l-~~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll   95 (119)
T 3b84_A           26 DATLDVGGLVFKAHWSVLACCSH-FFQSLYGDGS-------GGSVVL-PAGFAEIFGLLLDFFYTGHLALTS-GNRDQVL   95 (119)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHHHTTTT-------CCCEEE-CGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHH
T ss_pred             ceEEEECCEEEEeeHHHHhhcCH-HHHHHHCCCC-------CCeEEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHHH
Confidence            47788999999999999998754 8999998653       234444 357999999999999999998776 4588999


Q ss_pred             HHHHhcCCC
Q psy968          247 EACDYLLVP  255 (272)
Q Consensus       247 eE~~Ff~Ip  255 (272)
                      ..+++|+++
T Consensus        96 ~~A~~~~i~  104 (119)
T 3b84_A           96 LAARELRVP  104 (119)
T ss_dssp             HHHHHTTCH
T ss_pred             HHHHHhCcH
Confidence            999999995

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}

Probab=97.97  E-value=7.8e-06  Score=64.22  Aligned_cols=92  Identities=14%  Similarity=0.182  Sum_probs=71.3

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      --|+|.|||++|...+..|..... ++.+||++++.     +..+.-+..+|++..|+.+|+|..||++.++. ..+..+
T Consensus        30 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~mf~~~~~-----e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~l  102 (124)
T 2ihc_A           30 CDVTIFVEGQRFRAHRSVLAACSS-YFHSRIVGQAD-----GELNITLPEEVTVKGFEPLIQFAYTAKLILSK-ENVDEV  102 (124)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHBH-HHHHHHTTC--------CEEEECCTTSCHHHHHHHHHHHHHSEEEEET-TTHHHH
T ss_pred             cCEEEEECCEEEecHHHHHHHcCH-HHHHHHcCCCC-----CCceEeecCCcCHHHHHHHHHHhcCCCcccCH-HHHHHH
Confidence            347789999999999999987754 89999987542     12334443478999999999999999998876 458899


Q ss_pred             HHHHHhcCCCCCCccccccc
Q psy968          246 REACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       246 ~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      +..+++|+++.- ...|++-
T Consensus       103 l~~A~~~~~~~L-~~~C~~~  121 (124)
T 2ihc_A          103 CKCVEFLSVHNI-EESCFQF  121 (124)
T ss_dssp             HHHHHHHTBSSC-CGGGGGT
T ss_pred             HHHHHHHCCHHH-HHHHHHH
Confidence            999999999753 4455543

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A

Probab=97.93  E-value=8.2e-06  Score=63.15  Aligned_cols=85  Identities=19%  Similarity=0.401  Sum_probs=65.5

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      .-|+|.|||+.|.+.+..|..... ++.+||++++..   ....+.-+ .++++.+|+.+|+|..||++.++. ..+..+
T Consensus        26 ~Dv~l~v~~~~~~aHk~vLaa~S~-~F~~~f~~~~~e---~~~~~i~l-~~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~l   99 (120)
T 2if5_A           26 CDVVILVEGREFPTHRSVLAACSQ-YFKKLFTSGAVV---DQQNVYEI-DFVSAEALTALMDFAYTATLTVST-ANVGDI   99 (120)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHC--------CCSEEEC-CSSCHHHHHHHHHHHHHSCCCCCG-GGHHHH
T ss_pred             CCeEEEECCEEEeHHHHHHHHhCH-HHHHHhcCCccc---cCCceEEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHH
Confidence            457888999999999999998754 899999876432   22233333 468999999999999999998765 357889


Q ss_pred             HHHHHhcCCCC
Q psy968          246 REACDYLLVPF  256 (272)
Q Consensus       246 ~eE~~Ff~Ip~  256 (272)
                      ...+++|+++.
T Consensus       100 l~~A~~~~i~~  110 (120)
T 2if5_A          100 LSAARLLEIPA  110 (120)
T ss_dssp             HHHHHHTTCHH
T ss_pred             HHHHHHhCCHH
Confidence            99999999863

>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2

Probab=97.88  E-value=4.5e-06  Score=67.32  Aligned_cols=48  Identities=19%  Similarity=0.353  Sum_probs=43.4

Q ss_pred             chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCccccc
Q psy968           23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQ   70 (272)
Q Consensus        23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~   70 (272)
                      -++.+|+.||+||++|.+.+|+++++.++++.++|+.|+-..-.--|+
T Consensus        52 Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~   99 (115)
T 3kvt_A           52 RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCW   99 (115)
T ss_dssp             SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGS
T ss_pred             cChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHH
Confidence            478999999999999999999999999999999999999876555565

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}

Probab=97.88  E-value=1.5e-05  Score=63.71  Aligned_cols=93  Identities=15%  Similarity=0.196  Sum_probs=71.9

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      --|+|.|||+.|...+..|..... ++.+||.+.+.     +..+.-+..+|++..|+.+|+|..||++.++. ..+..+
T Consensus        37 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~~-----e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~l  109 (138)
T 2z8h_A           37 CDVTVLVEGQRFRAHRSVLAACSS-YFHSRIVGQTD-----AELTVTLPEEVTVKGFEPLIQFAYTAKLILSK-DNVDEV  109 (138)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTTCCC-----TTEEEECCTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred             cCeEEEECCEEEechHHHHHHcCH-HHHHHHhcCCC-----CCceEEeCCCCCHHHHHHHHHHhcCCCcccCH-HHHHHH
Confidence            347788999999999999988755 99999987543     12334443478999999999999999998876 458899


Q ss_pred             HHHHHhcCCCCCCcccccccc
Q psy968          246 REACDYLLVPFDAHTVRCQNL  266 (272)
Q Consensus       246 ~eE~~Ff~Ip~~~~~~cC~~l  266 (272)
                      +..+++|+++. ....|++-+
T Consensus       110 l~~A~~~~i~~-L~~~C~~~l  129 (138)
T 2z8h_A          110 CRCVEFLSVHN-IEESCFQFL  129 (138)
T ss_dssp             HHHHHHHTCGG-GHHHHHHHT
T ss_pred             HHHHHHhCCHH-HHHHHHHHH
Confidence            99999999974 334444433

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}

Probab=97.87  E-value=1.2e-05  Score=64.18  Aligned_cols=87  Identities=18%  Similarity=0.226  Sum_probs=67.1

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|+|++|.+.+..|..... ++.+||..++       +++.-+ .+|++.+|+.+|+|..||++.++. ..+..++
T Consensus        27 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~mf~~~~-------~~~i~l-~~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll   96 (135)
T 2yy9_A           27 DATLDVGGLVFKAHWSVLACCSH-FFQRIYGDGT-------GGSVVL-PAGFAEIFGLLLDFFYTGHLALTS-GNRDQVL   96 (135)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHTCC-----------CCEEE-CGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHH
T ss_pred             ceEEEECCEEEehHHHHHHHhCH-HHHHHHcCCC-------CCeEEe-CCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHH
Confidence            47788999999999999998854 8999998653       334444 357999999999999999998876 4588999


Q ss_pred             HHHHhcCCCCCCcccccc
Q psy968          247 EACDYLLVPFDAHTVRCQ  264 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~  264 (272)
                      ..+++|+|+. ....|++
T Consensus        97 ~~A~~l~i~~-L~~~C~~  113 (135)
T 2yy9_A           97 LAAKELRVPE-AVELCQS  113 (135)
T ss_dssp             HHHHHTTCHH-HHHHHHH
T ss_pred             HHHHHhCcHH-HHHHHHH
Confidence            9999999953 3334443

>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}

Probab=97.87  E-value=6.2e-06  Score=64.95  Aligned_cols=40  Identities=10%  Similarity=0.250  Sum_probs=37.6

Q ss_pred             CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .-++.+|+.||+||++|.+.||+++++.+|.+.++|+.|+
T Consensus        55 DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~   94 (107)
T 3drz_A           55 DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNIT   94 (107)
T ss_dssp             CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCH
T ss_pred             cCChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCH
Confidence            4589999999999999999999999999999999999875

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}

Probab=97.85  E-value=2e-05  Score=63.91  Aligned_cols=87  Identities=23%  Similarity=0.309  Sum_probs=67.2

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      --|+|.|||+.|.+.+..|..... ++.+||++++.. ......+.-+ .+|++.+|+.+|+|..||++.++. ..+..+
T Consensus        48 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~mf~~~~~e-~e~~~~~I~l-~~v~~~~f~~lL~fiYtg~~~i~~-~~v~~l  123 (144)
T 2ppi_A           48 CDAHLVLDGEEIPVQKNILAAASP-YIRTKLNYNPPK-DDGSTYKIEL-EGISVMVMREILDYIFSGQIRLNE-DTIQDV  123 (144)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHHCC------CCCEEEC-CSSCHHHHHHHHHHHTTSCCCCCT-TTHHHH
T ss_pred             cceEEEECCEEEehHHHHHHHcCH-HHHHHHcCCCcc-ccCCCcEEEe-CCCCHHHHHHHHHHHhCCCCCCCH-HHHHHH
Confidence            357889999999999999998754 899999865431 1122334444 458999999999999999997765 468899


Q ss_pred             HHHHHhcCCCC
Q psy968          246 REACDYLLVPF  256 (272)
Q Consensus       246 ~eE~~Ff~Ip~  256 (272)
                      +..+++|+++.
T Consensus       124 l~~A~~l~i~~  134 (144)
T 2ppi_A          124 VQAADLLLLTD  134 (144)
T ss_dssp             HHHHHHTTCHH
T ss_pred             HHHHHHhCcHH
Confidence            99999999853

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}

Probab=97.81  E-value=2.8e-05  Score=58.89  Aligned_cols=84  Identities=18%  Similarity=0.190  Sum_probs=65.1

Q ss_pred             CcEEEeeCC----eEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCC
Q psy968          166 ERVTLVVDN----TRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVS  241 (272)
Q Consensus       166 ~rV~LNVGG----~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc  241 (272)
                      .-|+|.|||    +.|.+.+..|..... ++.+||++++..    ..++.-+ .++++.+|+.+|+|..||++.++. ..
T Consensus         9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~-~F~~~f~~~~~e----~~~~i~l-~~~~~~~f~~~l~~iYt~~~~~~~-~~   81 (109)
T 2vkp_A            9 ADVHFVVGPPGATRTVPAHKYVLAVGSS-VFYAMFYGDLAE----VKSEIHI-PDVEPAAFLILLKYMYSDEIDLEA-DT   81 (109)
T ss_dssp             CCEEEEESSTTSCEEEEECHHHHHHHCH-HHHHHHC----------CCEEEE-TTSCHHHHHHHHHHHHHCCCCCCT-TT
T ss_pred             ccEEEEECCCCCcEEEEeeHHHHHHcCH-HHHHHhcCCccc----CCCeEEe-CCCCHHHHHHHHHHHcCCCccCCH-HH
Confidence            347888998    999999999987754 999999876432    1244555 457999999999999999998877 45


Q ss_pred             HHHHHHHHHhcCCCC
Q psy968          242 VQELREACDYLLVPF  256 (272)
Q Consensus       242 ~~~f~eE~~Ff~Ip~  256 (272)
                      +..+...+++|+++.
T Consensus        82 ~~~ll~~A~~~~~~~   96 (109)
T 2vkp_A           82 VLATLYAAKKYIVPA   96 (109)
T ss_dssp             HHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHhCcHH
Confidence            788999999999863

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A

Probab=97.78  E-value=1.5e-05  Score=62.12  Aligned_cols=80  Identities=18%  Similarity=0.289  Sum_probs=64.9

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      .-|+|.|||+.|...+..|..... ++.+||+++...        .-+ .++++.+|+.+|+|..||++.++. ..+..+
T Consensus        28 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~~f~~~~~~--------i~l-~~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~l   96 (119)
T 2q81_A           28 CDCTFVVDGVHFKAHKAVLAACSE-YFKMLFVDQKDV--------VHL-DISNAAGLGQVLEFMYTAKLSLSP-ENVDDV   96 (119)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHHCCSG--------GGG-GGCCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred             cceEEEECCEEEehhHHHHHHcCH-HHHHHHcCCCCE--------EEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHH
Confidence            347788999999999999988755 899998864221        112 346899999999999999998877 458899


Q ss_pred             HHHHHhcCCCC
Q psy968          246 REACDYLLVPF  256 (272)
Q Consensus       246 ~eE~~Ff~Ip~  256 (272)
                      ...+++|+++.
T Consensus        97 l~~A~~l~i~~  107 (119)
T 2q81_A           97 LAVATFLQMQD  107 (119)
T ss_dssp             HHHHHHTTCHH
T ss_pred             HHHHHHhCCHH
Confidence            99999999863

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A

Probab=97.77  E-value=1.3e-05  Score=62.50  Aligned_cols=80  Identities=18%  Similarity=0.363  Sum_probs=65.1

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      .-|+|.|||+.|.+.+..|..... ++.+||+++.        .+.-+ .++++.+|+.+|+|..||++.+++ ..+..+
T Consensus        29 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~--------~~i~l-~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~l   97 (121)
T 1buo_A           29 CDVVIMVDSQEFHAHRTVLACTSK-MFEILFHRNS--------QHYTL-DFLSPKTFQQILEYAYTATLQAKA-EDLDDL   97 (121)
T ss_dssp             CCEEEEESSCEEEECHHHHHHHCH-HHHHHTTSCC--------SEEEE-CSSCHHHHHHHHHHHHHSCCCCCG-GGHHHH
T ss_pred             CCEEEEECCEEEehhHHHHhhcCH-HHHHHHcCCC--------cEEEe-CCCCHHHHHHHHHhhcCCCcCCCH-HHHHHH
Confidence            347788999999999999987754 8999987642        23333 468999999999999999998776 457889


Q ss_pred             HHHHHhcCCCC
Q psy968          246 REACDYLLVPF  256 (272)
Q Consensus       246 ~eE~~Ff~Ip~  256 (272)
                      ...+++|+++.
T Consensus        98 l~~A~~~~i~~  108 (121)
T 1buo_A           98 LYAAEILEIEY  108 (121)
T ss_dssp             HHHHHHHTCHH
T ss_pred             HHHHHHHCCHH
Confidence            99999999853

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A

Probab=97.76  E-value=1.9e-05  Score=61.71  Aligned_cols=78  Identities=24%  Similarity=0.356  Sum_probs=63.4

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCee-ecCCCCCHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVI-KCPPSVSVQEL  245 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkL-h~P~~vc~~~f  245 (272)
                      -|+|.|||+.|...+..|..... ++.+||.++        .++.-+ .+|++.+|+.+|+|..||++ .++. ..+..+
T Consensus        33 Dv~l~v~~~~f~aHk~vLaa~S~-~F~~~f~~~--------~~~i~l-~~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~l  101 (116)
T 3fkc_A           33 DVTVIVEDRKFRAHKNILSASST-YFHQLFSVA--------GQVVEL-SFIRAEIFAEILNYIYSSKIVRVRS-DLLDEL  101 (116)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHHTTSC--------CSEEEE-CSSCHHHHHHHHHHHTTSCCCSCCH-HHHHHH
T ss_pred             eEEEEECCEEEehhHHHHHHcCH-HHHHHHcCC--------CCEEEe-CCCCHHHHHHHHHhhcCCCcCCCCH-HHHHHH
Confidence            47788999999999999988755 899998764        234444 46899999999999999998 4444 346789


Q ss_pred             HHHHHhcCCC
Q psy968          246 REACDYLLVP  255 (272)
Q Consensus       246 ~eE~~Ff~Ip  255 (272)
                      ++.+++|+|+
T Consensus       102 l~~A~~l~i~  111 (116)
T 3fkc_A          102 IKSGQLLGVK  111 (116)
T ss_dssp             HHHHHHHTCH
T ss_pred             HHHHHHhCcc
Confidence            9999999985

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B

Probab=97.70  E-value=4.4e-05  Score=66.27  Aligned_cols=86  Identities=23%  Similarity=0.330  Sum_probs=63.5

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      --|+|.|||+.|...+..|..... ++.+||++++.. ......+.-+ .+|++.+|+.+|+|..||++.++. ..+..+
T Consensus        32 ~Dv~l~v~~~~f~~Hr~vLaa~S~-yF~~mf~~~~~~-~e~~~~~i~l-~~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~l  107 (256)
T 3hve_A           32 CDAHLVLDGEEIPVQKNILAAASP-YIRTKLNYNPPK-DDGSTYKIEL-EGISVMVMREILDYIFSGQIRLNE-DTIQDV  107 (256)
T ss_dssp             CCEEEEETTEEEEECHHHHHTTCH-HHHHTC------------CEEEC-SSCCHHHHHHHHHHHHHSCCCCC--CCHHHH
T ss_pred             cceEEEECCEEEechHHHHHHcCH-HHHHHhCCCCCc-ccCCCCeEEe-CCCCHHHHHHHHhhccCCCCcccH-hHHHHH
Confidence            347888999999999999998855 999999865431 1122233333 468999999999999999998776 568899


Q ss_pred             HHHHHhcCCC
Q psy968          246 REACDYLLVP  255 (272)
Q Consensus       246 ~eE~~Ff~Ip  255 (272)
                      ...+++|+++
T Consensus       108 l~~A~~l~i~  117 (256)
T 3hve_A          108 VQAADLLLLT  117 (256)
T ss_dssp             HHHHHHHTCH
T ss_pred             HHHHHHHChH
Confidence            9999999986

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}

Probab=97.68  E-value=3.6e-05  Score=62.29  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=67.2

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|.+.+..|..... ++.+||++++..   ..+++.-+. ++++.+|+.+|+|..||++..+. ..+..+.
T Consensus        36 Dv~l~v~~~~~~~Hk~iL~~~S~-~F~~~f~~~~~e---~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll  109 (172)
T 3htm_A           36 DCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEMEE---SKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDLL  109 (172)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHHHHSCCCG---GGTTEEEEC-SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHH
T ss_pred             ceEEEECCEEEEeeHHHHHHcCH-HHHHHHccCccc---cCCCeEEec-CCCHHHHHHHHHHHhCCCCCCcH-HHHHHHH
Confidence            47888999999999999988754 999999876432   233455554 57999999999999999997655 4577899


Q ss_pred             HHHHhcCCC
Q psy968          247 EACDYLLVP  255 (272)
Q Consensus       247 eE~~Ff~Ip  255 (272)
                      +.+++|+++
T Consensus       110 ~~A~~~~~~  118 (172)
T 3htm_A          110 AAADKYALE  118 (172)
T ss_dssp             HHHHHTTCH
T ss_pred             HHHHHhCcH
Confidence            999999985

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0

Probab=97.58  E-value=0.0001  Score=58.27  Aligned_cols=86  Identities=22%  Similarity=0.395  Sum_probs=64.7

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|...+..|....+ ++.+             ++.-..-.+|++.+|+.+|+|..||++.++. ..+..++
T Consensus        32 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~-------------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll   96 (119)
T 3m5b_A           32 DTLITVGSQEFPAHSLVLAGVSQ-QLGR-------------RGQWALGEGISPSTFAQLLNFVYGESVELQP-GELRPLQ   96 (119)
T ss_dssp             CEEEEETTEEEEECHHHHHTTCG-GGCC-------------CEEEECCSSCCHHHHHHHHHHHTTCCEEECG-GGHHHHH
T ss_pred             ceEEEECCEEEeeEHHHHHHcCH-HHhc-------------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHH
Confidence            47788999999999999988754 4332             1122334578999999999999999998876 4588999


Q ss_pred             HHHHhcCCCCCCcccccccccc
Q psy968          247 EACDYLLVPFDAHTVRCQNLRR  268 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~~l~~  268 (272)
                      +.+++|+|+. ....||+-++.
T Consensus        97 ~aA~~l~i~~-l~~~C~~~~~~  117 (119)
T 3m5b_A           97 EAARALGVQS-LEEACWRARGD  117 (119)
T ss_dssp             HHHHHTTCHH-HHHHHHHHC--
T ss_pred             HHHHHhCCHH-HHHHHHHHHhh
Confidence            9999999964 34556655544

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}

Probab=97.54  E-value=3.7e-05  Score=60.53  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=66.0

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      -|+|.|||+.|.+.+..|..... ++.+||++++..   ..+++.-+. ++++..|+.+|+|..||++..+. .....+.
T Consensus        27 Dv~l~v~~~~~~~Hk~iL~~~S~-~F~~~f~~~~~e---~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll  100 (145)
T 4eoz_A           27 DCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEMEE---SKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDLL  100 (145)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHHHHSSSHH---HHHTEEEEC-SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHH
T ss_pred             ceEEEECCEEEEeehHHHHHcCH-HHHHHHcCCCcC---CCCceEEec-CCCHHHHHHHHHhhccCccCCcH-HHHHHHH
Confidence            47788999999999999988754 999999876431   123445554 47999999999999999997655 3477899


Q ss_pred             HHHHhcCCC
Q psy968          247 EACDYLLVP  255 (272)
Q Consensus       247 eE~~Ff~Ip  255 (272)
                      +.+++|+++
T Consensus       101 ~~A~~~~~~  109 (145)
T 4eoz_A          101 AAADKYALE  109 (145)
T ss_dssp             HHHHHTTCH
T ss_pred             HHHHHhCHH
Confidence            999999985

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A

Probab=97.52  E-value=9.7e-05  Score=65.04  Aligned_cols=84  Identities=20%  Similarity=0.290  Sum_probs=64.6

Q ss_pred             cEEEeeC---CeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEecc-----CCCccchHHHHhhHhCCeeecCC
Q psy968          167 RVTLVVD---NTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAE-----GIPAAVFRAILDYYKGQVIKCPP  238 (272)
Q Consensus       167 rV~LNVG---G~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR-----~idp~vFr~ILnYYRTGkLh~P~  238 (272)
                      -|+|.||   |+.|...+..|..... ++.+||++++..   ..+++.-+..     +|++.+|+.+|+|..||++.++.
T Consensus        34 Dv~l~v~~~~~~~f~~Hr~vLaa~S~-yF~~mf~~~~~e---~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~  109 (279)
T 3i3n_A           34 DITLCFGGAGGREFRAHRSVLAAATE-YFTPLLSGQFSE---SRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST  109 (279)
T ss_dssp             CEEEECC----CEEEECHHHHHHHCT-TSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET
T ss_pred             CeEEEEcCCCCeEEehHHHHHHHcCH-HHHHHhcCCCcc---ccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH
Confidence            4788998   9999999999998865 999999876432   2334555531     78999999999999999998877


Q ss_pred             CCCHHHHHHHHHhcCCC
Q psy968          239 SVSVQELREACDYLLVP  255 (272)
Q Consensus       239 ~vc~~~f~eE~~Ff~Ip  255 (272)
                       ..+..+...+++|+++
T Consensus       110 -~~v~~ll~~A~~l~i~  125 (279)
T 3i3n_A          110 -GSVHEVLELADRFLLI  125 (279)
T ss_dssp             -TTHHHHHHHHHHTTCH
T ss_pred             -HHHHHHHHHHHHHCcH
Confidence             4588999999999985

>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A

Probab=97.30  E-value=6.6e-05  Score=66.42  Aligned_cols=39  Identities=10%  Similarity=0.284  Sum_probs=36.7

Q ss_pred             chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      -++.+|+.||+||++|.+.||+++++.+|.+-++|+-|+
T Consensus        62 RDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~  100 (202)
T 3drx_A           62 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNIT  100 (202)
T ss_dssp             SCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCH
T ss_pred             CChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcH
Confidence            478899999999999999999999999999999999884

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A

Probab=96.87  E-value=0.00044  Score=61.50  Aligned_cols=84  Identities=17%  Similarity=0.253  Sum_probs=64.9

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL  245 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f  245 (272)
                      .-|+|.|+|+.|.+.+..|..... .+.+||.+.+.   ....++.-++ +++|.+|+.+|+|..||++..+. ..+..+
T Consensus       175 ~Dv~l~v~~~~f~~Hk~vLaa~S~-~F~~~f~~~~~---e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~~~~-~~~~~l  248 (312)
T 3hqi_A          175 TDCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEME---ESKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDL  248 (312)
T ss_dssp             CCEEEEETTEEEEECHHHHHHHCH-HHHHHTTC--------CCSEEEEC-SSCHHHHHHHHHHHHHSCCTTHH-HHHHHH
T ss_pred             CceEEEECCEEEeHHHHHHHHcCH-HHHHHhccCcc---ccCCceEEec-CCCHHHHHHHHHhhcCCCCCChH-HHHHHH
Confidence            348889999999999999988754 89999986543   2334556664 58999999999999999985544 346788


Q ss_pred             HHHHHhcCCC
Q psy968          246 REACDYLLVP  255 (272)
Q Consensus       246 ~eE~~Ff~Ip  255 (272)
                      +..+++|+++
T Consensus       249 l~~A~~~~~~  258 (312)
T 3hqi_A          249 LAAADKYALE  258 (312)
T ss_dssp             HHHHHHTTCH
T ss_pred             HHHHHHhCHH
Confidence            9999999985

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=96.36  E-value=0.0018  Score=63.12  Aligned_cols=40  Identities=23%  Similarity=0.374  Sum_probs=37.3

Q ss_pred             CchHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968           22 CKSFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .=++.+|+.||+||++ |.++||+++++..+.|-++|+-|+
T Consensus        98 DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~  138 (514)
T 2r9r_B           98 DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELG  138 (514)
T ss_dssp             CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCC
T ss_pred             cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCC
Confidence            4578999999999999 999999999999999999999885

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A

Probab=90.89  E-value=0.27  Score=37.79  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=34.1

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|++.||
T Consensus        67 l~~~~~~~f~~ll~~~Ytg~~~~~-~~~~~~ll~~A~~~~i~  107 (121)
T 1buo_A           67 LDFLSPKTFQQILEYAYTATLQAK-AEDLDDLLYAAEILEIE  107 (121)
T ss_dssp             ECSSCHHHHHHHHHHHHHSCCCCC-GGGHHHHHHHHHHHTCH
T ss_pred             eCCCCHHHHHHHHHhhcCCCcCCC-HHHHHHHHHHHHHHCCH
Confidence            468999999999999888888643 46789999999998774

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0

Probab=90.83  E-value=0.15  Score=39.87  Aligned_cols=42  Identities=24%  Similarity=0.248  Sum_probs=36.3

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ...||++.+|+++|+|--||.+.-++ -.|.+|-+|+|+|.|+
T Consensus        64 ~l~~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~  105 (119)
T 3m5b_A           64 LGEGISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQ  105 (119)
T ss_dssp             CCSSCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCH
T ss_pred             EeCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCH
Confidence            45799999999999998899887644 5799999999999885

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}

Probab=89.78  E-value=0.24  Score=37.61  Aligned_cols=40  Identities=25%  Similarity=0.348  Sum_probs=34.3

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .++++.+|+++|+|--+|.+.=+ .-.+.+|-+|+|++.||
T Consensus        65 ~~~~~~~f~~ll~~~Yt~~~~~~-~~~v~~ll~~A~~~~i~  104 (116)
T 2vpk_A           65 SQVKADGFQKLLEFIYTGTLNLD-SWNVKEIHQAADYLKVE  104 (116)
T ss_dssp             TTCCHHHHHHHHHHHHHSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred             CCCCHHHHHHHHHHHcCCCcccC-HHHHHHHHHHHHHhCCH
Confidence            38999999999999888988744 45799999999999874

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}

Probab=89.55  E-value=0.28  Score=38.05  Aligned_cols=41  Identities=12%  Similarity=0.105  Sum_probs=35.9

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF   62 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f   62 (272)
                      .++++.+|+++|+|--+|.+.-++. .+.+|-+|+|+|-|+-
T Consensus        75 ~~~~~~~f~~ll~~iYtg~~~i~~~-~~~~ll~~A~~~~i~~  115 (129)
T 3ga1_A           75 AAVQPQSFQQILSFCYTGRLSMNVG-DQDLLMYTAGFLQIQE  115 (129)
T ss_dssp             TTCCHHHHHHHHHHHHHSEEECCTT-THHHHHHHHHHTTBTT
T ss_pred             CCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHHHHHhCCHH
Confidence            4899999999999988898877554 6999999999999875

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}

Probab=88.60  E-value=0.33  Score=37.28  Aligned_cols=41  Identities=20%  Similarity=0.231  Sum_probs=34.6

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.||
T Consensus        64 l~~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~  104 (119)
T 3b84_A           64 LPAGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVP  104 (119)
T ss_dssp             ECGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred             eCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcH
Confidence            4589999999999998889887443 5689999999999875

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A

Probab=88.31  E-value=0.35  Score=37.08  Aligned_cols=42  Identities=12%  Similarity=0.236  Sum_probs=35.7

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ...++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|+|.|+
T Consensus        65 ~l~~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~  106 (119)
T 2q81_A           65 HLDISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQ  106 (119)
T ss_dssp             GGGGCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred             EeCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCH
Confidence            34678999999999998889887665 4799999999999875

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A

Probab=88.00  E-value=0.22  Score=38.32  Aligned_cols=42  Identities=26%  Similarity=0.214  Sum_probs=35.3

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-.+.-.+.+|-+|+|+|-||
T Consensus        70 l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~  111 (116)
T 3fkc_A           70 LSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVK  111 (116)
T ss_dssp             ECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCH
T ss_pred             eCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCcc
Confidence            468999999999999889988334556789999999999876

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A

Probab=87.84  E-value=0.33  Score=36.93  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=34.4

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.|+
T Consensus        69 l~~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~  109 (120)
T 2if5_A           69 IDFVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIP  109 (120)
T ss_dssp             CCSSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCH
T ss_pred             eCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCH
Confidence            4589999999999997788877543 4789999999999875

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}

Probab=87.58  E-value=0.46  Score=37.98  Aligned_cols=41  Identities=34%  Similarity=0.421  Sum_probs=34.9

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|+|.|+
T Consensus        93 l~~v~~~~f~~lL~fiYtg~~~i~-~~~v~~ll~~A~~l~i~  133 (144)
T 2ppi_A           93 LEGISVMVMREILDYIFSGQIRLN-EDTIQDVVQAADLLLLT  133 (144)
T ss_dssp             CCSSCHHHHHHHHHHHTTSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred             eCCCCHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhCcH
Confidence            458999999999999888988644 45799999999999875

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}

Probab=86.83  E-value=0.48  Score=35.21  Aligned_cols=42  Identities=19%  Similarity=0.158  Sum_probs=35.3

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ...++++.+|+++|+|--+|.+.-++ -.+.+|-.++|++.+|
T Consensus        54 ~l~~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~   95 (109)
T 2vkp_A           54 HIPDVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVP   95 (109)
T ss_dssp             EETTSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred             EeCCCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcH
Confidence            44689999999999998899886554 6788999999988775

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A

Probab=86.83  E-value=0.45  Score=36.49  Aligned_cols=40  Identities=10%  Similarity=0.164  Sum_probs=34.5

Q ss_pred             CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968           22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF   62 (272)
Q Consensus        22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f   62 (272)
                      ++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|+|.|+-
T Consensus        77 ~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~  116 (125)
T 3ohu_A           77 EVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHN  116 (125)
T ss_dssp             TCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSS
T ss_pred             CCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHH
Confidence            39999999999998889887654 57899999999998873

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A

Probab=86.81  E-value=0.49  Score=36.42  Aligned_cols=40  Identities=13%  Similarity=0.124  Sum_probs=34.3

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|+|.|+
T Consensus        74 ~~~~~~~f~~ll~~~Ytg~~~~~-~~~~~~ll~~A~~~~i~  113 (127)
T 1r29_A           74 PEINPEGFNILLDFMYTSRLNLR-EGNIMAVMATAMYLQME  113 (127)
T ss_dssp             TTSCHHHHHHHHHHHHHSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred             CCCCHHHHHHHHHHHcCCCcCcC-HHHHHHHHHHHHHhCCH
Confidence            78999999999999888887654 35789999999999775

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}

Probab=86.30  E-value=0.51  Score=37.12  Aligned_cols=41  Identities=20%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.-++ -.+.+|.+|+|||.|+
T Consensus        65 l~~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~  105 (135)
T 2yy9_A           65 LPAGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVP  105 (135)
T ss_dssp             ECGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred             eCCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcH
Confidence            4689999999999998888886544 5699999999999874

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}

Probab=84.07  E-value=0.57  Score=36.15  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=35.3

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF   62 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f   62 (272)
                      .+|++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.||-
T Consensus        73 ~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~  113 (124)
T 2ihc_A           73 EEVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHN  113 (124)
T ss_dssp             TTSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSS
T ss_pred             CCcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHH
Confidence            589999999999998888886554 46999999999998874

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}

Probab=82.98  E-value=0.7  Score=35.75  Aligned_cols=41  Identities=12%  Similarity=0.076  Sum_probs=33.4

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.- +.-.+.+|-+++|++.+|
T Consensus        69 l~~~~~~~~~~~l~~~Y~~~~~~-~~~~~~~ll~~A~~~~~~  109 (145)
T 4eoz_A           69 INDVEPEVFKEMMCFIYTGKAPN-LDKMADDLLAAADKYALE  109 (145)
T ss_dssp             ECSSCHHHHHHHHHHHHHSCCTT-GGGTHHHHHHHHHHTTCH
T ss_pred             ecCCCHHHHHHHHHhhccCccCC-cHHHHHHHHHHHHHhCHH
Confidence            35799999999999988888763 345678899999998774

>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*

Probab=82.73  E-value=1.5  Score=33.11  Aligned_cols=77  Identities=21%  Similarity=0.310  Sum_probs=51.0

Q ss_pred             eCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHh-----C---Ceee---cCCCC
Q psy968          172 VDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYK-----G---QVIK---CPPSV  240 (272)
Q Consensus       172 VGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYR-----T---GkLh---~P~~v  240 (272)
                      .+|+.|.+.+.. .+... .+..||..... .....+++.-+ .+|++.+.+.|++|..     +   +.+.   +++ .
T Consensus         9 sDg~~F~v~r~v-A~~S~-~ik~m~~~~~~-~~E~~~~~I~l-~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~-~   83 (97)
T 4ajy_C            9 SDGHEFIVKREH-ALTSG-TIKAMLSGPGQ-FAENETNEVNF-REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-E   83 (97)
T ss_dssp             TTCCEEEEEHHH-HTTSH-HHHHHHCCC---------CEEEC-TTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG-G
T ss_pred             cCCcEEEecHHH-HHHhH-HHHHHHHhCCC-ccccCCCceEC-CCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH-H
Confidence            479999999998 55544 77888875211 11122333333 5799999999999987     4   5554   444 2


Q ss_pred             CHHHHHHHHHhcC
Q psy968          241 SVQELREACDYLL  253 (272)
Q Consensus       241 c~~~f~eE~~Ff~  253 (272)
                      .+.++..++.|++
T Consensus        84 ~l~eLl~AAnyL~   96 (97)
T 4ajy_C           84 IALELLMAANFLD   96 (97)
T ss_dssp             GHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhhC
Confidence            3678899999876

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B

Probab=82.63  E-value=0.79  Score=39.34  Aligned_cols=42  Identities=33%  Similarity=0.419  Sum_probs=35.7

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ...|+++.+|+++|+|--+|.+..++ -.+.+|-+|+|+|.||
T Consensus        76 ~l~~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~  117 (256)
T 3hve_A           76 ELEGISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLT  117 (256)
T ss_dssp             ECSSCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCH
T ss_pred             EeCCCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChH
Confidence            34689999999999999999998765 5799999999998876

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}

Probab=81.07  E-value=0.88  Score=36.19  Aligned_cols=41  Identities=12%  Similarity=0.076  Sum_probs=33.8

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|+++|+|--+|.+.- +.-.+.+|-+++|++.+|
T Consensus        78 l~~~~~~~f~~~l~~~Yt~~~~~-~~~~~~~ll~~A~~~~~~  118 (172)
T 3htm_A           78 INDVEPEVFKEMMCFIYTGKAPN-LDKMADDLLAAADKYALE  118 (172)
T ss_dssp             ECSSCHHHHHHHHHHHHHSCCTT-GGGTHHHHHHHHHHTTCH
T ss_pred             ecCCCHHHHHHHHHHHhCCCCCC-cHHHHHHHHHHHHHhCcH
Confidence            35899999999999988888763 345688899999998775

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}

Probab=80.57  E-value=1.3  Score=34.73  Aligned_cols=40  Identities=15%  Similarity=0.188  Sum_probs=33.9

Q ss_pred             cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      .+|++.+|+++|+|--+|.+.=++ -.|.+|-+|+|+|.|+
T Consensus        80 ~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~  119 (138)
T 2z8h_A           80 EEVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVH  119 (138)
T ss_dssp             TTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCG
T ss_pred             CCCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCH
Confidence            589999999999998888876443 4689999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d1t1da_	100	d.42.1.2 (A:) Shaker potassium channel {California	3e-14
d3kvta_	103	d.42.1.2 (A:) akv3.1 voltage-gated potassium chann	1e-12
d1nn7a_	105	d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus	2e-12

>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Length = 100

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Shaker potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

 Score = 64.8 bits (158), Expect = 3e-14
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAI 225
           ERV + V   RF         +P+T+LG      R   +   R EY          F AI
Sbjct: 1   ERVVINVSGLRFETQLKTLNQFPDTLLGNPQK--RNRYYDPLRNEYFFDR--NRPSFDAI 56

Query: 226 LDYYK-GQVIKCPPSVSVQELREACDY 251
           L +Y+ G  ++ P +V +    E   +
Sbjct: 57  LYFYQSGGRLRRPVNVPLDVFSEEIKF 83

>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Length = 103

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: akv3.1 voltage-gated potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

 Score = 60.7 bits (147), Expect = 1e-12
 Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 165 EERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRA 224
           E RV + V   R     A     P T L R+        +     EY         VF  
Sbjct: 1   ENRVIINVGGIRHETYKATLKKIPATRLSRLTE--GMLNYDPVLNEYFFDR--HPGVFAQ 56

Query: 225 ILDYYKGQVIKCPPSVSVQELREACDY 251
           I++YY+   +  P  V      E  ++
Sbjct: 57  IINYYRSGKLHYPTDVCGPLFEEELEF 83

>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 105

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Potassium channel kv4.2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.9 bits (145), Expect = 2e-12
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 168 VTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILD 227
           + L V  TRF         YP+T+LG      R+F +  +  +Y         +FR IL+
Sbjct: 2   IVLNVSGTRFQTWQDTLERYPDTLLGSSE---RDFFYHPETQQYFFDR--DPDIFRHILN 56

Query: 228 YYKGQVIKCPPSVSVQELREACDY 251
           +Y+   +  P    +    E   +
Sbjct: 57  FYRTGKLHYPRHECISAYDEELAF 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d3kvta_	103	akv3.1 voltage-gated potassium channel {California	99.97
d1nn7a_	105	Potassium channel kv4.2 {Rat (Rattus norvegicus) [	99.96
d1t1da_	100	Shaker potassium channel {California sea hare (Apl	99.95
d1r29a_	122	B-cell lymphoma 6 (Bcl6) protein BTB domain {Human	98.14
d1buoa_	121	Promyelocytic leukaemia zinc finger (PLZF) protein	97.85
d1nn7a_	105	Potassium channel kv4.2 {Rat (Rattus norvegicus) [	97.6
d3kvta_	103	akv3.1 voltage-gated potassium channel {California	97.29
d1t1da_	100	Shaker potassium channel {California sea hare (Apl	97.22
d1r29a_	122	B-cell lymphoma 6 (Bcl6) protein BTB domain {Human	91.09
d1buoa_	121	Promyelocytic leukaemia zinc finger (PLZF) protein	89.79

>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: akv3.1 voltage-gated potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

Probab=99.97  E-value=5.1e-31  Score=207.70  Aligned_cols=97  Identities=22%  Similarity=0.275  Sum_probs=91.1

Q ss_pred             CCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHH
Q psy968          165 EERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQE  244 (272)
Q Consensus       165 ~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~  244 (272)
                      +++|+|||||++|+|+++||.++|+|+|++|++...  .+++++|+|||||  ||.+|++||||||+|+|++|++++...
T Consensus         1 ~~rI~LNVGG~~F~t~~~tL~~~~~s~l~~~~~~~~--~~~~~~~~~fiDR--dp~~F~~IL~ylR~g~l~~p~~~~~~~   76 (103)
T d3kvta_           1 ENRVIINVGGIRHETYKATLKKIPATRLSRLTEGML--NYDPVLNEYFFDR--HPGVFAQIINYYRSGKLHYPTDVCGPL   76 (103)
T ss_dssp             CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTST--TEETTTTEEEECS--CTTTHHHHHHHHHHSCBCCCSSSCHHH
T ss_pred             CCEEEEEECCEEEEEeHHHHhhCccchhHHHHcCCC--ccCCCCCcEEecC--CHHHHHHHHHHHccCCcccccccCHHH
Confidence            479999999999999999999999999999987543  3578899999999  999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCccccccc
Q psy968          245 LREACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       245 f~eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      |.+||+||+|+...+..||+.
T Consensus        77 l~~Ea~yygi~~~~l~~Cc~~   97 (103)
T d3kvta_          77 FEEELEFWGLDSNQVEPCCWM   97 (103)
T ss_dssp             HHHHHHHHTCCGGGBCGGGSH
T ss_pred             HHHHHHHcCCCHHHHHHHhHH
Confidence            999999999999999999985

>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Potassium channel kv4.2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=4.6e-30  Score=203.05  Aligned_cols=94  Identities=21%  Similarity=0.355  Sum_probs=88.2

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      .|+|||||++|+|+++||.++|+|+||+|++.   ..+++++|||||||  ||.+|++||||||+|+|++|+++|...|.
T Consensus         1 iI~LNVGG~~f~t~~~TL~~~p~s~l~~~~~~---~~~~~~~~~~FiDR--dp~~F~~IL~ylR~G~l~~p~~~~~~~l~   75 (105)
T d1nn7a_           1 LIVLNVSGTRFQTWQDTLERYPDTLLGSSERD---FFYHPETQQYFFDR--DPDIFRHILNFYRTGKLHYPRHECISAYD   75 (105)
T ss_dssp             CEEEEETTEEEEECHHHHHTSCSSSTTSGGGG---GGEEGGGTEEEECS--CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred             CEEEEECCEEEEEeHHHHhcCCCCCccccccc---cCcCCCCCcEEEeC--CHHHHHHHHHHHhcCccccCCCccHHHHH
Confidence            48999999999999999999999999998653   24678999999999  99999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccccccc
Q psy968          247 EACDYLLVPFDAHTVRCQN  265 (272)
Q Consensus       247 eE~~Ff~Ip~~~~~~cC~~  265 (272)
                      +||+||||+...+..||..
T Consensus        76 ~Ea~fygi~~~~l~~cc~~   94 (105)
T d1nn7a_          76 EELAFFGLIPEIIGDCCYE   94 (105)
T ss_dssp             HHHHHHTCCSCCBCHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHHH
Confidence            9999999999999999975

>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Shaker potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

Probab=99.95  E-value=7.6e-29  Score=194.88  Aligned_cols=87  Identities=25%  Similarity=0.384  Sum_probs=81.3

Q ss_pred             CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCCCHHH
Q psy968          166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSVSVQE  244 (272)
Q Consensus       166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~vc~~~  244 (272)
                      ++|+|||||++|+|+++||.++|+|+||+|++...  .+++++|+|||||  ||.+|++||||||| |.+++|++.|...
T Consensus         1 drI~LNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~--~~~~~~g~~FiDR--dp~~F~~IL~flR~~~~l~~~~~~~~~~   76 (100)
T d1t1da_           1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRNR--YYDPLRNEYFFDR--NRPSFDAILYFYQSGGRLRRPVNVPLDV   76 (100)
T ss_dssp             CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGG--GEETTTTEEEECS--CSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred             CeEEEEECCEEEEEeHHHHhhCCCchhHHHHhCCC--cCCCCCCeEEEec--CHHHHHHHHHHHhcCCCcCCCCcccHHH
Confidence            68999999999999999999999999999997543  3689999999999  99999999999998 7999999999999


Q ss_pred             HHHHHHhcCCCC
Q psy968          245 LREACDYLLVPF  256 (272)
Q Consensus       245 f~eE~~Ff~Ip~  256 (272)
                      |.+||+||||+.
T Consensus        77 l~~Ea~y~gi~~   88 (100)
T d1t1da_          77 FSEEIKFYELGE   88 (100)
T ss_dssp             HHHHHHHTTCCH
T ss_pred             HHHHHHHcCCCH
Confidence            999999999974

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1.4e-06  Score=66.98  Aligned_cols=83  Identities=14%  Similarity=0.266  Sum_probs=67.6

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      =|+|.|+|++|.+.+..|....+ .+.+||.+.+.    ........+-+|+|..|+.||+|..||++.++.+ .+..++
T Consensus        27 Dv~l~v~~~~~~~Hk~vLa~~S~-~F~~~f~~~~~----e~~~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~-~v~~ll  100 (122)
T d1r29a_          27 DVVIVVSREQFRAHKTVLMACSG-LFYSIFTDQLK----RNLSVINLDPEINPEGFNILLDFMYTSRLNLREG-NIMAVM  100 (122)
T ss_dssp             CEEEEETTEEEEECHHHHHHHCH-HHHHHHTSTTT----TTCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTT-THHHHH
T ss_pred             EEEEEECCEEEEEehHHhhhCCH-HHHHHhccchh----hhcceeeeecccCHHHHHHHHhhhcCCeecCchh-hHHHHH
Confidence            36677999999999999998865 88999976543    2223344556789999999999999999988764 688999


Q ss_pred             HHHHhcCCC
Q psy968          247 EACDYLLVP  255 (272)
Q Consensus       247 eE~~Ff~Ip  255 (272)
                      ..++||+|+
T Consensus       101 ~~A~~l~i~  109 (122)
T d1r29a_         101 ATAMYLQME  109 (122)
T ss_dssp             HHHHHTTCH
T ss_pred             HHHHHHCcH
Confidence            999999985

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.7e-06  Score=65.24  Aligned_cols=79  Identities=18%  Similarity=0.391  Sum_probs=65.1

Q ss_pred             cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968          167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR  246 (272)
Q Consensus       167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~  246 (272)
                      =|+|.|+|+.|.+.+..|....+ ++.+||+++..        +.-+ .+|+|.+|+.+|+|..||++.++. ..+..+.
T Consensus        30 Dv~l~v~~~~~~aHk~vLaa~S~-~F~~lf~~~~~--------~i~~-~~v~~~~f~~ll~~~Ytg~i~l~~-~~v~~ll   98 (121)
T d1buoa_          30 DVVIMVDSQEFHAHRTVLACTSK-MFEILFHRNSQ--------HYTL-DFLSPKTFQQILEYAYTATLQAKA-EDLDDLL   98 (121)
T ss_dssp             CEEEEESSCEEEECHHHHHHHCH-HHHHHTTSCCS--------EEEE-CSSCHHHHHHHHHHHHHSCCCCCG-GGHHHHH
T ss_pred             eEEEEECCEEEEEEHHHhcccCh-hhhhhccCccc--------eeec-CCCCHHHHHHHHHheEccccCCcH-HHHHHHH
Confidence            47778999999999999988855 89999876432        2333 358999999999999999998776 4688999


Q ss_pred             HHHHhcCCCC
Q psy968          247 EACDYLLVPF  256 (272)
Q Consensus       247 eE~~Ff~Ip~  256 (272)
                      ..+++|+++.
T Consensus        99 ~~A~~l~~~~  108 (121)
T d1buoa_          99 YAAEILEIEY  108 (121)
T ss_dssp             HHHHHHTCHH
T ss_pred             HHHHHhCCHH
Confidence            9999999965

>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Potassium channel kv4.2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.60  E-value=9.6e-06  Score=62.34  Aligned_cols=39  Identities=18%  Similarity=0.430  Sum_probs=36.9

Q ss_pred             chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      =++.+|+.||+||++|.+++|+.+.++.|.+-++|+-|+
T Consensus        46 Rdp~~F~~IL~ylR~G~l~~p~~~~~~~l~~Ea~fygi~   84 (105)
T d1nn7a_          46 RDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLI   84 (105)
T ss_dssp             SCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHHhcCccccCCCccHHHHHHHHHHcCCC
Confidence            378899999999999999999999999999999999986

>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: akv3.1 voltage-gated potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

Probab=97.29  E-value=3.9e-05  Score=58.57  Aligned_cols=39  Identities=21%  Similarity=0.418  Sum_probs=36.9

Q ss_pred             chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      =++.+|+.||+||++|.+..|+.+.+..|.+-++|+-||
T Consensus        49 Rdp~~F~~IL~ylR~g~l~~p~~~~~~~l~~Ea~yygi~   87 (103)
T d3kvta_          49 RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLD   87 (103)
T ss_dssp             SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHHccCCcccccccCHHHHHHHHHHcCCC
Confidence            478899999999999999999999999999999999986

>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: Tetramerization domain of potassium channels
domain: Shaker potassium channel
species: California sea hare (Aplysia californica) [TaxId: 6500]

Probab=97.22  E-value=5.8e-05  Score=57.53  Aligned_cols=38  Identities=21%  Similarity=0.388  Sum_probs=35.3

Q ss_pred             hHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968           24 SFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        24 s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ++.+|+.||+||++ |.+.+|+.+.++.|.+.++|+-|+
T Consensus        49 dp~~F~~IL~flR~~~~l~~~~~~~~~~l~~Ea~y~gi~   87 (100)
T d1t1da_          49 NRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELG   87 (100)
T ss_dssp             CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHhcCCCcCCCCcccHHHHHHHHHHcCCC
Confidence            67899999999997 799999999999999999999774

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.076  Score=39.56  Aligned_cols=41  Identities=12%  Similarity=0.083  Sum_probs=35.7

Q ss_pred             ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      ..++++.+|.++|+|--+|-+.-+. -.|.+|-+|++||-||
T Consensus        69 ~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~  109 (122)
T d1r29a_          69 DPEINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQME  109 (122)
T ss_dssp             CTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred             ecccCHHHHHHHHhhhcCCeecCch-hhHHHHHHHHHHHCcH
Confidence            4689999999999999999886554 4799999999999885

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.079  Score=39.90  Aligned_cols=42  Identities=24%  Similarity=0.285  Sum_probs=36.0

Q ss_pred             cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968           19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP   61 (272)
Q Consensus        19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~   61 (272)
                      +..++++.+|.++|+|-=||.+.-++ -.+.+|.+|+|||-+|
T Consensus        66 ~~~~v~~~~f~~ll~~~Ytg~i~l~~-~~v~~ll~~A~~l~~~  107 (121)
T d1buoa_          66 TLDFLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIE  107 (121)
T ss_dssp             EECSSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCH
T ss_pred             ecCCCCHHHHHHHHHheEccccCCcH-HHHHHHHHHHHHhCCH
Confidence            34689999999999998899987544 5899999999999885