Psyllid ID: psy9819

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
Protein Sequence
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Secondary Structure (PSIPRED)
ccEEEEEcccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccEEEEccccccccccccccccccccccccccccccEEEEEcccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccEEEccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccEEcc
Coil and Loop (DISEMBL)
MSIIFRIsglttakddaLSRCTVLLLYIFNASLCYnkciygyckgppdyscqcelgwtgvdcsvnclcnnhstcvhgigicdechdwttgdhcqycragsygnattqegcrkcdcnshgnsvlgvcdsitgecicqdntqgkncerclpgyygdptdggtcyyqcmargmltgpgpqglgsglaernawegkdtpsreCLWIIGqsldsnstapaDIILLrlqpdinvpcnenavyiydglpdfvtsvggthqsttlgvfctedMHRGYEVLEaksgvmtihykqgkpsegfnatyqifscpdkcpenrtcinnqcvcpprrtgpdcqeeicpnecheflnhgtcdllltgvhithgrtlHYQVDLIRCtcrqvyli
Flexible Loop (DISEMBL)
msiifrisglttakddalsRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Low Complexity Region (SEG)
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Disordered region (IsUnstruct)
**IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG**********************SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYL*
Disordered Region (DISOPRED)
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Disordered Region (DISEMBL)
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Disordered Region (DISPRO)
*SI*F*ISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	377	2.2.26 [Sep-21-2011]
Q7Z7M0	2845	Multiple epidermal growth	yes	N/A	0.835	0.110	0.357	8e-55
Q9QYP0	2788	Multiple epidermal growth	yes	N/A	0.835	0.112	0.36	3e-54
P60882	2789	Multiple epidermal growth	yes	N/A	0.835	0.112	0.354	5e-53
Q16363	1823	Laminin subunit alpha-4 O	no	N/A	0.416	0.086	0.336	1e-14
P97927	1816	Laminin subunit alpha-4 O	no	N/A	0.403	0.083	0.340	3e-14
Q19981	1329	Putative protein tag-53 O	yes	N/A	0.342	0.097	0.326	1e-13
Q61789	3333	Laminin subunit alpha-3 O	no	N/A	0.310	0.035	0.436	3e-13
Q9WU60	1428	Attractin OS=Mus musculus	no	N/A	0.342	0.090	0.333	5e-12
Q99J86	1432	Attractin OS=Rattus norve	no	N/A	0.342	0.090	0.327	1e-11
Q16787	3333	Laminin subunit alpha-3 O	no	N/A	0.254	0.028	0.450	2e-11

>sp|Q7Z7M0|MEGF8_HUMAN Multiple epidermal growth factor-like domains protein 8 OS=Homo sapiens GN=MEGF8 PE=1 SV=2

 Score =  214 bits (545), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 174/350 (49%), Gaps = 35/350 (10%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
            C   C +G C GPPD++C C+LGWT                CS +C C+ HS C   G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPG 1177

Query: 80   ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
             CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct: 1178 FCDECQDWTWGEHCERCRPGSFGNATGSRGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237

Query: 140  QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE- 198
            +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS         G        
Sbjct: 1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1297

Query: 199  ----CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                C+W++  + +    AP  +   + L   PD + PC  + V  +DG P F+ +    
Sbjct: 1298 GLSYCVWVVSATEELQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357

Query: 252  HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
               + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416

Query: 307  ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
              + C+          C CP    GP C+  +CP  C+     GTC+  L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGTCNQSL 1466

Homo sapiens (taxid: 9606)

>sp|Q9QYP0|MEGF8_RAT Multiple epidermal growth factor-like domains protein 8 OS=Rattus norvegicus GN=Megf8 PE=2 SV=2

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 173/350 (49%), Gaps = 35/350 (10%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
            C   C +G C GPPD++C C+LGWT                CS +C CN HS C   G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPG 1177

Query: 80   ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
             CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237

Query: 140  QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPS--- 196
            +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS         G  T     
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGTARAGP 1297

Query: 197  --RECLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                C+W++  +      AP  +   + L   PD + PC  + V  +DG P F+ +    
Sbjct: 1298 GLSYCVWVVSATEALQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357

Query: 252  HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
               + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416

Query: 307  ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
              + C+          C CP    GP C+  +CP  C+     G C+  L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL 1466

Rattus norvegicus (taxid: 10116)

>sp|P60882|MEGF8_MOUSE Multiple epidermal growth factor-like domains protein 8 OS=Mus musculus GN=Megf8 PE=2 SV=2

 Score =  208 bits (530), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 171/350 (48%), Gaps = 35/350 (10%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
            C   C +G C GPPD++C C+LGWT                CS +C C+ HS C   G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPG 1177

Query: 80   ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
             CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD++TG C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLTGLCFCQDHT 1237

Query: 140  QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE- 198
            +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS         G        
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGAARAGP 1297

Query: 199  ----CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                C+W++  +       P  +   + L   PD + PC  + V  +DG P F+ +    
Sbjct: 1298 GLSYCVWVVSATEALQPCVPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357

Query: 252  HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
               + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416

Query: 307  ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
              + C+          C CP    GP C+  +CP  C+     G C+  L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL 1466

Mus musculus (taxid: 10090)

>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 81/187 (43%), Gaps = 30/187 (16%)

Query: 37  KCIYGYC----KGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG----ICDECHDWT 88
           KC+ GY     +G P +   C        C +  L N   +C    G    IC+E +   
Sbjct: 112 KCLDGYIGDSIRGAPQFCQPCP-------CPLPHLANFAESCYRKNGAVRCICNENY--- 161

Query: 89  TGDHCQYCRAGSYGNAT-TQEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
            G +C+ C  G YGN       C+KCDC  NS  N +   CD +TG+C  C  NT G  C
Sbjct: 162 AGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKC 221

Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPS---RECL 200
           ERC PGYYGD      C   C   G   GP     G  L E      G D P+    +C+
Sbjct: 222 ERCAPGYYGDARIAKNCAV-CNCGG---GPCDSVTGECLEEGFEPPTGMDCPTISCDKCV 277

Query: 201 WIIGQSL 207
           W +  +L
Sbjct: 278 WDLTDAL 284

Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.

Homo sapiens (taxid: 9606)

>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2

 Score = 79.7 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 63/185 (34%), Positives = 79/185 (42%), Gaps = 33/185 (17%)

Query: 37  KCIYGYC----KGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG----ICDECHDWT 88
           KC+ GY     +G P +   C        C +  L N   +C    G    IC E +   
Sbjct: 112 KCLDGYIGDSIRGTPRFCQPCP-------CPLPHLANFAESCYRKNGAVRCICKENY--- 161

Query: 89  TGDHCQYCRAGSYGNAT-TQEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
            G +C+ C  G YGN       C+KCDC  NS  N +   CD ITG+C  C  NT G  C
Sbjct: 162 VGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKC 221

Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPS--RECLWI 202
           ERC PGYYGD      C   C   G   GP     G  L      EG + P+   +C+W 
Sbjct: 222 ERCAPGYYGDARTAKNCAV-CNCGG---GPCDSVTGECLE-----EGFEVPTGCDKCVWD 272

Query: 203 IGQSL 207
           +   L
Sbjct: 273 LTDDL 277

Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.

Mus musculus (taxid: 10090)

>sp|Q19981|TAG53_CAEEL Putative protein tag-53 OS=Caenorhabditis elegans GN=tag-53 PE=1 SV=3

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 15/144 (10%)

Query: 38   CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG--------ICDECHDWTT 89
            CI G   GP +   +    W  +DC   C CN HSTC   +G         C  C + TT
Sbjct: 919  CIRGTSTGPLEPKPE-NSTWYFIDCPA-CQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTT 976

Query: 90   GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCL 148
            G HC+ C  G YG+A     C  CDC+   +    +CD ++G+C C+     G  C++C 
Sbjct: 977  GAHCERCAPGFYGDARNGGVCSPCDCHHQAD----MCDPVSGQCFCKTKGVTGDRCDKCE 1032

Query: 149  PGYYGDPTDGGTCYYQCMARGMLT 172
              Y G+P +G  C+Y+     + T
Sbjct: 1033 AKYVGNPRNGTPCFYELAVDFIFT 1056

Caenorhabditis elegans (taxid: 6239)

>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 67/133 (50%), Gaps = 16/133 (12%)

Query: 43   CKGPPDY---SCQ-CELGWTGVDCS------VNCLCNNHST-CVHGIGICDECHDWTTGD 91
            C  PPDY   SCQ C  G+   + S      V C CN HS  C  G GIC  C   T G+
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCNGHSNRCQDGSGICINCQHNTAGE 1713

Query: 92   HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLP 149
            HC+ C+AG YGNA     CR C C  H NS    C  D     C C+    G  CERC P
Sbjct: 1714 HCERCQAGHYGNA-IHGSCRVCPC-PHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAP 1771

Query: 150  GYYGDPTD-GGTC 161
            GY+G+P   GG+C
Sbjct: 1772 GYFGNPQKFGGSC 1784

Laminin-5 is thought to be involved in (1) cell adhesion via integrin alpha-3/beta-1 in focal adhesion and integrin alpha-6/beta-4 in hemidesmosomes, (2) signal transduction via tyrosine phosphorylation of pp125-FAK and p80, (3) differentiation of keratinocytes.

Mus musculus (taxid: 10090)

>sp|Q9WU60|ATRN_MOUSE Attractin OS=Mus musculus GN=Atrn PE=2 SV=3

 Score = 72.8 bits (177), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 30/159 (18%)

Query: 37   KCIYGYCKGPPDYSCQCELG--------------------WTGVDCSVNCLCNNHSTCVH 76
            KCI G  KGP     Q   G                    W+ + C   C CN HS C++
Sbjct: 1014 KCIEGSYKGPVKMPSQASAGNVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCIN 1072

Query: 77   GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
               IC++C D TTG HC+ C +G YG+ T    C+ C CN H +    +C++ TG+C C 
Sbjct: 1073 Q-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS----LCNTNTGKCFCT 1127

Query: 137  DN-TQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
                +G  C+ C     Y G+P   GTCYY  +     T
Sbjct: 1128 TKGVKGDECQLCEVENRYQGNPLK-GTCYYTLLIDYQFT 1165

Involved in the initial immune cell clustering during inflammatory response and may regulate chemotactic activity of chemokines (By similarity). May play a role in melanocortin signaling pathways that regulate energy homeostasis and hair color. Low-affinity receptor for agouti. Has a critical role in normal myelination in the central nervous system.

Mus musculus (taxid: 10090)

>sp|Q99J86|ATRN_RAT Attractin OS=Rattus norvegicus GN=Atrn PE=2 SV=1

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 30/159 (18%)

Query: 37   KCIYGYCKGPPDYSCQCELG--------------------WTGVDCSVNCLCNNHSTCVH 76
            KCI G  KGP         G                    W+ + C   C CN HS C++
Sbjct: 1018 KCIEGSYKGPVKMPSHASTGNVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCIN 1076

Query: 77   GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
               IC++C D TTG HC+ C +G YG+ T    C+ C CN H +    +C++ TG+C C 
Sbjct: 1077 Q-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS----LCNTNTGKCFCT 1131

Query: 137  DN-TQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
                +G+ C+ C     Y G+P   GTCYY  +     T
Sbjct: 1132 TKGVKGEECQLCEVENRYQGNPLK-GTCYYTLLIDYQFT 1169

Involved in the initial immune cell clustering during inflammatory response and may regulate chemotactic activity of chemokines (By similarity). May play a role in melanocortin signaling pathways that regulate energy homeostasis and hair color. Low-affinity receptor for agouti (By similarity). Has a critical role in normal myelination in the central nervous system.

Rattus norvegicus (taxid: 10116)

>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 64   VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
            V C CN HS  C  G GIC  C   T G+HC+ C+ G YGNA     CR C C  H NS 
Sbjct: 1685 VPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNA-VHGSCRACPC-PHTNSF 1742

Query: 123  LGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTD-GGTC 161
               C    G+  C C+    G  CERC PGY+G+P   GG+C
Sbjct: 1743 ATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSC 1784

Laminin-5 is thought to be involved in (1) cell adhesion via integrin alpha-3/beta-1 in focal adhesion and integrin alpha-6/beta-4 in hemidesmosomes, (2) signal transduction via tyrosine phosphorylation of pp125-FAK and p80, (3) differentiation of keratinocytes.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
307200226	3025	Multiple epidermal growth factor-like do	0.822	0.102	0.551	5e-93
383864510	3039	PREDICTED: LOW QUALITY PROTEIN: multiple	0.822	0.102	0.551	3e-92
322792677	2797	hypothetical protein SINV_14129 [Solenop	0.822	0.110	0.542	3e-92
380013693	3035	PREDICTED: multiple epidermal growth fac	0.822	0.102	0.542	1e-91
350401390	3022	PREDICTED: multiple epidermal growth fac	0.822	0.102	0.548	2e-91
340729098	3028	PREDICTED: multiple epidermal growth fac	0.822	0.102	0.548	2e-91
307181027	3047	Multiple epidermal growth factor-like do	0.822	0.101	0.542	3e-90
345483939	3046	PREDICTED: multiple epidermal growth fac	0.822	0.101	0.526	6e-87
157104723	2895	hypothetical protein AaeL_AAEL014347 [Ae	0.814	0.106	0.515	1e-86
170046046	2862	laminin subunit gamma-3 [Culex quinquefa	0.809	0.106	0.514	6e-84

>gi|307200226|gb|EFN80520.1| Multiple epidermal growth factor-like domains 8 [Harpegnathos saltator]

 Score =  347 bits (890), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 177/321 (55%), Positives = 217/321 (67%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY  C+ GYC   P+Y C+C LGWTG DC  NC C NHSTC+ G+GICDEC DWTTGD C
Sbjct: 1337 CYEICVNGYCSEAPEYKCECNLGWTGSDCRNNCGCFNHSTCLQGVGICDECQDWTTGDFC 1396

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGSYGNATT  GCR+C+CN HG+  LGVCD  TG C C+DNT+G  C+RC  GYYG
Sbjct: 1397 EECKAGSYGNATTPLGCRECNCNGHGDVELGVCDRQTGVCFCRDNTEGDTCQRCKRGYYG 1456

Query: 154  DPTDGGTCYYQCMARGML--TGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIG--QSL 207
            DP +GG CYY CM+RGML   G G QGLGS  ++ + W     D+P+RECLWI+    +L
Sbjct: 1457 DPRNGGMCYYGCMSRGMLGGVGNGKQGLGSRHSQSSLWGNHMGDSPTRECLWIVSPETNL 1516

Query: 208  DSNSTAPA--DIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
             S++T P    +I   +  DINV C EN+VY+YDGLP+FV+S GG HQS  LGV+CTE  
Sbjct: 1517 SSDATTPTIQSVIQFTIHDDINVSCQENSVYVYDGLPEFVSSSGG-HQSQLLGVYCTEST 1575

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y + +C + CPENR C N  C+C P   G 
Sbjct: 1576 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYVVMTC-NNCPENRECRNGNCLCKPGFFGI 1633

Query: 326  DCQEEICPNECHEFLNHGTCD 346
            +C  EICP+ C      G CD
Sbjct: 1634 ECNVEICPDNCTAAKKRGVCD 1654

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864510|ref|XP_003707721.1| PREDICTED: LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 8-like [Megachile rotundata]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 177/321 (55%), Positives = 211/321 (65%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY KC+ GYC   PDY C+C LGWTG DC  NC C NHSTCV G GICDEC DWTTG +C
Sbjct: 1351 CYEKCVNGYCSEAPDYKCECYLGWTGPDCRTNCGCYNHSTCVQGPGICDECQDWTTGRYC 1410

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
              C+AGSYGNATT  GC+KC+CN HG+  LG+CD  TG C C+DNTQG  C+RC  GYYG
Sbjct: 1411 AECKAGSYGNATTPLGCKKCNCNEHGDKDLGICDRQTGVCFCRDNTQGDMCQRCKKGYYG 1470

Query: 154  DPTDGGTCYYQCMARGML--TGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIGQSLDS 209
            DP DGG CYY CM+RGML   G G QGLGS  ++ + WE    D+P+RECLWI+    D 
Sbjct: 1471 DPRDGGMCYYGCMSRGMLGGEGAGKQGLGSRHSQLSLWESHFGDSPTRECLWIVSPKTDL 1530

Query: 210  NS----TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            +S    +    +I   +  DINV C EN+VY+YDGLP+FV+S   +HQS  LGV+CTE  
Sbjct: 1531 SSDTMLSGTQSVIQFTIHSDINVSCQENSVYVYDGLPEFVSS-STSHQSQLLGVYCTEST 1589

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y I +C + CP NR C N  C+C     G 
Sbjct: 1590 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYLIMTC-NNCPGNRECRNGNCLCKTGFVGI 1647

Query: 326  DCQEEICPNECHEFLNHGTCD 346
            +C  EICPN C      G CD
Sbjct: 1648 NCDIEICPNNCTSSKKQGVCD 1668

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792677|gb|EFZ16551.1| hypothetical protein SINV_14129 [Solenopsis invicta]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 215/321 (66%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY +C+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICDEC DWTTG +C
Sbjct: 1104 CYERCVNGYCSEAPDYKCECNLGWTGPDCRTNCGCYNHSTCLQGPGICDECQDWTTGRYC 1163

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGSYGNATT  GCRKC+CN HG+  LG+CD  TG C C+DNT+G  C+RC   YYG
Sbjct: 1164 EECKAGSYGNATTPLGCRKCNCNGHGDVTLGICDQQTGMCFCRDNTEGDKCQRCKRDYYG 1223

Query: 154  DPTDGGTCYYQCMARGMLTGP--GPQGLGSGLAERNAWEGK--DTPSRECLWIIGQ---- 205
            DP +GG CYY CM+RGML G   G QGLGS  ++ + W+    D+P+RECLWI+      
Sbjct: 1224 DPRNGGMCYYGCMSRGMLGGEETGKQGLGSRHSQSSLWDNYMGDSPTRECLWIVSPETDL 1283

Query: 206  SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            SLD+ ++A   +I   +  DINV C EN+VY+YDGLP+FV+S GG HQS  LGV+CTE  
Sbjct: 1284 SLDATTSAIQSVIQFTIHDDINVSCQENSVYVYDGLPEFVSSTGG-HQSQLLGVYCTEST 1342

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
            +    V EAKSG +T+HYKQ    EGFNA+Y I +C + CP NR C N  C+C     G 
Sbjct: 1343 NYPVTV-EAKSGFLTVHYKQLDEVEGFNASYVIMTC-NNCPGNRECRNGNCLCKSGYVGI 1400

Query: 326  DCQEEICPNECHEFLNHGTCD 346
            +C  E CP+ C      G CD
Sbjct: 1401 NCDVETCPDNCTASEKRGVCD 1421

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013693|ref|XP_003690884.1| PREDICTED: multiple epidermal growth factor-like domains protein 8 [Apis florea]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 213/321 (66%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY KC+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICD+C DWTTG +C
Sbjct: 1343 CYEKCVNGYCSEAPDYKCECNLGWTGPDCRTNCGCYNHSTCIQGPGICDKCQDWTTGTYC 1402

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGS+GNATT  GC+KC+CN HG+  L +CD  TG C C+DNTQG  C+RC  GYYG
Sbjct: 1403 EECKAGSFGNATTPLGCKKCNCNEHGDKDLDICDRQTGVCFCRDNTQGDMCQRCKKGYYG 1462

Query: 154  DPTDGGTCYYQCMARGML--TGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIGQSLDS 209
            DP DGG CYY CM+RGML   G G QGLGS  ++ + WE    D+P+RECLWI+    D 
Sbjct: 1463 DPRDGGMCYYSCMSRGMLGGEGNGKQGLGSRHSQLSLWESHFGDSPTRECLWIVSPKTDL 1522

Query: 210  NS----TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            +S    +   ++I   +  DINV C EN+VY+YDGLP+FV+SV  +HQS  LGV+CTE  
Sbjct: 1523 SSDNMLSGIQNVIQFTIHDDINVSCQENSVYVYDGLPEFVSSV-TSHQSQLLGVYCTEST 1581

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y I +C + CP NR C N  C+C     G 
Sbjct: 1582 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYLIMTC-NNCPGNRECRNGNCLCKAGFVGI 1639

Query: 326  DCQEEICPNECHEFLNHGTCD 346
            +C  EICPN C      G CD
Sbjct: 1640 NCDIEICPNNCTSTKKQGICD 1660

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401390|ref|XP_003486136.1| PREDICTED: multiple epidermal growth factor-like domains protein 8-like [Bombus impatiens]

 Score =  342 bits (877), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 209/321 (65%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY KC+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICD+C DWT G +C
Sbjct: 1338 CYEKCVNGYCSEAPDYKCECNLGWTGPDCRTNCGCYNHSTCLQGPGICDKCQDWTNGTYC 1397

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGSYGNATT  GCRKC+CN HG+  LG+CD  TG C C+DNTQG  C+RC  GYYG
Sbjct: 1398 EKCKAGSYGNATTPLGCRKCNCNEHGDKDLGICDRQTGVCFCRDNTQGDMCQRCKKGYYG 1457

Query: 154  DPTDGGTCYYQCMARGML--TGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIGQSLDS 209
            DP DGG CYY CM+RGML   G G QGLGS  ++ + WE    D+P+RECLWI+    D 
Sbjct: 1458 DPRDGGMCYYGCMSRGMLGGEGNGKQGLGSRHSQLSLWESHLGDSPTRECLWIVSPKTDL 1517

Query: 210  NS----TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            +S    +    +I   +  DINV C EN+VY+YDGLP FV+S   +HQS  LGV+CTE  
Sbjct: 1518 SSDNMLSGTQSVIQFTIHDDINVSCQENSVYVYDGLPQFVSS-STSHQSQLLGVYCTEST 1576

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y I +C D CP NR C N  C+C     G 
Sbjct: 1577 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYLIMTCND-CPGNRECRNGNCLCKAGFVGI 1634

Query: 326  DCQEEICPNECHEFLNHGTCD 346
             C  EICPN C      G CD
Sbjct: 1635 SCDIEICPNNCTSSKKQGICD 1655

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729098|ref|XP_003402845.1| PREDICTED: multiple epidermal growth factor-like domains protein 8-like [Bombus terrestris]

 Score =  342 bits (877), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 209/321 (65%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY KC+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICD+C DWT G +C
Sbjct: 1338 CYEKCVNGYCSEAPDYKCECNLGWTGPDCRTNCGCYNHSTCLQGPGICDKCQDWTNGTYC 1397

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGSYGNATT  GCRKC+CN HG+  LG+CD  TG C C+DNTQG  C+RC  GYYG
Sbjct: 1398 EKCKAGSYGNATTPLGCRKCNCNEHGDKDLGICDRQTGICFCRDNTQGDMCQRCKKGYYG 1457

Query: 154  DPTDGGTCYYQCMARGML--TGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIGQSLDS 209
            DP DGG CYY CM+RGML   G G QGLGS  ++ + WE    D+P+RECLWI+    D 
Sbjct: 1458 DPRDGGMCYYGCMSRGMLGGEGNGKQGLGSRHSQLSLWESHLGDSPTRECLWIVSPKTDL 1517

Query: 210  NS----TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            +S    +    +I   +  DINV C EN+VY+YDGLP FV+S   +HQS  LGV+CTE  
Sbjct: 1518 SSDNMLSGTQSVIQFTIHDDINVSCQENSVYVYDGLPQFVSS-STSHQSQLLGVYCTEST 1576

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y I +C D CP NR C N  C+C     G 
Sbjct: 1577 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYLIMTCND-CPGNRECRNGNCLCKAGFVGI 1634

Query: 326  DCQEEICPNECHEFLNHGTCD 346
             C  EICPN C      G CD
Sbjct: 1635 SCDIEICPNNCTSSKKQGICD 1655

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181027|gb|EFN68801.1| Multiple epidermal growth factor-like domains 8 [Camponotus floridanus]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 177/326 (54%), Positives = 214/326 (65%), Gaps = 16/326 (4%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY +C+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICDEC DWTTG +C
Sbjct: 1337 CYERCVNGYCSEAPDYKCECNLGWTGPDCRTNCGCYNHSTCMQGPGICDECQDWTTGRYC 1396

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C+AGSYGNAT   GCR+CDCN HG+  L VCD  TG C C+DNT+G  C+RC  GYYG
Sbjct: 1397 EECKAGSYGNATMPLGCRECDCNGHGDIELDVCDRQTGMCFCRDNTEGDKCQRCKRGYYG 1456

Query: 154  DPTDGGTCYYQCMARGMLTG--PGPQGLGSGLAERNAW-----EGKDTPSRECLWIIGQ- 205
            DP DGG CYY CM+RGML G     QGLGS  ++ + W     +  DTP+RECLWI+   
Sbjct: 1457 DPRDGGMCYYGCMSRGMLGGVENRKQGLGSRHSQSSLWRSYAGDSSDTPTRECLWIVSPE 1516

Query: 206  -SLDSNSTAPA--DIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCT 262
             +L S++T P    +I   +  DINV C EN+VY+YDGLP+FV+S GG HQS  LGV+CT
Sbjct: 1517 VNLSSDATIPTIQSVIQFTILEDINVSCQENSVYVYDGLPEFVSSTGG-HQSQLLGVYCT 1575

Query: 263  EDMHRGYEVLEAKSGVMTIHYKQGKP--SEGFNATYQIFSCPDKCPENRTCINNQCVCPP 320
            E       V EAKSG +T+HYKQ     +EGFNA+Y + +C + CP NR C N  C+C  
Sbjct: 1576 ESTDYPVTV-EAKSGFLTVHYKQLDEVFNEGFNASYIVMTC-NNCPGNRECRNGNCLCKS 1633

Query: 321  RRTGPDCQEEICPNECHEFLNHGTCD 346
               G DC  EICPN C      G CD
Sbjct: 1634 GYVGIDCDVEICPNNCTASKKQGVCD 1659

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483939|ref|XP_001604319.2| PREDICTED: multiple epidermal growth factor-like domains protein 8-like [Nasonia vitripennis]

 Score =  327 bits (838), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 169/321 (52%), Positives = 204/321 (63%), Gaps = 11/321 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY KC+ GYC   PDY C+C LGWTG DC  NC C NHSTC+ G GICDEC +WT G +C
Sbjct: 1339 CYEKCVNGYCSEAPDYKCECYLGWTGPDCRTNCGCYNHSTCIAGPGICDECQNWTEGRYC 1398

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
              C+AGSYGNATT  GC+KCDCN HG++ LG CD  TG C C DNT+G  CE C  GYYG
Sbjct: 1399 DECKAGSYGNATTSLGCQKCDCNEHGDAALGTCDRQTGICFCNDNTEGDRCEMCKKGYYG 1458

Query: 154  DPTDGGTCYYQCMARGMLTGP--GPQGLGSGLAERNAWEGK--DTPSRECLWII----GQ 205
            DP  GG CYY CM+RGML G   G QGLGS  ++ + WE     +P+RECLWI+    G 
Sbjct: 1459 DPRHGGMCYYGCMSRGMLEGEGNGKQGLGSRHSQLSLWESHLGGSPTRECLWIVSPKTGL 1518

Query: 206  SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
            S D+ + A    I   +  DINV C EN+VY+YDGLP FV++   +HQS  LGV+CTE  
Sbjct: 1519 SSDTMTPAVQSAIQFTIHDDINVSCQENSVYVYDGLPAFVSTT-TSHQSQLLGVYCTEST 1577

Query: 266  HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
                 V EAKSG +T+HYKQ    EGFNA+Y + +C + CP NR C    C+C     G 
Sbjct: 1578 DYPVTV-EAKSGFLTVHYKQLDEVEGFNASYVVMTC-NNCPANRECRGGNCLCKVGFVGI 1635

Query: 326  DCQEEICPNECHEFLNHGTCD 346
            +C  E+CP  C      G CD
Sbjct: 1636 NCDIELCPKNCSSARKQGICD 1656

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157104723|ref|XP_001648539.1| hypothetical protein AaeL_AAEL014347 [Aedes aegypti] gi|108869145|gb|EAT33370.1| AAEL014347-PA [Aedes aegypti]

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 163/316 (51%), Positives = 206/316 (65%), Gaps = 9/316 (2%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY  C++GYC G PDY CQC+LGWTG+DCS NC CNNHSTCV G+G CD+C +WT G +C
Sbjct: 1243 CYETCVHGYCSGGPDYRCQCDLGWTGIDCSQNCECNNHSTCVQGVGKCDKCMNWTEGQYC 1302

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C  GS+GNAT++ GC+ CDCN HGN  LG+CDS TGEC CQDNT+G  CE C   ++G
Sbjct: 1303 ERCSPGSFGNATSELGCQPCDCNGHGNEALGICDSQTGECYCQDNTEGLKCEMCNRNFFG 1362

Query: 154  DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTA 213
            DP  GG CYYQC  RG+LT  G +G+GS  + R+   G  T +RECLWII   +      
Sbjct: 1363 DPKGGGQCYYQCEPRGVLTNVGTEGIGSYQSHRSIRGG--TEARECLWIISPYVKHGGEL 1420

Query: 214  PADIILLRLQP-DINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL 272
               II   ++P D+NV C +NAVY+YDGLPD     G T Q   L VFC+ED  +   V 
Sbjct: 1421 KNAIIQFEIEPQDMNVTCGQNAVYVYDGLPDL---TGATQQKQLLAVFCSED--KSPWVT 1475

Query: 273  EAKSGVMTIHYKQGKPSEGFNATYQIFSCP-DKCPENRTCINNQCVCPPRRTGPDCQEEI 331
            EA+SG +TIHYKQG   +GF A Y + SC  + C     C  ++CVCP    GP C  +I
Sbjct: 1476 EARSGHLTIHYKQGGHGQGFKAIYNVMSCSINTCKRPYVCHADKCVCPKGFAGPRCSLKI 1535

Query: 332  CPNECHEFLNHGTCDL 347
            CP++C+     GTCD+
Sbjct: 1536 CPSDCNVDRKQGTCDI 1551

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046046|ref|XP_001850596.1| laminin subunit gamma-3 [Culex quinquefasciatus] gi|167868958|gb|EDS32341.1| laminin subunit gamma-3 [Culex quinquefasciatus]

 Score =  317 bits (812), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 162/315 (51%), Positives = 203/315 (64%), Gaps = 10/315 (3%)

Query: 34   CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
            CY  C++GYC G P+Y CQC+LGWTG+DCS NC CNNHSTC  G+G CD+C +WT G HC
Sbjct: 1229 CYETCVHGYCSGGPEYKCQCDLGWTGIDCSQNCACNNHSTCSQGVGKCDKCMNWTEGLHC 1288

Query: 94   QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
            + C  GS+GNATTQ GC+ CDCN HGN  LG+CDS TGEC CQDNT+G  CE C   +YG
Sbjct: 1289 ERCSPGSFGNATTQLGCQPCDCNGHGNEALGICDSQTGECYCQDNTEGLKCEVCNRNFYG 1348

Query: 154  DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTA 213
            DP  GG CYYQC  RG+LT  G QG+GS    ++A  G  T +RECLWII   +      
Sbjct: 1349 DPKAGGQCYYQCEPRGVLTHIGTQGIGSHQLHKSARGG--TEARECLWIISPYVKHGVEL 1406

Query: 214  PADIILLRLQP-DINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL 272
               II   ++P D+NV C +NA+Y+YDGLPD     G T Q   L VFC E+  +   + 
Sbjct: 1407 KNAIIQFEIEPQDMNVTCGQNAIYVYDGLPDL---TGVTLQKQLLAVFCNEN--KSPWIT 1461

Query: 273  EAKSGVMTIHYKQGKPSEGFNATYQIFSCP-DKCPENRTCINNQCVCPPRRTGPDCQEEI 331
            EA+SG +T+HY+QG   +GF A Y + SC  + C     C +N+CVCP   TGP C  +I
Sbjct: 1462 EARSGHLTVHYRQGH-DQGFKAIYSVMSCNINTCKRPYICSDNKCVCPKGFTGPRCSLKI 1520

Query: 332  CPNECHEFLNHGTCD 346
            CP +C+     G CD
Sbjct: 1521 CPLDCNVEQKQGVCD 1535

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
FB|FBgn0031981	2898	CG7466 [Drosophila melanogaste	0.801	0.104	0.478	3e-83
ZFIN|ZDB-GENE-090730-1	2774	megf8 "multiple EGF-like-domai	0.806	0.109	0.381	7.3e-61
UNIPROTKB|E1BPS6	2772	MEGF8 "Uncharacterized protein	0.732	0.099	0.383	7.7e-57
UNIPROTKB|F1RGK2	2789	MEGF8 "Uncharacterized protein	0.732	0.098	0.383	1e-56
UNIPROTKB|Q7Z7M0	2845	MEGF8 "Multiple epidermal grow	0.732	0.097	0.379	1.1e-56
UNIPROTKB|E2RM39	2787	MEGF8 "Uncharacterized protein	0.732	0.099	0.386	1.6e-56
RGD|621190	2788	Megf8 "multiple EGF-like-domai	0.732	0.098	0.383	2.7e-56
MGI|MGI:2446294	2789	Megf8 "multiple EGF-like-domai	0.732	0.098	0.379	9e-56
MGI|MGI:99909	3333	Lama3 "laminin, alpha 3" [Mus	0.397	0.045	0.410	1.9e-21
UNIPROTKB|F1MDD5	3242	Bt.12589 "Uncharacterized prot	0.395	0.045	0.395	1.4e-18

FB|FBgn0031981 CG7466 [Drosophila melanogaster (taxid:7227)]

 Score = 835 (299.0 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
 Identities = 153/320 (47%), Positives = 190/320 (59%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
             CY  C  G C GPPDY+C+C LGWTG DC ++C CNNHSTC   +G CD+C DW+ G+ C
Sbjct:  1232 CYELCQNGNCSGPPDYTCRCALGWTGADCGLSCGCNNHSTCNERLGKCDQCQDWSEGEKC 1291

Query:    94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
             + CR GSYGNAT   GC  C+CN HGN  LGVC+   GEC C+DNTQG NCE C PGYYG
Sbjct:  1292 ERCRQGSYGNATAPHGCLPCECNGHGNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYG 1351

Query:   154 DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTA 213
             DP  GG CYYQC +RG+LT  G   +GS  + R+ W G     +ECLWI+        T 
Sbjct:  1352 DPRGGGKCYYQCESRGILTNIGKSAIGSYQSYRSPW-GASLEVKECLWIL-----QPKTL 1405

Query:   214 PADIILLRLQ---PDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE 270
              A+  LL+L+     + + C+ENAVYIYD LPD     G T Q+  L V C    +    
Sbjct:  1406 QAEKSLLQLEFQWQSLAMDCDENAVYIYDSLPDLT---GATQQNQLLAVVCAP--YSSPR 1460

Query:   271 VLEAKSGVMTIHYKQGKPSE--GFNATYQIFSC-PDKCPENRTCINNQ-CVCPPRRTGPD 326
             ++EA+S  +T+HYKQG      GFNA Y + +C    C     C   Q CVCP    G  
Sbjct:  1461 IIEARSSHVTVHYKQGSERRHFGFNALYSVMNCVAGSCISPHICDAQQRCVCPAGYVGAS 1520

Query:   327 CQEEICPNECHEFLNHGTCD 346
             C+ EICP+ C+     G CD
Sbjct:  1521 CEIEICPSNCNAKRMQGFCD 1540

GO:0016020 "membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

ZFIN|ZDB-GENE-090730-1 megf8 "multiple EGF-like-domains 8" [Danio rerio (taxid:7955)]

 Score = 625 (225.1 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
 Identities = 129/338 (38%), Positives = 177/338 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWT---------GVDCSVNCLCNNHSTCVHGIGICDEC 84
             CYN+C  G C G P + C+C LGWT         GV+C V+C CN HSTC+   GICD+C
Sbjct:  1107 CYNECRQGRCSGSPLFECECSLGWTSDPATLVLSGVECDVDCGCNFHSTCITAPGICDQC 1166

Query:    85 H--DWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
                DWTTG HC++C+ GS+G+A  + +GC  C CN HG+ + G C + TG+C C  +TQG
Sbjct:  1167 QGLDWTTGPHCEHCKPGSFGSALARGDGCVPCQCNGHGDPLQGFCHNQTGQCYCTHHTQG 1226

Query:   142 KNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDTPS---- 196
              +CE CLPGYYGDP D GTC+ QC  R +L     P  L S L    A  G         
Sbjct:  1227 PHCESCLPGYYGDPRDNGTCFSQCQGRSVLLSSSVPLSLSSSLGWHGAVGGHGGVGGHGG 1286

Query:   197 -RECLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTH 252
                CLW++  S D     P      + L   PD +  C  + VY++DGLP F+++ G  H
Sbjct:  1287 LSHCLWVLSVSQDLAPCMPGQSCPPVALTWHPDSHTHCTNSYVYVFDGLPRFLSN-GVVH 1345

Query:   253 QSTTL-GVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS---EGFNATYQIFSCPDKCPEN 308
                 L G FC         V EA SGV++++++    S   +GFNA++ +  C +   + 
Sbjct:  1346 SHHNLIGAFCGTTRMEPITV-EATSGVVSVYFEANVTSGRAQGFNASFWVKRCGNGSTDE 1404

Query:   309 RTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
              T I+ +C     + G  C   +C  EC   L    CD
Sbjct:  1405 GTVISAEC-----QAGAQCINGLC--ECPHGLGGPQCD 1435

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0061371 "determination of heart left/right asymmetry" evidence=IMP

GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IMP

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:1900164 "nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry" evidence=IMP

GO:0042074 "cell migration involved in gastrulation" evidence=IMP

GO:0055113 "epiboly involved in gastrulation with mouth forming second" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BPS6 MEGF8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 583 (210.3 bits), Expect = 7.7e-57, Sum P(2) = 7.7e-57
 Identities = 118/308 (38%), Positives = 162/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
             C   C +G C GPPD++C C+LGWT                CS +C CN HS C   G G
Sbjct:  1101 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCHKRGPG 1160

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct:  1161 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1220

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1221 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPAGGGAARAGP 1280

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  +      AP  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1281 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1338

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1339 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1397

Query:   305 CPENRTCI 312
             CP  + C+
Sbjct:  1398 CPVPQECV 1405

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1RGK2 MEGF8 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 583 (210.3 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
 Identities = 118/308 (38%), Positives = 162/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
             C   C +G C GPPD++C C+LGWT                CS +C CN HS C   G G
Sbjct:  1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG 1177

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct:  1178 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPAGGGAARAGP 1297

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  +      AP  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1298 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1356 IQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414

Query:   305 CPENRTCI 312
             CP  + C+
Sbjct:  1415 CPVPQECV 1422

GO:0016021 "integral to membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q7Z7M0 MEGF8 "Multiple epidermal growth factor-like domains protein 8" [Homo sapiens (taxid:9606)]

 Score = 584 (210.6 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 117/308 (37%), Positives = 163/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
             C   C +G C GPPD++C C+LGWT                CS +C C+ HS C   G G
Sbjct:  1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPG 1177

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct:  1178 FCDECQDWTWGEHCERCRPGSFGNATGSRGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1297

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  + +    AP  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1298 GLSYCVWVVSATEELQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414

Query:   305 CPENRTCI 312
             CP  + C+
Sbjct:  1415 CPVPQECV 1422

GO:0016021 "integral to membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=NAS

GO:0005198 "structural molecule activity" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E2RM39 MEGF8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
 Identities = 119/308 (38%), Positives = 162/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
             C   C +G C GPPD++C C+LGWT                CS +C CN HS C   G G
Sbjct:  1117 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG 1176

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct:  1177 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1236

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1237 EGAHCQFCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1296

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  +      AP  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1297 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1354

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1355 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1413

Query:   305 CPENRTCI 312
             CP  + CI
Sbjct:  1414 CPVPQECI 1421

GO:0016021 "integral to membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

RGD|621190 Megf8 "multiple EGF-like-domains 8" [Rattus norvegicus (taxid:10116)]

 Score = 580 (209.2 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
 Identities = 118/308 (38%), Positives = 162/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
             C   C +G C GPPD++C C+LGWT                CS +C CN HS C   G G
Sbjct:  1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPG 1177

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD+++G C CQD+T
Sbjct:  1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGTARAGP 1297

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  +      AP  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1298 GLSYCVWVVSATEALQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414

Query:   305 CPENRTCI 312
             CP  + C+
Sbjct:  1415 CPVPQECV 1422

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0061371 "determination of heart left/right asymmetry" evidence=ISO

GO:0071907 "determination of digestive tract left/right asymmetry" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0060287 "epithelial cilium movement involved in determination of left/right asymmetry" evidence=ISO

MGI|MGI:2446294 Megf8 "multiple EGF-like-domains 8" [Mus musculus (taxid:10090)]

 Score = 575 (207.5 bits), Expect = 9.0e-56, Sum P(2) = 9.0e-56
 Identities = 117/308 (37%), Positives = 161/308 (52%)

Query:    34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
             C   C +G C GPPD++C C+LGWT                CS +C C+ HS C   G G
Sbjct:  1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPG 1177

Query:    80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
              CDEC DWT G+HC+ CR GS+GNAT   GCR C CN HG+   G CD++TG C CQD+T
Sbjct:  1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLTGLCFCQDHT 1237

Query:   140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
             +G +C+ C PGYYGDP  GG+C+ +C  R +LT      LGS    GL        +  P
Sbjct:  1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGAARAGP 1297

Query:   196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
                 C+W++  +       P  +   + L   PD + PC  + V  +DG P F+ +  G 
Sbjct:  1298 GLSYCVWVVSATEALQPCVPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355

Query:   252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
              QS  + +  FC +   R   V +A SG++ +H++  G  S GFNA+     C    P  
Sbjct:  1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414

Query:   305 CPENRTCI 312
             CP  + C+
Sbjct:  1415 CPVPQECV 1422

GO:0003674 "molecular_function" evidence=ND

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0060287 "epithelial cilium movement involved in determination of left/right asymmetry" evidence=IMP

GO:0061371 "determination of heart left/right asymmetry" evidence=ISO;IMP

GO:0071907 "determination of digestive tract left/right asymmetry" evidence=ISO;IMP

GO:1900164 "nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry" evidence=ISO

MGI|MGI:99909 Lama3 "laminin, alpha 3" [Mus musculus (taxid:10090)]

 Score = 275 (101.9 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 71/173 (41%), Positives = 83/173 (47%)

Query:    43 CKGPPDY---SCQ-CELG--WTG----VDCSVNCLCNNHST-CVHGIGICDECHDWTTGD 91
             C  PPDY   SCQ C  G  W      V   V C CN HS  C  G GIC  C   T G+
Sbjct:  1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCNGHSNRCQDGSGICINCQHNTAGE 1713

Query:    92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLP 149
             HC+ C+AG YGNA     CR C C  H NS    C  D     C C+    G  CERC P
Sbjct:  1714 HCERCQAGHYGNAI-HGSCRVCPC-PHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAP 1771

Query:   150 GYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKD-TPSREC 199
             GY+G+P   GG+C    C + G L GP     G  + +    E KD +P+ EC
Sbjct:  1772 GYFGNPQKFGGSCQPCNCNSNGQL-GPCDPLTGDCVNQ----EPKDGSPAEEC 1819

GO:0005102 "receptor binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005604 "basement membrane" evidence=IDA

GO:0005606 "laminin-1 complex" evidence=IEA

GO:0005608 "laminin-3 complex" evidence=ISO

GO:0005610 "laminin-5 complex" evidence=IDA

GO:0005913 "cell-cell adherens junction" evidence=ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0030056 "hemidesmosome" evidence=ISO

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0030334 "regulation of cell migration" evidence=IEA

GO:0031581 "hemidesmosome assembly" evidence=ISO

GO:0045995 "regulation of embryonic development" evidence=IEA

UNIPROTKB|F1MDD5 Bt.12589 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 256 (95.2 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 70/177 (39%), Positives = 85/177 (48%)

Query:    43 CKGPPDY---SCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGIGICDECHDWTT-- 89
             C  PPDY   SCQ C  G+     G+     V C CN HS  C  G GIC EC    T  
Sbjct:  1558 CACPPDYTGDSCQGCSPGYYRENKGLYTGWCVPCNCNGHSNRCQDGSGICIECSSGMTIR 1617

Query:    90 -GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE---CICQDNTQGKNCE 145
              G+HC+ C+ GSY N T    CR C C  H +S    C  +TGE   C C+    G  CE
Sbjct:  1618 GGEHCERCKEGSYWN-TIHGSCRVCPC-PHSDSFATGC-VVTGENVKCSCKPGYTGTRCE 1674

Query:   146 RCLPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKDT-PSREC 199
             RC PGY+G+P   GG+C    C + G L    P   G  + +    E KD+ P  EC
Sbjct:  1675 RCAPGYFGNPQKFGGSCQPCNCNSNGQLGSCDPLN-GDCINQ----EPKDSGPGEEC 1726

GO:0005610 "laminin-5 complex" evidence=IEA

GO:0045995 "regulation of embryonic development" evidence=IEA

GO:0030334 "regulation of cell migration" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005606 "laminin-1 complex" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	377
cd00055	50	cd00055, EGF_Lam, Laminin-type epidermal growth fa	1e-12
pfam00053	49	pfam00053, Laminin_EGF, Laminin EGF-like (Domains	7e-11
smart00180	46	smart00180, EGF_Lam, Laminin-type epidermal growth	1e-09

>gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
           CDCN HG S+ G CD  TG+C C+ NT G+ C+RC PGYYG P+ GG C 
Sbjct: 2   CDCNGHG-SLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPSQGGGCQ 50

Length = 50

>gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V)

 Score = 56.6 bits (137), Expect = 7e-11
 Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
           CDCN HG S+   CD  TG+C+C+    G++C+RC PGYYG P+D G
Sbjct: 1   CDCNPHG-SLSDTCDPETGQCLCKPGVTGRHCDRCKPGYYGLPSDPG 46

This family is like pfam00008 but has 8 conserved cysteines instead of six. Length = 49

>gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai

 Score = 53.1 bits (128), Expect = 1e-09
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
           CDC+  G S  G CD  TG+C C+ N  G+ C+RC PGYYGD   G
Sbjct: 1   CDCDPGG-SASGTCDPDTGQCECKPNVTGRRCDRCAPGYYGDGPPG 45

Length = 46

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	377
KOG0994|consensus	1758		99.76
KOG0994|consensus	1758		99.73
KOG1225|consensus	525		99.39
KOG1225|consensus	525		99.32
KOG1836|consensus	1705		99.3
KOG3512|consensus	592		99.11
KOG1219|consensus	4289		98.99
KOG1836|consensus	1705		98.86
KOG1226|consensus	783		98.7
KOG3512|consensus	592		98.65
KOG4289|consensus	2531		98.58
KOG1226|consensus	783		98.54
KOG4289|consensus	2531		98.47
KOG1219|consensus	4289		98.3
KOG1217|consensus	487		98.27
KOG4260|consensus	350		98.25
KOG4260|consensus	350		98.0
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	97.83
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.73
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	97.66
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	97.6
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	97.51
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	97.44
cd00041	113	CUB CUB domain; extracellular domain; present in p	97.43
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	97.34
KOG4586|consensus	156		97.27
PF00431	110	CUB: CUB domain CUB domain entry Spermadhesins fam	97.14
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.05
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.05
smart00051	63	DSL delta serrate ligand.	97.0
KOG1217|consensus	487		96.99
smart00042	102	CUB Domain first found in C1r, C1s, uEGF, and bone	96.8
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	96.7
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	96.7
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	96.51
smart00051	63	DSL delta serrate ligand.	96.18
KOG1214|consensus	1289		96.14
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.12
KOG1388|consensus	217		96.04
KOG3509|consensus	964		95.87
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	95.65
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	95.56
KOG1214|consensus	1289		95.48
smart00181	35	EGF Epidermal growth factor-like domain.	95.16
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.1
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	94.87
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	94.38
cd00053	36	EGF Epidermal growth factor domain, found in epide	94.35
smart00181	35	EGF Epidermal growth factor-like domain.	94.26
cd00053	36	EGF Epidermal growth factor domain, found in epide	92.98
PHA02887	126	EGF-like protein; Provisional	92.96
KOG1218|consensus	316		92.84
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	92.33
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	92.1
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	90.94
KOG3509|consensus	964		90.46
PHA02887	126	EGF-like protein; Provisional	88.69
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	88.48
PF12662	24	cEGF: Complement Clr-like EGF-like	87.98
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	87.27
KOG1218|consensus	316		85.89
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	85.11
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	82.71
PF04863	56	EGF_alliinase: Alliinase EGF-like domain; InterPro	82.25
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	80.24

>KOG0994|consensus

Probab=99.76  E-value=4.3e-18  Score=172.67  Aligned_cols=147  Identities=35%  Similarity=0.683  Sum_probs=113.2

Q ss_pred             CCeeeecCCCCccCCCCC------------CCCCCCCc-eeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCC--CCcc
Q psy9819          47 PDYSCQCELGWTGVDCSV------------NCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EGCR  111 (377)
Q Consensus        47 ~~~~C~C~~G~~G~~C~~------------~C~C~~~g-~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~--~~C~  111 (377)
                      .+++|.|.+|.+|..|.+            +|.|++|+ +|++.+|.|+.|...++|.+|+.|.+||+|+.--.  ..|.
T Consensus       828 ~tGQC~C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi~CqD~T~G~~CdrCl~GyyGdP~lg~g~~Cr  907 (1758)
T KOG0994|consen  828 ITGQCQCRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCDPITGACIDCQDSTTGHSCDRCLDGYYGDPRLGSGIGCR  907 (1758)
T ss_pred             cccceeeccccchhhccccCCCccCCCcCccccccCcccccCccccccccccccccccchhhhhccccCCcccCCCCCCC
Confidence            356888888888888874            57899998 89999999999999999999999999999997543  6899


Q ss_pred             CCCCCCCCCc---CcccccCCC----cceecCCCCccCCCccCCCCccCCCCCCCCCCC-CCCCCCC--CCCCCCCCCCC
Q psy9819         112 KCDCNSHGNS---VLGVCDSIT----GECICQDNTQGKNCERCLPGYYGDPTDGGTCYY-QCMARGM--LTGPGPQGLGS  181 (377)
Q Consensus       112 ~~~C~~~g~~---~~g~C~~~~----g~C~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~-~C~~~g~--~~~~~~~~~g~  181 (377)
                      +|+|..+...   ...+|...+    -.|+|.+||+|.+|+.|.++|+|+|.++++|.. +|+++..  -...|...+|.
T Consensus       908 PCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~CeC~~NiD~~d~~aCD~~TG~  987 (1758)
T KOG0994|consen  908 PCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEICADNHFGNPSEGGTCQKCECSNNIDLYDPGACDVATGA  987 (1758)
T ss_pred             CCCCCCCCccchhccccccccccccceeeecccCccccchhhhcccccCCcccCCccccccccCCcCccCCCccchhhch
Confidence            9999765422   112454322    389999999999999999999999999999987 8877652  23455555554


Q ss_pred             cccCCCCCccCC
Q psy9819         182 GLAERNAWEGKD  193 (377)
Q Consensus       182 ~~~c~~G~~G~~  193 (377)
                      +..|...-+|.+
T Consensus       988 CLkCL~hTeG~h  999 (1758)
T KOG0994|consen  988 CLKCLYHTEGDH  999 (1758)
T ss_pred             hhhhhhcccccc
Confidence            444444334443

>KOG0994|consensus

Probab=99.73  E-value=7.4e-17  Score=163.83  Aligned_cols=171  Identities=30%  Similarity=0.726  Sum_probs=135.0

Q ss_pred             eeEEEecCCCCCcccccc-------cceeeeEeeecCCCcCC------------------------C--C-CC-CeecC-
Q psy9819           2 SIIFRISGLTTAKDDALS-------RCTVLLLYIFNASLCYN------------------------K--C-IY-GYCKG-   45 (377)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~C~~------------------------~--C-~~-G~C~~-   45 (377)
                      .||||+|+|.....|||+       ||||||+.+.+...++.                        .  | .| ..|.. 
T Consensus       204 EVifrvl~P~~~iedPYs~~IQ~~LKITNLRvn~tklhtlgdnllD~r~E~~ekyyYAiy~~vVrGsCfCyGHAs~C~P~  283 (1758)
T KOG0994|consen  204 EVIFRVLDPAIDIEDPYSAKIQELLKITNLRVNFTKLHTLGDNLLDSREEIREKYYYAIYDLVVRGSCFCYGHASQCAPV  283 (1758)
T ss_pred             eEEEEecCCCCCCCCchhHHHHHHhhhhheeeeeEeeccccccccccccccccchhheeeeeeeecceeecCchhhcccC
Confidence            499999999999999999       99999999988887764                        1  2 23 33542 


Q ss_pred             --------CC-----CeeeecCCCCccCCCCC----------------------CCCCCCCc-eee-----------cCC
Q psy9819          46 --------PP-----DYSCQCELGWTGVDCSV----------------------NCLCNNHS-TCV-----------HGI   78 (377)
Q Consensus        46 --------~~-----~~~C~C~~G~~G~~C~~----------------------~C~C~~~g-~C~-----------~~~   78 (377)
                              ++     -+.|.|.....|.+|+.                      .|.|++|. +|+           ...
T Consensus       284 ~g~~s~~~~~ta~mVHG~C~C~HNT~G~nCE~C~~fYnDlPWrpAeG~~~neCrkC~CNgHa~sCHFD~aV~~ASG~vSG  363 (1758)
T KOG0994|consen  284 DGARSAKAPGTAHMVHGRCMCKHNTAGLNCEHCAPFYNDLPWRPAEGKTSNECRKCECNGHADTCHFDMAVYEASGNVSG  363 (1758)
T ss_pred             CCCCcccCCCccceecceeEeccCCCCCChHHhhHhhcCCCCCccCCCCcccccccCCCCCcccccccHHHHhhcCCccc
Confidence                    11     13799999999999993                      25899998 787           235


Q ss_pred             CcccCCCCCCCCCCCCCCCCCcccCCCC----CCCccCCCCCCCCCcCcccccC----CC----cceecCCCCccCCCcc
Q psy9819          79 GICDECHDWTTGDHCQYCRAGSYGNATT----QEGCRKCDCNSHGNSVLGVCDS----IT----GECICQDNTQGKNCER  146 (377)
Q Consensus        79 ~~C~~C~~g~~G~~C~~C~~g~~g~~c~----~~~C~~~~C~~~g~~~~g~C~~----~~----g~C~C~~g~~G~~C~~  146 (377)
                      |+|+.|.+++.|.+||.|+|.||-+.-.    +..|.+|.|...|+...|.|+.    .+    |.|.|+++..|.+|++
T Consensus       364 GVCDdCqHNT~G~~CE~CkP~fYRdprr~i~~p~vC~pC~CdP~GS~~~g~cds~~Dp~~GlvaGqC~CK~~V~G~RCd~  443 (1758)
T KOG0994|consen  364 GVCDDCQHNTEGQNCERCKPFFYRDPRRDISDPDVCKPCECDPAGSQDGGICDSFCDPSTGLVAGQCRCKEHVAGRRCDR  443 (1758)
T ss_pred             ccCccccccccccchhhcCcccccCCCCCCCCccccccccCCCCcCcCCCccccccCccccccccccccccCcCccccch
Confidence            8999999999999999999999987643    3789999999999888777743    33    7999999999999999


Q ss_pred             CCCCccCCCC-CCCCCCC-CCCCCCCCC
Q psy9819         147 CLPGYYGDPT-DGGTCYY-QCMARGMLT  172 (377)
Q Consensus       147 C~~G~~g~~~-~~~~C~~-~C~~~g~~~  172 (377)
                      |++||+|... +...|.. .|+..|+..
T Consensus       444 Ck~Gywgl~~~dp~GC~~C~CN~lGT~~  471 (1758)
T KOG0994|consen  444 CKDGYWGLTSADPYGCRPCDCNPLGTRN  471 (1758)
T ss_pred             hccCcccCccCCCCCccccccccccccC
Confidence            9999998753 2344554 666666444

>KOG1225|consensus

Probab=99.39  E-value=3e-12  Score=125.64  Aligned_cols=62  Identities=24%  Similarity=0.570  Sum_probs=52.0

Q ss_pred             CCCCCCcc-cccccCCCCCCCCCCeecCCcccCCCCCCCCCCCCCCCCCCccCC----CceEEeCCCCCCCC
Q psy9819         287 KPSEGFNA-TYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF----LNHGTCDLLLTGVH  353 (377)
Q Consensus       287 ~c~~GF~g-~~~~~~C~~~C~~~g~C~~g~C~C~~G~~G~~C~~~~C~~~C~~~----~~~c~C~~g~~G~~  353 (377)
                      .|.+||.| ++++..|+.+|+++|.|++++|+|.+||+|..|+++.    |+++    ++ |+|.+||.|.+
T Consensus       299 iC~~g~~G~dCs~~~cpadC~g~G~Ci~G~C~C~~Gy~G~~C~~~~----C~~~g~cv~g-C~C~~Gw~G~d  365 (525)
T KOG1225|consen  299 ICNPGYSGKDCSIRRCPADCSGHGKCIDGECLCDEGYTGELCIQRA----CSGGGQCVNG-CKCKKGWRGPD  365 (525)
T ss_pred             ecCCCccccccccccCCccCCCCCcccCCceEeCCCCcCCcccccc----cCCCceeccC-ceeccCccCCC
Confidence            34567888 7888889999999999999999999999999999873    5554    35 99999999988

>KOG1225|consensus

Probab=99.32  E-value=1.5e-11  Score=120.73  Aligned_cols=85  Identities=26%  Similarity=0.646  Sum_probs=73.2

Q ss_pred             CCCCCCcc-cccccCCCCCCCCCCeecCCcccCCCCCCCCCCCCCCCCCCccCC----CceEEeCCCCCCCCCCC-----
Q psy9819         287 KPSEGFNA-TYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF----LNHGTCDLLLTGVHITH-----  356 (377)
Q Consensus       287 ~c~~GF~g-~~~~~~C~~~C~~~g~C~~g~C~C~~G~~G~~C~~~~C~~~C~~~----~~~c~C~~g~~G~~C~~-----  356 (377)
                      .|.+||.| ++++..|+..|++|+.+++++|+|++||+|.+|++..||.+|+++    +++|.|.+||+|..|+.     
T Consensus       268 IC~~Gf~G~dC~e~~Cp~~cs~~g~~~~g~CiC~~g~~G~dCs~~~cpadC~g~G~Ci~G~C~C~~Gy~G~~C~~~~C~~  347 (525)
T KOG1225|consen  268 ICPPGFTGDDCDELVCPVDCSGGGVCVDGECICNPGYSGKDCSIRRCPADCSGHGKCIDGECLCDEGYTGELCIQRACSG  347 (525)
T ss_pred             eCCCCCcCCCCCcccCCcccCCCceecCCEeecCCCccccccccccCCccCCCCCcccCCceEeCCCCcCCcccccccCC
Confidence            45678998 777888988899999999999999999999999999999999998    59999999999999885     


Q ss_pred             CCeecccccCeeeecCCCee
Q psy9819         357 GRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       357 g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ++.|++   .  |.|..||-
T Consensus       348 ~g~cv~---g--C~C~~Gw~  362 (525)
T KOG1225|consen  348 GGQCVN---G--CKCKKGWR  362 (525)
T ss_pred             Cceecc---C--ceeccCcc
Confidence            444443   3  88888874

>KOG1836|consensus

Probab=99.30  E-value=5.9e-11  Score=130.39  Aligned_cols=116  Identities=33%  Similarity=0.801  Sum_probs=95.1

Q ss_pred             eeecCCCCccCCCCC-------------------CCCCCCC-ceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCC--
Q psy9819          50 SCQCELGWTGVDCSV-------------------NCLCNNH-STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--  107 (377)
Q Consensus        50 ~C~C~~G~~G~~C~~-------------------~C~C~~~-g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~--  107 (377)
                      .|.|++||+|..|+.                   +|+|++| .+|++.++.| .|.++..|.+|+.|.+||||..-..  
T Consensus       696 ~c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C-~C~~~t~G~~C~~C~~GfYg~~~~~~~  774 (1705)
T KOG1836|consen  696 QCTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQC-KCKHNTFGGQCAQCVDGFYGLPDLGTS  774 (1705)
T ss_pred             hccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCce-ecccCCCCCchhhhcCCCCCccccCCC
Confidence            599999999999983                   3578887 4899999999 6999999999999999999987654  


Q ss_pred             CCccCCCCCCCCCcCcccccCCCccee-cCCCCccCCCccCCCCccCCCCCCC----CCCC-CCCC
Q psy9819         108 EGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGG----TCYY-QCMA  167 (377)
Q Consensus       108 ~~C~~~~C~~~g~~~~g~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~~~~----~C~~-~C~~  167 (377)
                      .+|++|+|.+.+.... ++....++|. |+++|+|.+|+.|..||++++....    .|.. +|..
T Consensus       775 ~dC~~C~Cp~~~~~~~-~~~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~~c~c~~  839 (1705)
T KOG1836|consen  775 GDCQPCPCPNGGACGQ-TPEILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQSCQCNF  839 (1705)
T ss_pred             CCCccCCCCCChhhcC-cCcccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCccceecc
Confidence            4599999998864332 4444567998 9999999999999999999987544    5554 4444

>KOG3512|consensus

Probab=99.11  E-value=2.8e-10  Score=107.44  Aligned_cols=117  Identities=35%  Similarity=0.913  Sum_probs=96.6

Q ss_pred             CC-CeecCCC--CeeeecCCCCccCCCCC----------------------CCCCCCCce-ee-----------cCCCcc
Q psy9819          39 IY-GYCKGPP--DYSCQCELGWTGVDCSV----------------------NCLCNNHST-CV-----------HGIGIC   81 (377)
Q Consensus        39 ~~-G~C~~~~--~~~C~C~~G~~G~~C~~----------------------~C~C~~~g~-C~-----------~~~~~C   81 (377)
                      .| ..|+-..  .++|.|..+.+|++|..                      +|.|+.|+. |.           ...++|
T Consensus       282 gHAs~Cv~d~~~~ltCdC~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~SggvC  361 (592)
T KOG3512|consen  282 GHASRCVMDESSHLTCDCEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRRSGGVC  361 (592)
T ss_pred             CccceeeeccCCceEEecccCCCCCCcccccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCccccceE
Confidence            46 4587433  47999999999999993                      357888773 54           124689


Q ss_pred             cCCCCCCCCCCCCCCCCCcccCCCCC----CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCC
Q psy9819          82 DECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus        82 ~~C~~g~~G~~C~~C~~g~~g~~c~~----~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      .+|.++++|.+|+.|++||+-+...+    ..|..|.|+..|+... +|+..+|+|.|++|.+|..|..|.+||+....
T Consensus       362 lnCrHnTaGrhChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gk-tCNq~tGqCpCkeGvtG~tCnrCa~gyqqsrs  439 (592)
T KOG3512|consen  362 LNCRHNTAGRHCHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGK-TCNQTTGQCPCKEGVTGLTCNRCAPGYQQSRS  439 (592)
T ss_pred             eecccCCCCcccccccCccccCCCCCCchhhhhhhcCCcccccccc-cccccCCcccCCCCCcccccccccchhhcccC
Confidence            99999999999999999999887654    7899999998886544 89988999999999999999999999997643

>KOG1219|consensus

Probab=98.99  E-value=5.2e-10  Score=120.83  Aligned_cols=99  Identities=32%  Similarity=0.828  Sum_probs=82.2

Q ss_pred             CCcC-CCCCC-CeecCCC--CeeeecCCCCccCCCCC---CC---CCCCCceee--cCCCcccCCCCCCCCCCCCCCCCC
Q psy9819          32 SLCY-NKCIY-GYCKGPP--DYSCQCELGWTGVDCSV---NC---LCNNHSTCV--HGIGICDECHDWTTGDHCQYCRAG   99 (377)
Q Consensus        32 ~~C~-~~C~~-G~C~~~~--~~~C~C~~G~~G~~C~~---~C---~C~~~g~C~--~~~~~C~~C~~g~~G~~C~~C~~g   99 (377)
                      .-|. +|||| |+|+..+  .|+|.|++-|+|..|++   +|   +|..+|+|+  ...+.| +|+.+|+|.+||.  . 
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~C-nC~~gyTG~~Ce~--~- 3940 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLC-NCPNGYTGKRCEA--R- 3940 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeE-eCCCCccCceeec--c-
Confidence            4465 69999 8999643  79999999999999996   56   899999998  457899 9999999999975  1 


Q ss_pred             cccCCCCCCCccCCCCCCCCCcCcccccCCCc--ceecCCCCccCCCc
Q psy9819         100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCE  145 (377)
Q Consensus       100 ~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g--~C~C~~g~~G~~C~  145 (377)
                        |    .++|...+|.++|     .|....|  .|.|.+||.|+.|.
T Consensus      3941 --G----i~eCs~n~C~~gg-----~C~n~~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3941 --G----ISECSKNVCGTGG-----QCINIPGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred             --c----ccccccccccCCc-----eeeccCCceEeccChhHhcccCc
Confidence              1    3567777888877     8876555  99999999999987

>KOG1836|consensus

Probab=98.86  E-value=6.2e-08  Score=107.14  Aligned_cols=110  Identities=30%  Similarity=0.611  Sum_probs=89.7

Q ss_pred             cccCCCCCCCCCCCCCCCCCcccCCCCC---CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCC
Q psy9819          80 ICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus        80 ~C~~C~~g~~G~~C~~C~~g~~g~~c~~---~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      .| .|++||+|..||.|+++|+...-..   ..|.+|.|+++.    .+|++.+|.|.|.+...|..|++|.+||||++.
T Consensus       696 ~c-~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~----~~Cd~~tG~C~C~~~t~G~~C~~C~~GfYg~~~  770 (1705)
T KOG1836|consen  696 QC-TCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHS----NICDPRTGQCKCKHNTFGGQCAQCVDGFYGLPD  770 (1705)
T ss_pred             hc-cCCCCcccchhhhcchhhhcccccCCCCCcccccccCCcc----ccccCCCCceecccCCCCCchhhhcCCCCCccc
Confidence            48 7999999999999999998765432   456677777762    389999999999999999999999999999986


Q ss_pred             CCC--CCCC-CCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819         157 DGG--TCYY-QCMARGMLTGPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       157 ~~~--~C~~-~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      .+.  .|.. .|...+.+........+.++.|++||+|..|
T Consensus       771 ~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rC  811 (1705)
T KOG1836|consen  771 LGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRC  811 (1705)
T ss_pred             cCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCccccc
Confidence            432  2766 7877777776666666777789999999988

>KOG1226|consensus

Probab=98.70  E-value=6.1e-08  Score=97.43  Aligned_cols=46  Identities=30%  Similarity=0.769  Sum_probs=35.2

Q ss_pred             CCCCCeecCCcccCCCC-CCCCCCCC-CCCCCCccCCCceE-EeCCCCCC
Q psy9819         305 CPENRTCINNQCVCPPR-RTGPDCQE-EICPNECHEFLNHG-TCDLLLTG  351 (377)
Q Consensus       305 C~~~g~C~~g~C~C~~G-~~G~~C~~-~~C~~~C~~~~~~c-~C~~g~~G  351 (377)
                      |+++|+|.-|+|+|... |.|..||+ +.|++.|... ..| .|..--+|
T Consensus       596 CSGrG~C~Cg~C~C~~~~~sG~~CE~cptc~~~C~~~-~~CveC~~~~~g  644 (783)
T KOG1226|consen  596 CSGRGTCECGRCKCTDPPYSGEFCEKCPTCPDPCAEN-KSCVECQAFETG  644 (783)
T ss_pred             eCCCceeeCCceEcCCCCcCcchhhcCCCCCCccccc-ccchhhcccccc
Confidence            99999999999999877 99999997 4588888765 234 44444444

>KOG3512|consensus

Probab=98.65  E-value=5.9e-08  Score=92.03  Aligned_cols=127  Identities=28%  Similarity=0.640  Sum_probs=97.9

Q ss_pred             CCCCCCc-eee---cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC------CCccCCCCCCCCCc--CcccccCC----
Q psy9819          66 CLCNNHS-TCV---HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ------EGCRKCDCNSHGNS--VLGVCDSI----  129 (377)
Q Consensus        66 C~C~~~g-~C~---~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~------~~C~~~~C~~~g~~--~~g~C~~~----  129 (377)
                      |.|++|+ .|+   ..+.+| .|.++++|+.|+.|++-|+.+....      ..|..+.|+.++..  .+..+...    
T Consensus       278 CKCNgHAs~Cv~d~~~~ltC-dC~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~  356 (592)
T KOG3512|consen  278 CKCNGHASRCVMDESSHLTC-DCEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRR  356 (592)
T ss_pred             eeecCccceeeeccCCceEE-ecccCCCCCCcccccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCcc
Confidence            6788887 587   234689 7999999999999999998776543      67899999888762  22222222    


Q ss_pred             -Cccee-cCCCCccCCCccCCCCccCCCC----CCCCCCC-CCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819         130 -TGECI-CQDNTQGKNCERCLPGYYGDPT----DGGTCYY-QCMARGMLTGPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       130 -~g~C~-C~~g~~G~~C~~C~~G~~g~~~----~~~~C~~-~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                       .|+|. |.....|.+|..|++|||-+..    ....|.. .|.+.|.....|+..+|.+ .|.+|-+|..|
T Consensus       357 SggvClnCrHnTaGrhChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCNq~tGqC-pCkeGvtG~tC  427 (592)
T KOG3512|consen  357 SGGVCLNCRHNTAGRHCHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCNQTTGQC-PCKEGVTGLTC  427 (592)
T ss_pred             ccceEeecccCCCCcccccccCccccCCCCCCchhhhhhhcCCcccccccccccccCCcc-cCCCCCccccc
Confidence             24774 9999999999999999997654    2345655 7888888888888887766 58899999987

>KOG4289|consensus

Probab=98.58  E-value=3.3e-08  Score=103.82  Aligned_cols=112  Identities=29%  Similarity=0.681  Sum_probs=85.4

Q ss_pred             cceeeeEeeecCCCcC-CCCCC-CeecC----------------------C-CCeeeecCCCCccCCCCC---CC---CC
Q psy9819          20 RCTVLLLYIFNASLCY-NKCIY-GYCKG----------------------P-PDYSCQCELGWTGVDCSV---NC---LC   68 (377)
Q Consensus        20 ~~~~~~~~~~~~~~C~-~~C~~-G~C~~----------------------~-~~~~C~C~~G~~G~~C~~---~C---~C   68 (377)
                      +++.|++.-|.-++|. .||.| -.|+.                      | ++++|+||+||+|+.|+.   .|   +|
T Consensus      1168 ~~sll~VlpfdDniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCYs~pC 1247 (2531)
T KOG4289|consen 1168 AISLLRVLPFDDNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCYSGPC 1247 (2531)
T ss_pred             HhhheeeeeccCchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhhcCCC
Confidence            7778898889999998 58988 67873                      1 257899999999999996   35   89


Q ss_pred             CCCceee--cCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCC---CcceecCCC-CccC
Q psy9819          69 NNHSTCV--HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI---TGECICQDN-TQGK  142 (377)
Q Consensus        69 ~~~g~C~--~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~---~g~C~C~~g-~~G~  142 (377)
                      .++|+|.  .+.+.| .|.++|+|.+||.=.        ....|.+-.|.++|     +|...   ...|+|+.| |+++
T Consensus      1248 ~nng~C~srEggYtC-eCrpg~tGehCEvs~--------~agrCvpGvC~ngg-----tC~~~~nggf~c~Cp~ge~e~p 1313 (2531)
T KOG4289|consen 1248 GNNGRCRSREGGYTC-ECRPGFTGEHCEVSA--------RAGRCVPGVCKNGG-----TCVNLLNGGFCCHCPYGEFEDP 1313 (2531)
T ss_pred             CCCCceEEecCceeE-EecCCccccceeeec--------ccCccccceecCCC-----EEeecCCCceeccCCCcccCCC
Confidence            9999998  567899 799999999887300        01335555577777     77542   237889986 7889


Q ss_pred             CCc
Q psy9819         143 NCE  145 (377)
Q Consensus       143 ~C~  145 (377)
                      +|+
T Consensus      1314 rC~ 1316 (2531)
T KOG4289|consen 1314 RCE 1316 (2531)
T ss_pred             ceE
Confidence            998

>KOG1226|consensus

Probab=98.54  E-value=2.5e-07  Score=93.12  Aligned_cols=69  Identities=23%  Similarity=0.466  Sum_probs=51.2

Q ss_pred             cccccCCCCC----CCCCCeecCCcccCCCCCCCCCCCCCCCCCC--------ccCCC----ceEEeCCC-CCCCCCCCC
Q psy9819         295 TYQIFSCPDK----CPENRTCINNQCVCPPRRTGPDCQEEICPNE--------CHEFL----NHGTCDLL-LTGVHITHG  357 (377)
Q Consensus       295 ~~~~~~C~~~----C~~~g~C~~g~C~C~~G~~G~~C~~~~C~~~--------C~~~~----~~c~C~~g-~~G~~C~~g  357 (377)
                      +++...|+..    |.+||+|.-|+|+|.+||+|..|+-+.-.+.        |+.++    ++|.|.+. |.|..||+-
T Consensus       543 ECDnfsC~r~~g~lC~g~G~C~CG~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~Cg~C~C~~~~~sG~~CE~c  622 (783)
T KOG1226|consen  543 ECDNFSCERHKGVLCGGHGRCECGRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCECGRCKCTDPPYSGEFCEKC  622 (783)
T ss_pred             eccCcccccccCcccCCCCeEeCCcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceeeCCceEcCCCCcCcchhhcC
Confidence            4444555432    9999999999999999999999986543333        44432    77899777 999999976


Q ss_pred             Ceeccc
Q psy9819         358 RTLHYQ  363 (377)
Q Consensus       358 ~~~~~~  363 (377)
                      -||-+-
T Consensus       623 ptc~~~  628 (783)
T KOG1226|consen  623 PTCPDP  628 (783)
T ss_pred             CCCCCc
Confidence            666554

>KOG4289|consensus

Probab=98.47  E-value=9.7e-08  Score=100.44  Aligned_cols=78  Identities=26%  Similarity=0.500  Sum_probs=62.4

Q ss_pred             CCCCCCCCCcccc---cccCC-CCCCCCCCeec---CC-cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCC
Q psy9819         284 KQGKPSEGFNATY---QIFSC-PDKCPENRTCI---NN-QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHIT  355 (377)
Q Consensus       284 ~s~~c~~GF~g~~---~~~~C-~~~C~~~g~C~---~g-~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~  355 (377)
                      ..++|++||++++   .++.| ..+|.++|+|.   +| +|.|.+||+|++||+..         -...|.+|+    |.
T Consensus      1222 lrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~---------~agrCvpGv----C~ 1288 (2531)
T KOG4289|consen 1222 LRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSA---------RAGRCVPGV----CK 1288 (2531)
T ss_pred             eeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeec---------ccCccccce----ec
Confidence            4457889999944   45778 67799999993   33 89999999999999862         135677776    99


Q ss_pred             CCCeecc-cccCeeeecCCC
Q psy9819         356 HGRTLHY-QVDLIRCTCRQV  374 (377)
Q Consensus       356 ~g~~~~~-~~~~~~c~~~~~  374 (377)
                      +|+||++ .+++|.|.|+.+
T Consensus      1289 nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1289 NGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             CCCEEeecCCCceeccCCCc
Confidence            9999995 578999999986

>KOG1219|consensus

Probab=98.30  E-value=6.3e-07  Score=97.99  Aligned_cols=78  Identities=26%  Similarity=0.561  Sum_probs=66.8

Q ss_pred             cCC-CCCCCCCCeecCC-----cccCCCCCCCCCCCCCC--C-CCCccCC--------CceEEeCCCCCCCCCC------
Q psy9819         299 FSC-PDKCPENRTCINN-----QCVCPPRRTGPDCQEEI--C-PNECHEF--------LNHGTCDLLLTGVHIT------  355 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~g-----~C~C~~G~~G~~C~~~~--C-~~~C~~~--------~~~c~C~~g~~G~~C~------  355 (377)
                      +.| .++|+++|+|...     .|+|++-|+|.+||+.+  | +++|.+.        ...|.|+.||+|.+||      
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~Gi~e 3944 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEARGISE 3944 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeecccccc
Confidence            567 5679999999432     89999999999999865  5 4788775        3779999999999887      


Q ss_pred             -------CCCeecccccCeeeecCCCee
Q psy9819         356 -------HGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       356 -------~g~~~~~~~~~~~c~~~~~~~  376 (377)
                             +|+.|++..++|-|-|-++|+
T Consensus      3945 Cs~n~C~~gg~C~n~~gsf~CncT~g~~ 3972 (4289)
T KOG1219|consen 3945 CSKNVCGTGGQCINIPGSFHCNCTPGIL 3972 (4289)
T ss_pred             cccccccCCceeeccCCceEeccChhHh
Confidence                   799999999999999999987

>KOG1217|consensus

Probab=98.27  E-value=5.5e-05  Score=75.37  Aligned_cols=91  Identities=26%  Similarity=0.682  Sum_probs=55.2

Q ss_pred             CCeecCC-CCeeeecCCCCccCCCCCC--CCC-----CCCceeecC-----CCcccCCCCCCCCCCCCCCCCCcccCCCC
Q psy9819          40 YGYCKGP-PDYSCQCELGWTGVDCSVN--CLC-----NNHSTCVHG-----IGICDECHDWTTGDHCQYCRAGSYGNATT  106 (377)
Q Consensus        40 ~G~C~~~-~~~~C~C~~G~~G~~C~~~--C~C-----~~~g~C~~~-----~~~C~~C~~g~~G~~C~~C~~g~~g~~c~  106 (377)
                      ++.+... ..+.|.|++||.|..|+..  |.-     ..++.|...     .+.| .|..+|.+..|+...         
T Consensus       100 ~~~~~~~~~~~~c~c~~g~~~~~~~~~~~C~~~~~~~~~~~~c~~~~~~~~~~~c-~C~~g~~~~~~~~~~---------  169 (487)
T KOG1217|consen  100 CGECVDCVGSYECTCPPGYQGTPCEGECECVTGPGVCCIDGSCSNGPGSVGPFRC-SCTEGYEGEPCETDL---------  169 (487)
T ss_pred             CccccCCCCCceeeCCCccccCcCCcceeecCCCCCeeCchhhcCCCCCCCceee-eeCCCcccccccccc---------
Confidence            3555543 3789999999999999973  521     233444432     3455 455555555553210         


Q ss_pred             CCCcc--CCCCCCCCCcCcccccCCC--cceecCCCCccCCCcc
Q psy9819         107 QEGCR--KCDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCER  146 (377)
Q Consensus       107 ~~~C~--~~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~~  146 (377)
                       +.|.  ...|.+.+     .|....  ..|.|.++|.|..|+.
T Consensus       170 -~~C~~~~~~c~~~~-----~C~~~~~~~~C~c~~~~~~~~~~~  207 (487)
T KOG1217|consen  170 -DECIQYSSPCQNGG-----TCVNTGGSYLCSCPPGYTGSTCET  207 (487)
T ss_pred             -cccccCCCCcCCCc-----ccccCCCCeeEeCCCCccCCcCcC
Confidence             2444  22366655     665433  4799999999998873

>KOG4260|consensus

Probab=98.25  E-value=2.1e-06  Score=76.34  Aligned_cols=65  Identities=32%  Similarity=0.798  Sum_probs=46.2

Q ss_pred             eecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccC-----CCcceecCCCCccCCCccCC
Q psy9819          74 CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS-----ITGECICQDNTQGKNCERCL  148 (377)
Q Consensus        74 C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~-----~~g~C~C~~g~~G~~C~~C~  148 (377)
                      |+..--+|  |++|+.|+.|..|+-|..-           +|.++|     .|..     .+|.|.|.+||+|+.|..|.
T Consensus       124 CvdqLkvC--Cp~gtyGpdCl~Cpggser-----------~C~GnG-----~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg  185 (350)
T KOG4260|consen  124 CVDQLKVC--CPDGTYGPDCLQCPGGSER-----------PCFGNG-----SCHGDGSREGSGKCKCETGYTGPLCRYCG  185 (350)
T ss_pred             hhhhheec--cCCCCcCCccccCCCCCcC-----------CcCCCC-----cccCCCCCCCCCcccccCCCCCccccccc
Confidence            44333456  8899999999888754421           355554     3322     25799999999999999999


Q ss_pred             CCccCCCC
Q psy9819         149 PGYYGDPT  156 (377)
Q Consensus       149 ~G~~g~~~  156 (377)
                      ++|+-...
T Consensus       186 ~eyfes~R  193 (350)
T KOG4260|consen  186 IEYFESSR  193 (350)
T ss_pred             hHHHHhhc
Confidence            99987643

>KOG4260|consensus

Probab=98.00  E-value=7.4e-06  Score=72.89  Aligned_cols=120  Identities=27%  Similarity=0.601  Sum_probs=80.9

Q ss_pred             ecCCCCccCCCCCCC------CCCCCceee-----cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC--CCccCCCCCCC
Q psy9819          52 QCELGWTGVDCSVNC------LCNNHSTCV-----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EGCRKCDCNSH  118 (377)
Q Consensus        52 ~C~~G~~G~~C~~~C------~C~~~g~C~-----~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~--~~C~~~~C~~~  118 (377)
                      -||+|.+|++|.. |      +|.++|.|.     .++++| .|.+||+|..|..|.++|+-..-+.  ..|..|  +..
T Consensus       131 CCp~gtyGpdCl~-Cpggser~C~GnG~C~GdGsR~GsGkC-kC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~C--h~~  206 (350)
T KOG4260|consen  131 CCPDGTYGPDCLQ-CPGGSERPCFGNGSCHGDGSREGSGKC-KCETGYTGPLCRYCGIEYFESSRNEQHLVCTAC--HEG  206 (350)
T ss_pred             ccCCCCcCCcccc-CCCCCcCCcCCCCcccCCCCCCCCCcc-cccCCCCCccccccchHHHHhhcccccchhhhh--hhh
Confidence            3999999999984 5      699999998     457999 8999999999999999998765443  334332  110


Q ss_pred             CCcCcccccCCCcceecCCCCccCCCccCCCCccCCCCCCCCCCC--CCCCCCC---CCCCCCCCCCCcc-cCCCCCcc
Q psy9819         119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY--QCMARGM---LTGPGPQGLGSGL-AERNAWEG  191 (377)
Q Consensus       119 g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~--~C~~~g~---~~~~~~~~~g~~~-~c~~G~~G  191 (377)
                      -   .+.|.          |-.-..|..|..||..+.   ..|.+  +|...+.   -..+|.|..|+|. .+++||.+
T Consensus       207 C---~~~Cs----------g~~~k~C~kCkkGW~lde---~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  207 C---LGVCS----------GESSKGCSKCKKGWKLDE---EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             h---hcccC----------CCCCCChhhhcccceecc---cccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            0   01232          222345666777777652   24544  5554442   2247889999998 66788876

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=97.83  E-value=3.8e-05  Score=51.73  Aligned_cols=43  Identities=58%  Similarity=1.378  Sum_probs=34.9

Q ss_pred             CCCCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCC
Q psy9819         113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus       113 ~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      +.|+.+++.. ..|+..+|+|.|+++|+|.+|++|++||++.+.
T Consensus         2 C~C~~~g~~~-~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~~   44 (50)
T cd00055           2 CDCNGHGSLS-GQCDPGTGQCECKPNTTGRRCDRCAPGYYGLPS   44 (50)
T ss_pred             CcCcCCCCCC-ccccCCCCEEeCCCcCCCCCCCCCCCCCccCCC
Confidence            4566665433 368888899999999999999999999999864

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.73  E-value=2.8e-05  Score=46.89  Aligned_cols=24  Identities=46%  Similarity=1.146  Sum_probs=22.1

Q ss_pred             CCCCCCeec--CCcccCCCCCCCCCC
Q psy9819         304 KCPENRTCI--NNQCVCPPRRTGPDC  327 (377)
Q Consensus       304 ~C~~~g~C~--~g~C~C~~G~~G~~C  327 (377)
                      .|++||+|+  .++|+|++||+|.+|
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCCC
Confidence            599999998  689999999999987

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=97.66  E-value=5.2e-05  Score=51.08  Aligned_cols=38  Identities=47%  Similarity=1.072  Sum_probs=32.6

Q ss_pred             CCCCCCce----eecCCCcccCCCCCCCCCCCCCCCCCcccCC
Q psy9819          66 CLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNA  104 (377)
Q Consensus        66 C~C~~~g~----C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~  104 (377)
                      |.|+.+++    |+..+++| .|+++|+|.+|++|+++|++..
T Consensus         2 C~C~~~g~~~~~C~~~~G~C-~C~~~~~G~~C~~C~~g~~~~~   43 (50)
T cd00055           2 CDCNGHGSLSGQCDPGTGQC-ECKPNTTGRRCDRCAPGYYGLP   43 (50)
T ss_pred             CcCcCCCCCCccccCCCCEE-eCCCcCCCCCCCCCCCCCccCC
Confidence            45666554    88889999 7999999999999999999975

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=97.60  E-value=8.5e-05  Score=49.04  Aligned_cols=29  Identities=55%  Similarity=1.420  Sum_probs=27.4

Q ss_pred             cccCCCcceecCCCCccCCCccCCCCccC
Q psy9819         125 VCDSITGECICQDNTQGKNCERCLPGYYG  153 (377)
Q Consensus       125 ~C~~~~g~C~C~~g~~G~~C~~C~~G~~g  153 (377)
                      .|+..+|+|.|+++++|.+|++|++||++
T Consensus        12 ~C~~~~G~C~C~~~~~G~~C~~C~~g~~g   40 (46)
T smart00180       12 TCDPDTGQCECKPNVTGRRCDRCAPGYYG   40 (46)
T ss_pred             cccCCCCEEECCCCCCCCCCCcCCCCcCC
Confidence            78877899999999999999999999998

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=97.51  E-value=4.3e-05  Score=51.26  Aligned_cols=41  Identities=49%  Similarity=1.258  Sum_probs=31.3

Q ss_pred             CCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCC
Q psy9819         115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus       115 C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      |+.++... ..|+..+|+|.|+++|+|++|++|.++|++.+.
T Consensus         3 C~~~~~~~-~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~~   43 (49)
T PF00053_consen    3 CNPHGSSS-QTCDPSTGQCVCKPGTTGPRCDQCKPGYFGLPS   43 (49)
T ss_dssp             STTCCBCC-SSEEETCEEESBSTTEESTTS-EE-TTEECSTT
T ss_pred             CcCCCCCC-CcccCCCCEEeccccccCCcCcCCCCccccccC
Confidence            44444332 388888999999999999999999999999854

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=97.44  E-value=4.3e-05  Score=51.24  Aligned_cols=38  Identities=39%  Similarity=0.878  Sum_probs=30.7

Q ss_pred             CCCCCc----eeecCCCcccCCCCCCCCCCCCCCCCCcccCCC
Q psy9819          67 LCNNHS----TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT  105 (377)
Q Consensus        67 ~C~~~g----~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c  105 (377)
                      .|+.++    +|++.+++| .|+++|+|.+|+.|+++|++...
T Consensus         2 ~C~~~~~~~~~C~~~~G~C-~C~~~~~G~~C~~C~~g~~~~~~   43 (49)
T PF00053_consen    2 DCNPHGSSSQTCDPSTGQC-VCKPGTTGPRCDQCKPGYFGLPS   43 (49)
T ss_dssp             SSTTCCBCCSSEEETCEEE-SBSTTEESTTS-EE-TTEECSTT
T ss_pred             cCcCCCCCCCcccCCCCEE-eccccccCCcCcCCCCccccccC
Confidence            455555    799999999 69999999999999999999854

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

Probab=97.43  E-value=0.00057  Score=53.82  Aligned_cols=82  Identities=28%  Similarity=0.601  Sum_probs=63.4

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCc----CCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ..+|.|.|.+       +.+..|.|.|. .++++    |..|++.++||...         ....++.+|+..  . |..
T Consensus        25 ~~~C~w~i~~-------~~g~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~---------~~~~~~~~Cg~~--~-~~~   84 (113)
T cd00041          25 NLNCVWTIEA-------PPGYRIRLTFE-DFDLESSPNCSYDYLEIYDGPST---------SSPLLGRFCGST--L-PPP   84 (113)
T ss_pred             CCcEEEEEEc-------CCCCEEEEEEe-CcccccCCCCCCcEEEEEcCCCC---------ccccceeeECCC--C-CCC
Confidence            5679999999       55678999998 67766    99999999998752         134567888876  3 567


Q ss_pred             eecCCCeeEeccCCCCC--CCCCccccc
Q psy9819         272 LEAKSGVMTIHYKQGKP--SEGFNATYQ  297 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c--~~GF~g~~~  297 (377)
                      ..+..+.+.|.|.++..  ..||.+.+.
T Consensus        85 ~~s~~~~~~i~f~s~~~~~~~GF~~~y~  112 (113)
T cd00041          85 IISSGNSLTVRFRSDSSVTGRGFKATYS  112 (113)
T ss_pred             EEecCCEEEEEEEeCCCCCCCCEEEEEE
Confidence            88888899999988765  388887553

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=97.34  E-value=0.00022  Score=47.05  Aligned_cols=29  Identities=45%  Similarity=1.004  Sum_probs=27.1

Q ss_pred             eeecCCCcccCCCCCCCCCCCCCCCCCccc
Q psy9819          73 TCVHGIGICDECHDWTTGDHCQYCRAGSYG  102 (377)
Q Consensus        73 ~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g  102 (377)
                      .|+..+++| .|+++++|.+|++|++||+|
T Consensus        12 ~C~~~~G~C-~C~~~~~G~~C~~C~~g~~g   40 (46)
T smart00180       12 TCDPDTGQC-ECKPNVTGRRCDRCAPGYYG   40 (46)
T ss_pred             cccCCCCEE-ECCCCCCCCCCCcCCCCcCC
Confidence            688889999 79999999999999999999

>KOG4586|consensus

Probab=97.27  E-value=0.00023  Score=56.44  Aligned_cols=85  Identities=21%  Similarity=0.461  Sum_probs=66.1

Q ss_pred             CCCccccccccccCCCCCCCCceeEEeecCC----CCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCc
Q psy9819         195 PSRECLWIIGQSLDSNSTAPADIILLRLQPD----INVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE  270 (377)
Q Consensus       195 p~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~----~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~  270 (377)
                      |+++|+.+|..       .+-..+++.|+..    .+-+|+.|++.|.||.-.+         +++++.+|+..   .|.
T Consensus        63 p~r~cv~vi~~-------~p~~~ve~~Fde~y~IEps~EC~fD~iEvrDGpfGF---------SPlI~rfCG~~---nPp  123 (156)
T KOG4586|consen   63 PNRDCVRVIHS-------RPQHDVEVKFDEVYHIEPSYECPFDFIEVRDGPFGF---------SPLIARFCGDR---NPP  123 (156)
T ss_pred             CCcceEEeEec-------ccccceEEeeeeeEEecccccCCCCcccccCCCcCc---------cHHHHHHhccC---CCh
Confidence            36789888877       4444566666522    2347999999999988766         89999999987   456


Q ss_pred             ceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         271 VLEAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       271 ~c~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      .+.+....|++.|.++.-.  .||+++|.+
T Consensus       124 ~Irs~grFlWIkF~sD~ele~~gfsa~y~~  153 (156)
T KOG4586|consen  124 EIRSVGRFLWIKFRSDSELEYQGFSAEYAI  153 (156)
T ss_pred             hheecCcEEEEEEcccchhhhcccceeeec
Confidence            8999999999999999654  999998765

>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork

Probab=97.14  E-value=0.00027  Score=55.43  Aligned_cols=80  Identities=26%  Similarity=0.554  Sum_probs=59.6

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCc----CCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ..+|.|.|.+       +++..|.|+|. .++++    |..|++.|+||....         ...++.+|+..   .+..
T Consensus        24 ~~~C~w~i~~-------~~~~~I~l~f~-~~~~~~~~~c~~d~l~v~~g~~~~---------~~~~~~~cg~~---~~~~   83 (110)
T PF00431_consen   24 NSDCTWTITA-------PPGHRIRLTFL-SFDLESSDSCCQDYLEVYDGNDES---------SPLLGRFCGSS---PPPS   83 (110)
T ss_dssp             SEEEEEEEE--------STTEEEEEEEE-EEEB--TTTSTSSEEEEESSSSTT---------SEEEEEESSSS---CCEE
T ss_pred             CCcEeEEEEe-------cccceeeeccc-cccceeeeeecccceeEEeecccc---------ceeeeeccCCc---CCcc
Confidence            4679999999       66678999887 56666    899999999977622         45678888743   4567


Q ss_pred             eecCCCeeEeccCCCCCC--CCCccc
Q psy9819         272 LEAKSGVMTIHYKQGKPS--EGFNAT  295 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c~--~GF~g~  295 (377)
                      +.+.++.+.|.|.++.-.  .||.+.
T Consensus        84 i~s~~~~l~i~f~s~~~~~~~gF~~~  109 (110)
T PF00431_consen   84 IISSSNSLFIRFHSDSSNSSRGFKAT  109 (110)
T ss_dssp             EEESSSEEEEEEEESSSSTTSEEEEE
T ss_pred             EEECCCEEEEEEEECCCCCCccEEEE
Confidence            888999999999886543  777654

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.05  E-value=0.00036  Score=42.14  Aligned_cols=25  Identities=20%  Similarity=0.169  Sum_probs=23.6

Q ss_pred             CCCCCCeecccc-cCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQV-DLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~-~~~~c~~~~~~~~  377 (377)
                      .|.|+++|++.+ +.|+|+|+++|++
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCcc
Confidence            799999999999 9999999999974

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.05  E-value=0.00018  Score=43.45  Aligned_cols=26  Identities=38%  Similarity=0.907  Sum_probs=21.5

Q ss_pred             CCCCC-CeecCC--CCeeeecCCCCccCC
Q psy9819          36 NKCIY-GYCKGP--PDYSCQCELGWTGVD   61 (377)
Q Consensus        36 ~~C~~-G~C~~~--~~~~C~C~~G~~G~~   61 (377)
                      +||+| |+|+..  .+|.|+|++||+|+.
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            58988 899863  479999999999963

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00051 DSL delta serrate ligand

Probab=97.00  E-value=0.00061  Score=48.09  Aligned_cols=43  Identities=26%  Similarity=0.477  Sum_probs=34.5

Q ss_pred             eeeecCCCCccCCCCCCCCC----CCCceeecCCCcccCCCCCCCCCCC
Q psy9819          49 YSCQCELGWTGVDCSVNCLC----NNHSTCVHGIGICDECHDWTTGDHC   93 (377)
Q Consensus        49 ~~C~C~~G~~G~~C~~~C~C----~~~g~C~~~~~~C~~C~~g~~G~~C   93 (377)
                      +.=.|+++|+|..|+..|.+    .+|.+|+. .|.+ .|.+||+|..|
T Consensus        17 ~rv~C~~~~yG~~C~~~C~~~~d~~~~~~Cd~-~G~~-~C~~Gw~G~~C   63 (63)
T smart00051       17 IRVTCDENYYGEGCNKFCRPRDDFFGHYTCDE-NGNK-GCLEGWMGPYC   63 (63)
T ss_pred             EEeeCCCCCcCCccCCEeCcCccccCCccCCc-CCCE-ecCCCCcCCCC
Confidence            34579999999999988854    67789986 5888 68888888766

>KOG1217|consensus

Probab=96.99  E-value=0.0092  Score=59.35  Aligned_cols=97  Identities=31%  Similarity=0.767  Sum_probs=56.0

Q ss_pred             CCCC-CeecCCC-CeeeecCCCCccCCCCCCCCCCCCceeecCCCcccCCCCCCCC-----------------------C
Q psy9819          37 KCIY-GYCKGPP-DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG-----------------------D   91 (377)
Q Consensus        37 ~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~~C~C~~~g~C~~~~~~C~~C~~g~~G-----------------------~   91 (377)
                      +|++ ++|.+.. +|.|.|+++|.|..|+..   .+.++|... ..| .+..++.+                       .
T Consensus       178 ~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~---~~~~~c~~~-~~~-~~~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~  252 (487)
T KOG1217|consen  178 PCQNGGTCVNTGGSYLCSCPPGYTGSTCETT---GNGGTCVDS-VAC-SCPPGARGPECEVSIVECASGDGTCVNTVGSY  252 (487)
T ss_pred             CcCCCcccccCCCCeeEeCCCCccCCcCcCC---CCCceEecc-eec-cCCCCCCCCCcccccccccCCCCcccccCCce
Confidence            4766 6787654 588999999998888753   122233221 112 22222222                       2


Q ss_pred             CCCCCCCCcccCCC----CCCCccCCC-CCCCCCcCcccccCCC--cceecCCCCccCCC
Q psy9819          92 HCQYCRAGSYGNAT----TQEGCRKCD-CNSHGNSVLGVCDSIT--GECICQDNTQGKNC  144 (377)
Q Consensus        92 ~C~~C~~g~~g~~c----~~~~C~~~~-C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C  144 (377)
                      .| .|++||.+..+    ..+.|.... |.+++     +|....  ..|.|++||.|..|
T Consensus       253 ~C-~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~-----~C~~~~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  253 TC-RCPEGYTGDACVTCVDVDSCALIASCPNGG-----TCVNVPGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             ee-eCCCCccccccceeeeccccCCCCccCCCC-----eeecCCCcceeeCCCCCCCCCC
Confidence            33 24666666652    225555532 55544     776533  58889999999888

>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

Probab=96.80  E-value=0.0019  Score=50.02  Aligned_cols=81  Identities=30%  Similarity=0.578  Sum_probs=57.2

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ...|.|.|.+       +.+..+.|.|. .+++    .|..|++.++||....         ...++.+|+..  ..+..
T Consensus        15 ~~~C~w~i~~-------~~g~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~~---------~~~~~~~Cg~~--~~~~~   75 (102)
T smart00042       15 NLDCVWTIRA-------PPGYRIELQFT-DFDLESSDNCEYDYVEIYDGPSAS---------SPLLGRFCGSE--LPPPV   75 (102)
T ss_pred             CCcEEEEEEC-------CCCeEEEEEEE-EEeccCCCCeeEeEEEEEeCCCCC---------CceeEEEecCc--CCCCe
Confidence            4679999999       45567888886 4443    3778999999976411         34566888876  33445


Q ss_pred             eecCCCeeEeccCCCCCC--CCCccc
Q psy9819         272 LEAKSGVMTIHYKQGKPS--EGFNAT  295 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c~--~GF~g~  295 (377)
                      ..+..+.+.|.|.++...  .||.+.
T Consensus        76 ~~s~~n~~~i~f~s~~~~~~~GF~~~  101 (102)
T smart00042       76 ISSSSNSLTVTFVSDSSVQKRGFSAR  101 (102)
T ss_pred             EEcCCCEEEEEEEeCCCCCCCCeEEE
Confidence            667788899999887644  688754

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.70  E-value=0.0016  Score=39.25  Aligned_cols=25  Identities=44%  Similarity=1.023  Sum_probs=16.5

Q ss_pred             CCC-CCeecCCCCeeeecCCCCccCCC
Q psy9819          37 KCI-YGYCKGPPDYSCQCELGWTGVDC   62 (377)
Q Consensus        37 ~C~-~G~C~~~~~~~C~C~~G~~G~~C   62 (377)
                      .|. ||+|+.+ .++|+|++||+|++|
T Consensus         7 ~C~~~G~C~~~-~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSP-CGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCC-CCEEECCCCCcCCCC
Confidence            353 5777754 347777777777765

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=96.70  E-value=0.00077  Score=31.83  Aligned_cols=13  Identities=62%  Similarity=1.694  Sum_probs=9.9

Q ss_pred             eeecCCCCccCCC
Q psy9819          50 SCQCELGWTGVDC   62 (377)
Q Consensus        50 ~C~C~~G~~G~~C   62 (377)
                      +|+|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            4889999998876

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=96.51  E-value=0.00055  Score=32.32  Aligned_cols=12  Identities=67%  Similarity=1.788  Sum_probs=7.0

Q ss_pred             ccCCCCCCCCCC
Q psy9819         316 CVCPPRRTGPDC  327 (377)
Q Consensus       316 C~C~~G~~G~~C  327 (377)
                      |+|++||+|.+|
T Consensus         2 C~C~~G~~G~~C   13 (13)
T PF12661_consen    2 CQCPPGWTGPNC   13 (13)
T ss_dssp             EEE-TTEETTTT
T ss_pred             ccCcCCCcCCCC
Confidence            566666666655

>smart00051 DSL delta serrate ligand

Probab=96.18  E-value=0.0058  Score=43.13  Aligned_cols=42  Identities=31%  Similarity=0.626  Sum_probs=26.3

Q ss_pred             CCCCcccCCCCCCCccC-CCCCCCCCcCcccccCCCcceecCCCCccCCC
Q psy9819          96 CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNC  144 (377)
Q Consensus        96 C~~g~~g~~c~~~~C~~-~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C  144 (377)
                      |+++|+|..|+ ..|.+ ....++.     +|+. .|.++|.+||+|..|
T Consensus        21 C~~~~yG~~C~-~~C~~~~d~~~~~-----~Cd~-~G~~~C~~Gw~G~~C   63 (63)
T smart00051       21 CDENYYGEGCN-KFCRPRDDFFGHY-----TCDE-NGNKGCLEGWMGPYC   63 (63)
T ss_pred             CCCCCcCCccC-CEeCcCccccCCc-----cCCc-CCCEecCCCCcCCCC
Confidence            45555555554 22321 1123333     8876 699999999999886

>KOG1214|consensus

Probab=96.14  E-value=0.011  Score=60.66  Aligned_cols=89  Identities=25%  Similarity=0.674  Sum_probs=54.1

Q ss_pred             CC-CCCeecC-CCCeeeecCCCCcc----CCCCC--------CC-----CCC--CCceee---cCCCcccCCCCCCCCCC
Q psy9819          37 KC-IYGYCKG-PPDYSCQCELGWTG----VDCSV--------NC-----LCN--NHSTCV---HGIGICDECHDWTTGDH   92 (377)
Q Consensus        37 ~C-~~G~C~~-~~~~~C~C~~G~~G----~~C~~--------~C-----~C~--~~g~C~---~~~~~C~~C~~g~~G~~   92 (377)
                      .| .|..|++ +++|+|+|..||.-    .+|-.        +|     .|.  ++..|+   .+++.| .|.+||    
T Consensus       743 ~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C-~CLPGf----  817 (1289)
T KOG1214|consen  743 RCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSC-ACLPGF----  817 (1289)
T ss_pred             CCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEE-eecCCc----
Confidence            35 3577886 45999999999873    34442        11     222  233444   235667 455555    


Q ss_pred             CCCCCCCcccCCC---CCCCccCCCCCCCCCcCcccccCC--CcceecCCCCccCC
Q psy9819          93 CQYCRAGSYGNAT---TQEGCRKCDCNSHGNSVLGVCDSI--TGECICQDNTQGKN  143 (377)
Q Consensus        93 C~~C~~g~~g~~c---~~~~C~~~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~~  143 (377)
                              .|+.-   +.++|.+..|....     +|...  ...|.|.+||.|.-
T Consensus       818 --------sGDG~~c~dvDeC~psrChp~A-----~CyntpgsfsC~C~pGy~GDG  860 (1289)
T KOG1214|consen  818 --------SGDGHQCTDVDECSPSRCHPAA-----TCYNTPGSFSCRCQPGYYGDG  860 (1289)
T ss_pred             --------cCCccccccccccCccccCCCc-----eEecCCCcceeecccCccCCC
Confidence                    44432   22677777777665     77643  45999999999853

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.12  E-value=0.0082  Score=37.51  Aligned_cols=28  Identities=39%  Similarity=1.029  Sum_probs=22.4

Q ss_pred             CCCCC-CeecCC-CCeeeecCCCCc-cCCCC
Q psy9819          36 NKCIY-GYCKGP-PDYSCQCELGWT-GVDCS   63 (377)
Q Consensus        36 ~~C~~-G~C~~~-~~~~C~C~~G~~-G~~C~   63 (377)
                      .+|.+ |+|++. ++|+|.|++||. |..|+
T Consensus         9 ~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        9 NPCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             CCcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            47876 699864 478999999999 88774

>KOG1388|consensus

Probab=96.04  E-value=0.0036  Score=54.44  Aligned_cols=86  Identities=38%  Similarity=0.962  Sum_probs=64.6

Q ss_pred             CccCCCCCCCCCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCCCcceec-
Q psy9819          57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC-  135 (377)
Q Consensus        57 ~~G~~C~~~C~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C-  135 (377)
                      |.-..|- .|.|++|+.|.... +|-.|..+.+|.+|+.|..||+|+ .....|.++.|..+..    -|...+++|.| 
T Consensus        44 W~fl~cP-~~~cNGh~~c~t~~-v~~~~~N~~~g~~c~kc~~g~~Gd-tN~g~c~~~~~~g~~~----~~~~~~~~c~c~  116 (217)
T KOG1388|consen   44 WRFLFCP-LCQCNGHSDCNTQH-VCWRCENGTTGAHCEKCIVGFYGD-TNGGKCQPCDCNGGAS----ACVTLTGKCFCT  116 (217)
T ss_pred             hhhhcCh-HHHhcCCCCcccce-eeeeccCccccccCCceEEEEEec-CCCCccCHhhhcCCee----eeeccCCccccc
Confidence            4455554 46788888887432 343688899999999999999998 3447788888877653    56667899999 


Q ss_pred             CCCCccCCCccCCC
Q psy9819         136 QDNTQGKNCERCLP  149 (377)
Q Consensus       136 ~~g~~G~~C~~C~~  149 (377)
                      .-++.|..|++|..
T Consensus       117 ~kgvvgd~c~~~e~  130 (217)
T KOG1388|consen  117 TKGVVGDLCPKCEV  130 (217)
T ss_pred             cceEecccCccccc
Confidence            45899999987654

>KOG3509|consensus

Probab=95.87  E-value=0.017  Score=61.30  Aligned_cols=107  Identities=42%  Similarity=1.003  Sum_probs=76.2

Q ss_pred             CeeeecCCCCccCCCCC-------------------CCCCCCCc-eeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819          48 DYSCQCELGWTGVDCSV-------------------NCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ  107 (377)
Q Consensus        48 ~~~C~C~~G~~G~~C~~-------------------~C~C~~~g-~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~  107 (377)
                      .-+|.|++|+.|..|+.                   .|.|+.|+ .|....++|..|..++.|.+|+.|.+||+++.-..
T Consensus       717 ~~~C~c~~g~~G~~ce~c~e~~~ls~t~~~~~~~~~~c~~~~h~~~c~~~~~~nt~~q~~~~~~~~~~~~~g~~~da~~g  796 (964)
T KOG3509|consen  717 VEQCQCPKGLVGTSCEDCAEGYTLSTTGGLYPGLCEDCECNSHISQCEDDLGYNTDCQNNTEGDRCELCSPGTYGDARRG  796 (964)
T ss_pred             ccccccCccccCcccccccccccccccCCcCcccCcccccCCCcccccccccccccccccCccceeeecCCCccccCccC
Confidence            34899999999988883                   24577776 68888889989999999999999999999987543


Q ss_pred             --CCccC-------CCCCCCCCcCcccccCCCcce-ecCCCCccCCCccCCCCccCCCCC
Q psy9819         108 --EGCRK-------CDCNSHGNSVLGVCDSITGEC-ICQDNTQGKNCERCLPGYYGDPTD  157 (377)
Q Consensus       108 --~~C~~-------~~C~~~g~~~~g~C~~~~g~C-~C~~g~~G~~C~~C~~G~~g~~~~  157 (377)
                        ..+.+       ..+.++..  . .+......| .|+++++|..|+.+..+|++...+
T Consensus       797 ~~~D~~p~~~l~~~~~~~~r~~--l-~~~~~~~~~~~~p~~~~g~~~~~~~~~~~~~atd  853 (964)
T KOG3509|consen  797 TPEDCRPATALTIQCSCNNRSP--L-SCDGFGPGCLLCPHNTEGTTCERVKAGYYGFATD  853 (964)
T ss_pred             CcccCCccchhhhhhhhcccCc--c-ccccCCCCcccCCCCccccchhhhccccccccCc
Confidence              22222       01222111  0 111112244 599999999999999999988654

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=95.65  E-value=0.011  Score=38.00  Aligned_cols=25  Identities=16%  Similarity=0.214  Sum_probs=23.1

Q ss_pred             CCCCCCCeecccccCeeeecCCCee
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ..|....+|+|.+++|+|.|++||.
T Consensus        10 ~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen   10 HNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             CcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            5788889999999999999999996

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=95.56  E-value=0.014  Score=36.34  Aligned_cols=31  Identities=42%  Similarity=1.124  Sum_probs=23.2

Q ss_pred             ccCCC--CCCCCCCeecCC----cccCCCCCC-CCCCC
Q psy9819         298 IFSCP--DKCPENRTCINN----QCVCPPRRT-GPDCQ  328 (377)
Q Consensus       298 ~~~C~--~~C~~~g~C~~g----~C~C~~G~~-G~~C~  328 (377)
                      +++|.  .+|.++++|++.    +|.|++||+ |..|+
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            34564  468888999644    699999998 88875

>KOG1214|consensus

Probab=95.48  E-value=0.014  Score=60.00  Aligned_cols=92  Identities=21%  Similarity=0.356  Sum_probs=61.5

Q ss_pred             CCCCCCCccc----ccccCC---CCCCCCCCeecCC----cccCCCCCC--C--CCCCCCC---CCCCccCC--------
Q psy9819         286 GKPSEGFNAT----YQIFSC---PDKCPENRTCINN----QCVCPPRRT--G--PDCQEEI---CPNECHEF--------  339 (377)
Q Consensus       286 ~~c~~GF~g~----~~~~~C---~~~C~~~g~C~~g----~C~C~~G~~--G--~~C~~~~---C~~~C~~~--------  339 (377)
                      +.|..||.+.    +++++|   ...|..+..|++.    +|.|..||.  +  ..|-...   =++.|...        
T Consensus       718 cecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g  797 (1289)
T KOG1214|consen  718 CECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAG  797 (1289)
T ss_pred             EEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCC
Confidence            3445566651    233445   5669999999654    788877773  3  3553211   12333322        


Q ss_pred             ----------CceEEeCCCCCCC-------------CCCCCCeecccccCeeeecCCCeeC
Q psy9819         340 ----------LNHGTCDLLLTGV-------------HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       340 ----------~~~c~C~~g~~G~-------------~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                                .+.|.|.+||.|.             .|-.-++|.+..++|.|+|.+||.+
T Consensus       798 ~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~G  858 (1289)
T KOG1214|consen  798 QARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYYG  858 (1289)
T ss_pred             ceEEEecCCceEEEeecCCccCCccccccccccCccccCCCceEecCCCcceeecccCccC
Confidence                      3789999999875             3557889999999999999999963

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.16  E-value=0.026  Score=34.34  Aligned_cols=28  Identities=36%  Similarity=0.961  Sum_probs=21.6

Q ss_pred             CCCCCCeecCC-CCeeeecCCCCcc-CCCC
Q psy9819          36 NKCIYGYCKGP-PDYSCQCELGWTG-VDCS   63 (377)
Q Consensus        36 ~~C~~G~C~~~-~~~~C~C~~G~~G-~~C~   63 (377)
                      .+|.++.|++. ++|+|.|++||.| ..|+
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~g~~~C~   35 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYTGDKRCE   35 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCccCCccC
Confidence            36766688764 4889999999999 6663

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.10  E-value=0.033  Score=34.24  Aligned_cols=28  Identities=39%  Similarity=1.011  Sum_probs=21.6

Q ss_pred             CCCCC-CeecCC-CCeeeecCCCCccCCCC
Q psy9819          36 NKCIY-GYCKGP-PDYSCQCELGWTGVDCS   63 (377)
Q Consensus        36 ~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~   63 (377)
                      .+|.+ +.|.+. +.|+|.|++||.|..|+
T Consensus         9 ~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           9 NPCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             CCcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            36875 789764 47899999999998774

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=94.87  E-value=0.03  Score=34.38  Aligned_cols=30  Identities=40%  Similarity=1.128  Sum_probs=22.1

Q ss_pred             cCCC--CCCCCCCeecCC----cccCCCCCCCCCCC
Q psy9819         299 FSCP--DKCPENRTCINN----QCVCPPRRTGPDCQ  328 (377)
Q Consensus       299 ~~C~--~~C~~~g~C~~g----~C~C~~G~~G~~C~  328 (377)
                      ++|.  .+|.+++.|++.    .|.|++||.|..|+
T Consensus         3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             ccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            4453  368888899544    69999999998774

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=94.38  E-value=0.031  Score=34.62  Aligned_cols=22  Identities=23%  Similarity=0.451  Sum_probs=18.9

Q ss_pred             CCCCCeecccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      |+|  .|++..++|+|.|++||.+
T Consensus         8 C~h--~C~~~~g~~~C~C~~Gy~L   29 (36)
T PF14670_consen    8 CSH--ICVNTPGSYRCSCPPGYKL   29 (36)
T ss_dssp             SSS--EEEEETTSEEEE-STTEEE
T ss_pred             cCC--CCccCCCceEeECCCCCEE
Confidence            677  9999999999999999974

...

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=94.35  E-value=0.057  Score=32.53  Aligned_cols=27  Identities=41%  Similarity=0.994  Sum_probs=21.5

Q ss_pred             CCCCC-CeecCC-CCeeeecCCCCccC-CC
Q psy9819          36 NKCIY-GYCKGP-PDYSCQCELGWTGV-DC   62 (377)
Q Consensus        36 ~~C~~-G~C~~~-~~~~C~C~~G~~G~-~C   62 (377)
                      .+|.+ +.|+.. +.|+|.|++||.|. .|
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCcccCCc
Confidence            56765 889864 37899999999998 55

>smart00181 EGF Epidermal growth factor-like domain

Probab=94.26  E-value=0.05  Score=33.07  Aligned_cols=25  Identities=20%  Similarity=0.250  Sum_probs=20.8

Q ss_pred             CCCCCCCeecccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ..|.++ +|++..++|+|+|+.+|.+
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCcc
Confidence            468888 8998889999999998863

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=92.98  E-value=0.098  Score=31.45  Aligned_cols=26  Identities=23%  Similarity=0.287  Sum_probs=22.7

Q ss_pred             CCCCCCCeecccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ..|.+++.|++..+.|+|+|+.+|..
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g   31 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTG   31 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCcc
Confidence            46888899999999999999999963

>PHA02887 EGF-like protein; Provisional

Probab=92.96  E-value=0.079  Score=41.47  Aligned_cols=28  Identities=36%  Similarity=0.860  Sum_probs=22.9

Q ss_pred             CCCCCeecCC---CCeeeecCCCCccCCCCC
Q psy9819          37 KCIYGYCKGP---PDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~~G~C~~~---~~~~C~C~~G~~G~~C~~   64 (377)
                      -|.||+|.-.   ....|.|++||+|..|+.
T Consensus        93 YCiHG~C~yI~dL~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887         93 FCINGECMNIIDLDEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             EeeCCEEEccccCCCceeECCCCcccCCCCc
Confidence            3789999742   367999999999999984

>KOG1218|consensus

Probab=92.84  E-value=0.38  Score=45.32  Aligned_cols=82  Identities=29%  Similarity=0.669  Sum_probs=59.1

Q ss_pred             eec-CCCCccCCCCCCCCCCCC---ceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccc
Q psy9819          51 CQC-ELGWTGVDCSVNCLCNNH---STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC  126 (377)
Q Consensus        51 C~C-~~G~~G~~C~~~C~C~~~---g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C  126 (377)
                      ..| ..+|.|..|..+++|..+   -+|......| .+..++.+..|..  ++++|..|..      .|.+..     .+
T Consensus        92 ~~~~~~~~~g~~C~~~~~~~~~c~~~~C~~~~~~c-~~~~~~~~~~C~~--~~~~g~~C~~------~c~~~~-----~~  157 (316)
T KOG1218|consen   92 GYCHLNGYEGPQCESPCPCGDGCAEKTCANPRREC-RCGGGYIGEQCGE--ENLVGLKCQR------DCQCTG-----GC  157 (316)
T ss_pred             CcccCCCCCcccccCCCCcCCcccccccCCCccce-ecCCcCccccccc--cCCCCCCccC------CCCCcc-----cc
Confidence            344 789999999998877655   5666443357 6888888888865  6888888773      222211     45


Q ss_pred             cCCCcceecCCCCccCCCcc
Q psy9819         127 DSITGECICQDNTQGKNCER  146 (377)
Q Consensus       127 ~~~~g~C~C~~g~~G~~C~~  146 (377)
                      ....+.|.|.+||.|.++..
T Consensus       158 ~~~~~~c~c~~g~~g~~~~~  177 (316)
T KOG1218|consen  158 DCKNGICTCQPGFVGVFCVE  177 (316)
T ss_pred             CCCCCceeccCCcccccccc
Confidence            55578999999999999984

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=92.33  E-value=0.027  Score=39.71  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=21.5

Q ss_pred             CeeeecCCCCccCCCCCCCC----CCCCceeecCCCcccCCCCCCCCCCC
Q psy9819          48 DYSCQCELGWTGVDCSVNCL----CNNHSTCVHGIGICDECHDWTTGDHC   93 (377)
Q Consensus        48 ~~~C~C~~G~~G~~C~~~C~----C~~~g~C~~~~~~C~~C~~g~~G~~C   93 (377)
                      .++-.|.+.|+|..|++.|.    -.+|-+|+. .|.= .|.+||+|+.|
T Consensus        16 ~~rv~C~~nyyG~~C~~~C~~~~d~~ghy~Cd~-~G~~-~C~~Gw~G~~C   63 (63)
T PF01414_consen   16 RIRVVCDENYYGPNCSKFCKPRDDSFGHYTCDS-NGNK-VCLPGWTGPNC   63 (63)
T ss_dssp             -------TTEETTTT-EE---EEETTEEEEE-S-S--E-EE-TTEESTTS
T ss_pred             EEEEECCCCCCCccccCCcCCCcCCcCCcccCC-CCCC-CCCCCCcCCCC
Confidence            45778999999999998762    234557874 4554 46777777765

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=92.10  E-value=0.11  Score=41.47  Aligned_cols=37  Identities=32%  Similarity=0.731  Sum_probs=28.3

Q ss_pred             eecCCCcCC----CCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819          28 IFNASLCYN----KCIYGYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        28 ~~~~~~C~~----~C~~G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      .-....|+.    -|.||+|.-   ...+.|.|+.||+|.+|+.
T Consensus        39 ~~~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         39 IPAIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             CcccccCChhhCCEeECCEEEeeccCCCceeECCCCcccccccc
Confidence            344566764    488999973   3477999999999999984

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=90.94  E-value=0.19  Score=31.05  Aligned_cols=25  Identities=20%  Similarity=0.191  Sum_probs=19.2

Q ss_pred             CCCCCCeecccccCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .|..-++|++..++|+|+|++||.+
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCcEeecCCCCEEeECCCCCcc
Confidence            4667789999999999999999974

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG3509|consensus

Probab=90.46  E-value=0.81  Score=49.08  Aligned_cols=78  Identities=36%  Similarity=0.777  Sum_probs=60.6

Q ss_pred             ecCCCcccCCCCCCCCCCCCCCCCCcccCCC---CCCCccCCCCCCCCCcCcccccCCCccee-cCCCCccCCCccCCCC
Q psy9819          75 VHGIGICDECHDWTTGDHCQYCRAGSYGNAT---TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPG  150 (377)
Q Consensus        75 ~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c---~~~~C~~~~C~~~g~~~~g~C~~~~g~C~-C~~g~~G~~C~~C~~G  150 (377)
                      ....-+| +|+.++.|.+|+.|.++|.-...   ....+..+.|..|..    .|....+.|. |...+.|.+|+.|.+|
T Consensus       714 ~~~~~~C-~c~~g~~G~~ce~c~e~~~ls~t~~~~~~~~~~c~~~~h~~----~c~~~~~~nt~~q~~~~~~~~~~~~~g  788 (964)
T KOG3509|consen  714 AAEVEQC-QCPKGLVGTSCEDCAEGYTLSTTGGLYPGLCEDCECNSHIS----QCEDDLGYNTDCQNNTEGDRCELCSPG  788 (964)
T ss_pred             hhhcccc-ccCccccCcccccccccccccccCCcCcccCcccccCCCcc----cccccccccccccccCccceeeecCCC
Confidence            3456689 79999999999999999865542   224555667776663    6766667775 8899999999999999


Q ss_pred             ccCCCCC
Q psy9819         151 YYGDPTD  157 (377)
Q Consensus       151 ~~g~~~~  157 (377)
                      ++++..-
T Consensus       789 ~~~da~~  795 (964)
T KOG3509|consen  789 TYGDARR  795 (964)
T ss_pred             ccccCcc
Confidence            9998764

>PHA02887 EGF-like protein; Provisional

Probab=88.69  E-value=0.3  Score=38.27  Aligned_cols=25  Identities=36%  Similarity=0.841  Sum_probs=19.7

Q ss_pred             CCCCCeec--C----CcccCCCCCCCCCCCCC
Q psy9819         305 CPENRTCI--N----NQCVCPPRRTGPDCQEE  330 (377)
Q Consensus       305 C~~~g~C~--~----g~C~C~~G~~G~~C~~~  330 (377)
                      |. ||+|.  .    -.|.|+.||+|.+|+..
T Consensus        94 Ci-HG~C~yI~dL~epsCrC~~GYtG~RCE~v  124 (126)
T PHA02887         94 CI-NGECMNIIDLDEKFCICNKGYTGIRCDEV  124 (126)
T ss_pred             ee-CCEEEccccCCCceeECCCCcccCCCCcc
Confidence            77 67992  1    26999999999999863

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=88.48  E-value=0.21  Score=30.86  Aligned_cols=24  Identities=29%  Similarity=0.854  Sum_probs=17.2

Q ss_pred             CC-CCCeecCC-CCeeeecCCCCccC
Q psy9819          37 KC-IYGYCKGP-PDYSCQCELGWTGV   60 (377)
Q Consensus        37 ~C-~~G~C~~~-~~~~C~C~~G~~G~   60 (377)
                      .| .|.+|++. ++|+|+|++||.|+
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred             CCCCCcEeecCCCCEEeECCCCCccC
Confidence            35 46888864 38999999999985

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=87.98  E-value=0.33  Score=27.06  Aligned_cols=11  Identities=27%  Similarity=0.706  Sum_probs=9.4

Q ss_pred             CeeeecCCCee
Q psy9819         366 LIRCTCRQVYL  376 (377)
Q Consensus       366 ~~~c~~~~~~~  376 (377)
                      +|+|+|++||.
T Consensus         1 sy~C~C~~Gy~   11 (24)
T PF12662_consen    1 SYTCSCPPGYQ   11 (24)
T ss_pred             CEEeeCCCCCc
Confidence            58899999986

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=87.27  E-value=0.21  Score=31.95  Aligned_cols=26  Identities=50%  Similarity=1.205  Sum_probs=19.7

Q ss_pred             ccCCC---CCCCCCCeecCC----cccCCCCCC
Q psy9819         298 IFSCP---DKCPENRTCINN----QCVCPPRRT  323 (377)
Q Consensus       298 ~~~C~---~~C~~~g~C~~g----~C~C~~G~~  323 (377)
                      +++|.   ..|..+++|++.    +|.|++||.
T Consensus         2 idEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             ccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            56672   358889999654    799999997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1218|consensus

Probab=85.89  E-value=8.6  Score=35.99  Aligned_cols=126  Identities=21%  Similarity=0.477  Sum_probs=61.5

Q ss_pred             CeeeecCCCCccCCCCCCCCCCCC-ceeecCCCcccCCCCCCCCCCCCCC-CCCcccCCCCCCCccCCCCCCCCCcCccc
Q psy9819          48 DYSCQCELGWTGVDCSVNCLCNNH-STCVHGIGICDECHDWTTGDHCQYC-RAGSYGNATTQEGCRKCDCNSHGNSVLGV  125 (377)
Q Consensus        48 ~~~C~C~~G~~G~~C~~~C~C~~~-g~C~~~~~~C~~C~~g~~G~~C~~C-~~g~~g~~c~~~~C~~~~C~~~g~~~~g~  125 (377)
                      ..+|.+..+|.|..|.+++..... +.|... ..| .....+..... .| ..+|.|..|..    .++|... ... .+
T Consensus        48 ~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~-~~c-~~~~~~~~~~~-~~~~~~~~g~~C~~----~~~~~~~-c~~-~~  118 (316)
T KOG1218|consen   48 SGECGLGYGFVGSVCRIECVCGNAGGGCSQP-CRC-KNGGTCVSSTG-YCHLNGYEGPQCES----PCPCGDG-CAE-KT  118 (316)
T ss_pred             ceeEecccccCCCccccccccCCCCCcccCc-ccc-CCCCcccCCCC-cccCCCCCcccccC----CCCcCCc-ccc-cc
Confidence            568899999999988875533222 222211 111 11111111111 12 34455544442    2222211 000 15


Q ss_pred             ccCCCcceecCCCCccCCCccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819         126 CDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       126 C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      |......|.+..+|.+..|..  ++++|.     .|...|.+..    .+.-..+.+ .+.+||.|..+
T Consensus       119 C~~~~~~c~~~~~~~~~~C~~--~~~~g~-----~C~~~c~~~~----~~~~~~~~c-~c~~g~~g~~~  175 (316)
T KOG1218|consen  119 CANPRRECRCGGGYIGEQCGE--ENLVGL-----KCQRDCQCTG----GCDCKNGIC-TCQPGFVGVFC  175 (316)
T ss_pred             cCCCccceecCCcCccccccc--cCCCCC-----CccCCCCCcc----ccCCCCCce-eccCCcccccc
Confidence            554223688899999998875  677776     4544442222    111111223 37889999887

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=85.11  E-value=0.26  Score=34.73  Aligned_cols=39  Identities=26%  Similarity=0.498  Sum_probs=16.1

Q ss_pred             cccCCCCCCCCCCCCCCCCC-------CccCCCceEEeCCCCCCCCC
Q psy9819         315 QCVCPPRRTGPDCQEEICPN-------ECHEFLNHGTCDLLLTGVHI  354 (377)
Q Consensus       315 ~C~C~~G~~G~~C~~~~C~~-------~C~~~~~~c~C~~g~~G~~C  354 (377)
                      +-.|.+.|.|.+|++.--|.       .|.. .|+=+|.+||+|..|
T Consensus        18 rv~C~~nyyG~~C~~~C~~~~d~~ghy~Cd~-~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   18 RVVCDENYYGPNCSKFCKPRDDSFGHYTCDS-NGNKVCLPGWTGPNC   63 (63)
T ss_dssp             -----TTEETTTT-EE---EEETTEEEEE-S-S--EEE-TTEESTTS
T ss_pred             EEECCCCCCCccccCCcCCCcCCcCCcccCC-CCCCCCCCCCcCCCC
Confidence            34566777777776531121       2332 355677777777765

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=82.71  E-value=1.2  Score=26.94  Aligned_cols=24  Identities=21%  Similarity=0.488  Sum_probs=19.2

Q ss_pred             CCCCCCCCCCccCC-CceEEeCCCC
Q psy9819         326 DCQEEICPNECHEF-LNHGTCDLLL  349 (377)
Q Consensus       326 ~C~~~~C~~~C~~~-~~~c~C~~g~  349 (377)
                      .|++..||..|..+ .+.|.|++||
T Consensus         2 fCn~t~CpA~CDpn~~~~C~CPeGy   26 (34)
T PF09064_consen    2 FCNQTECPADCDPNSPGQCFCPEGY   26 (34)
T ss_pred             ccccccCCCccCCCCCCceeCCCce
Confidence            57777888888775 5789999988

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=82.25  E-value=0.37  Score=32.41  Aligned_cols=28  Identities=25%  Similarity=0.655  Sum_probs=17.2

Q ss_pred             CCCCCCCee-cCC-------cccCCCCCCCCCCCCC
Q psy9819         303 DKCPENRTC-INN-------QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       303 ~~C~~~g~C-~~g-------~C~C~~G~~G~~C~~~  330 (377)
                      -+|++||+- +++       .|.|..-|.|.+|++.
T Consensus        17 i~CSGHGr~flDg~~~dG~p~CECn~Cy~GpdCS~~   52 (56)
T PF04863_consen   17 ISCSGHGRAFLDGLIADGSPVCECNSCYGGPDCSTL   52 (56)
T ss_dssp             S--TTSEE--TTS-EETTEE--EE-TTEESTTS-EE
T ss_pred             CCcCCCCeeeeccccccCCccccccCCcCCCCcccC
Confidence            359999988 344       6999999999999874

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=80.24  E-value=1.3  Score=35.43  Aligned_cols=25  Identities=36%  Similarity=0.777  Sum_probs=18.4

Q ss_pred             CCCCCeec--C----CcccCCCCCCCCCCCCC
Q psy9819         305 CPENRTCI--N----NQCVCPPRRTGPDCQEE  330 (377)
Q Consensus       305 C~~~g~C~--~----g~C~C~~G~~G~~C~~~  330 (377)
                      |.++ +|.  .    -.|+|+.||+|.+||..
T Consensus        53 ClHG-~C~yI~dl~~~~CrC~~GYtGeRCEh~   83 (139)
T PHA03099         53 CLHG-DCIHARDIDGMYCRCSHGYTGIRCQHV   83 (139)
T ss_pred             eECC-EEEeeccCCCceeECCCCcccccccce
Confidence            7764 782  1    16999999999999863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	377
1klo_A	162	Crystal Structure Of Three Consecutive Laminin-Type		2e-06
1npe_B	164	Crystal Structure Of Nidogen/laminin Complex Length		3e-06
4aqs_A	525	Laminin Beta1 Ln-Le1-4 Structure Length = 525		6e-05

>pdb|1KLO|A Chain A, Crystal Structure Of Three Consecutive Laminin-Type Epidermal Growth Factor-Like (Le) Modules Of Laminin Gamma1 Chain Harboring The Nidogen Binding Site Length = 162

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 80  ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
           +C  C   T G  C+ C  G +G+     G    CR C CN + + + +G C+ +TGEC+
Sbjct: 19  VCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECL 78
Query: 135 -CQDNTQGKNCERCLPGYYGDP 155
            C  NT G  C+RC  G++G+P
Sbjct: 79  KCIYNTAGFYCDRCKEGFFGNP 100

>pdb|1NPE|B Chain B, Crystal Structure Of Nidogen/laminin Complex Length = 164

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 80  ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
           +C  C   T G  C+ C  G +G+     G    CR C CN + + + +G C+ +TGEC+
Sbjct: 21  VCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECL 80
Query: 135 -CQDNTQGKNCERCLPGYYGDP 155
            C  NT G  C+RC  G++G+P
Sbjct: 81  KCIYNTAGFYCDRCKEGFFGNP 102

>pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure Length = 525

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 30/140 (21%)
Query: 65  NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNATTQ----E 108
            C CN HS+  H              G+CD C   T G +C+ C+   + +         
Sbjct: 317 KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPN 376
Query: 109 GCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG----DPT 156
            C  C C+  G+   G+CD         I G+C C+ + +G+ C+ C  G+Y     DP 
Sbjct: 377 LCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPY 436
Query: 157 DGGTCYYQCMARGMLTGPGP 176
              +C   C   G + G  P
Sbjct: 437 GCKSC--ACNPLGTIPGGNP 454

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	377
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	6e-22
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	6e-20
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	2e-06
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	1e-17
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	2e-13
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	5e-13
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	2e-08
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	1e-05
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	4e-15
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	1e-07
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	1e-06
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	1e-13
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	2e-08
3tbd_A	338	Netrin-G2, laminet-2; laminin N-terminal domain, d	8e-09
3tbd_A	338	Netrin-G2, laminet-2; laminin N-terminal domain, d	1e-06
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	7e-08
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	4e-05
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	3e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-06
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-06
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-05
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	7e-05
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	1e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	1e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	2e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	8e-05
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	5e-06
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	7e-06
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	5e-05
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	2e-04
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	6e-05
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	8e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	4e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	5e-04
1skz_A	119	Antistasin; factor XA inhibitor, serine protease i	4e-04
1skz_A	119	Antistasin; factor XA inhibitor, serine protease i	8e-04
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	5e-04

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162

 Score = 90.3 bits (224), Expect = 6e-22
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 61  DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE---GCRKCDCNS 117
            C+ N   N    C    G C +C   T G +C  C+ G +GN         C+ C CN 
Sbjct: 57  QCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNP 116

Query: 118 HG-NSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
           +G       C+ +TG+C C  +  G++C  C PGYY   +  G
Sbjct: 117 YGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQG 159

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162

 Score = 84.9 bits (210), Expect = 6e-20
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)

Query: 66  CLCNNHSTCVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNS 117
           C C   S+C         +C  C   T G  C+ C  G +G+     G    CR C CN 
Sbjct: 1   CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND 60

Query: 118 HGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
           + + + +G C+ +TGEC+ C  NT G  C+RC  G++G+P   
Sbjct: 61  NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAP 103

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 15/53 (28%), Positives = 18/53 (33%)

Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
           C C    +  +           C   T GK CE C  GY+GDP         C
Sbjct: 1   CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 83.6 bits (206), Expect = 1e-17
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 36  NKCIYGYCKGP------PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
            +C   Y + P      P+    C     G +    C      +     G C  C     
Sbjct: 358 EQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQC-RCKLHVE 416

Query: 90  GDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERC 147
           G+ C  C+ G Y  +     GC+ C CN  G       CDS TG C C+    G+ C++C
Sbjct: 417 GERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQC 476

Query: 148 LPGYYGDPTDGGTC 161
           LP ++G   D   C
Sbjct: 477 LPQHWGLSNDLDGC 490

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 70.5 bits (172), Expect = 2e-13
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 36  NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
           + C  G+     +    C+       C+        + C    G C  C    TG  C  
Sbjct: 421 DVCKEGFYDLSAEDPYGCK----SCACNPLGTIPGGNPCDSETGYC-YCKRLVTGQRCDQ 475

Query: 96  CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
           C    +G +   +GCR CDC+  G ++   C   +G+C C  +  G+ C 
Sbjct: 476 CLPQHWGLSNDLDGCRPCDCDLGG-ALNNSCSEDSGQCSCLPHMIGRQCN 524

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 69.3 bits (169), Expect = 5e-13
 Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 46/178 (25%)

Query: 34  CYNKCIYGYCKGPPDYSCQCELGWTGVDCS----------------------VNCLCNNH 71
                +    +G     C C     G++C                         C CN H
Sbjct: 264 APVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 323

Query: 72  STCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDC 115
           S+  H              G+CD C   T G +C+ C+   + +          C  C C
Sbjct: 324 SSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTC 383

Query: 116 NSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
           +  G+   G+CD         I G+C C+ + +G+ C+ C  G+Y    +       C
Sbjct: 384 DPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSC 441

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 35/132 (26%), Positives = 48/132 (36%), Gaps = 25/132 (18%)

Query: 59  GVDCSVNCLCNNH-STCVHGIGICDECHDW----------TTGDHCQYCRAGSY------ 101
            +    NC C  H S C    G+ +E              T G +C+ C    +      
Sbjct: 247 DMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP 306

Query: 102 GNATTQEGCRKCDCNSHGNS-------VLGVCDSITGECI-CQDNTQGKNCERCLPGYYG 153
                   C+KC+CN H +S        L   +   G C  CQ NT G+NCE+C P Y+ 
Sbjct: 307 AEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQ 366

Query: 154 DPTDGGTCYYQC 165
            P         C
Sbjct: 367 HPERDIRDPNLC 378

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 8/89 (8%)

Query: 82  DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS-------VLGVCDSITGECI 134
               D       +      Y           C C  H +           V   + G C+
Sbjct: 224 HTLGDNLLDSRMEIREKYYYAVYDMVVRGN-CFCYGHASECAPVDGVNEEVEGMVHGHCM 282

Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYY 163
           C+ NT+G NCE C+  Y+  P        
Sbjct: 283 CRHNTKGLNCELCMDFYHDLPWRPAEGRN 311

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375

 Score = 74.8 bits (183), Expect = 4e-15
 Identities = 26/119 (21%), Positives = 35/119 (29%), Gaps = 15/119 (12%)

Query: 56  GWTGVDCSVNCLCNNHSTCV---HGIGICDECHDWTTGDHCQYCRAGSYGNA------TT 106
             +       C CN H++         +   C   T G  C+ C               +
Sbjct: 245 AISDFAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAES 304

Query: 107 QEGCRKCDCNSHGNS-----VLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGG 159
              C  CDCN           L       G C  C+DNT G  CERC   ++       
Sbjct: 305 ASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEA 363

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375

 Score = 51.7 bits (123), Expect = 1e-07
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 81  CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
                     +  +  ++  Y  +       +C CN H +      +     C C+ NT 
Sbjct: 224 RLNTFGDEVFNEPKVLKSYYYAISDFA-VGGRCKCNGHASEC-VKNEFDKLMCNCKHNTY 281

Query: 141 GKNCERCLPGYYGDPTDGGTCYYQC 165
           G +CE+CLP +   P    T     
Sbjct: 282 GVDCEKCLPFFNDRPWRRATAESAS 306

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 11/64 (17%)

Query: 66  CLCNNHST----------CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
           C CN  S                G C  C D T G  C+ CR   +    T E C     
Sbjct: 311 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNT-EACSPAAA 369

Query: 116 NSHG 119
           + H 
Sbjct: 370 HHHH 373

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403

 Score = 70.7 bits (172), Expect = 1e-13
 Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 27/164 (16%)

Query: 29  FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC------VHGIGICD 82
           F  +      + G     P  + +       +     C+C+ H+        +    +  
Sbjct: 229 FLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQC 288

Query: 83  ECHDWTTGDHCQYCRAGSY------GNATTQEGCRKCDCNSH--------------GNSV 122
            C   T G  C  C  G            +   C+ C+C+ H               +  
Sbjct: 289 ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQN 348

Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
                   G C+ CQ +T G NCERCLPG++  P       + C
Sbjct: 349 QDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVC 392

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403

 Score = 54.5 bits (130), Expect = 2e-08
 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 10/91 (10%)

Query: 34  CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
             N+C    C G     C  +      +        N      G G+C +C   TTG +C
Sbjct: 318 SANECQSCNCHGHAY-DCYYD-----PEVDRREASQNQDNVYQGGGVCLDCQHHTTGINC 371

Query: 94  QYCRAGSYGNAT----TQEGCRKCDCNSHGN 120
           + C  G +        +   CR    + H +
Sbjct: 372 ERCLPGFFRAPDQPLDSPHVCRPAAAHHHHH 402

>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338

 Score = 55.7 bits (133), Expect = 8e-09
 Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 10/80 (12%)

Query: 84  CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQG 141
              +   ++                   +C CN H N     C    G  +C C+ NT G
Sbjct: 245 GGTYVQRENLYKYFYAISNIEV----IGRCKCNLHANL----CSMREGSLQCECEHNTTG 296

Query: 142 KNCERCLPGYYGDPTDGGTC 161
            +C +C   +       G+ 
Sbjct: 297 PDCGKCKKNFRTRSWRAGSY 316

>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338

 Score = 49.2 bits (116), Expect = 1e-06
 Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 13/87 (14%)

Query: 47  PDYSCQCELGWTGVDCSVNCLCNNH-STCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNA 104
            +   +     + ++    C CN H + C    G    EC   TTG  C  C+      +
Sbjct: 251 RENLYKYFYAISNIEVIGRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRS 310

Query: 105 T-----------TQEGCRKCDCNSHGN 120
                       +   C     + H +
Sbjct: 311 WRAGSYLPLPHGSPNACAAAGSHHHHH 337

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 53.2 bits (127), Expect = 7e-08
 Identities = 30/138 (21%), Positives = 42/138 (30%), Gaps = 16/138 (11%)

Query: 34  CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDH 92
            Y                +CE    G +C+  C  C N+  C    G C  C     G  
Sbjct: 170 RYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGEC-ICPPGFMGRT 228

Query: 93  CQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPG 150
           C+  C   ++G       C++      G      C      C C    +G  C   C PG
Sbjct: 229 CEKACELHTFG-----RTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPG 283

Query: 151 YYGDP-------TDGGTC 161
           +YG          +G  C
Sbjct: 284 FYGPDCKLRCSCNNGEMC 301

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 9/92 (9%)

Query: 65  NCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
           +    +           +      T    + C A  +G         +C+         G
Sbjct: 158 HAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGP--------ECNHLCTACMNNG 209

Query: 125 VCDSITGECICQDNTQGKNCER-CLPGYYGDP 155
           VC   TGECIC     G+ CE+ C    +G  
Sbjct: 210 VCHEDTGECICPPGFMGRTCEKACELHTFGRT 241

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 22/145 (15%), Positives = 31/145 (21%), Gaps = 16/145 (11%)

Query: 34  CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVHGIGI 80
               C       P  Y C C  GW G              DC + C CNN   C    G 
Sbjct: 248 GQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGC 307

Query: 81  CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
              C     G  C+                   + NS   + +            +    
Sbjct: 308 L--CSPGWQGLQCEREGIPRMTPKIVDLPDH-IEVNSGKFNPICKASGWPLPTNEEMTLV 364

Query: 141 GKNCERCLPGYYGDPTDGGTCYYQC 165
             +     P  +          +  
Sbjct: 365 KPDGTVLHPKDFNHTDHFSVAIFTI 389

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 6/130 (4%)

Query: 38  CIYGYCKGPPDYS---CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
           C  G C+  P +    CQCE    G        C+    C   +  C   +       C 
Sbjct: 535 CFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECP 594

Query: 95  YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ--GKNCERCLPGYY 152
            C +      +  E  +  +    G +    C  +              ++ E C   Y 
Sbjct: 595 GCPSPCGKYISCAECLK-FEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYT 653

Query: 153 GDPTDGGTCY 162
            +  DG   Y
Sbjct: 654 LEQQDGMDRY 663

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 48.2 bits (114), Expect = 3e-06
 Identities = 26/128 (20%), Positives = 35/128 (27%), Gaps = 14/128 (10%)

Query: 38  CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
           C      G   Y   CE      +     +C      +   G C  CH    G  CQ C 
Sbjct: 497 CHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKC-RCHPGFEGSACQ-CE 554

Query: 98  AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
             + G        R+ +C+  G             C C    Q   C+ C PG       
Sbjct: 555 RTTEG----CLNPRRVECSGRGRCR-------CNVCECHSGYQLPLCQEC-PGCPSPCGK 602

Query: 158 GGTCYYQC 165
             +C    
Sbjct: 603 YISCAECL 610

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 22/115 (19%), Positives = 32/115 (27%), Gaps = 6/115 (5%)

Query: 49  YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
           Y   C  G T  +      C+     V               +     RA  + +  T +
Sbjct: 360 YDSFCSNGVTHRNQP-RGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQ 418

Query: 109 GCRKCDCN-----SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
              +C+C         +   G      G C C     GKNCE    G      +G
Sbjct: 419 VLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEG 473

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 22/130 (16%), Positives = 34/130 (26%), Gaps = 28/130 (21%)

Query: 51  CQCELGWTGVDCSVNC-------------------LCNNHSTCVHGIGICDECHDWTTGD 91
           C+C+ G+ G +C                       +C+    CV G  +C          
Sbjct: 448 CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLI 507

Query: 92  HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
           + QYC   +       E      C   G           G+C C    +G  C+      
Sbjct: 508 YGQYCECDTIN----CERYNGQVCGGPGR-----GLCFCGKCRCHPGFEGSACQCERTTE 558

Query: 152 YGDPTDGGTC 161
                    C
Sbjct: 559 GCLNPRRVEC 568

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 25/109 (22%)

Query: 195 PSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS 254
           P  EC+W +          P   +L+ + P +N+ C +  V + +G P           S
Sbjct: 23  PKTECVWTL-------QVDPKYKLLVSI-PTLNLTCGKEYVEVLEGAPG----------S 64

Query: 255 TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK--QGKPSEGFNATYQIFSC 301
            +LG FC      G  +L   S  MT+ YK   G P+  +   +   S 
Sbjct: 65  KSLGKFCE-----GLSILNRGSSGMTVKYKRDSGHPASPYEIIFLRDSQ 108

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 49.1 bits (116), Expect = 1e-06
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 9/94 (9%)

Query: 68  CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD 127
             +    +    + +   D        Y         +  +   +C CN H      V D
Sbjct: 259 VTDLRIRLLRPAVGEIFVDELHLARYFYA-------ISDIKVRGRCKCNLHATVC--VYD 309

Query: 128 SITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
           +    C C+ NT G +C +C   Y G P   G+ 
Sbjct: 310 NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSY 343

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 23/114 (20%), Positives = 32/114 (28%), Gaps = 23/114 (20%)

Query: 56  GWTGVDCSVNCLCNNH-STCVHGIGICD-ECHDWTTGDHCQYCRAGSYGN---------- 103
             + +     C CN H + CV+       EC   TTG  C  C+    G           
Sbjct: 287 AISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPI 346

Query: 104 -ATTQEGCRKCDCNSHGNSVL---------GVCDSITGECICQDNTQGKNCERC 147
                  C     +   N            G C +    C+C     G  CE+ 
Sbjct: 347 PKGAANACIPSISSIGTNVCDNELLHCQNGGTCHN-NVRCLCPAAYTGILCEKL 399

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 43.3 bits (101), Expect = 8e-05
 Identities = 19/108 (17%), Positives = 30/108 (27%), Gaps = 28/108 (25%)

Query: 41  GYCKGPPDYSCQCELGWTGVDCSVN----CLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
            Y   P   +  C    + +  +V       C N  TC + +     C    TG  C+  
Sbjct: 342 SYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV--RCLCPAAYTGILCE-- 397

Query: 97  RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
                          K  C   G+     C S +G+      T   + 
Sbjct: 398 ---------------KLRCEEAGS-----CGSDSGQGAPPHGTHHHHH 425

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 24/109 (22%)

Query: 195 PSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS 254
               C W I          P   + + + P +N+ C +  V ++DGL             
Sbjct: 26  QKNLCTWTI-------LMKPDQKVRMAI-PYLNLACGKEYVEVFDGLLS----------G 67

Query: 255 TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK--QGKPSEGFNATYQIFSC 301
            + G  C         V  + +  MTI Y    G  S  F   +   S 
Sbjct: 68  PSYGKLCA----GAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYGSSP 112

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 47.0 bits (111), Expect = 7e-06
 Identities = 24/132 (18%), Positives = 36/132 (27%), Gaps = 19/132 (14%)

Query: 38  CIYGYCKGPPDYS---CQCELGWTGVDCSVNCLCNNHSTCVHGIGICD----ECHDWTTG 90
              G C+  P +    C+C            C            G C      CH    G
Sbjct: 455 FECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFG 514

Query: 91  DHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
               +YC    +         +   C+ H     G C    G+C+C  +  G  C     
Sbjct: 515 KITGKYCECDDFS----CVRYKGEMCSGH-----GQCS--CGDCLCDSDWTGYYCNCTTR 563

Query: 150 GYYGDPTDGGTC 161
                 ++G  C
Sbjct: 564 TDTCMSSNGLLC 575

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 18/109 (16%), Positives = 29/109 (26%), Gaps = 9/109 (8%)

Query: 38  CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
                      + C C         S  C  N + T   G+  C        G  C+ C 
Sbjct: 420 GFKDSLIVQVTFDCDCACQAQAEPNSHRC-NNGNGTFECGVCRCGPGW---LGSQCE-CS 474

Query: 98  AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
              Y          +C             + + G+C+C  +  GK   +
Sbjct: 475 EEDYR----PSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK 519

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 30/145 (20%), Positives = 41/145 (28%), Gaps = 20/145 (13%)

Query: 36  NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
            +C+             CE            +C+ H  C  G  +CD      TG +C  
Sbjct: 504 GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDW---TGYYCNC 560

Query: 95  YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI----TGE-----CICQDN-TQGKNC 144
             R  +  ++          C+  G    G C  I     G+       C D  T  K C
Sbjct: 561 TTRTDTCMSSNG------LLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKEC 614

Query: 145 ERCLPGYYGDPTDGGTCYYQCMARG 169
             C     G   D  TC   C    
Sbjct: 615 VECKKFDRGALHDENTCNRYCRDEI 639

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 24/105 (22%)

Query: 195 PSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS 254
           P   C+W I          P   + + +Q  + + CN+ ++ I DGLP           S
Sbjct: 27  PKTNCVWTI-------QMPPEYHVRVSIQ-YLQLNCNKESLEIIDGLPG----------S 68

Query: 255 TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK--QGKPSEGFNATYQ 297
             LG  C   +        +   +MT+ Y      P+  +   Y 
Sbjct: 69  PVLGKICEGSL----MDYRSSGSIMTVKYIREPEHPASFYEVLYF 109

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 28/118 (23%)

Query: 38  CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-----CHDWTTGDH 92
             +G  +G    +  C+  + G  C+  C   +      G   CD+     C +   G  
Sbjct: 8   HHHGSIEGR--SAVTCDDYYYGFGCNKFCRPRD---DFFGHYACDQNGNKTCMEGWMGPE 62

Query: 93  CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
           C                  +  C    +   G C    G+C CQ   QG  C++C+P 
Sbjct: 63  CN-----------------RAICRQGCSPKHGSCKL-PGDCRCQYGWQGLYCDKCIPH 102

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 26/137 (18%), Positives = 37/137 (27%), Gaps = 28/137 (20%)

Query: 34  CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC---LCNNHSTCVHGIGICDECHDWTTG 90
            +   +              +       C        C N   C     IC+ C D   G
Sbjct: 118 AFEVDVIVMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNER-RICE-CPDGFHG 175

Query: 91  DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
            HC+                    C + G  V        G CIC     G NC++    
Sbjct: 176 PHCEKA-------------LCTPRCMNGGLCV------TPGFCICPPGFYGVNCDKANCS 216

Query: 151 YYGDPTDGGTCY--YQC 165
                 +GGTC+   +C
Sbjct: 217 --TTCFNGGTCFYPGKC 231

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 38/166 (22%), Positives = 47/166 (28%), Gaps = 47/166 (28%)

Query: 34  CYNKCI-YGYCKGPPDYSCQCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECHDWTT 89
           C   C   G+C       C+C  G+ G  C        C N   CV   G C  C     
Sbjct: 151 CPGGCRNGGFCNER--RICECPDGFHGPHCEKALCTPRCMNGGLCVTP-GFC-ICPPGFY 206

Query: 90  GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE---- 145
           G +C                     C +      G C    G+CIC    +G+ CE    
Sbjct: 207 GVNCDKA-------------NCSTTCFNG-----GTCFY-PGKCICPPGLEGEQCEISKC 247

Query: 146 ----------------RCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
                           +C  GY GD      C   C A G    P 
Sbjct: 248 PQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPN 293

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 35/138 (25%)

Query: 33  LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECHDWT 88
           LC  +C+  G C  P    C C  G+ GV+C        C N  TC +  G C  C    
Sbjct: 182 LCTPRCMNGGLCVTP--GFCICPPGFYGVNCDKANCSTTCFNGGTCFYP-GKC-ICPPGL 237

Query: 89  TGDHCQY--------------------CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
            G+ C+                     C  G  G+  ++  C +  C +H     G C  
Sbjct: 238 EGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVC-EPGCGAH-----GTCHE 291

Query: 129 ITGECICQDNTQGKNCER 146
              +C CQ+   G++C +
Sbjct: 292 -PNKCQCQEGWHGRHCNK 308

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 297 QIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
           +I  CP  C     CI  ++C C     G  C + +C   C     HGTC
Sbjct: 243 EISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCG---AHGTC 289

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 297 QIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
              +C   C    TC    +C+CPP   G  C+   CP  C    N G C
Sbjct: 211 DKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCR---NGGKC 257

>1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 9/75 (12%)

Query: 90  GDHCQYCRAGSYG------NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
                +C  G             +    K  C+        +C  +T +C C+      N
Sbjct: 31  VRCRVHCPHGFQRSRYGCEFCKCRLEPMKATCDISECPEGMMCSRLTNKCDCK---IDIN 87

Query: 144 CERCLPGYYGDPTDG 158
           C +  P        G
Sbjct: 88  CRKTCPNGLKRDKLG 102

>1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 11/54 (20%), Positives = 13/54 (24%), Gaps = 3/54 (5%)

Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
           E      C   G      C+ IT  C C           C  G+         C
Sbjct: 1   EDPFGPGCEEAGCPEGSACNIITDRCTCSGVRC---RVHCPHGFQRSRYGCEFC 51

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus} Length = 387

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 16/80 (20%), Positives = 23/80 (28%)

Query: 282 HYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLN 341
             ++  P  G +  Y    CP  C  +  CI+  C C    T              E  +
Sbjct: 175 SSQKNVPPFGLDGVYISEPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVSNTPNHSEMFD 234

Query: 342 HGTCDLLLTGVHITHGRTLH 361
                L      IT G+   
Sbjct: 235 RFEGKLSPLWYKITGGQVGT 254

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	377
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.73
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	99.69
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	99.69
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	99.61
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.58
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.56
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.55
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.49
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.48
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.45
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.3
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	99.29
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.26
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.19
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.19
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.17
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.12
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.09
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.08
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.04
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	98.98
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.94
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.78
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.77
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	98.77
1szb_A	170	Mannose binding lectin-associated serine protease-	98.68
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.64
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.52
1nzi_A	159	Complement C1S component; calcium, innate immunity	98.51
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.5
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.48
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.44
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	98.42
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.41
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.4
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	98.32
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.31
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	98.31
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.31
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.25
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.23
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.19
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.18
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.17
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	98.14
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	98.14
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.13
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	98.12
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.08
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	98.07
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.07
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.99
2vh0_B	134	Activated factor XA light chain; serine protease,	97.98
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.98
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.96
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.96
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.95
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.91
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	97.9
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.86
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.85
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.82
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.8
3dem_A	278	Complement factor MAsp-3; complement system, innat	97.8
3dem_A	278	Complement factor MAsp-3; complement system, innat	97.77
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.76
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	97.75
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.71
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	97.68
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.62
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.62
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.54
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.54
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.53
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.5
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.5
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.48
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.46
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	97.43
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	97.4
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	97.39
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	97.38
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.37
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	97.35
2vh0_B	134	Activated factor XA light chain; serine protease,	97.35
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	97.3
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.25
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.22
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.21
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	97.15
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	97.14
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	97.13
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.1
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.08
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.05
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	97.02
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.0
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	96.99
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	96.96
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.95
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.89
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.78
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.78
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	96.74
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	96.74
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.52
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	96.44
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.32
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.27
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.25
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	96.15
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.13
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	96.11
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	96.08
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.98
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	95.97
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	95.96
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	95.82
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	95.77
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	94.51
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	94.37
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.35
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	93.72
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	93.57
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.18
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	93.13
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.13
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	93.02
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.44
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	91.94
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	91.82
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	91.58
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.34
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	91.25
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	91.22
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	91.13
3v65_B	386	Low-density lipoprotein receptor-related protein;	90.92
3tbd_A	338	Netrin-G2, laminet-2; laminin N-terminal domain, d	90.34
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.0
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	89.94
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	89.79
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	89.33
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	89.24
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	87.94
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	86.85
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	86.36
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	85.8
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	85.43
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	85.31
2wph_E	59	Coagulation factor IXA light chain; serine proteas	82.6
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	81.76
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	81.34

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.73  E-value=7.3e-18  Score=158.54  Aligned_cols=91  Identities=33%  Similarity=0.841  Sum_probs=63.4

Q ss_pred             CCcCCCCCC-CeecCCCCeeeecCCCCccCCCCC-CC--CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819          32 SLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV-NC--LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ  107 (377)
Q Consensus        32 ~~C~~~C~~-G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~  107 (377)
                      +.|+++|++ |+|+.  .++|+|++||+|.+|+. .|  +|.++|+|+. ++.| .|++||+|.+|+.            
T Consensus       149 ~~C~~~C~~~G~C~~--~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-~~~C-~C~~G~~G~~C~~------------  212 (324)
T 2ygq_A          149 AECPGGCRNGGFCNE--RRICECPDGFHGPHCEKALCTPRCMNGGLCVT-PGFC-ICPPGFYGVNCDK------------  212 (324)
T ss_dssp             CCCSSCCCSSCEECT--TSCEECCTTEESSSSCEESSSSCCCTTCEECS-SCCE-ECCTTCBTTTTCB------------
T ss_pred             CCCCCCCCCCCEECC--CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcC-CCEE-eCCCCccCCCccc------------
Confidence            567778875 88875  46888888888888885 34  5778888865 5677 5777777766652            


Q ss_pred             CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCc
Q psy9819         108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE  145 (377)
Q Consensus       108 ~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~  145 (377)
                      ..|. .+|.++|     +|.. ++.|.|.+||+|..|+
T Consensus       213 ~~C~-~~C~~~G-----~C~~-~~~C~C~~G~~G~~C~  243 (324)
T 2ygq_A          213 ANCS-TTCFNGG-----TCFY-PGKCICPPGLEGEQCE  243 (324)
T ss_dssp             CCCS-SCCCSSC-----CBSC-SSCBCCCTTCCTTTTC
T ss_pred             CcCC-CCCCCCC-----eeCC-CCeeeCCCCccCCCCC
Confidence            2333 2566665     6754 5678888888777776

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=99.69  E-value=1.5e-16  Score=159.76  Aligned_cols=192  Identities=26%  Similarity=0.588  Sum_probs=122.4

Q ss_pred             eeEEEecCCCCCcccccc-------cceeeeEeeecCCCcCC--------------------------CC-CC-CeecC-
Q psy9819           2 SIIFRISGLTTAKDDALS-------RCTVLLLYIFNASLCYN--------------------------KC-IY-GYCKG-   45 (377)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~C~~--------------------------~C-~~-G~C~~-   45 (377)
                      .||+++|.+...+.|+|+       +.|.||++++....-..                          .| .| ..|.. 
T Consensus       187 ~v~~~~~~~~~~~~~~~s~~l~~~~~~t~iri~~~~~~~~~~~~~~~~~~~~~~~~Yai~di~v~grC~CnGHa~~C~p~  266 (525)
T 4aqs_A          187 EVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPV  266 (525)
T ss_dssp             EEEEESSCSSSCCSCTTSHHHHHHHEEEEEEEEEEECCCTTCCCTTCCHHHHTTCCCEEEEEEEEEECCCTTBCSCEECC
T ss_pred             eEEEEecCCCcccCCCCChhhhhhhhhhhhhhheecccccccccccccccccccccEEEEeeEECeEeccCCccccCCCc
Confidence            489999976655677766       67777776654322110                          13 23 23431 


Q ss_pred             ---------CCCeeeecCCCCccCCCCC----------------------CCCCCCCc-eee-----------cCCCccc
Q psy9819          46 ---------PPDYSCQCELGWTGVDCSV----------------------NCLCNNHS-TCV-----------HGIGICD   82 (377)
Q Consensus        46 ---------~~~~~C~C~~G~~G~~C~~----------------------~C~C~~~g-~C~-----------~~~~~C~   82 (377)
                               ...++|.|++||+|.+|++                      .|.|++++ .|.           ...++|.
T Consensus       267 ~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~  346 (525)
T 4aqs_A          267 DGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCD  346 (525)
T ss_dssp             ------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEE
T ss_pred             CCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCccc
Confidence                     2256899999999999984                      12455554 454           1245676


Q ss_pred             CCCCCCCCCCCCCCCCCcccCCCCC----CCccCCCCCCCCCcCcccccC--------CCcceecCCCCccCCCccCCCC
Q psy9819          83 ECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPG  150 (377)
Q Consensus        83 ~C~~g~~G~~C~~C~~g~~g~~c~~----~~C~~~~C~~~g~~~~g~C~~--------~~g~C~C~~g~~G~~C~~C~~G  150 (377)
                      .|.++|.|.+|+.|.++|++.....    ..+.++.|...+......|..        ..+.|.|.++|.|.+|++|.+|
T Consensus       347 ~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~C~~G  426 (525)
T 4aqs_A          347 NCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEG  426 (525)
T ss_dssp             SCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTCEECTT
T ss_pred             CCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCcccCCCCC
Confidence            8999999999999999999876543    334455555444332223332        2468999999999999999999


Q ss_pred             ccCCCCC-CCCCCC-CCCCCCCCC--CCCCCCCCCcccCCCCCccCCC
Q psy9819         151 YYGDPTD-GGTCYY-QCMARGMLT--GPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       151 ~~g~~~~-~~~C~~-~C~~~g~~~--~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      |+|..+. ...|.. .|...+++.  ..|....|.+ .|++||+|..|
T Consensus       427 y~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C-~C~~g~~G~~C  473 (525)
T 4aqs_A          427 FYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYC-YCKRLVTGQRC  473 (525)
T ss_dssp             EECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCB-CBCTTCCSTTT
T ss_pred             CcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEE-ECCCCCcCCCc
Confidence            9998653 233443 565555443  2333333333 46667777765

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=99.69  E-value=1.7e-17  Score=140.60  Aligned_cols=119  Identities=32%  Similarity=0.822  Sum_probs=100.3

Q ss_pred             CCCC-CeecCC---CCeee-ecCCCCccCCCCC--------------------CCCCCCC------ceeecCCCcccCCC
Q psy9819          37 KCIY-GYCKGP---PDYSC-QCELGWTGVDCSV--------------------NCLCNNH------STCVHGIGICDECH   85 (377)
Q Consensus        37 ~C~~-G~C~~~---~~~~C-~C~~G~~G~~C~~--------------------~C~C~~~------g~C~~~~~~C~~C~   85 (377)
                      ||+| |+|+..   +.++| .|+++|+|..|++                    +|.|+++      ++|+..+++|+.|+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~   81 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCI   81 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCC
Confidence            4766 789743   35799 7999999999984                    2567776      57988899995599


Q ss_pred             CCCCCCCCCCCCCCcccCCCCC---CCccCCCCCCCCCcCc-ccccCCCcceecCCCCccCCCccCCCCccCCC
Q psy9819          86 DWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSHGNSVL-GVCDSITGECICQDNTQGKNCERCLPGYYGDP  155 (377)
Q Consensus        86 ~g~~G~~C~~C~~g~~g~~c~~---~~C~~~~C~~~g~~~~-g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~  155 (377)
                      ++|+|.+||+|++||||..+..   ..|+++.|++.|+... ++|+..+|+|.|+++|+|.+|++|.+||++..
T Consensus        82 ~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~  155 (162)
T 1klo_A           82 YNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQ  155 (162)
T ss_dssp             TTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGG
T ss_pred             CCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCC
Confidence            9999999999999999998762   5799999998875432 48998899999999999999999999999873

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=99.61  E-value=3.3e-16  Score=132.62  Aligned_cols=128  Identities=30%  Similarity=0.729  Sum_probs=100.9

Q ss_pred             CCCCCCceeecC----CCcccCCCCCCCCCCCCCCCCCcccCCCCC----CCccCCCCCCCCCcC-cccccCCCccee-c
Q psy9819          66 CLCNNHSTCVHG----IGICDECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSV-LGVCDSITGECI-C  135 (377)
Q Consensus        66 C~C~~~g~C~~~----~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~----~~C~~~~C~~~g~~~-~g~C~~~~g~C~-C  135 (377)
                      |+|+++++|+..    .++|+.|+++|+|.+||+|++||+|.....    ..|+++.|++++... .++|+..+++|. |
T Consensus         1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C   80 (162)
T 1klo_A            1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKC   80 (162)
T ss_dssp             CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCB
T ss_pred             CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCC
Confidence            578999999854    468966999999999999999999987653    468889998875321 247888899995 9


Q ss_pred             CCCCccCCCccCCCCccCCCCC---CCCCCC-CCCCCCCCCC--CCCCCCCCcccCCCCCccCCC
Q psy9819         136 QDNTQGKNCERCLPGYYGDPTD---GGTCYY-QCMARGMLTG--PGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       136 ~~g~~G~~C~~C~~G~~g~~~~---~~~C~~-~C~~~g~~~~--~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      +++|+|.+|++|++||+|++..   ...|.. .|+..++.+.  .|....|.+ .|++||+|+.|
T Consensus        81 ~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C-~C~~g~~G~~C  144 (162)
T 1klo_A           81 IYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC-QCLPHVSGRDC  144 (162)
T ss_dssp             CTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCC-CBCTTEESTTC
T ss_pred             CCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEe-ECCCCCcCCCC
Confidence            9999999999999999998754   234554 7777775543  565555555 68899999998

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.58  E-value=2.7e-15  Score=153.15  Aligned_cols=90  Identities=31%  Similarity=0.909  Sum_probs=66.6

Q ss_pred             CCCCC-Ceec-CCCCee---eecCCCCccCCCCCC-----------CC-------CCCCceeecCCCcccCCC----CCC
Q psy9819          36 NKCIY-GYCK-GPPDYS---CQCELGWTGVDCSVN-----------CL-------CNNHSTCVHGIGICDECH----DWT   88 (377)
Q Consensus        36 ~~C~~-G~C~-~~~~~~---C~C~~G~~G~~C~~~-----------C~-------C~~~g~C~~~~~~C~~C~----~g~   88 (377)
                      +||.| ++|. ..+++.   |.|++||+|..|+.+           |.       |+++|+|.  .+.| .|.    +||
T Consensus       440 ~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C-~C~~~~~~Gy  516 (690)
T 3fcs_B          440 QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQC-VCHSSDFGKI  516 (690)
T ss_dssp             TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSE-EECCCSSCCC
T ss_pred             CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCee-EeecCCCCCe
Confidence            47877 7798 455666   999999999999742           52       88899997  4789 688    888


Q ss_pred             CCCCCCCCCCCcccCCCCCCCccC---CCCCCCCCcCcccccCCCcceecCCCCccCCCc
Q psy9819          89 TGDHCQYCRAGSYGNATTQEGCRK---CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE  145 (377)
Q Consensus        89 ~G~~C~~C~~g~~g~~c~~~~C~~---~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~  145 (377)
                      +|.+||.          +...|..   .+|.++|     +|..  +.|.|.+||+|.+|+
T Consensus       517 ~G~~Ce~----------~~~~C~~~~~~~C~~~G-----~C~~--g~C~C~~Gy~G~~Ce  559 (690)
T 3fcs_B          517 TGKYCEC----------DDFSCVRYKGEMCSGHG-----QCSC--GDCLCDSDWTGYYCN  559 (690)
T ss_dssp             BSTTSCB----------CSSCCCBSSSSBGGGSE-----EEET--TEEEECTTEESSSSC
T ss_pred             eCCCcCc----------ccCcCcCCCCCCCCCCC-----EecC--CeeECcCCCcCCCCc
Confidence            8888862          1123432   2466655     7863  899999999999987

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.56  E-value=2.8e-15  Score=145.82  Aligned_cols=130  Identities=26%  Similarity=0.615  Sum_probs=102.8

Q ss_pred             eeeecCCCCccCCCCCCC-CCCCCceeecCCCcccCCCCCCCCCCCCC-CCCCcccCCCCCCCcc-CCCCCCCCCcCccc
Q psy9819          49 YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGV  125 (377)
Q Consensus        49 ~~C~C~~G~~G~~C~~~C-~C~~~g~C~~~~~~C~~C~~g~~G~~C~~-C~~g~~g~~c~~~~C~-~~~C~~~g~~~~g~  125 (377)
                      +.|.|++||+|+.|+..| +|.++|+|+..++.| .|++||+|.+|+. |.++|+|..|.. .|. ...|.+++     +
T Consensus       185 ~~c~C~~g~~G~~C~~~C~~C~~~G~C~~~~g~C-~C~~G~~G~~Ce~~C~~g~~g~~C~~-~C~~~~~C~~~g-----~  257 (423)
T 2gy5_A          185 IVRRCEAQKWGPECNHLCTACMNNGVCHEDTGEC-ICPPGFMGRTCEKACELHTFGRTCKE-RCSGQEGCKSYV-----F  257 (423)
T ss_dssp             EECSSCTTEESTTSCEECCCCCTTCEECTTTCCE-ECCTTEESTTSCEECCTTEESTTSCE-ECCSTTTTTTCC-----E
T ss_pred             cCCcCCCCCCCCCCCCCCCCCCCCCEEECCCCcE-eCCCCccCCCcccccCCCCCCCCcCc-cCCCCCCCCCCC-----E
Confidence            368999999999999878 799999999888999 7999999999996 999999988762 232 12344444     7


Q ss_pred             ccCCCcceecCCCCccCCCcc-CCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819         126 CDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       126 C~~~~g~C~C~~g~~G~~C~~-C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      |...++.|.|++||.|.+|+. |.+||+|..++. .|  .|.+.+.+.    +..+  ..|++||+|.+|
T Consensus       258 C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~-~C--~C~ngg~C~----~~~~--C~C~~G~~G~~C  318 (423)
T 2gy5_A          258 CLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKL-RC--SCNNGEMCD----RFQG--CLCSPGWQGLQC  318 (423)
T ss_dssp             EETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCC-BC--CCTTCCEEE----TTTE--EECCTTCBSTTS
T ss_pred             ECCCCCeEEeCCCcccccccCccCCCCcCCcccc-cc--cCCCCCEec----CCCc--eECCCCCcCCCC
Confidence            877789999999999999996 999999984432 22  566665443    2222  378999999998

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.55  E-value=4.8e-15  Score=139.33  Aligned_cols=159  Identities=23%  Similarity=0.536  Sum_probs=57.5

Q ss_pred             cCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9819         102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS  181 (377)
Q Consensus       102 g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~g~  181 (377)
                      +..|....|. .+|.++|     +|.. .+.|.|.+||+|.+|+.            ..|...|.+.+.+..     .+.
T Consensus       143 ~~~C~~~~C~-~~C~~~G-----~C~~-~~~C~C~~G~~G~~C~~------------~~C~~~C~~~G~C~~-----~~~  198 (324)
T 2ygq_A          143 FKTCQQAECP-GGCRNGG-----FCNE-RRICECPDGFHGPHCEK------------ALCTPRCMNGGLCVT-----PGF  198 (324)
T ss_dssp             EEEECCCCCS-SCCCSSC-----EECT-TSCEECCTTEESSSSCE------------ESSSSCCCTTCEECS-----SCC
T ss_pred             cccccCCCCC-CCCCCCC-----EECC-CCeEECCCCCcCCCCCC------------CCCCCCCCCCCEEcC-----CCE
Confidence            3333333443 3688777     8875 68999999999999984            134446666664432     122


Q ss_pred             cccCCCCCccCCCCCCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCc
Q psy9819         182 GLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC  261 (377)
Q Consensus       182 ~~~c~~G~~G~~Cp~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C  261 (377)
                       ..|.+||+|..|....|.                           ..|..+                         ..|
T Consensus       199 -C~C~~G~~G~~C~~~~C~---------------------------~~C~~~-------------------------G~C  225 (324)
T 2ygq_A          199 -CICPPGFYGVNCDKANCS---------------------------TTCFNG-------------------------GTC  225 (324)
T ss_dssp             -EECCTTCBTTTTCBCCCS---------------------------SCCCSS-------------------------CCB
T ss_pred             -EeCCCCccCCCcccCcCC---------------------------CCCCCC-------------------------Cee
Confidence             278899999987211111                           112111                         112


Q ss_pred             CCCCcCCCcceecCCCeeEeccCCCCCCCCCcc-cccccCCCCCCCCCCeecC-CcccCCCCCCCCCCCCCCCCCCccCC
Q psy9819         262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNA-TYQIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEF  339 (377)
Q Consensus       262 ~~~~~~~p~~c~~~sG~~~v~~~s~~c~~GF~g-~~~~~~C~~~C~~~g~C~~-g~C~C~~G~~G~~C~~~~C~~~C~~~  339 (377)
                      ..                   ...+.|.+||.| .++++.|+.+|.++|+|+. .+|.|++||+|.+|+.+.|+..|.++
T Consensus       226 ~~-------------------~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~  286 (324)
T 2ygq_A          226 FY-------------------PGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAH  286 (324)
T ss_dssp             SC-------------------SSCBCCCTTCCTTTTC-------------------------------------------
T ss_pred             CC-------------------CCeeeCCCCccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCC
Confidence            11                   123566788998 6777789888999999975 58999999999999988888777654


Q ss_pred             -----CceEEeCCCCCCCCCCC
Q psy9819         340 -----LNHGTCDLLLTGVHITH  356 (377)
Q Consensus       340 -----~~~c~C~~g~~G~~C~~  356 (377)
                           .++|.|.+||+|.+|+.
T Consensus       287 g~C~~~~~C~C~~G~~G~~C~~  308 (324)
T 2ygq_A          287 GTCHEPNKCQCQEGWHGRHCNK  308 (324)
T ss_dssp             ----------------------
T ss_pred             CEECCCCEeECCCCCcCCCCCC
Confidence                 47889999999999984

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.49  E-value=2e-17  Score=148.86  Aligned_cols=80  Identities=8%  Similarity=-0.053  Sum_probs=60.1

Q ss_pred             ccCCCCCCCCCCeecCC----cccCCCCCCCCCCCCCC--CCC-------CccCC-CceEEeCCCCCCCCC----CCCCe
Q psy9819         298 IFSCPDKCPENRTCINN----QCVCPPRRTGPDCQEEI--CPN-------ECHEF-LNHGTCDLLLTGVHI----THGRT  359 (377)
Q Consensus       298 ~~~C~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~--C~~-------~C~~~-~~~c~C~~g~~G~~C----~~g~~  359 (377)
                      ++.+..+|.++|+|+++    +|.|++||+|.+|+.++  |.+       .|.+. ...+.|.+++.+..|    .+|+|
T Consensus       167 i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGt  246 (267)
T 4fbr_A          167 VINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGK  246 (267)
T ss_dssp             EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTS
T ss_pred             cccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCE
Confidence            33445679999999887    69999999999999764  211       12221 123447888877654    58999


Q ss_pred             ecccccCeeeecCCCeeC
Q psy9819         360 LHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       360 ~~~~~~~~~c~~~~~~~~  377 (377)
                      |++.+++|+|.|++||+.
T Consensus       247 C~dg~~sy~CeCp~GF~G  264 (267)
T 4fbr_A          247 TLAGTMIYNGEGPIGFRA  264 (267)
T ss_dssp             EEEEEEEETTSCCEEEEE
T ss_pred             eeCCCcceeecCCCCccc
Confidence            999999999999999973

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.48  E-value=1.1e-14  Score=124.29  Aligned_cols=80  Identities=30%  Similarity=0.712  Sum_probs=55.7

Q ss_pred             CeeeecCCCCccCCCCCCC----CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCC-CCCCcC
Q psy9819          48 DYSCQCELGWTGVDCSVNC----LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN-SHGNSV  122 (377)
Q Consensus        48 ~~~C~C~~G~~G~~C~~~C----~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~-~~g~~~  122 (377)
                      .+.|+|++||+|..|+..|    .|.++++|+. +++| .|++||+|..|+.            ..|.. .|. .+|   
T Consensus        16 ~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~-~g~C-~C~~G~~G~~C~~------------~~C~~-~C~~~~g---   77 (169)
T 2vj2_A           16 RSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQ-NGNK-TCMEGWMGPECNR------------AICRQ-GCSPKHG---   77 (169)
T ss_dssp             -----CCTTEETTTTCEECCCEEETTEEEEECS-SCCE-EECTTEESTTSCE------------ECCCT-TCCTTTE---
T ss_pred             CeeeeCCCcCcCCCcccccCCCCCcCCCCEeCC-CCee-ECCCCCcCCCCCC------------CCCCC-CCCCCCc---
Confidence            5689999999999999766    3777889974 7889 6888888877753            22322 343 333   


Q ss_pred             cccccCCCcceecCCCCccCCCccCC
Q psy9819         123 LGVCDSITGECICQDNTQGKNCERCL  148 (377)
Q Consensus       123 ~g~C~~~~g~C~C~~g~~G~~C~~C~  148 (377)
                        +|.. +++|.|++||+|..|++|.
T Consensus        78 --~C~~-~~~C~C~~G~~G~~C~~C~  100 (169)
T 2vj2_A           78 --SCKL-PGDCRCQYGWQGLYCDKCI  100 (169)
T ss_dssp             --ECSS-TTCCEECTTEESSSSCEEC
T ss_pred             --ccCC-CCeeECCCCCCCCCcccCC
Confidence              6765 6899999999999998654

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.45  E-value=9.6e-14  Score=134.95  Aligned_cols=106  Identities=31%  Similarity=0.768  Sum_probs=86.6

Q ss_pred             CCCcCC---CCCC-CeecCCCCeeeecCCCCccCCCCCC-------------C----CCCCCceeecCCCcccCCCCCCC
Q psy9819          31 ASLCYN---KCIY-GYCKGPPDYSCQCELGWTGVDCSVN-------------C----LCNNHSTCVHGIGICDECHDWTT   89 (377)
Q Consensus        31 ~~~C~~---~C~~-G~C~~~~~~~C~C~~G~~G~~C~~~-------------C----~C~~~g~C~~~~~~C~~C~~g~~   89 (377)
                      ++.|..   ||++ |+|+. .+++|.|++||+|..|++.             |    .|.++++|...++.| .|++||+
T Consensus       195 G~~C~~~C~~C~~~G~C~~-~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C-~C~~G~~  272 (423)
T 2gy5_A          195 GPECNHLCTACMNNGVCHE-DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGC-SCATGWK  272 (423)
T ss_dssp             STTSCEECCCCCTTCEECT-TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEE-ECCBTCB
T ss_pred             CCCCCCCCCCCCCCCEEEC-CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeE-EeCCCcc
Confidence            345553   7865 99995 5689999999999999852             2    256677888889999 7999999


Q ss_pred             CCCCCC-CCCCcccCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCC
Q psy9819          90 GDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL  148 (377)
Q Consensus        90 G~~C~~-C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~  148 (377)
                      |.+|+. |.+||+|..|+.    +++|.+++     +|+...+ |.|++||+|.+|+.+.
T Consensus       273 G~~C~~~C~~G~~G~~C~~----~C~C~ngg-----~C~~~~~-C~C~~G~~G~~Ce~~~  322 (423)
T 2gy5_A          273 GLQCNEACHPGFYGPDCKL----RCSCNNGE-----MCDRFQG-CLCSPGWQGLQCEREG  322 (423)
T ss_dssp             SGGGCBCCCTTBCSBTTCC----BCCCTTCC-----EEETTTE-EECCTTCBSTTSCBCS
T ss_pred             cccccCccCCCCcCCcccc----cccCCCCC-----EecCCCc-eECCCCCcCCCCccCc
Confidence            999996 999999998873    46788877     8876544 9999999999999753

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.30  E-value=5.9e-13  Score=135.60  Aligned_cols=68  Identities=31%  Similarity=0.786  Sum_probs=50.5

Q ss_pred             CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCC----CCCCCCCcCcccccCCCcceecC------
Q psy9819          67 LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC----DCNSHGNSVLGVCDSITGECICQ------  136 (377)
Q Consensus        67 ~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~----~C~~~g~~~~g~C~~~~g~C~C~------  136 (377)
                      .|+++|+|.  .++| .|.+||+|.+|+ |..++++.......|...    .|.++|     +|.  .++|.|.      
T Consensus       436 ~Cs~~G~C~--~g~C-~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G-----~C~--~G~C~C~~~~~~~  504 (687)
T 3k6s_B          436 LCHGKGFLE--CGIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG-----DCV--CGQCLCHTSDVPG  504 (687)
T ss_dssp             TGGGSEEES--SSSE-EECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSE-----EEE--TTEEEECCCCSTT
T ss_pred             CCCCCCEEe--CCEe-EcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCC-----EEe--CCEEEcCCCCCCC
Confidence            577788887  5789 799999999998 776665543222345432    377666     887  5799999      


Q ss_pred             CCCccCCCc
Q psy9819         137 DNTQGKNCE  145 (377)
Q Consensus       137 ~g~~G~~C~  145 (377)
                      +||.|.+|+
T Consensus       505 ~G~~G~~Ce  513 (687)
T 3k6s_B          505 KLIYGQYCE  513 (687)
T ss_dssp             CCEESTTSC
T ss_pred             CCccccccc
Confidence            999999997

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=99.29  E-value=1.6e-12  Score=130.34  Aligned_cols=115  Identities=30%  Similarity=0.673  Sum_probs=59.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcccCCCCC-CCccCCCCCCCCCcC-cccccCCCcceecCCCCccCCCccCCCCccCCC
Q psy9819          78 IGICDECHDWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSV-LGVCDSITGECICQDNTQGKNCERCLPGYYGDP  155 (377)
Q Consensus        78 ~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~-~~C~~~~C~~~g~~~-~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~  155 (377)
                      .+.| .|.++|.|.+|+.|++||+|..+.. ..|.+++|.+++... .+.|+..++.|.|++||+|.+|++|.+||++..
T Consensus       406 ~~~C-~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~  484 (525)
T 4aqs_A          406 AGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLS  484 (525)
T ss_dssp             SSCC-CBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------
T ss_pred             CCcc-CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCC
Confidence            4678 7999999999999999999998875 678999998877643 357887789999999999999999999999987


Q ss_pred             CCCCCCCC-CCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819         156 TDGGTCYY-QCMARGMLTGPGPQGLGSGLAERNAWEGKDT  194 (377)
Q Consensus       156 ~~~~~C~~-~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C  194 (377)
                      .+...|.. .|++.+.+...|....|.+ .|++||+|+.|
T Consensus       485 ~~~~~C~~C~C~~~gs~~~~C~~~tG~C-~C~~G~~G~~C  523 (525)
T 4aqs_A          485 NDLDGCRPCDCDLGGALNNSCSEDSGQC-SCLPHMIGRQC  523 (525)
T ss_dssp             ----------------------------------------
T ss_pred             CCCCCCcCCCCCCCCccCCccCCCCCee-ECCCCCcCCCC
Confidence            66666765 7888887777776655555 68999999987

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.26  E-value=5.6e-12  Score=103.33  Aligned_cols=99  Identities=31%  Similarity=0.772  Sum_probs=74.6

Q ss_pred             CCCcC---CCCCC-CeecCC-CCeeeecCCCCccCCCCC---CC---CCCCCceeec--CCCcccCCCCCCCCCCCCCCC
Q psy9819          31 ASLCY---NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---NC---LCNNHSTCVH--GIGICDECHDWTTGDHCQYCR   97 (377)
Q Consensus        31 ~~~C~---~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~C---~C~~~g~C~~--~~~~C~~C~~g~~G~~C~~C~   97 (377)
                      +..|.   +||++ |+|++. ++|+|+|++||+|..|++   +|   +|.++++|+.  +.++| .|++||+|.+|+.  
T Consensus         5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C-~C~~G~~G~~C~~--   81 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQC-ICMPGYEGVHCEV--   81 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEE-ECCTTEESSSSCE--
T ss_pred             cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCcee-eCCCCCcCCccee--
Confidence            45564   68976 899864 489999999999999974   34   6888899984  45789 6887777777752  


Q ss_pred             CCcccCCCCCCCccCCCCCCCCCcCcccccCC--CcceecCCCCccCCCc
Q psy9819          98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI--TGECICQDNTQGKNCE  145 (377)
Q Consensus        98 ~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~~C~  145 (377)
                              ..+.|...+|.+++     +|...  .+.|.|++||+|.+|+
T Consensus        82 --------~~~~C~~~~C~~~g-----~C~~~~g~~~C~C~~G~~G~~C~  118 (135)
T 2vj3_A           82 --------NTDECASSPCLHNG-----RCLDKINEFQCECPTGFTGHLCQ  118 (135)
T ss_dssp             --------ECCTTTTCCSTTTC-----EEEECSSCEEEECCTTEESSSSC
T ss_pred             --------cCCcccCCCcCCCC-----EeECCCCCeEEECCCCCcCCccC
Confidence                    12456666787766     77643  3589999999999987

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.19  E-value=1.8e-11  Score=124.80  Aligned_cols=52  Identities=33%  Similarity=0.924  Sum_probs=41.1

Q ss_pred             CCC-CCeecCCCCeeeecCCCCccCCCCC------------CCC-------CCCCceeecCCCcccCCC------CCCCC
Q psy9819          37 KCI-YGYCKGPPDYSCQCELGWTGVDCSV------------NCL-------CNNHSTCVHGIGICDECH------DWTTG   90 (377)
Q Consensus        37 ~C~-~G~C~~~~~~~C~C~~G~~G~~C~~------------~C~-------C~~~g~C~~~~~~C~~C~------~g~~G   90 (377)
                      +|. ||+|.   .+.|.|++||+|..|+.            .|.       |+++|+|.  .+.| .|.      +||+|
T Consensus       436 ~Cs~~G~C~---~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C-~C~~~~~~~~G~~G  509 (687)
T 3k6s_B          436 LCHGKGFLE---CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQC-LCHTSDVPGKLIYG  509 (687)
T ss_dssp             TGGGSEEES---SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEE-EECCCCSTTCCEES
T ss_pred             CCCCCCEEe---CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEE-EcCCCCCCCCCccc
Confidence            564 57777   35899999999999982            352       88899998  4689 788      88888


Q ss_pred             CCCC
Q psy9819          91 DHCQ   94 (377)
Q Consensus        91 ~~C~   94 (377)
                      .+|+
T Consensus       510 ~~Ce  513 (687)
T 3k6s_B          510 QYCE  513 (687)
T ss_dssp             TTSC
T ss_pred             cccc
Confidence            8886

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.19  E-value=4.7e-12  Score=107.87  Aligned_cols=97  Identities=28%  Similarity=0.654  Sum_probs=75.0

Q ss_pred             CCeecCCCCeeeecCCCCccCCCCC-CC--CCC-CCceeecCCCcccCCCCCCCCCCCC-------------------CC
Q psy9819          40 YGYCKGPPDYSCQCELGWTGVDCSV-NC--LCN-NHSTCVHGIGICDECHDWTTGDHCQ-------------------YC   96 (377)
Q Consensus        40 ~G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~-~~g~C~~~~~~C~~C~~g~~G~~C~-------------------~C   96 (377)
                      ||+|+.  .++|+|++||+|.+|++ .|  .|. .+|+|+. +++| .|++||+|..|+                   .|
T Consensus        43 ~g~C~~--~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~-~~~C-~C~~G~~G~~C~~C~~~~~C~~g~C~~~~~C~C  118 (169)
T 2vj2_A           43 HYACDQ--NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKL-PGDC-RCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLC  118 (169)
T ss_dssp             EEEECS--SCCEEECTTEESTTSCEECCCTTCCTTTEECSS-TTCC-EECTTEESSSSCEECCCTTCSSEECSSTTCCEE
T ss_pred             CCEeCC--CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCC-CCee-ECCCCCCCCCcccCCCCCCCCCCCcCCCCEEeC
Confidence            478975  45899999999999985 34  465 6778875 6889 799999999886                   36


Q ss_pred             CCCcccCCCCC--CCccC-CCCCCCCCcCcccccC---CCcceecCCCCccCCCc
Q psy9819          97 RAGSYGNATTQ--EGCRK-CDCNSHGNSVLGVCDS---ITGECICQDNTQGKNCE  145 (377)
Q Consensus        97 ~~g~~g~~c~~--~~C~~-~~C~~~g~~~~g~C~~---~~g~C~C~~g~~G~~C~  145 (377)
                      ++||+|..|+.  +.|.. .+|.+++     +|..   ..++|.|++||+|.+|+
T Consensus       119 ~~G~~G~~C~~~~~~C~~~~~C~~~g-----~C~~~~~~~~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          119 ETNWGGQLCDKDLNYCGTHQPCLNGG-----TCSNTGPDKYQCSCPEGYSGPNCE  168 (169)
T ss_dssp             CTTEETTTTCEESCHHHHTCCCCTTC-----EEEECSTTCEEEECCTTCCSTTSC
T ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCC-----EEcCCCCCCcEeECCCCCcCcCcC
Confidence            67888888873  55764 5788776     7754   24689999999999886

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.17  E-value=3.1e-11  Score=99.80  Aligned_cols=95  Identities=33%  Similarity=0.761  Sum_probs=70.3

Q ss_pred             CCCCC-CeecCC---CCeeeecCCCCccCCCCC---------------CC---CCCCCceeec---------CCCcccCC
Q psy9819          36 NKCIY-GYCKGP---PDYSCQCELGWTGVDCSV---------------NC---LCNNHSTCVH---------GIGICDEC   84 (377)
Q Consensus        36 ~~C~~-G~C~~~---~~~~C~C~~G~~G~~C~~---------------~C---~C~~~g~C~~---------~~~~C~~C   84 (377)
                      +||++ |+|+..   ++|+|.|++||+|..|+.               +|   +|.++++|+.         ..++| .|
T Consensus         6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C-~C   84 (143)
T 4d90_A            6 NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVC-KC   84 (143)
T ss_dssp             CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEE-EC
T ss_pred             CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEe-EC
Confidence            68976 899863   479999999999999974               23   4888899972         35678 67


Q ss_pred             CCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCCC--cceecCCCCccCCCcc
Q psy9819          85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCER  146 (377)
Q Consensus        85 ~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~~  146 (377)
                      ++||+|.+|+.          +.++|...+|.+++     +|....  ++|.|++||+|.+|+.
T Consensus        85 ~~G~~G~~C~~----------~i~~C~~~~C~~~~-----~C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           85 PRGFNGIHCQH----------NINECEVEPCKNGG-----ICTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             CTTEESTTSCE----------ECCTTTTCCSCTTC-----EEEEETTEEEEECCTTCBSTTSCB
T ss_pred             cCCCcCCCccc----------CCCcCCCCCCCCCC-----EeECCCCCeEeECCCCCccCCcee
Confidence            77777777652          13567666787776     776433  4899999999999974

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.12  E-value=7.8e-11  Score=120.37  Aligned_cols=114  Identities=31%  Similarity=0.740  Sum_probs=84.4

Q ss_pred             CC-CCeecCCCCeeeecC----CCCccCCCCC---CC------CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccC
Q psy9819          38 CI-YGYCKGPPDYSCQCE----LGWTGVDCSV---NC------LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN  103 (377)
Q Consensus        38 C~-~G~C~~~~~~~C~C~----~G~~G~~C~~---~C------~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~  103 (377)
                      |. ||+|+   .++|.|+    +||+|..|+.   .|      .|.++|+|..  +.| .|.+||+|..|+ |+.     
T Consensus       495 Cs~~G~C~---~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C-~C~~Gy~G~~Ce-C~~-----  562 (690)
T 3fcs_B          495 CSQRGECL---CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDC-LCDSDWTGYYCN-CTT-----  562 (690)
T ss_dssp             GGGSEEEC---SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEE-EECTTEESSSSC-EEC-----
T ss_pred             CCCCCEEE---CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--Cee-ECcCCCcCCCCc-cCC-----
Confidence            75 48898   3699999    9999999973   45      3888899976  889 788999888886 221     


Q ss_pred             CCCCCCccC---CCCCCCCCcCcccccCCCcceec-CCCCccCCCccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9819         104 ATTQEGCRK---CDCNSHGNSVLGVCDSITGECIC-QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGL  179 (377)
Q Consensus       104 ~c~~~~C~~---~~C~~~g~~~~g~C~~~~g~C~C-~~g~~G~~C~~C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~  179 (377)
                        ....|..   .+|.++|     +|.  .+.|.| .+||+|.+|+.|+           .|...|...+          
T Consensus       563 --~~~~C~~~~g~~C~~~G-----~C~--~g~C~C~~~Gy~G~~Ce~C~-----------~C~~~C~~~g----------  612 (690)
T 3fcs_B          563 --RTDTCMSSNGLLCSGRG-----KCE--CGSCVCIQPGSYGDTCEKCP-----------TCPDACTFKK----------  612 (690)
T ss_dssp             --CCTTTBCTTSSBTSSSC-----EEE--TTEEECCSTTCBSTTSCBCT-----------TSCCTTTSCC----------
T ss_pred             --CCCcccCCCCCCCCCCC-----EEe--CCEEECCCCCccCCCcCcCC-----------CCCCCCCCCC----------
Confidence              1234443   4577777     886  479999 9999999999764           3434566665          


Q ss_pred             CCcccCCCCCccCCC
Q psy9819         180 GSGLAERNAWEGKDT  194 (377)
Q Consensus       180 g~~~~c~~G~~G~~C  194 (377)
                       .+..|..+|+|..|
T Consensus       613 -~Cv~C~~g~tG~~C  626 (690)
T 3fcs_B          613 -ECVECKKFDRGALH  626 (690)
T ss_dssp             -GGGTTTTTCCSSSS
T ss_pred             -CcccCCCCCccCCC
Confidence             44458899999976

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.09  E-value=2e-12  Score=111.94  Aligned_cols=131  Identities=18%  Similarity=0.433  Sum_probs=89.1

Q ss_pred             CCCCCCCeecCC-CCeeeecCCCCccC---CCCC--CCC-------CCCCceeec-------CCCcccCCCCCCCCCCCC
Q psy9819          35 YNKCIYGYCKGP-PDYSCQCELGWTGV---DCSV--NCL-------CNNHSTCVH-------GIGICDECHDWTTGDHCQ   94 (377)
Q Consensus        35 ~~~C~~G~C~~~-~~~~C~C~~G~~G~---~C~~--~C~-------C~~~g~C~~-------~~~~C~~C~~g~~G~~C~   94 (377)
                      ++||+||+|++. ++|+|.|++||+|.   .|+.  +|.       |.++++|+.       ++++| .|++||+|..++
T Consensus        10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C-~C~~G~~g~~~~   88 (186)
T 1z1y_A           10 DTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXC-GCIEGYTLXEDT   88 (186)
T ss_dssp             TCCCBTEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE-EECTTEEEETTE
T ss_pred             CCCCCCCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC-CCCCCCccCCCC
Confidence            368999999864 48999999999997   6752  343       777788973       45678 577777766541


Q ss_pred             CCCCCcccCCCCCCCccCCCCCCCCCcCccccc----CC--CcceecCCCCcc-----CCCccCCCCccCCCCCCCCCCC
Q psy9819          95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD----SI--TGECICQDNTQG-----KNCERCLPGYYGDPTDGGTCYY  163 (377)
Q Consensus        95 ~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~----~~--~g~C~C~~g~~G-----~~C~~C~~G~~g~~~~~~~C~~  163 (377)
                       |         ..++|...+|.+++     +|.    ..  .+.|.|++||+|     ..|+.=         +...|..
T Consensus        89 -C---------~~d~C~~~~C~~~g-----~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~---------~~~~C~~  144 (186)
T 1z1y_A           89 -C---------VLDVCQYXNCGESG-----ECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT---------GETACQL  144 (186)
T ss_dssp             -E---------EEGGGTTCCCCTTE-----EEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE---------ECCCCCC
T ss_pred             -C---------CCCcCcCCCCCCCC-----EEeeCCcCCCCCceEECCCCCcccCCCCCcceEc---------CCCcccc
Confidence             2         12456666677666     775    43  348999999988     556520         0123443


Q ss_pred             CC-CCCCCCCCCCCCCCCCcc-cCCCCCccCCC
Q psy9819         164 QC-MARGMLTGPGPQGLGSGL-AERNAWEGKDT  194 (377)
Q Consensus       164 ~C-~~~g~~~~~~~~~~g~~~-~c~~G~~G~~C  194 (377)
                      .| ...+    +|.+..++|. .|++||+|..+
T Consensus       145 ~C~~~~~----~C~n~~g~y~C~C~~G~~g~~~  173 (186)
T 1z1y_A          145 XCNTDNE----VCXNVEGVYXCQCMEGFTFDXE  173 (186)
T ss_dssp             CCCTTTE----EEEEETTEEEEEECTTCEEETT
T ss_pred             cccccCc----ceecCCCCeeeECCCCCccCcc
Confidence            45 3333    4566678888 99999999986

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.08  E-value=1.3e-10  Score=95.01  Aligned_cols=80  Identities=26%  Similarity=0.592  Sum_probs=56.2

Q ss_pred             ccCCC---CCCCCCCeecCC----cccCCCCCCCCCCCCC--CCC-CCccCC--------CceEEeCCCCCCCCCC----
Q psy9819         298 IFSCP---DKCPENRTCINN----QCVCPPRRTGPDCQEE--ICP-NECHEF--------LNHGTCDLLLTGVHIT----  355 (377)
Q Consensus       298 ~~~C~---~~C~~~g~C~~g----~C~C~~G~~G~~C~~~--~C~-~~C~~~--------~~~c~C~~g~~G~~C~----  355 (377)
                      +++|.   ++|.++|+|++.    +|.|++||+|..|+++  .|. ++|.++        .++|+|++||+|..|+    
T Consensus         5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~   84 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTD   84 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECC
T ss_pred             cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCC
Confidence            45563   457777777544    6778888888777632  242 344432        2567778888777664    


Q ss_pred             --------CCCeecccccCeeeecCCCeeC
Q psy9819         356 --------HGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       356 --------~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                              ++++|++..++|+|+|++||++
T Consensus        85 ~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G  114 (135)
T 2vj3_A           85 ECASSPCLHNGRCLDKINEFQCECPTGFTG  114 (135)
T ss_dssp             TTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred             cccCCCcCCCCEeECCCCCeEEECCCCCcC
Confidence                    6789999999999999999974

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.04  E-value=2.4e-10  Score=94.41  Aligned_cols=37  Identities=19%  Similarity=0.342  Sum_probs=28.3

Q ss_pred             ceEEeCCCCCCCCC------------CCCCeecccccCeeeecCCCeeC
Q psy9819         341 NHGTCDLLLTGVHI------------THGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       341 ~~c~C~~g~~G~~C------------~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ++|.|++||+|..|            .++++|++..++|+|+|++||++
T Consensus        80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G  128 (143)
T 4d90_A           80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMG  128 (143)
T ss_dssp             EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBS
T ss_pred             eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCcc
Confidence            34556666655555            47899999999999999999974

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=98.98  E-value=4.1e-10  Score=107.42  Aligned_cols=92  Identities=33%  Similarity=0.828  Sum_probs=72.5

Q ss_pred             CCCCCCCce-eecC------CCcccCCCCCCCCCCCCCCCCCcccCCCC------CCCccCCCCCCCCCcCc--------
Q psy9819          65 NCLCNNHST-CVHG------IGICDECHDWTTGDHCQYCRAGSYGNATT------QEGCRKCDCNSHGNSVL--------  123 (377)
Q Consensus        65 ~C~C~~~g~-C~~~------~~~C~~C~~g~~G~~C~~C~~g~~g~~c~------~~~C~~~~C~~~g~~~~--------  123 (377)
                      .|.|++|+. |+..      +++| .|.++++|.+||.|++||+|....      ...|.+|.|++++....        
T Consensus       265 ~C~CnGHA~~C~~~~~~~~~~g~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~  343 (403)
T 2y38_A          265 RCVCHGHADVCDAKDPLDPFRLQC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRR  343 (403)
T ss_dssp             ECCCTTBCSCEEESCTTSTTCEEE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHT
T ss_pred             ccccCCCccccCCCCCCCccceEe-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccc
Confidence            478999985 9732      3679 899999999999999999997532      26899999998874210        


Q ss_pred             -c-----cccCCCccee-cCCCCccCCCccCCCCccCCCCC
Q psy9819         124 -G-----VCDSITGECI-CQDNTQGKNCERCLPGYYGDPTD  157 (377)
Q Consensus       124 -g-----~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~~  157 (377)
                       +     .+...+|+|. |++++.|.+||+|.+||+|++..
T Consensus       344 ~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~  384 (403)
T 2y38_A          344 EASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ  384 (403)
T ss_dssp             TCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTS
T ss_pred             cccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCC
Confidence             0     0123478996 99999999999999999998754

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.94  E-value=6.7e-13  Score=119.38  Aligned_cols=103  Identities=17%  Similarity=0.031  Sum_probs=74.2

Q ss_pred             CCCC-CeecCC-CCeeeecCCCCccCCCCCC--------------------------------C---CCCCCceee--cC
Q psy9819          37 KCIY-GYCKGP-PDYSCQCELGWTGVDCSVN--------------------------------C---LCNNHSTCV--HG   77 (377)
Q Consensus        37 ~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~--------------------------------C---~C~~~g~C~--~~   77 (377)
                      +|.+ |+|++. .+|+|+|++||+|..|++.                                |   +|.++|+|.  ..
T Consensus        39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~  118 (267)
T 4fbr_A           39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT  118 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE
T ss_pred             CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc
Confidence            4655 899863 4899999999999999741                                1   355666665  34


Q ss_pred             CCcccCCCCCCCCCCCCC---------------CCCC---cccCCCCC-CCccCCCCCCCCCcCcccccC--CCcceecC
Q psy9819          78 IGICDECHDWTTGDHCQY---------------CRAG---SYGNATTQ-EGCRKCDCNSHGNSVLGVCDS--ITGECICQ  136 (377)
Q Consensus        78 ~~~C~~C~~g~~G~~C~~---------------C~~g---~~g~~c~~-~~C~~~~C~~~g~~~~g~C~~--~~g~C~C~  136 (377)
                      ++.| .|+++|+|.+|+.               |.++   +.|..++. ..|.+.+|.++|     +|..  .+++|.|+
T Consensus       119 sy~C-~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg-----~C~dg~~~y~C~Cp  192 (267)
T 4fbr_A          119 TYNG-EGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGG-----KTLSGTMTYNGEGP  192 (267)
T ss_dssp             EETT-SCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTT-----SEEEEEEEETTSCC
T ss_pred             cEEe-eCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCC-----EeeCCCCCeEEeCC
Confidence            6789 7999999999971               3322   45666665 334555677777     6753  24689999


Q ss_pred             CCCccCCCc
Q psy9819         137 DNTQGKNCE  145 (377)
Q Consensus       137 ~g~~G~~C~  145 (377)
                      +||+|.+|+
T Consensus       193 ~Gf~G~~c~  201 (267)
T 4fbr_A          193 IGFRGTLTS  201 (267)
T ss_dssp             EEEEEEEEE
T ss_pred             CCccccccc
Confidence            999999998

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.78  E-value=3.5e-09  Score=87.37  Aligned_cols=25  Identities=16%  Similarity=0.282  Sum_probs=22.3

Q ss_pred             CCCCCCeecccccCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .|.++++|++..++|+|+|++||++
T Consensus       105 ~C~~~~~C~n~~g~y~C~C~~Gy~g  129 (143)
T 2bou_A          105 QCDSSTVCFNTVGSYSCRCRPGWKP  129 (143)
T ss_dssp             CCCTTSEEEECSSCEEEECCSSSCB
T ss_pred             CCCCCCEEECCCCCEEeeCCCCccc
Confidence            5778899999999999999999963

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.77  E-value=3e-09  Score=93.66  Aligned_cols=89  Identities=30%  Similarity=0.880  Sum_probs=62.7

Q ss_pred             CCC-CCeecCCCCeeeecCCCCccCCCCCC------------C-------CCCCCceeecCCCcccCCCCCC------CC
Q psy9819          37 KCI-YGYCKGPPDYSCQCELGWTGVDCSVN------------C-------LCNNHSTCVHGIGICDECHDWT------TG   90 (377)
Q Consensus        37 ~C~-~G~C~~~~~~~C~C~~G~~G~~C~~~------------C-------~C~~~g~C~~~~~~C~~C~~g~------~G   90 (377)
                      .|. ||+|+.   +.|.|++||+|..|+.+            |       +|+++|+|+.  ++| .|.++|      +|
T Consensus        97 ~Csg~G~C~~---g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~--g~C-~C~~gw~~~~~~~G  170 (217)
T 2p28_B           97 LCHGKGFLEC---GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQC-LCHTSDVPGKLIYG  170 (217)
T ss_dssp             TTTTSEEEET---TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET--TEE-EECCCCSTTCCEES
T ss_pred             ccCCCceEEC---CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC--Cce-ECCCCCCCcccEEC
Confidence            464 588983   58999999999999831            3       4778889984  679 788884      66


Q ss_pred             CCCCCCCCCcccCCCCCCCccCC---CCCCCCCcCcccccCCCcceecCCCCccCCCcc
Q psy9819          91 DHCQYCRAGSYGNATTQEGCRKC---DCNSHGNSVLGVCDSITGECICQDNTQGKNCER  146 (377)
Q Consensus        91 ~~C~~C~~g~~g~~c~~~~C~~~---~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~  146 (377)
                      .+|+. .         ...|...   +|.++.   +|+|.  .++|.|.+||+|.+|+.
T Consensus       171 ~~Ce~-~---------~~~C~~~~g~~C~~~~---~G~C~--~g~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          171 QYCEC-D---------TINCERYNGQVCGGPG---RGLCF--CGKCRCHPGFEGSACQH  214 (217)
T ss_dssp             TTSCE-E---------SSCSCEETTEETTCTT---TEEEE--TTEEEECTTEESTTSCE
T ss_pred             CCccc-C---------CccCCCCCCCCCCCCC---CcEEe--CCeeECCCCCccCCcCC
Confidence            66641 0         2334432   466651   13887  47999999999999973

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=98.77  E-value=2.4e-09  Score=101.75  Aligned_cols=89  Identities=31%  Similarity=0.734  Sum_probs=69.3

Q ss_pred             CCCCCCce-ee---cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC------CCccCCCCCCCCCcCc-----ccccCCC
Q psy9819          66 CLCNNHST-CV---HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ------EGCRKCDCNSHGNSVL-----GVCDSIT  130 (377)
Q Consensus        66 C~C~~~g~-C~---~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~------~~C~~~~C~~~g~~~~-----g~C~~~~  130 (377)
                      |.|++|+. |.   ...+.| .|+++|+|.+|++|.+||++..+..      ..|.+|.|+.++....     ..|...+
T Consensus       255 C~Cngh~s~c~~~~~~~~~C-~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~  333 (375)
T 4aqt_A          255 CKCNGHASECVKNEFDKLMC-NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG  333 (375)
T ss_dssp             ECCTTSCSCEEECTTSCEEE-CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCC
T ss_pred             ecCCCCCcccCCCCCCCeee-eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCC
Confidence            56777774 43   334567 8999999999999999999987543      5789999988774211     1234457


Q ss_pred             ccee-cCCCCccCCCccCCCCccCCC
Q psy9819         131 GECI-CQDNTQGKNCERCLPGYYGDP  155 (377)
Q Consensus       131 g~C~-C~~g~~G~~C~~C~~G~~g~~  155 (377)
                      |+|. |+++|+|.+|++|.+||++.+
T Consensus       334 G~C~~C~~n~~G~~Ce~C~~Gyyg~~  359 (375)
T 4aqt_A          334 GHCTNCRDNTDGAKCERCRENFFRLG  359 (375)
T ss_dssp             EEECSCTTTEESTTSCEECSSEECCT
T ss_pred             CCCCCCCCCCcCCCCCCCCcCcccCc
Confidence            8995 999999999999999999974

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=98.68  E-value=1.6e-08  Score=85.87  Aligned_cols=105  Identities=21%  Similarity=0.486  Sum_probs=74.9

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc---CC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH---RG  268 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~---~~  268 (377)
                      ..+|.|.|.+       +.+.+|+|+|. .|++    .|..|++.||||..             +++.+|+....   ..
T Consensus        27 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~C~~D~l~i~dg~~-------------~~~~~CG~~~~~~~~~   85 (170)
T 1szb_A           27 DQERRWTLTA-------PPGYRLRLYFT-HFDLELSHLCEYDFVKLSSGAK-------------VLATLCGQESTDTERA   85 (170)
T ss_dssp             SCEEEEEEEC-------CTTEEEEEEEE-EEECCCCTTSCSSEEEEESSSS-------------EEEEECSBTTTTCSSS
T ss_pred             CCcEEEEEEc-------CCCCEEEEEEE-EEEccCCCCCCCCEEEEEeCCc-------------cccccCCCCCCccccC
Confidence            5679999999       55678999887 4554    48899999999743             34778876511   13


Q ss_pred             C--cceecCCCeeEeccCCCCCC----CCCccccc---ccCCCCC------CCCCCeecCC----cccCCCCCC
Q psy9819         269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPDK------CPENRTCINN----QCVCPPRRT  323 (377)
Q Consensus       269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~~------C~~~g~C~~g----~C~C~~G~~  323 (377)
                      |  ..+.+.++.|.|.|.++...    .||.+.+.   +++|...      |++  .|++.    .|.|++||+
T Consensus        86 P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~  157 (170)
T 1szb_A           86 PGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV  157 (170)
T ss_dssp             CTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred             CCCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence            5  67899999999999998753    78988543   4567421      543  56433    577777776

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.64  E-value=8.5e-09  Score=85.02  Aligned_cols=106  Identities=21%  Similarity=0.452  Sum_probs=71.5

Q ss_pred             CCcCCCCCC-CeecCCCCeeeecCCCCcc---------CCCCC--CC------CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819          32 SLCYNKCIY-GYCKGPPDYSCQCELGWTG---------VDCSV--NC------LCNNHSTCV--HGIGICDECHDWTTGD   91 (377)
Q Consensus        32 ~~C~~~C~~-G~C~~~~~~~C~C~~G~~G---------~~C~~--~C------~C~~~g~C~--~~~~~C~~C~~g~~G~   91 (377)
                      ..|+++|.+ |+|++  .|+|.|++||+|         ..|+.  +|      +|.++++|+  .++++| .|++||+|.
T Consensus         3 ~~C~~~C~~~~~C~~--~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C-~C~~Gy~g~   79 (143)
T 2bou_A            3 RGCARWCPQDSSCVN--ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDC-VCSPGYEPV   79 (143)
T ss_dssp             CCCCTTCCTTEEESS--SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEE-EECTTEEET
T ss_pred             CCCcCcCCCCCEEcC--CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEe-ECCCCcccC
Confidence            468899965 89996  489999999998         46742  23      587888997  456789 799999888


Q ss_pred             CCCCCCCCcccCCCC-CCCccC--CCCCCCCCcCcccccCCC--cceecCCCCccCCCc
Q psy9819          92 HCQYCRAGSYGNATT-QEGCRK--CDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCE  145 (377)
Q Consensus        92 ~C~~C~~g~~g~~c~-~~~C~~--~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~  145 (377)
                      .++.=-....+..|. .++|..  .+|.+++     +|....  +.|.|++||+|....
T Consensus        80 ~~~~~~~~~~~~~C~dideC~~~~~~C~~~~-----~C~n~~g~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           80 SGAKTFKNESENTCQDVDECSSGQHQCDSST-----VCFNTVGSYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             TCCSCBSSGGGCCEEECCHHHHTCCCCCTTS-----EEEECSSCEEEECCSSSCBCTTC
T ss_pred             cCccccccCCCCCcCCccCccCcCCCCCCCC-----EEECCCCCEEeeCCCCcccCCCC
Confidence            765211112233333 245653  4576655     775433  478888888887654

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.52  E-value=6.6e-08  Score=73.14  Aligned_cols=74  Identities=18%  Similarity=0.309  Sum_probs=44.7

Q ss_pred             CCCCCCCCcc-cccccCC-CCCCCCCCeecCCcccCCCCCCCCCCC-CCCCCCCccCCCceEEeCCCCCCCCCCCCCeec
Q psy9819         285 QGKPSEGFNA-TYQIFSC-PDKCPENRTCINNQCVCPPRRTGPDCQ-EEICPNECHEFLNHGTCDLLLTGVHITHGRTLH  361 (377)
Q Consensus       285 s~~c~~GF~g-~~~~~~C-~~~C~~~g~C~~g~C~C~~G~~G~~C~-~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~  361 (377)
                      .+.|.+||.+ .+++++| ..+|.+...  ..+|+|++||+  .|+ .++  +.|..             ..|.+|++|+
T Consensus         3 ~C~C~~g~~g~~c~~~~c~~~pC~n~~~--~y~C~C~~G~~--~C~~~~~--~~C~~-------------~pC~ngg~C~   63 (91)
T 1tpg_A            3 QVICRDEKTQMIYQQHQSWLRPVLRSNR--VEYCWCNSGRA--QCHSVPV--KSCSE-------------PRCFNGGTCQ   63 (91)
T ss_dssp             CCCCBCSSSCCBCCSSCEEEEECSSSSC--EEEEECSSSCC--BCCEECE--EECSS-------------CCSCTTCEEE
T ss_pred             eeECCCCCcCCeECCCcccCCccccCCC--CcEeECCCCCc--ccccCcC--CcccC-------------CCCCCCCEee
Confidence            4556667766 4445555 233443310  11567777776  555 221  22221             2377999999


Q ss_pred             ccc--cCeeeecCCCeeC
Q psy9819         362 YQV--DLIRCTCRQVYLI  377 (377)
Q Consensus       362 ~~~--~~~~c~~~~~~~~  377 (377)
                      +.+  ++|+|.|++||++
T Consensus        64 ~~~~~~~~~C~C~~G~~G   81 (91)
T 1tpg_A           64 QALYFSDFVCQCPEGFAG   81 (91)
T ss_dssp             EESSSSCEEEECCTTCBS
T ss_pred             cCCCCCCeEeECCCCCcC
Confidence            998  9999999999974

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=98.51  E-value=5.9e-08  Score=81.35  Aligned_cols=105  Identities=26%  Similarity=0.469  Sum_probs=72.4

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCc----CCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcC---C
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHR---G  268 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~---~  268 (377)
                      ..+|.|.|.+       +.+.+|+|+|. .|+++    |..|++.||||..             +++.+|+...+.   .
T Consensus        20 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~C~~D~l~i~dg~~-------------~~~~~CG~~~~~~~~~   78 (159)
T 1nzi_A           20 EVEKSWDIEV-------PEGYGIHLYFT-HLDIELSENCAYDSVQIISGDT-------------EEGRLCGQRSSNNPHS   78 (159)
T ss_dssp             SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEEC----------------CCEEECSEECCCCSSC
T ss_pred             CCCEEEEEEe-------CCCCEEEEEEe-EEEecCCCCCCCCEEEEEeCCc-------------hhcccCCCCCCCcccC
Confidence            5679999999       55678999987 45544    8899999999743             447788765321   1


Q ss_pred             C--cceecCCCeeEeccCCCCCC----CCCccccc---ccCCCC----CCCCCCeecCC----cccCCCCCC
Q psy9819         269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPD----KCPENRTCINN----QCVCPPRRT  323 (377)
Q Consensus       269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~----~C~~~g~C~~g----~C~C~~G~~  323 (377)
                      |  ..+.+.++.|.|.|.++...    .||.+.+.   +++|..    .|.  ..|.+.    .|.|++||+
T Consensus        79 P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~  148 (159)
T 1nzi_A           79 PIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF  148 (159)
T ss_dssp             CCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred             CcceeEEecCCeEEEEEEecCccCcccccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence            3  46889999999999998654    68988553   457743    243  356432    577777776

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.50  E-value=4.1e-09  Score=90.97  Aligned_cols=91  Identities=19%  Similarity=0.363  Sum_probs=61.7

Q ss_pred             CCCCCCccc----c-cccCCC-----CCCCCCCeecCC---------cccCCCCCCCCCC--CCCCCC-CC------cc-
Q psy9819         287 KPSEGFNAT----Y-QIFSCP-----DKCPENRTCINN---------QCVCPPRRTGPDC--QEEICP-NE------CH-  337 (377)
Q Consensus       287 ~c~~GF~g~----~-~~~~C~-----~~C~~~g~C~~g---------~C~C~~G~~G~~C--~~~~C~-~~------C~-  337 (377)
                      .|.+||.+.    + ++++|.     .+|.++++|++.         +|.|++||+|..+  +++.|. ++      |. 
T Consensus        28 ~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~  107 (186)
T 1z1y_A           28 MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIV  107 (186)
T ss_dssp             EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEE
T ss_pred             ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEee
Confidence            355666653    2 346774     348888888432         5889999988744  233332 22      33 


Q ss_pred             ---CC--CceEEeCCCCCC-----CC------------C-CCCCeecccccCeeeecCCCeeC
Q psy9819         338 ---EF--LNHGTCDLLLTG-----VH------------I-THGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       338 ---~~--~~~c~C~~g~~G-----~~------------C-~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                         +.  .++|.|++||+|     ..            | .++++|++..++|+|+|++||.+
T Consensus       108 ~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g  170 (186)
T 1z1y_A          108 EYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF  170 (186)
T ss_dssp             EEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred             CCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCcc
Confidence               22  357888888887     33            4 56889999999999999999963

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.48  E-value=4.2e-08  Score=74.26  Aligned_cols=78  Identities=21%  Similarity=0.458  Sum_probs=53.3

Q ss_pred             CeeeecCCCCccCCCCCC-C---CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCc
Q psy9819          48 DYSCQCELGWTGVDCSVN-C---LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL  123 (377)
Q Consensus        48 ~~~C~C~~G~~G~~C~~~-C---~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~  123 (377)
                      +|+|.|++||+|..|++. |   +|.+.    ...+.| .|++||+  +|+.         -..++|.+.+|.++|    
T Consensus         1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~----~~~y~C-~C~~G~~--~C~~---------~~~~~C~~~pC~ngg----   60 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQQHQSWLRPVLRS----NRVEYC-WCNSGRA--QCHS---------VPVKSCSEPRCFNGG----   60 (91)
T ss_dssp             CCCCCCBCSSSCCBCCSSCEEEEECSSS----SCEEEE-ECSSSCC--BCCE---------ECEEECSSCCSCTTC----
T ss_pred             CeeeECCCCCcCCeECCCcccCCccccC----CCCcEe-ECCCCCc--cccc---------CcCCcccCCCCCCCC----
Confidence            589999999999999752 2   23222    234667 5777765  4430         012567777888877    


Q ss_pred             ccccC----CCcceecCCCCccCCCcc
Q psy9819         124 GVCDS----ITGECICQDNTQGKNCER  146 (377)
Q Consensus       124 g~C~~----~~g~C~C~~g~~G~~C~~  146 (377)
                       +|..    ....|.|++||+|.+|++
T Consensus        61 -~C~~~~~~~~~~C~C~~G~~G~~Ce~   86 (91)
T 1tpg_A           61 -TCQQALYFSDFVCQCPEGFAGKSCEI   86 (91)
T ss_dssp             -EEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred             -EeecCCCCCCeEeECCCCCcCCcCCc
Confidence             7753    245899999999999973

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.44  E-value=2.1e-08  Score=79.86  Aligned_cols=37  Identities=16%  Similarity=0.225  Sum_probs=27.2

Q ss_pred             ceEEeCCCCC---CCCCC------C----CCeecccccCeeeecCCCeeC
Q psy9819         341 NHGTCDLLLT---GVHIT------H----GRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       341 ~~c~C~~g~~---G~~C~------~----g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ++|.|++||+   |..|+      .    +++|++.+++|+|+|++||++
T Consensus        61 y~C~C~~Gy~~~~g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g  110 (118)
T 1dx5_I           61 ASCECPEGYILDDGFICTDIDECENGGFCSGVCHNLPGTFECICGPDSAL  110 (118)
T ss_dssp             TCEECCTTEEEETTTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSC
T ss_pred             eEeECCCCccCCCCCccccccccCCCCCCcCeEEeCCCCEEEECCCCCcc
Confidence            4556666665   44442      0    689999999999999999974

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=98.42  E-value=9.4e-08  Score=90.76  Aligned_cols=66  Identities=35%  Similarity=0.776  Sum_probs=50.8

Q ss_pred             CCeeeecCCCCccCCCCC----------------------CCCCCCCc-eee---------cCCCcccCCCCCCCCCCCC
Q psy9819          47 PDYSCQCELGWTGVDCSV----------------------NCLCNNHS-TCV---------HGIGICDECHDWTTGDHCQ   94 (377)
Q Consensus        47 ~~~~C~C~~G~~G~~C~~----------------------~C~C~~~g-~C~---------~~~~~C~~C~~g~~G~~C~   94 (377)
                      ..+.|.|.++|+|.+|++                      +|.|+.++ .|.         ..+|+|..|+++|+|.+||
T Consensus       270 ~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce  349 (375)
T 4aqt_A          270 DKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE  349 (375)
T ss_dssp             SCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC
T ss_pred             CCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC
Confidence            467899999999999983                      24566665 343         4578996699999999999


Q ss_pred             CCCCCcccCCCCCCCccCC
Q psy9819          95 YCRAGSYGNATTQEGCRKC  113 (377)
Q Consensus        95 ~C~~g~~g~~c~~~~C~~~  113 (377)
                      .|++||+|.... ..|.+|
T Consensus       350 ~C~~Gyyg~~~~-~~C~pC  367 (375)
T 4aqt_A          350 RCRENFFRLGNT-EACSPA  367 (375)
T ss_dssp             EECSSEECCTTC-SSCEEC
T ss_pred             CCCcCcccCcCC-CCCcCC
Confidence            999999998643 356544

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.41  E-value=1e-07  Score=83.77  Aligned_cols=24  Identities=21%  Similarity=0.530  Sum_probs=12.2

Q ss_pred             CCCCCeecCCcccCCCCCCCCCCC
Q psy9819         305 CPENRTCINNQCVCPPRRTGPDCQ  328 (377)
Q Consensus       305 C~~~g~C~~g~C~C~~G~~G~~C~  328 (377)
                      |+++|+|+.++|.|++||+|.+||
T Consensus        98 Csg~G~C~~g~C~C~~G~~G~~Ce  121 (217)
T 2p28_B           98 CHGKGFLECGICRCDTGYIGKNCE  121 (217)
T ss_dssp             TTTSEEEETTEEEECTTEESTTSC
T ss_pred             cCCCceEECCEEECCCCccCCccc
Confidence            445555544555555555555554

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.40  E-value=6.2e-08  Score=95.28  Aligned_cols=88  Identities=24%  Similarity=0.534  Sum_probs=38.7

Q ss_pred             eEEEecCCCCCcccccccceeeeEeeecCCCcCCCCCCCeecCCCCeeeecCCCCccCCCCC-CC--CCCCCceeecCCC
Q psy9819           3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-NC--LCNNHSTCVHGIG   79 (377)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~C~~G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~~~g~C~~~~~   79 (377)
                      .|||+..|.... .|-.=.............|..+|+||+|+.+  ++|.|++||+|..|++ .|  +|.++|+|+.. +
T Consensus       365 ~I~Ri~~p~~~~-~p~~C~~~~~g~~c~~~~C~~~C~nG~C~~~--~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~-~  440 (463)
T 2wg3_C          365 KLYKIVDPKRPL-MPEECRATVQPAQTLTSECSRLCRNGYCTPT--GKCCCSPGWEGDFCRTAKCEPACRHGGVCVRP-N  440 (463)
T ss_dssp             EEEEEECTTSCS-SCGGGCCCCCCCCCCCCHHHHHCCSEEECTT--SCEEECTTEESTTSCEECC---------------
T ss_pred             cEEEecCccccc-ccccCCCCCcCCCCccccccCCCCCCccCCC--CeECCCCCcCCCcCCcCcCCCCCCCCCEECCC-C
Confidence            588988655432 1110000011112334667778999999964  4899999999999985 46  79999999853 6


Q ss_pred             cccCCCCCCCCCCCCC
Q psy9819          80 ICDECHDWTTGDHCQY   95 (377)
Q Consensus        80 ~C~~C~~g~~G~~C~~   95 (377)
                      +| .|+++|+|.+|+.
T Consensus       441 ~C-~C~~G~~G~~C~~  455 (463)
T 2wg3_C          441 KC-LCKKGYLGPQCEQ  455 (463)
T ss_dssp             ----------------
T ss_pred             EE-ECCCCcccCCCCC
Confidence            89 7888888888863

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=98.32  E-value=1.7e-07  Score=89.71  Aligned_cols=83  Identities=33%  Similarity=0.671  Sum_probs=40.4

Q ss_pred             CCCCCCCc-eeecC--CCcccCCCCCCCCCCCCCCCCCcccCCCC-----------CCCccCCCCCCCCCcCcccccCCC
Q psy9819          65 NCLCNNHS-TCVHG--IGICDECHDWTTGDHCQYCRAGSYGNATT-----------QEGCRKCDCNSHGNSVLGVCDSIT  130 (377)
Q Consensus        65 ~C~C~~~g-~C~~~--~~~C~~C~~g~~G~~C~~C~~g~~g~~c~-----------~~~C~~~~C~~~g~~~~g~C~~~~  130 (377)
                      .|.|++|+ .|...  +++| .|+++|+|.+||.|.++|++..+.           ...|.+|+|..++.    .|+..+
T Consensus       296 ~C~CnGHas~C~~~~g~~~C-~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~----~CD~~t  370 (426)
T 3zyj_B          296 RCKCNLHATVCVYDNSKLTC-ECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN----VCDNEL  370 (426)
T ss_dssp             EECCSSSCSCEEEETTEEEE-CCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------
T ss_pred             cCcCCCchhhcCCCCCCcee-eCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcC----ccccCc
Confidence            47899986 79854  4689 799999999999999999876543           15688888877653    566555


Q ss_pred             ccee----cCCCCccCCCccCCCCccCCCC
Q psy9819         131 GECI----CQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus       131 g~C~----C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      +.|.    |..+.   .| .|++||+|..+
T Consensus       371 ~~C~ngg~C~~~~---~C-~C~~G~~G~~C  396 (426)
T 3zyj_B          371 LHCQNGGTCHNNV---RC-LCPAAYTGILC  396 (426)
T ss_dssp             ------------------------------
T ss_pred             ccCCCCCCcCCCC---CC-cCCCCCcCCCC
Confidence            5554    55544   66 57777777643

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.31  E-value=1.3e-07  Score=75.10  Aligned_cols=94  Identities=30%  Similarity=0.724  Sum_probs=53.9

Q ss_pred             CCCcC-CCCCCCeecCC--CCeeeecCCCCccCCCCC-CC--CCCCC---ceee-cCCCcccCCCCCCCCCCCCCCCCCc
Q psy9819          31 ASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSV-NC--LCNNH---STCV-HGIGICDECHDWTTGDHCQYCRAGS  100 (377)
Q Consensus        31 ~~~C~-~~C~~G~C~~~--~~~~C~C~~G~~G~~C~~-~C--~C~~~---g~C~-~~~~~C~~C~~g~~G~~C~~C~~g~  100 (377)
                      +..|. +||+| +|++.  ++|+|.|++||+|..+++ .|  .|.++   ++|. ...+.| .|++||++..        
T Consensus         4 ideC~~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C-~C~~Gy~~~~--------   73 (118)
T 1dx5_I            4 VDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASC-ECPEGYILDD--------   73 (118)
T ss_dssp             CCGGGGCCCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCE-ECCTTEEEET--------
T ss_pred             cccCCCCCCCC-CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccCCCCeEe-ECCCCccCCC--------
Confidence            34454 58987 99875  589999999999985432 12  24333   3454 234556 4555554100        


Q ss_pred             ccCCCC-CCCccC-CCCCCCCCcCcccccCC--CcceecCCCCccC
Q psy9819         101 YGNATT-QEGCRK-CDCNSHGNSVLGVCDSI--TGECICQDNTQGK  142 (377)
Q Consensus       101 ~g~~c~-~~~C~~-~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~  142 (377)
                       |..|. .++|.. .+|  ++     +|...  .+.|.|++||+|.
T Consensus        74 -g~~C~dideC~~~~~C--~~-----~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           74 -GFICTDIDECENGGFC--SG-----VCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             -TTEEEECCHHHHCSSC--SS-----EEEECSSSEEEEECSSSSCE
T ss_pred             -CCccccccccCCCCCC--cC-----eEEeCCCCEEEECCCCCccC
Confidence             33332 245554 445  22     66543  3588888888763

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=98.31  E-value=5.3e-07  Score=86.03  Aligned_cols=58  Identities=31%  Similarity=0.830  Sum_probs=47.0

Q ss_pred             eeeecCCCCccCCCCC----------------------CCCCCCCce-ee------------------cCCCcccCCCCC
Q psy9819          49 YSCQCELGWTGVDCSV----------------------NCLCNNHST-CV------------------HGIGICDECHDW   87 (377)
Q Consensus        49 ~~C~C~~G~~G~~C~~----------------------~C~C~~~g~-C~------------------~~~~~C~~C~~g   87 (377)
                      .+|.|..+++|..|+.                      +|.|++|+. |.                  ..+++|+.|.++
T Consensus       286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n  365 (403)
T 2y38_A          286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH  365 (403)
T ss_dssp             EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred             eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence            4688888888887772                      468888874 83                  347899669999


Q ss_pred             CCCCCCCCCCCCcccCCCC
Q psy9819          88 TTGDHCQYCRAGSYGNATT  106 (377)
Q Consensus        88 ~~G~~C~~C~~g~~g~~c~  106 (377)
                      ++|.+||.|++||+|....
T Consensus       366 t~G~~CErC~~GYyg~p~~  384 (403)
T 2y38_A          366 TTGINCERCLPGFFRAPDQ  384 (403)
T ss_dssp             EESTTSCEECTTCEECTTS
T ss_pred             CcCCCCCcCCCCccCCCCC
Confidence            9999999999999998654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.31  E-value=3.1e-07  Score=72.49  Aligned_cols=64  Identities=30%  Similarity=0.529  Sum_probs=45.5

Q ss_pred             CCCCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCe
Q psy9819         300 SCPDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY  375 (377)
Q Consensus       300 ~C~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~  375 (377)
                      +|...|.++|+|++.    +|.|++||+|..|+..+-.+.|....           ..|.+  +|++.+++|+|+|++||
T Consensus        17 ~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~-----------~~C~~--~C~n~~g~y~C~C~~G~   83 (114)
T 1aut_L           17 PCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-----------GGCTH--YCLEEVGWRRCSCAPGY   83 (114)
T ss_dssp             SSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGG-----------GGCSS--EEEECSSSEEEECCTTE
T ss_pred             cccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCC-----------CCCCC--EeECCCCCEEeECCCCe
Confidence            344559999999765    79999999999998653223343211           12333  78888888888888888


Q ss_pred             e
Q psy9819         376 L  376 (377)
Q Consensus       376 ~  376 (377)
                      +
T Consensus        84 ~   84 (114)
T 1aut_L           84 K   84 (114)
T ss_dssp             E
T ss_pred             e
Confidence            6

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.25  E-value=6.3e-07  Score=66.28  Aligned_cols=64  Identities=30%  Similarity=0.699  Sum_probs=47.9

Q ss_pred             cccCCC--CCCCCCCeecCC----cccCCCCCC--CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCee
Q psy9819         297 QIFSCP--DKCPENRTCINN----QCVCPPRRT--GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR  368 (377)
Q Consensus       297 ~~~~C~--~~C~~~g~C~~g----~C~C~~G~~--G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~  368 (377)
                      ++++|.  ++|.+ |+|++.    +|.|++||+  |..|+..   +.|..            ...|.+| +|++..++|+
T Consensus         4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di---deC~~------------~~~C~~~-~C~n~~g~y~   66 (82)
T 1emn_A            4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT---DECSV------------GNPCGNG-TCKNVIGGFE   66 (82)
T ss_dssp             CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC---CGGGT------------CCTTSSS-CEEECSSSEE
T ss_pred             ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc---ccccC------------CCCCCCC-EeECCCCCEE
Confidence            356673  56875 899764    799999997  8888532   34431            2357775 9999999999


Q ss_pred             eecCCCeeC
Q psy9819         369 CTCRQVYLI  377 (377)
Q Consensus       369 c~~~~~~~~  377 (377)
                      |+|++||++
T Consensus        67 C~C~~G~~g   75 (82)
T 1emn_A           67 CTCEEGFEP   75 (82)
T ss_dssp             ECCSSSSCC
T ss_pred             eECCCCeEe
Confidence            999999974

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.23  E-value=9.9e-08  Score=80.30  Aligned_cols=105  Identities=26%  Similarity=0.634  Sum_probs=66.0

Q ss_pred             CCCcC--CCCCCCeecC-CCCeeeecCCCCc----cCCCCCC----C-----CC--CCCceeecC------CCcccCCCC
Q psy9819          31 ASLCY--NKCIYGYCKG-PPDYSCQCELGWT----GVDCSVN----C-----LC--NNHSTCVHG------IGICDECHD   86 (377)
Q Consensus        31 ~~~C~--~~C~~G~C~~-~~~~~C~C~~G~~----G~~C~~~----C-----~C--~~~g~C~~~------~~~C~~C~~   86 (377)
                      +..|.  +||.+|+|++ +++|+|.|++||+    |..|+..    |     +|  .++++|+..      .+.| .|++
T Consensus         3 ideC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C-~C~~   81 (162)
T 1uzk_A            3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC-CCSL   81 (162)
T ss_dssp             CCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH-HTTT
T ss_pred             cccCCCCCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee-eCCC
Confidence            44553  6898899986 4589999999999    7888631    3     12  346678632      5789 7999


Q ss_pred             CCC-CCCCCCC------------CC--CcccCCC-----CCCCccC--CCCCCCCCcCcccccCC--CcceecCCCCccC
Q psy9819          87 WTT-GDHCQYC------------RA--GSYGNAT-----TQEGCRK--CDCNSHGNSVLGVCDSI--TGECICQDNTQGK  142 (377)
Q Consensus        87 g~~-G~~C~~C------------~~--g~~g~~c-----~~~~C~~--~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~  142 (377)
                      ||. |..|+.|            ++  ||.+...     +.++|..  .+|.+ +     +|...  .++|.|++||+|.
T Consensus        82 G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g-----~C~n~~gsy~C~C~~Gy~g~  155 (162)
T 1uzk_A           82 GKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-G-----KCINTFGSFQCRCPTGYYLN  155 (162)
T ss_dssp             CCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-S-----EEEECSSCEEEECCTTCCBC
T ss_pred             CCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-C-----EeEcCCCCEEeeCCCCccCC
Confidence            998 7778754            44  8888632     1255653  23542 3     56433  3477777777764

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.19  E-value=7.5e-07  Score=89.90  Aligned_cols=108  Identities=27%  Similarity=0.614  Sum_probs=71.0

Q ss_pred             CCcC-CCCCC-CeecCCC--Ceee-ecCCCCcc--CCCCC--CC---C--CCCCc---eee--cCCCcccC-CCCCCCCC
Q psy9819          32 SLCY-NKCIY-GYCKGPP--DYSC-QCELGWTG--VDCSV--NC---L--CNNHS---TCV--HGIGICDE-CHDWTTGD   91 (377)
Q Consensus        32 ~~C~-~~C~~-G~C~~~~--~~~C-~C~~G~~G--~~C~~--~C---~--C~~~g---~C~--~~~~~C~~-C~~g~~G~   91 (377)
                      ..|. +||.+ ++|++..  +|+| .|++||+|  ..|+.  +|   +  |.+++   +|.  ..+++| . |++||+|.
T Consensus         4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C-~~C~~Gy~G~   82 (634)
T 1yo8_A            4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHC-LPCPPRYRGN   82 (634)
T ss_dssp             CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEE-CCCCTTEEEC
T ss_pred             cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceec-ccCCCCcccC
Confidence            3454 68987 7898754  5999 99999998  78874  45   3  88877   887  456788 6 88888887


Q ss_pred             CCCCCC---CCcccCCCC-CCCccC--CCCCCCCCcCcccccCC------CcceecCCCCcc--CCCc
Q psy9819          92 HCQYCR---AGSYGNATT-QEGCRK--CDCNSHGNSVLGVCDSI------TGECICQDNTQG--KNCE  145 (377)
Q Consensus        92 ~C~~C~---~g~~g~~c~-~~~C~~--~~C~~~g~~~~g~C~~~------~g~C~C~~g~~G--~~C~  145 (377)
                      .|+.=.   ...-+..|. .++|..  .+|.+++     +|...      .++|.|++||.|  ..|+
T Consensus        83 ~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~-----~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A           83 QPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHA-----ECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             CCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTE-----EEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             ccccccccccccCCCcccccccccCCCcccccCc-----cccccccccccceeeeccCCccccCcccc
Confidence            764100   000111222 245553  3566655     77543      358999999998  6786

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.18  E-value=1.5e-07  Score=92.63  Aligned_cols=70  Identities=19%  Similarity=0.417  Sum_probs=38.4

Q ss_pred             CCCCCCCcc-cccccCCCCCCCCCCeecC-CcccCCCCCCCCCCCCCCCCCCccCC-----CceEEeCCCCCCCCCCC
Q psy9819         286 GKPSEGFNA-TYQIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEF-----LNHGTCDLLLTGVHITH  356 (377)
Q Consensus       286 ~~c~~GF~g-~~~~~~C~~~C~~~g~C~~-g~C~C~~G~~G~~C~~~~C~~~C~~~-----~~~c~C~~g~~G~~C~~  356 (377)
                      ..|..||.+ .+..+.|..+|.| |+|++ ++|.|++||+|.+|++..|..+|.++     .++|.|.+||+|.+|+.
T Consensus       379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~  455 (463)
T 2wg3_C          379 EECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQ  455 (463)
T ss_dssp             GGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEECC-----------------------------
T ss_pred             ccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCCCEEECCCCcccCCCCC
Confidence            356678888 6777788767997 89976 69999999999999988887788765     27888999999999984

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.17  E-value=6.9e-07  Score=73.73  Aligned_cols=64  Identities=19%  Similarity=0.457  Sum_probs=43.5

Q ss_pred             cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCee-cccccCeeee
Q psy9819         297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL-HYQVDLIRCT  370 (377)
Q Consensus       297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~-~~~~~~~~c~  370 (377)
                      ++++| +++|.++|+|++.    +|.|++||+|..|+..   +.|....           ..|.+  +| ++.+++|+|.
T Consensus        47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~---deC~~~~-----------~~C~~--~C~~n~~g~y~C~  110 (146)
T 1x7a_L           47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD---ATCNIKN-----------GRCKQ--FCKTGADSKVLCS  110 (146)
T ss_dssp             ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE---CCTTSGG-----------GSCSS--BCCCCSSSCCCCB
T ss_pred             CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC---ccccCCC-----------CCCcC--CCCCCCCCCEEeE
Confidence            56778 5679999999654    7999999999999864   3343211           12444  67 6777777777


Q ss_pred             cCCCee
Q psy9819         371 CRQVYL  376 (377)
Q Consensus       371 ~~~~~~  376 (377)
                      |++||+
T Consensus       111 C~~Gy~  116 (146)
T 1x7a_L          111 CTTGYR  116 (146)
T ss_dssp             CCTTEE
T ss_pred             cCCCcE
Confidence            777775

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1

Probab=98.14  E-value=8.7e-07  Score=69.85  Aligned_cols=82  Identities=24%  Similarity=0.501  Sum_probs=67.3

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK  275 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~  275 (377)
                      ..+|.|.|.+       +++.+|.|+|. .++++|..|++.||||..          .+++++.+|+..    |..+.+.
T Consensus        28 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~i~dg~~----------~~~~~~~~CG~~----p~~~~S~   85 (114)
T 1sfp_A           28 KTNCVWTIQM-------PPEYHVRVSIQ-YLQLNCNKESLEIIDGLP----------GSPVLGKICEGS----LMDYRSS   85 (114)
T ss_dssp             CSEEEEEEEC-------CTTCEEEEEEE-EEECCTTTEEEEEESSST----------TSCEEEEESEEE----EEEEECS
T ss_pred             CCCEEEEEEe-------CCCCEEEEEEe-eeeeecCCCEEEEEcCCC----------CCcceeEecCcC----CCCEEec
Confidence            5679999999       56779999998 788899999999999864          145778899764    5678889


Q ss_pred             CCeeEeccCCCCCC--CCCccccccc
Q psy9819         276 SGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       276 sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                      ++.+.|.|.++...  .||.+.|...
T Consensus        86 ~n~l~v~F~Sd~~~~~~GF~~~y~~~  111 (114)
T 1sfp_A           86 GSIMTVKYIREPEHPASFYEVLYFQD  111 (114)
T ss_dssp             SSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred             CCeEEEEEEECCCCCCCCEEEEEEEE
Confidence            99999999988654  8999877543

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=98.14  E-value=7.5e-07  Score=69.65  Aligned_cols=80  Identities=25%  Similarity=0.542  Sum_probs=65.7

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK  275 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~  275 (377)
                      ..+|.|.|.+       +++.+|.|+|. .++++|..|++.||||...          +++++.+|+..    |..+.+ 
T Consensus        24 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~I~dg~~~----------~~~~~~~CG~~----p~~~~S-   80 (109)
T 1spp_A           24 KTECVWTLQV-------DPKYKLLVSIP-TLNLTCGKEYVEVLEGAPG----------SKSLGKFCEGL----SILNRG-   80 (109)
T ss_dssp             CSEEEEEEEC-------CTTSEEEEEEE-EEECCTTTEEEEEESSSTT----------SCEEEEESEEE----EEEEEE-
T ss_pred             CCcEEEEEEc-------CCCCEEEEEEe-eeeccCCCCEEEEEeCCCC----------CchhhhhhCCC----CCCEEE-
Confidence            5679999999       56779999998 8888999999999998641          35778899764    567888 


Q ss_pred             CCeeEeccCCCCCC--CCCcccccc
Q psy9819         276 SGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       276 sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      ++.+.|.|.++...  .||.+.|..
T Consensus        81 ~n~l~v~F~Sd~~~~~~GF~~~y~~  105 (109)
T 1spp_A           81 SSGMTVKYKRDSGHPASPYEIIFLR  105 (109)
T ss_dssp             CTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred             CCEEEEEEEeCCCCCCCCEEEEEEE
Confidence            89999999988654  999987654

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.13  E-value=2.6e-07  Score=76.37  Aligned_cols=79  Identities=19%  Similarity=0.373  Sum_probs=52.6

Q ss_pred             cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC----------------CCC---CCc------cCC-------
Q psy9819         297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE----------------ICP---NEC------HEF-------  339 (377)
Q Consensus       297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~----------------~C~---~~C------~~~-------  339 (377)
                      ++++| .++|.+ |+|++.    +|.|++||+|..+...                .|.   +.|      .+.       
T Consensus         3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~   81 (147)
T 2w86_A            3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGS   81 (147)
T ss_dssp             CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETT
T ss_pred             cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCC
Confidence            45667 356875 699654    7999999987644210                010   111      111       


Q ss_pred             -----CceEEeCCCCC---CCC-------------CCCCCeecccccCeeeecCCCeeC
Q psy9819         340 -----LNHGTCDLLLT---GVH-------------ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       340 -----~~~c~C~~g~~---G~~-------------C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                           .+.|+|.+||+   |..             |.+| +|++.+++|+|+|++||++
T Consensus        82 ~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g-~C~n~~g~y~C~C~~Gy~g  139 (147)
T 2w86_A           82 PCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNG-LCVNTRGSFKCQCPSGMTL  139 (147)
T ss_dssp             TTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSS-EEEEETTEEEEECCTTCCB
T ss_pred             CcccCCCcccCCCccccCCCCccCccccccCCCCCCCCC-EEECCCCCEEeeCCCCCcc
Confidence                 14568999994   764             4455 9999999999999999973

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}

Probab=98.12  E-value=3.2e-06  Score=69.93  Aligned_cols=85  Identities=24%  Similarity=0.468  Sum_probs=67.0

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ..+|.|.|.+       +.+.+|+|+|. .|++    .|..|++.||||....         +++++.+|+..   .|..
T Consensus        30 n~~C~W~I~~-------~~g~~I~L~F~-~f~le~~~~C~~D~l~I~dg~~~~---------~~~~~~~CG~~---~p~~   89 (149)
T 2wno_A           30 NQICYWHIRL-------KYGQRIHLSFL-DFDLEDDPGCLADYVEIYDSYDDV---------HGFVGRYCGDE---LPDD   89 (149)
T ss_dssp             TCEEEEEEEC-------CTTCEEEEEEE-EEECCCCTTCCSSEEEEESSSSSS---------SSEEEEECSSS---CCCC
T ss_pred             CCEEEEEEEE-------CCCCEEEEEEE-EEEecCCCCCCCCEEEEecCCCCC---------cceeeeEcCCC---CCCC
Confidence            5679999999       55678999987 5554    4889999999986522         46778999875   3567


Q ss_pred             eecCCCeeEeccCCCCCC--CCCcccccccC
Q psy9819         272 LEAKSGVMTIHYKQGKPS--EGFNATYQIFS  300 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~~~  300 (377)
                      +.+.++.|.|.|.++...  .||.+.|....
T Consensus        90 ~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~  120 (149)
T 2wno_A           90 IISTGNVMTLKFLSDASVTAGGFQIKYVAMD  120 (149)
T ss_dssp             EECSSSEEEEEEECCSSCCCCEEEEEEEEEC
T ss_pred             EEEeCCEEEEEEEECCCCCCCCEEEEEEEEC
Confidence            899999999999998754  89999776543

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.08  E-value=1.6e-06  Score=87.50  Aligned_cols=87  Identities=21%  Similarity=0.433  Sum_probs=51.9

Q ss_pred             CC-CCCCCCcc---cc-cccCCC-CC--CCCCC---eecCC----ccc-CCCCCCCCCCCCCC---C---CCCccCCCce
Q psy9819         285 QG-KPSEGFNA---TY-QIFSCP-DK--CPENR---TCINN----QCV-CPPRRTGPDCQEEI---C---PNECHEFLNH  342 (377)
Q Consensus       285 s~-~c~~GF~g---~~-~~~~C~-~~--C~~~g---~C~~g----~C~-C~~G~~G~~C~~~~---C---~~~C~~~~~~  342 (377)
                      .+ .|..||.+   .+ .+++|. .+  |.+++   +|++.    +|. |++||+|..|+...   +   ...|...   
T Consensus        26 ~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di---  102 (634)
T 1yo8_A           26 SCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE---  102 (634)
T ss_dssp             EECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEEC---
T ss_pred             ECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCccccc---
Confidence            45 67777776   23 245663 33  77777   77543    577 77777777765100   0   0011100   


Q ss_pred             EEeCCCCCCCCCCCCCeecccc----cCeeeecCCCee
Q psy9819         343 GTCDLLLTGVHITHGRTLHYQV----DLIRCTCRQVYL  376 (377)
Q Consensus       343 c~C~~g~~G~~C~~g~~~~~~~----~~~~c~~~~~~~  376 (377)
                      =.|..+  -..|.++++|++..    ++|+|+|++||.
T Consensus       103 deC~~~--~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~  138 (634)
T 1yo8_A          103 NPCKDK--THNCHKHAECIYLGHFSDPMYKCECQTGYA  138 (634)
T ss_dssp             CTTTTT--CCCCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred             ccccCC--CcccccCccccccccccccceeeeccCCcc
Confidence            012211  13577889999998    999999999996

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=98.07  E-value=1.3e-06  Score=68.99  Aligned_cols=81  Identities=22%  Similarity=0.441  Sum_probs=66.8

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK  275 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~  275 (377)
                      ..+|.|.|.+       +++.+|.|+|. .++++|..|++.||||...          +++++.+|+..    |..+.+.
T Consensus        27 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~i~dg~~~----------~~~~~~~CG~~----p~~~~S~   84 (116)
T 1spp_B           27 KNLCTWTILM-------KPDQKVRMAIP-YLNLACGKEYVEVFDGLLS----------GPSYGKLCAGA----AIVFLST   84 (116)
T ss_dssp             CSEEEEEEEC-------CTTCEEEEEEE-EEECCBTTEEEEEESSSTT----------SCEEEEESEEE----EEEEECS
T ss_pred             CCCEEEEEEe-------CCCCEEEEEEe-eCcccCCCCEEEEEcCCCC----------CcccccccCcC----CCCEEec
Confidence            5679999999       56779999998 8888999999999998641          45778899764    5678899


Q ss_pred             CCeeEeccCCCCCC--CCCcccccc
Q psy9819         276 SGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       276 sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      ++.|.|.|.++...  .||.+.+..
T Consensus        85 ~n~l~v~F~Sd~~~~~~GF~~~y~~  109 (116)
T 1spp_B           85 ANTMTIKYNRISGNSSSPFLIYFYG  109 (116)
T ss_dssp             SSEEEEEEEESSCSCCCCCEEEEEE
T ss_pred             CCEEEEEEEECCCCCCCCEEEEEEE
Confidence            99999999988654  899987654

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.07  E-value=1.6e-07  Score=77.63  Aligned_cols=34  Identities=29%  Similarity=0.621  Sum_probs=27.1

Q ss_pred             CCCcC-CCCCCCeecC-CCCeeeecCCCCccCCCCC
Q psy9819          31 ASLCY-NKCIYGYCKG-PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        31 ~~~C~-~~C~~G~C~~-~~~~~C~C~~G~~G~~C~~   64 (377)
                      +..|. +||+||+|++ +++|+|.|++||+|..+..
T Consensus         4 ideC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~   39 (147)
T 2w86_A            4 IDECESSPCINGVCKNSPGSFICECSSESTLDPTKT   39 (147)
T ss_dssp             CCGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSS
T ss_pred             CccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCC
Confidence            44554 6899999986 4589999999999987654

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.04  E-value=1.1e-06  Score=75.74  Aligned_cols=73  Identities=18%  Similarity=0.383  Sum_probs=16.6

Q ss_pred             CCCccc-ccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccc
Q psy9819         290 EGFNAT-YQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ  363 (377)
Q Consensus       290 ~GF~g~-~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~  363 (377)
                      .+|+.. .++++| .++|.++|+|++.    .|.|++||+|..|+..+ .+.|....           ..|.+  +|++.
T Consensus        33 ~~fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i-~deC~~~~-----------~~C~~--~C~n~   98 (195)
T 1nfu_B           33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT-RKLCSLDN-----------GDCDQ--FCHEE   98 (195)
T ss_dssp             -------------------------------------------------CCGGGTGG-----------GGCSS--EEEEE
T ss_pred             ccccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccc-cccccCCC-----------CCCCC--EeECC
Confidence            456653 356788 5679999999764    79999999999998642 02233210           12344  67777


Q ss_pred             ccCeeeecCCCee
Q psy9819         364 VDLIRCTCRQVYL  376 (377)
Q Consensus       364 ~~~~~c~~~~~~~  376 (377)
                      .++|+|.|++||+
T Consensus        99 ~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           99 QNSVVCSCARGYT  111 (195)
T ss_dssp             TTEEEEECCTTEE
T ss_pred             CCCeEEECCCCce
Confidence            7777777777775

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.99  E-value=9.5e-06  Score=75.64  Aligned_cols=66  Identities=27%  Similarity=0.575  Sum_probs=47.9

Q ss_pred             cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeec
Q psy9819         297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTC  371 (377)
Q Consensus       297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~  371 (377)
                      ++++| .++|.++|+|++.    +|.|++||+|..|+.++  +.|...          .-..|.+  +|++..++|+|+|
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~--~eC~~~----------~~~~C~~--~C~~~~g~~~C~C   69 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK--NECHPE----------RTDGCQH--FCLPGQESYTCSC   69 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS--SSCCTT----------CTTSCSS--EEECCSSSCEEEC
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCc--ccCCCC----------CCCCCcC--ccccCCCeeEEec
Confidence            35677 4669999999764    79999999999998543  444331          0134666  8888888888888


Q ss_pred             CCCee
Q psy9819         372 RQVYL  376 (377)
Q Consensus       372 ~~~~~  376 (377)
                      +.||.
T Consensus        70 ~~g~~   74 (317)
T 3h5c_B           70 AQGYR   74 (317)
T ss_dssp             CTTEE
T ss_pred             ccccc
Confidence            88886

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.98  E-value=1.8e-06  Score=70.13  Aligned_cols=73  Identities=18%  Similarity=0.374  Sum_probs=17.0

Q ss_pred             CCCcc-cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccc
Q psy9819         290 EGFNA-TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ  363 (377)
Q Consensus       290 ~GF~g-~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~  363 (377)
                      .+|.. -.+++.| +++|.++|+|++.    +|.|++||+|..|+..+ ++.|....           ..|.+  +|++.
T Consensus        33 ~~~~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i-~d~C~~~~-----------~~C~~--~C~~~   98 (134)
T 2vh0_B           33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT-RKLCSLDN-----------GDCDQ--FCHEE   98 (134)
T ss_dssp             -------------------------------------------------CCGGGTGG-----------GGCSS--EEEEE
T ss_pred             ccccccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCC-CCccccCC-----------CCCCC--EeECC
Confidence            34554 3356778 4679999999654    79999999999998632 12233210           12444  67777


Q ss_pred             ccCeeeecCCCee
Q psy9819         364 VDLIRCTCRQVYL  376 (377)
Q Consensus       364 ~~~~~c~~~~~~~  376 (377)
                      .++|+|.|++||+
T Consensus        99 ~g~y~C~C~~Gy~  111 (134)
T 2vh0_B           99 QNSVVCSCARGYT  111 (134)
T ss_dssp             TTEEEEECCTTEE
T ss_pred             CCCEEEECCCCcE
Confidence            7777777777775

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.98  E-value=2.1e-06  Score=70.46  Aligned_cols=68  Identities=16%  Similarity=0.384  Sum_probs=45.3

Q ss_pred             cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccccc-Ceeee
Q psy9819         297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD-LIRCT  370 (377)
Q Consensus       297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~-~~~c~  370 (377)
                      ++++| +++|.++|+|++.    +|.|++||+|..|+..+  +.|..    |.|..    ..|.+  +|++..+ +|+|.
T Consensus        46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~--~~c~~----c~~~~----~~C~~--~C~~~~g~~y~C~  113 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK--DDQLI----CVNEN----GGCEQ--YCSDHTGTKRSCR  113 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEG--GGCCS----TTTGG----GGCSS--EEECCTTSCCEEE
T ss_pred             ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCc--ccccc----ccCCC----CCccC--EeECCCCCCEEEE
Confidence            45678 4679999999654    79999999999998632  11110    00100    11333  7787777 88888


Q ss_pred             cCCCee
Q psy9819         371 CRQVYL  376 (377)
Q Consensus       371 ~~~~~~  376 (377)
                      |++||+
T Consensus       114 C~~Gy~  119 (142)
T 2c4f_L          114 CHEGYS  119 (142)
T ss_dssp             CCTTEE
T ss_pred             CCCCce
Confidence            888886

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.96  E-value=2.1e-06  Score=70.51  Aligned_cols=64  Identities=30%  Similarity=0.796  Sum_probs=47.8

Q ss_pred             cCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC---C---CCCCCCc---eee--cC-CCcccCCCCCCC----C
Q psy9819          30 NASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---N---CLCNNHS---TCV--HG-IGICDECHDWTT----G   90 (377)
Q Consensus        30 ~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~---C~C~~~g---~C~--~~-~~~C~~C~~g~~----G   90 (377)
                      .+..|. +||+| |+|++. ++|+|.|++||+|..|+.   +   |++.+++   +|+  .+ +++| .|++||+    |
T Consensus        46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C-~C~~Gy~l~~dG  124 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSC-RCHEGYSLLADG  124 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEE-ECCTTEEECTTS
T ss_pred             ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEE-ECCCCceECCCC
Confidence            455675 68988 899864 489999999999999985   2   5666666   887  34 6788 6777777    6


Q ss_pred             CCCC
Q psy9819          91 DHCQ   94 (377)
Q Consensus        91 ~~C~   94 (377)
                      .+|+
T Consensus       125 ~~C~  128 (142)
T 2c4f_L          125 VSCT  128 (142)
T ss_dssp             SCEE
T ss_pred             CCCC
Confidence            6664

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.96  E-value=2.4e-06  Score=81.84  Aligned_cols=87  Identities=22%  Similarity=0.440  Sum_probs=24.8

Q ss_pred             C-CeecC-CCCeeeecCCCCccCCCCCCC-------CCCCCceee---cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819          40 Y-GYCKG-PPDYSCQCELGWTGVDCSVNC-------LCNNHSTCV---HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ  107 (377)
Q Consensus        40 ~-G~C~~-~~~~~C~C~~G~~G~~C~~~C-------~C~~~g~C~---~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~  107 (377)
                      | ..|.. .++++|.|+++|+|..|+. |       ++..+..+-   .....|..|.-++.|..            |+.
T Consensus       302 Has~C~~~~g~~~C~C~~~ttG~~CE~-C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~------------CD~  368 (426)
T 3zyj_B          302 HATVCVYDNSKLTCECEHNTTGPDCGK-CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNV------------CDN  368 (426)
T ss_dssp             SCSCEEEETTEEEECCCTTEESSSSCE-ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------
T ss_pred             chhhcCCCCCCceeeCCCCCcCCCccc-cccccccCcccCCcccccCCCCCCcccCCCCCCCcCc------------ccc
Confidence            5 46874 3357999999999999994 2       122111110   11223322333333333            332


Q ss_pred             CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCC
Q psy9819         108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL  148 (377)
Q Consensus       108 ~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~  148 (377)
                         ...+|.++|     +|.... .|.|++||.|..|+.|.
T Consensus       369 ---~t~~C~ngg-----~C~~~~-~C~C~~G~~G~~Ce~c~  400 (426)
T 3zyj_B          369 ---ELLHCQNGG-----TCHNNV-RCLCPAAYTGILCEKLR  400 (426)
T ss_dssp             -----------------------------------------
T ss_pred             ---CcccCCCCC-----CcCCCC-CCcCCCCCcCCCCcCCC
Confidence               112577766     776544 89999999999998543

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.95  E-value=6.5e-06  Score=55.51  Aligned_cols=36  Identities=28%  Similarity=0.646  Sum_probs=28.8

Q ss_pred             ecCCCcC-CCCCC-Ceec------CCCCeeeecCCCCccCCCCC
Q psy9819          29 FNASLCY-NKCIY-GYCK------GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        29 ~~~~~C~-~~C~~-G~C~------~~~~~~C~C~~G~~G~~C~~   64 (377)
                      .+++.|. +||+| |+|.      ....|+|.|++||+|..|+.
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~   49 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN   49 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence            3556676 69999 8993      24589999999999999985

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.91  E-value=4.4e-06  Score=54.25  Aligned_cols=29  Identities=38%  Similarity=0.905  Sum_probs=25.2

Q ss_pred             CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      +||+||+|..   .++|+|.|++||+|.+|+.
T Consensus        12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCCCCCEeeccCCCCCEEEECCCCCccCCCCc
Confidence            5999999984   2479999999999999985

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A

Probab=97.90  E-value=1.9e-05  Score=61.99  Aligned_cols=79  Identities=23%  Similarity=0.500  Sum_probs=60.7

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY  269 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p  269 (377)
                      ..+|.|.|.+       +.+.+|.|+|.+.+++      .|..|++.|+||..             .++.+|+..   .|
T Consensus        28 ~~~C~w~I~~-------~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~~-------------~~~~~CG~~---~p   84 (115)
T 3poj_A           28 SSECSYTIDL-------EEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGSK-------------VWGPFCGEK---SP   84 (115)
T ss_dssp             TCEEEEEEEC-------CTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETTE-------------EEEEECBSS---CC
T ss_pred             CCeEEEEEEc-------CCCCEEEEEEecceecccCCCCCCCCeEEEEEcCCc-------------ccccCcCCC---CC
Confidence            5679999999       5567889988733554      58899999999743             346788765   35


Q ss_pred             cceecCCCeeEeccCCCCCC--CCCccccc
Q psy9819         270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQ  297 (377)
Q Consensus       270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~  297 (377)
                      ..+.+.++.+.|.|.++...  .||.+.|.
T Consensus        85 ~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~  114 (115)
T 3poj_A           85 EPISTQSHSIQILFRSDNSGENRGWRLSYR  114 (115)
T ss_dssp             CCEECCCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred             CCEEecCCEEEEEEEcCCCCCCCCEEEEEE
Confidence            67888899999999998654  88988653

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.86  E-value=8e-06  Score=60.23  Aligned_cols=59  Identities=31%  Similarity=0.763  Sum_probs=41.7

Q ss_pred             CCCcC--CCCCCCeecCC-CCeeeecCCCCc--cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819          31 ASLCY--NKCIYGYCKGP-PDYSCQCELGWT--GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTTGD   91 (377)
Q Consensus        31 ~~~C~--~~C~~G~C~~~-~~~~C~C~~G~~--G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~G~   91 (377)
                      +..|.  +||+||+|++. ++|+|.|++||+  |..|+.  +|    +|.+ ++|+  .++++| .|++||+|.
T Consensus         5 ideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C-~C~~G~~g~   76 (82)
T 1emn_A            5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFEC-TCEEGFEPG   76 (82)
T ss_dssp             CCSSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEE-CCSSSSCCC
T ss_pred             cccCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEe-ECCCCeEeC
Confidence            44554  68999999974 489999999997  887753  23    4654 5887  456778 566666653

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.85  E-value=1.2e-06  Score=73.62  Aligned_cols=90  Identities=17%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             CCCCCCCCCc----c-ccc-ccC--CC---CCC--CCCCeecCC--------cccCCCCCC-CCCCCCCCCCCCccCCCc
Q psy9819         284 KQGKPSEGFN----A-TYQ-IFS--CP---DKC--PENRTCINN--------QCVCPPRRT-GPDCQEEICPNECHEFLN  341 (377)
Q Consensus       284 ~s~~c~~GF~----g-~~~-~~~--C~---~~C--~~~g~C~~g--------~C~C~~G~~-G~~C~~~~C~~~C~~~~~  341 (377)
                      +.+.|.+||.    + .+. +++  |.   .+|  .++++|++.        +|.|++||. |..|+.  |+.. ....+
T Consensus        24 y~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~--C~~~-~~~~y  100 (162)
T 1uzk_A           24 YICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEM--CPAV-NTSEY  100 (162)
T ss_dssp             EEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEE--CCCT-TSHHH
T ss_pred             EEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCccc--CCCC-CCCCc
Confidence            5567889997    4 332 233  52   123  357788542        699999998 888863  4322 11246


Q ss_pred             eEEeCC--CCCCC-----------------CCCCCCeecccccCeeeecCCCeeC
Q psy9819         342 HGTCDL--LLTGV-----------------HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       342 ~c~C~~--g~~G~-----------------~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      +|+|++  ||.|.                 .|.+ ++|++.+++|+|+|++||.+
T Consensus       101 ~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g  154 (162)
T 1uzk_A          101 KILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYL  154 (162)
T ss_dssp             HHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCB
T ss_pred             eeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccC
Confidence            788887  88764                 1555 59999999999999999963

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.82  E-value=5.4e-06  Score=55.93  Aligned_cols=37  Identities=27%  Similarity=0.573  Sum_probs=28.8

Q ss_pred             cccccCC-CCCCCCCCeec-----CC----cccCCCCCCCCCCCCCC
Q psy9819         295 TYQIFSC-PDKCPENRTCI-----NN----QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       295 ~~~~~~C-~~~C~~~g~C~-----~g----~C~C~~G~~G~~C~~~~  331 (377)
                      ..++++| .++|+|+|+|.     ++    +|.|++||+|.+||..+
T Consensus         5 ~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v   51 (55)
T 3u7u_G            5 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV   51 (55)
T ss_dssp             EEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred             cccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence            3456788 56799999993     33    79999999999999754

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.80  E-value=1.1e-05  Score=66.31  Aligned_cols=58  Identities=29%  Similarity=0.899  Sum_probs=38.1

Q ss_pred             ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC--CC-----CCCCCcee-e--cCCCcccCCCCCCC
Q psy9819          29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV--NC-----LCNNHSTC-V--HGIGICDECHDWTT   89 (377)
Q Consensus        29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~--~C-----~C~~~g~C-~--~~~~~C~~C~~g~~   89 (377)
                      ..+..|. +||+| |+|++. ++|+|.|++||+|..|+.  +|     .|.+  +| +  .+++.| .|++||+
T Consensus        46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C-~C~~Gy~  116 (146)
T 1x7a_L           46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLC-SCTTGYR  116 (146)
T ss_dssp             ----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCC-BCCTTEE
T ss_pred             CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEe-EcCCCcE
Confidence            3455674 68988 899864 489999999999999985  33     2322  56 4  345667 5666665

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=97.80  E-value=2.1e-05  Score=71.88  Aligned_cols=119  Identities=24%  Similarity=0.462  Sum_probs=82.5

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcC----
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHR----  267 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~----  267 (377)
                      ...|.|.|.+       +.+.+|+|+|. .+++    .|..|++.|+||..             .++.+|+...+.    
T Consensus        24 ~~~C~w~I~~-------~~g~~I~L~F~-~f~le~~~~C~~D~l~v~dg~~-------------~~~~~CG~~~~~~~~~   82 (278)
T 3dem_A           24 DSEVTWNITV-------PDGFRIKLYFM-HFNLESSYLCEYDYVKVETEDQ-------------VLATFCGRETTDTEQT   82 (278)
T ss_dssp             SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEECSSC-------------EEEEECSBSSSSSSCC
T ss_pred             CCcEEEEEEE-------CCCCEEEEEEE-EEEeCCCCCCCCcEEEEecCCc-------------ccceEcCCcCCCcccC
Confidence            5679999999       55678999887 5554    38899999999743             346788765321    


Q ss_pred             -CCcceecCCCeeEeccCCCCCC----CCCccccc---ccCCCC------CCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819         268 -GYEVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPD------KCPENRTCINN----QCVCPPRRTGPDCQE  329 (377)
Q Consensus       268 -~p~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~------~C~~~g~C~~g----~C~C~~G~~G~~C~~  329 (377)
                       .+..+.+.++.|.|.|.++...    .||.+.+.   .++|..      .|..  .|.+.    .|.|.+||.....+ 
T Consensus        83 ~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~~C~~~~~~~~~c~~--~C~n~~g~~~C~C~~Gy~l~~d~-  159 (278)
T 3dem_A           83 PGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDH--YCHNYIGGYYCSCRFGYILHTDN-  159 (278)
T ss_dssp             CTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCTTTC-----CCCSS--EEEEETTEEEEECCTTCEECTTS-
T ss_pred             CCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccccCCCCCCCcccCCc--CcCCccCCcEEEeCCcceeccCC-
Confidence             2356888999999999998654    58988664   346632      2332  25322    79999999876543 


Q ss_pred             CCCCCCccC
Q psy9819         330 EICPNECHE  338 (377)
Q Consensus       330 ~~C~~~C~~  338 (377)
                      +.|...|..
T Consensus       160 ~~C~~~Cgg  168 (278)
T 3dem_A          160 RTCRVECSD  168 (278)
T ss_dssp             SCEECCCCC
T ss_pred             CCCcccCCC
Confidence            345556653

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=97.77  E-value=3.3e-05  Score=70.55  Aligned_cols=80  Identities=25%  Similarity=0.495  Sum_probs=62.1

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY  269 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p  269 (377)
                      ..+|.|.|.+       +.+.+|.|+|.+.+++      .|..|++.|+||..             .++.+|+..   .|
T Consensus       190 ~~~C~w~i~~-------~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg~~-------------~~~~~CG~~---~p  246 (278)
T 3dem_A          190 SSECLYTIEL-------EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK-------------VLGPFCGEK---AP  246 (278)
T ss_dssp             SCEEEEEEEC-------CTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEETTE-------------EEEEECBSS---CC
T ss_pred             cCeEEEEEEe-------CCCcEEEEEEccccccccCCCCCCCCCEEEEecCCc-------------ccccccCCC---CC
Confidence            5679999999       5566899998732554      48999999999743             346788765   45


Q ss_pred             cceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      ..+.+.++.|.|.|.++...  .||.+.|..
T Consensus       247 ~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~  277 (278)
T 3dem_A          247 EPISTQSHSVLILFHSDNSGENRGWRLSYRA  277 (278)
T ss_dssp             CCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred             CCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence            67889999999999998754  899887653

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.76  E-value=6e-06  Score=61.50  Aligned_cols=65  Identities=25%  Similarity=0.547  Sum_probs=45.2

Q ss_pred             cccCCC---CCCCCCCeecCC----cccCCCCCC-----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccc
Q psy9819         297 QIFSCP---DKCPENRTCINN----QCVCPPRRT-----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV  364 (377)
Q Consensus       297 ~~~~C~---~~C~~~g~C~~g----~C~C~~G~~-----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~  364 (377)
                      ++++|.   ..|.+ ++|++.    +|.|++||+     |..|+..   +.|....           ..|. +++|++.+
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di---deC~~~~-----------~~C~-~~~C~n~~   65 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI---DECQRDP-----------LLCR-GGVCHNTE   65 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC---CHHHHCS-----------STTT-TSEEEEET
T ss_pred             ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc---ccccCCC-----------CcCC-CCEeEcCC
Confidence            356773   23864 599654    799999998     6677532   4444321           1354 36999999


Q ss_pred             cCeeeecCCCeeC
Q psy9819         365 DLIRCTCRQVYLI  377 (377)
Q Consensus       365 ~~~~c~~~~~~~~  377 (377)
                      ++|+|.|++||++
T Consensus        66 g~y~C~C~~G~~~   78 (86)
T 1lmj_A           66 GSYRCECPPGHQL   78 (86)
T ss_dssp             TEEEEESCTTSCC
T ss_pred             CCEEEECcCCccc
Confidence            9999999999974

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=97.75  E-value=3.7e-05  Score=70.63  Aligned_cols=82  Identities=17%  Similarity=0.395  Sum_probs=61.3

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc---CC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH---RG  268 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~---~~  268 (377)
                      ..+|.|.|.+       +.+.+|+|+|. .+++    .|..|++.|+||..             +++.+|+....   ..
T Consensus        23 ~~~C~w~I~~-------p~g~~I~L~F~-~f~le~~~~C~~D~l~I~dg~~-------------~~~~~CG~~~~~~~~~   81 (286)
T 1nt0_A           23 HQDRSWTLTA-------PPGFRLRLYFT-HFNLELSYRCEYDFVKLTSGTK-------------VLATLCGQESTDTERA   81 (286)
T ss_dssp             SCCEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEEETTE-------------EEEEECSSSCCSSCBC
T ss_pred             CCcEEEEEEc-------CCCCEEEEEEE-EEEecCCCCCCCcEEEEECCCe-------------EeceECCCcCCCcccC
Confidence            5679999999       56678999987 5554    48899999999743             34778876410   13


Q ss_pred             C--cceecCCCeeEeccCCCCCC----CCCcccccc
Q psy9819         269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQI  298 (377)
Q Consensus       269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~~  298 (377)
                      |  ..+.+.++.|.|.|.++...    .||.+.+..
T Consensus        82 P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~  117 (286)
T 1nt0_A           82 PGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAA  117 (286)
T ss_dssp             CTTCEEECSSSEEEEEEECCC----CCCEEEEEEEE
T ss_pred             CCCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEe
Confidence            5  67889999999999998653    789986654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.71  E-value=1.3e-05  Score=63.11  Aligned_cols=56  Identities=30%  Similarity=0.727  Sum_probs=38.7

Q ss_pred             cCCCCCC-CeecCC-CCeeeecCCCCccCCCCCC-----CCCCCCc---eee--cCCCcccCCCCCCCC
Q psy9819          34 CYNKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN-----CLCNNHS---TCV--HGIGICDECHDWTTG   90 (377)
Q Consensus        34 C~~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~-----C~C~~~g---~C~--~~~~~C~~C~~g~~G   90 (377)
                      |...|.+ |+|++. ++|+|.|++||+|..|+..     |.-.+++   +|+  .++++| .|++||+|
T Consensus        18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C-~C~~G~~~   85 (114)
T 1aut_L           18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRC-SCAPGYKL   85 (114)
T ss_dssp             SSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEE-ECCTTEEE
T ss_pred             ccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEe-ECCCCeeE
Confidence            3333865 899864 4899999999999999852     4222333   786  456778 57776664

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=97.68  E-value=4.9e-05  Score=72.12  Aligned_cols=106  Identities=24%  Similarity=0.428  Sum_probs=77.5

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCC------CCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDI------NVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY  269 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~------~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p  269 (377)
                      ..+|.|.|.+       ..+.+|.|+|.+.+      +..|.+||+.|+||..             +++.+|+..   .|
T Consensus       190 ~~~C~w~i~~-------~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~~-------------~~~~~cG~~---~p  246 (361)
T 4aqb_A          190 SSECLYTIEL-------EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK-------------VLGPFCGEK---AP  246 (361)
T ss_dssp             SCEEEEEEEC-------CTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETTE-------------EEEEECBSS---CC
T ss_pred             CceeeEEeee-------ccCcEEEEEEeecccccCCccCccCCCeEEEeeCCe-------------eEEeeCCCC---CC
Confidence            5679999999       56678999886322      3458999999999743             347788765   45


Q ss_pred             cceecCCCeeEeccCCCCCC--CCCcccccc--cCCCCC-CCCCCeecCC----------cccCCCCCCC
Q psy9819         270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQI--FSCPDK-CPENRTCINN----------QCVCPPRRTG  324 (377)
Q Consensus       270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~--~~C~~~-C~~~g~C~~g----------~C~C~~G~~G  324 (377)
                      ....+.++.++|.|.++...  .||.+.|..  ..|+.+ ...+|.+...          ++.|++||.-
T Consensus       247 ~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l  316 (361)
T 4aqb_A          247 EPISTQSHSVLILFHSDNSGENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKV  316 (361)
T ss_dssp             CCEECSCSEEEEEEECCSCCCCCBCEEEEEEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEE
T ss_pred             CCEeecCCeEEEEEEeCCCCCccceEEEEEEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEE
Confidence            77889999999999998765  999996654  456432 4556666321          4889999863

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.62  E-value=2.7e-05  Score=48.50  Aligned_cols=32  Identities=25%  Similarity=0.726  Sum_probs=26.1

Q ss_pred             ccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819         298 IFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQE  329 (377)
Q Consensus       298 ~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~  329 (377)
                      +++| .++|.++|+|++.    +|.|++||+|.+||+
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~   39 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence            4567 4679999999643    799999999999974

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.62  E-value=3.1e-05  Score=48.27  Aligned_cols=34  Identities=35%  Similarity=0.992  Sum_probs=26.7

Q ss_pred             CCCcC-CCCCC-CeecC-CCCeeeecCCCCccCCCCC
Q psy9819          31 ASLCY-NKCIY-GYCKG-PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        31 ~~~C~-~~C~~-G~C~~-~~~~~C~C~~G~~G~~C~~   64 (377)
                      +..|. +||+| |+|++ .++|+|.|++||+|..|++
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~   39 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence            34454 68988 78985 4479999999999999873

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.54  E-value=7.1e-06  Score=54.86  Aligned_cols=36  Identities=8%  Similarity=0.167  Sum_probs=31.1

Q ss_pred             eEEeCCCCCCCCCCCCCeecc----cccCeeeecCCCeeC
Q psy9819         342 HGTCDLLLTGVHITHGRTLHY----QVDLIRCTCRQVYLI  377 (377)
Q Consensus       342 ~c~C~~g~~G~~C~~g~~~~~----~~~~~~c~~~~~~~~  377 (377)
                      .|.|+++|+...|.||++|++    .+++|+|+|+++|++
T Consensus         4 ~C~C~~g~~~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G   43 (52)
T 3ca7_A            4 TYKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMG   43 (52)
T ss_dssp             CBCCCHHHHHHTSCTTCEEEEEEETTEEEEEEECCTTEES
T ss_pred             eeECCCCCcCCcCCCCCEEecCccCCCCCEEEECCCCCcC
Confidence            588888888788999999996    577899999999974

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.54  E-value=6.3e-05  Score=50.34  Aligned_cols=28  Identities=32%  Similarity=1.003  Sum_probs=24.5

Q ss_pred             CCCC-Ceec--C-CCCeeeecCCCCccCCCCC
Q psy9819          37 KCIY-GYCK--G-PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~~-G~C~--~-~~~~~C~C~~G~~G~~C~~   64 (377)
                      ||+| |+|+  . .++|+|.|++||+|..|+.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            8998 8998  3 4589999999999999985

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.53  E-value=1.1e-05  Score=69.41  Aligned_cols=63  Identities=30%  Similarity=0.805  Sum_probs=15.9

Q ss_pred             ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCCC----C-----CCCCCceee--cCCCcccCCCCCCC----C
Q psy9819          29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN----C-----LCNNHSTCV--HGIGICDECHDWTT----G   90 (377)
Q Consensus        29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~----C-----~C~~~g~C~--~~~~~C~~C~~g~~----G   90 (377)
                      ..+..|. +||+| |+|++. ++|+|.|++||+|..|+..    |     .|.+  +|.  .+++.| .|++||+    |
T Consensus        40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C-~C~~Gy~l~~dG  116 (195)
T 1nfu_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGYTLADNG  116 (195)
T ss_dssp             -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTEEECTTS
T ss_pred             CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEE-ECCCCceeCCCC
Confidence            4456665 68988 899864 4899999999999999852    4     2433  786  456778 6777777    6


Q ss_pred             CCCC
Q psy9819          91 DHCQ   94 (377)
Q Consensus        91 ~~C~   94 (377)
                      ..|+
T Consensus       117 ~~C~  120 (195)
T 1nfu_B          117 KACI  120 (195)
T ss_dssp             SCEE
T ss_pred             Cccc
Confidence            6654

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.50  E-value=6.6e-05  Score=48.40  Aligned_cols=28  Identities=29%  Similarity=0.878  Sum_probs=24.1

Q ss_pred             CCCC-Ceec---CCCCeeeecCCCCccCCCCC
Q psy9819          37 KCIY-GYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~~-G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      ||+| |+|+   ..++|+|.|++||+|..|+.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence            8998 8996   34589999999999999984

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.50  E-value=2e-05  Score=61.27  Aligned_cols=69  Identities=17%  Similarity=0.466  Sum_probs=26.4

Q ss_pred             CCCcc-cccccCCCC---CCCCCCeecCC----cccCCCCCCC---CCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCC
Q psy9819         290 EGFNA-TYQIFSCPD---KCPENRTCINN----QCVCPPRRTG---PDCQEEICPNECHEFLNHGTCDLLLTGVHITHGR  358 (377)
Q Consensus       290 ~GF~g-~~~~~~C~~---~C~~~g~C~~g----~C~C~~G~~G---~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~  358 (377)
                      .||.+ .+++++|..   .|.  .+|++.    +|.|++||+|   ..|+..   +.|..            ...|.  +
T Consensus        20 ~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~di---deC~~------------~~~C~--~   80 (107)
T 2w2n_E           20 NLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQD------------PDTCS--Q   80 (107)
T ss_dssp             CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------
T ss_pred             CCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccc---cccCC------------CCCcC--C
Confidence            56666 666777742   254  478654    7999999998   667632   34432            12344  4


Q ss_pred             eecccccCeeeecCCCeeC
Q psy9819         359 TLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       359 ~~~~~~~~~~c~~~~~~~~  377 (377)
                      +|++.+++|+|.|++||.+
T Consensus        81 ~C~n~~gsy~C~C~~Gy~~   99 (107)
T 2w2n_E           81 LCVNLEGGYKCQCEEGFQL   99 (107)
T ss_dssp             -------------------
T ss_pred             eeecCCCCEEEECCCCceE
Confidence            8999999999999999974

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.48  E-value=3.3e-05  Score=57.40  Aligned_cols=59  Identities=29%  Similarity=0.675  Sum_probs=41.2

Q ss_pred             CCCcC---CCCCCCeecC-CCCeeeecCCCCc-----cCCCCC-------CCCCCCCceee--cCCCcccCCCCCCCCC
Q psy9819          31 ASLCY---NKCIYGYCKG-PPDYSCQCELGWT-----GVDCSV-------NCLCNNHSTCV--HGIGICDECHDWTTGD   91 (377)
Q Consensus        31 ~~~C~---~~C~~G~C~~-~~~~~C~C~~G~~-----G~~C~~-------~C~C~~~g~C~--~~~~~C~~C~~g~~G~   91 (377)
                      +..|.   .+|.||+|++ +++|+|.|++||+     |..|+.       +..|. +++|.  .++++| .|++||++.
T Consensus         3 ideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C-~C~~G~~~~   79 (86)
T 1lmj_A            3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRC-ECPPGHQLS   79 (86)
T ss_dssp             CCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEE-ESCTTSCCC
T ss_pred             cccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEE-ECcCCcccC
Confidence            34554   3498899986 4589999999998     677762       22465 57897  566788 566666653

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.46  E-value=9e-05  Score=49.59  Aligned_cols=34  Identities=26%  Similarity=0.687  Sum_probs=27.6

Q ss_pred             ccCCCC----CCCCCCeec--CC----cccCCCCCCCCCCCCCC
Q psy9819         298 IFSCPD----KCPENRTCI--NN----QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       298 ~~~C~~----~C~~~g~C~--~g----~C~C~~G~~G~~C~~~~  331 (377)
                      +++|..    +|.|+|+|+  +.    +|.|++||+|.+|+..+
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   46 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD   46 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence            466743    799999997  44    79999999999998753

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=97.43  E-value=0.00022  Score=65.33  Aligned_cols=81  Identities=20%  Similarity=0.328  Sum_probs=61.0

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY  269 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p  269 (377)
                      ..+|.|.|.+       +.+.+|.|+|.+.|++      .|..|++.|+||.             .+++.+|+..   .|
T Consensus       189 ~~~C~w~I~~-------~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~-------------~~~~~~CG~~---~p  245 (286)
T 1nt0_A          189 LSSCAYNIRL-------EEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK-------------REYGPFCGKT---LP  245 (286)
T ss_dssp             SCEEEEEEEC-------CSSCEEEEEECSCCBBCCC----C--CEEEEECSS-------------CEEEEECBSS---CC
T ss_pred             CCEEEEEEEC-------CCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCC-------------cceEEEcCCC---CC
Confidence            5689999999       5567899998424554      4889999999973             3457889865   45


Q ss_pred             cceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                      ..+.+.++.|.|.|.++...  .||.+.|...
T Consensus       246 ~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~~  277 (286)
T 1nt0_A          246 PRIETDSNKVTITFTTDESGNHTGWKIHYTST  277 (286)
T ss_dssp             CCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred             CCEEeeCCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence            67889999999999998754  8999977643

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=97.40  E-value=0.00011  Score=74.04  Aligned_cols=84  Identities=26%  Similarity=0.613  Sum_probs=66.9

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCc----------CCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----------CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM  265 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----------C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~  265 (377)
                      ..+|.|.|.+       +++..|.|+|. .|+++          |..||+.||||....         +++++.+|+.. 
T Consensus       152 n~~C~W~I~~-------p~g~~I~L~F~-~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~---------~~~lg~~CG~~-  213 (577)
T 4gz9_A          152 SLECTYIIFA-------PKMSEIILEFE-SFDLEQDSNPPGGMFCRYDRLEIWDGFPEV---------GPHIGRYCGQK-  213 (577)
T ss_dssp             SCEEEEEEEC-------GGGCCEEEEEE-EEECCCCCSCSTTCCCCSSEEEEESSSTTT---------SCEEEEECSSS-
T ss_pred             CceEEEEEEE-------CCCCEEEEEEE-EEEeeecCCCCCCCccCccEEEEEcCCCCC---------CceeEEEeCCC-
Confidence            5679999999       45668888887 55443          899999999986532         67889999875 


Q ss_pred             cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                        .|..+.+.++.|.|.|.++...  .||.+.|...
T Consensus       214 --~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~v  247 (577)
T 4gz9_A          214 --TPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSVL  247 (577)
T ss_dssp             --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred             --CCCCcceeCCEEEEEEEECCCCCCceEEEEEEEE
Confidence              4677899999999999998765  9999977654

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=97.39  E-value=0.0002  Score=60.40  Aligned_cols=38  Identities=24%  Similarity=0.684  Sum_probs=33.0

Q ss_pred             eEeeecCCCcCCCCCC-CeecCCCCeeeecCCCCccCCCCC
Q psy9819          25 LLYIFNASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        25 ~~~~~~~~~C~~~C~~-G~C~~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +-.....+.|+++|+| |.|+.|+  +|.|++||+|..|+.
T Consensus       142 ~~K~C~~~~C~~~C~ngG~Cv~P~--~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          142 FFKTCQQAECPGGCRNGGFCNERR--ICECPDGFHGPHCEG  180 (188)
T ss_dssp             EEEEECCCCCTTCCCTTCEECTTS--CEECCTTCBTTTTCB
T ss_pred             ecccccCCccCCCCCCCCEeCCCC--cccCcCCCCCCCCcC
Confidence            4445667999999998 8999987  999999999999985

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1

Probab=97.38  E-value=0.00012  Score=71.75  Aligned_cols=84  Identities=25%  Similarity=0.603  Sum_probs=66.5

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM  265 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~  265 (377)
                      ..+|.|.|.+       +.+.+|.|+|. .|++          .|..||+.||||....         +++++.+|+.. 
T Consensus        34 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~~~~~~~C~~D~l~i~dg~~~~---------~~~~~~~CG~~-   95 (450)
T 2qqm_A           34 SLECTYIVFA-------PKMSEIILEFE-SFDLEPDSNPPGGMFCRYDRLEIWDGFPDV---------GPHIGRYCGQK-   95 (450)
T ss_dssp             SCEEEEEEEC-------GGGCCEEEEEE-EEECCCC----CCCSSCSSEEEEESSSTTT---------SCEEEEECTTC-
T ss_pred             CCeEEEEEEe-------CCCCEEEEEEE-EEEeEeccCCCCCCCCCCcEEEEecCCCCC---------CccceeecCCc-
Confidence            5789999999       44568999887 4443          5899999999986522         56789999875 


Q ss_pred             cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                        .|..+.+.++.|.|.|.++...  .||.+.|...
T Consensus        96 --~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  129 (450)
T 2qqm_A           96 --TPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVL  129 (450)
T ss_dssp             --CCCEEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred             --CCCcEEEcCCEEEEEEEeCCccccCCeEEEEecc
Confidence              3567899999999999998754  9999977654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.37  E-value=5.9e-05  Score=56.14  Aligned_cols=60  Identities=22%  Similarity=0.553  Sum_probs=39.0

Q ss_pred             ccCCC-CC--CCCCCeecCC----cccCCCCCC----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccC
Q psy9819         298 IFSCP-DK--CPENRTCINN----QCVCPPRRT----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDL  366 (377)
Q Consensus       298 ~~~C~-~~--C~~~g~C~~g----~C~C~~G~~----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~  366 (377)
                      +++|. ++  | ++++|++.    +|.|++||+    |..|+..   +.|..+             .|.  ++|++.+++
T Consensus         3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di---deC~~~-------------~C~--~~C~n~~g~   63 (87)
T 1z6c_A            3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI---DECSEN-------------MCA--QLCVNYPGG   63 (87)
T ss_dssp             SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC---CHHHHS-------------CCS--SEECCCSSS
T ss_pred             cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCc---CeeCCC-------------CCC--CEEEccCCC
Confidence            46673 23  8 78899654    799999999    7788632   333221             233  377777777


Q ss_pred             eeeec--CCCee
Q psy9819         367 IRCTC--RQVYL  376 (377)
Q Consensus       367 ~~c~~--~~~~~  376 (377)
                      |+|+|  ..||.
T Consensus        64 y~C~C~g~~G~~   75 (87)
T 1z6c_A           64 YTCYCDGKKGFK   75 (87)
T ss_dssp             CCEECCSSSCCB
T ss_pred             EEEECCCCcCCc
Confidence            77777  45553

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}

Probab=97.35  E-value=0.00018  Score=70.57  Aligned_cols=84  Identities=21%  Similarity=0.550  Sum_probs=66.0

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM  265 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~  265 (377)
                      ..+|.|.|.+       +++..|.|+|. .|++          .|.+|++.||||....         .++++.+|+.. 
T Consensus        31 ~~~C~w~I~~-------~~g~~I~L~F~-~f~le~~~~~~~~~~C~~D~l~i~dg~~~~---------~~~~~~~CG~~-   92 (460)
T 2qqo_A           31 NLDCTFTILA-------KPKMEIILQFL-IFDLEHDPLQVGEGDCKYDWLDIWDGIPHV---------GPLIGKYCGTK-   92 (460)
T ss_dssp             SCEEEEEEEC-------CTTCEEEEEEE-EEECCCC--------CCSSEEEEESSSTTT---------SCEEEEECTTC-
T ss_pred             CCEEEEEEEc-------CCCCEEEEEEE-EEEcccccccccCCCCCCCEEEEEcCCCCC---------CcccceEeCCc-
Confidence            5679999999       56678999887 4443          4889999999986522         56788999875 


Q ss_pred             cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                        .|..+.+.++.+.|.|.++...  .||.+.|...
T Consensus        93 --~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~  126 (460)
T 2qqo_A           93 --TPSELRSSTGILSLTFHTDMAVAKDGFSARYYLV  126 (460)
T ss_dssp             --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEE
T ss_pred             --CCcCEEeeCCEEEEEEeccceeecCcEEEEEEEE
Confidence              3567889999999999998754  9999977654

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.35  E-value=2.6e-05  Score=63.18  Aligned_cols=63  Identities=30%  Similarity=0.815  Sum_probs=15.8

Q ss_pred             ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCCC----CC-----CCCCceee--cCCCcccCCCCCCC----C
Q psy9819          29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN----CL-----CNNHSTCV--HGIGICDECHDWTT----G   90 (377)
Q Consensus        29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~----C~-----C~~~g~C~--~~~~~C~~C~~g~~----G   90 (377)
                      ..+..|. +||+| |+|++. ++|+|.|++||+|..|+..    |.     |.+  +|+  .+++.| .|++||+    |
T Consensus        40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C-~C~~Gy~l~~~g  116 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGYTLADNG  116 (134)
T ss_dssp             -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTEEECTTS
T ss_pred             CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEE-ECCCCcEECCCC
Confidence            3445564 68988 899864 4899999999999999852    42     332  776  455778 6777777    6


Q ss_pred             CCCC
Q psy9819          91 DHCQ   94 (377)
Q Consensus        91 ~~C~   94 (377)
                      .+|+
T Consensus       117 ~~C~  120 (134)
T 2vh0_B          117 KACI  120 (134)
T ss_dssp             SCEE
T ss_pred             CccC
Confidence            6664

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=97.30  E-value=0.00037  Score=68.21  Aligned_cols=82  Identities=22%  Similarity=0.476  Sum_probs=65.7

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ...|.|.|.+       +++.+|+|+|. .+++    .|..||+.|+|+..           ..+++.+|+..   .|..
T Consensus        24 ~~~C~w~I~~-------~~g~~i~L~f~-~f~le~~~~C~~D~l~i~d~~~-----------~~~l~~~CG~~---~p~~   81 (457)
T 3kq4_B           24 GINCTWHILV-------QPNHLIHLMFE-TFHLEFHYNCTNDYLEVYDTDS-----------ETSLGRYCGKS---IPPS   81 (457)
T ss_dssp             SCCCEEEEEC-------CSSEEEEECCS-CCCCCCCSSCCSSEEEEECTTS-----------SSEEEEECSSC---CCSC
T ss_pred             CCcEEEEEEc-------CCCCEEEEEEE-eeecccCCCCCccEEEEEcCCC-----------CcccceeCCCC---CCCc
Confidence            5689999999       56779999998 6665    38899999999743           45678899875   3567


Q ss_pred             eecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         272 LEAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                      +.+.++.|.|.|.++...  .||.+.+...
T Consensus        82 ~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~  111 (457)
T 3kq4_B           82 LTSSGNSLMLVFVTDSDLAYEGFLINYEAI  111 (457)
T ss_dssp             EECSSSEEEEEEECCSSCCCSCCCCEEEEE
T ss_pred             EEEeCCEEEEEEEecCccccCceeEeeecc
Confidence            888999999999998654  8999977654

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.25  E-value=9.5e-05  Score=49.42  Aligned_cols=30  Identities=30%  Similarity=0.875  Sum_probs=25.2

Q ss_pred             CCCCCC-Ceec---CCCCeeeecCCCCccCCCCC
Q psy9819          35 YNKCIY-GYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        35 ~~~C~~-G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      .+||+| |+|+   ..++|+|.|++||+|..|++
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   44 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence            368998 8996   34479999999999999985

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.22  E-value=0.00012  Score=47.06  Aligned_cols=28  Identities=21%  Similarity=0.512  Sum_probs=23.8

Q ss_pred             CCCCCCeec--CC----cccCCCCCCCCCCCCCC
Q psy9819         304 KCPENRTCI--NN----QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       304 ~C~~~g~C~--~g----~C~C~~G~~G~~C~~~~  331 (377)
                      +|.|+|+|+  +.    +|.|++||+|.+|+..+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   43 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD   43 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence            799999996  33    79999999999998653

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.21  E-value=0.0002  Score=49.76  Aligned_cols=29  Identities=38%  Similarity=0.993  Sum_probs=25.2

Q ss_pred             CCCCC-CeecC------CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKG------PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~------~~~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|+.      .++|+|.|++||+|..|++
T Consensus        12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~   47 (63)
T 1hae_A           12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence            68998 89984      3589999999999999985

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=97.15  E-value=0.00046  Score=69.62  Aligned_cols=86  Identities=23%  Similarity=0.498  Sum_probs=65.4

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCC---CcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcce
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDIN---VPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL  272 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~---~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c  272 (377)
                      ..+|.|.|.++.      ...+|.|+|...|+   ..|..||+.|+||....         +++++.+|+..   .|..+
T Consensus        33 n~~C~W~I~~p~------~~~~I~L~F~~~f~le~~~C~~Dyl~I~dG~~~~---------~~~lg~~CG~~---~p~~i   94 (577)
T 4gz9_A           33 SEKCEWLIQAPE------PYQRIMINFNPHFDLEDRDCKYDYVEVIDGENEG---------GRLWGKFCGKI---APSPV   94 (577)
T ss_dssp             SCEEEEEEECSS------TTCCEEEEECSCCBCCCGGGTSSEEEEEESSSTT---------SEEEEEECSSS---CCCCE
T ss_pred             CCeEEEEEEECC------CCcEEEEEEEeeeeecCCCCCccEEEEEeCCCCC---------CcEEEEecCCC---CCCCE
Confidence            567999999843      22478888853343   45899999999986532         56789999865   45678


Q ss_pred             ecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819         273 EAKSGVMTIHYKQGKPS--EGFNATYQIF  299 (377)
Q Consensus       273 ~~~sG~~~v~~~s~~c~--~GF~g~~~~~  299 (377)
                      .+.++.|.|.|.++...  .||.+.+...
T Consensus        95 ~S~~n~l~v~F~SD~s~~~~GF~a~y~~~  123 (577)
T 4gz9_A           95 VSSGPFLFIKFVSDYETHGAGFSIRYEIF  123 (577)
T ss_dssp             ECSSSEEEEEEECCSSCCCCBCEEEEEEC
T ss_pred             EEeCCeEEEEEEECCCCCCCCeEEEEEEe
Confidence            89999999999998755  8999977653

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=97.14  E-value=0.00026  Score=59.63  Aligned_cols=36  Identities=33%  Similarity=0.790  Sum_probs=31.3

Q ss_pred             cccccCCCCCCCCCCeec-CCcccCCCCCCCCCCCCC
Q psy9819         295 TYQIFSCPDKCPENRTCI-NNQCVCPPRRTGPDCQEE  330 (377)
Q Consensus       295 ~~~~~~C~~~C~~~g~C~-~g~C~C~~G~~G~~C~~~  330 (377)
                      .+....|+.+|+|+|.|+ .++|.|++||+|.+|+..
T Consensus       145 ~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~~  181 (188)
T 2ygo_A          145 TCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEGT  181 (188)
T ss_dssp             EECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCBC
T ss_pred             cccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcCC
Confidence            556678998999999995 569999999999999974

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=97.13  E-value=0.00032  Score=66.48  Aligned_cols=116  Identities=21%  Similarity=0.286  Sum_probs=73.1

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc-CCCc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH-RGYE  270 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~-~~p~  270 (377)
                      ..+|.|.|.+       +.+.+|+|+|. .|++    .|.+||+.|+||....         ..+.|..+..... ..+.
T Consensus        24 n~~C~W~I~~-------~~g~~I~l~F~-~f~lE~~~~C~~D~l~i~dg~~~~---------~~~cG~~~~~~~~~~~~~   86 (361)
T 4aqb_A           24 DSEVTWNITV-------PDGFRIKLYFM-HFNLESSYLCEYDYVKVETEDQVL---------ATFCGRETTDTEQTPGQE   86 (361)
T ss_dssp             SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEECSSCEE---------EEECSBSSSSSSCCCTTC
T ss_pred             CCeEEEEEEE-------CCCCEEEEEEe-EEEecCCCCCCceEEEEccCCccc---------ceeeccccCCCccCCCcc
Confidence            5679999999       56678999987 5554    4789999999975422         2223333322211 1234


Q ss_pred             ceecCCCeeEeccCCCCCC----CCCcccccc---cCCCCC----CCCCCeec--CC--cccCCCCCCCCCCC
Q psy9819         271 VLEAKSGVMTIHYKQGKPS----EGFNATYQI---FSCPDK----CPENRTCI--NN--QCVCPPRRTGPDCQ  328 (377)
Q Consensus       271 ~c~~~sG~~~v~~~s~~c~----~GF~g~~~~---~~C~~~----C~~~g~C~--~g--~C~C~~G~~G~~C~  328 (377)
                      .+.+..+.|+|.|.++...    .||.+.+..   .+|...    -.-...|.  .+  .|.|..+|....-.
T Consensus        87 ~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~  159 (361)
T 4aqb_A           87 VVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDN  159 (361)
T ss_dssp             CEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTS
T ss_pred             ceeccCCEeEEEEEeCCcccccccccccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEeccc
Confidence            5788889999999998654    489886543   344211    11122332  22  69999999765443

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.10  E-value=0.00015  Score=46.84  Aligned_cols=32  Identities=31%  Similarity=0.704  Sum_probs=25.0

Q ss_pred             ccCCC----CCCCCCCeecC--C----cccCCCCCCCCCCCCC
Q psy9819         298 IFSCP----DKCPENRTCIN--N----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       298 ~~~C~----~~C~~~g~C~~--g----~C~C~~G~~G~~C~~~  330 (377)
                      +++|+    ++|.| |+|++  +    .|+|++||+|.+||..
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~   44 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence            45663    57999 89952  1    6999999999999864

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.08  E-value=0.00013  Score=48.62  Aligned_cols=29  Identities=34%  Similarity=0.909  Sum_probs=20.0

Q ss_pred             CCCCC-CeecC-----CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKG-----PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~-----~~~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|+.     .++|+|.|++||+|..|+.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            46777 67773     2357788888888877763

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.05  E-value=0.0002  Score=56.86  Aligned_cols=51  Identities=25%  Similarity=0.553  Sum_probs=41.9

Q ss_pred             CCCCCCeecCC-------cccCCCCCCCCCCCCCCCCCCccCC---CceEEeCCCCCCCCCC
Q psy9819         304 KCPENRTCINN-------QCVCPPRRTGPDCQEEICPNECHEF---LNHGTCDLLLTGVHIT  355 (377)
Q Consensus       304 ~C~~~g~C~~g-------~C~C~~G~~G~~C~~~~C~~~C~~~---~~~c~C~~g~~G~~C~  355 (377)
                      +|+|+|+|++.       +|.|++||+|.+||+++. .+|...   .+++++..+++|..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-~~C~~g~G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEGNGHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-CCSBCSSCTTCCSCCCBBTTSCBBC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-CCCcccccccceeeccccccCCccc
Confidence            59999999543       699999999999998642 356433   5789999999999998

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=97.02  E-value=0.00077  Score=65.96  Aligned_cols=83  Identities=23%  Similarity=0.509  Sum_probs=65.4

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV  271 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~  271 (377)
                      ...|.|.|.+       +.+.+|.|.|. .+++    .|..|++.||||....         +.+++.+|+..   .|..
T Consensus       257 ~~~C~w~I~~-------~~~~~i~l~f~-~f~le~~~~C~~D~l~i~dg~~~~---------~~~l~~~CG~~---~p~~  316 (457)
T 3kq4_B          257 SSECYWWLKS-------SHGSAFELEFK-DFHLEHHPNCTLDYLAVYDGPSSN---------SHLLTQLCGDE---KPPL  316 (457)
T ss_dssp             SCEEEEEECC-------STTCCEEEEEE-ECCCCCCTTCCSSEEEEEESSSTT---------SEEEEEECSSC---CCCC
T ss_pred             CCEEEEEEEe-------CCCCEEEEEEE-eeeecCCCCcCCCEEEEEeCCCCC---------chhhhhhcCCc---CCCC
Confidence            5679999999       55678999887 5554    4899999999986522         56788999875   4567


Q ss_pred             eecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         272 LEAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      +.+.++.|.|.|.++...  .||.+.|..
T Consensus       317 i~S~~n~l~v~f~sd~~~~~~GF~a~y~~  345 (457)
T 3kq4_B          317 IRSSGDSMFIKLRTDEGQQGRGFKAEYRQ  345 (457)
T ss_dssp             EECSSSCEEEEEECCSSCCCCCCEEEEEE
T ss_pred             EEecCCEEEEEEEeCCcccCCeEEEEEEe
Confidence            888999999999988654  899997753

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.00  E-value=0.00024  Score=52.78  Aligned_cols=53  Identities=30%  Similarity=0.753  Sum_probs=37.8

Q ss_pred             CCCCeecCC-CCeeeecCCCCc----cCCCCC--CC---CCCCCceee--cCCCcccCCCCCCCCCCCC
Q psy9819          38 CIYGYCKGP-PDYSCQCELGWT----GVDCSV--NC---LCNNHSTCV--HGIGICDECHDWTTGDHCQ   94 (377)
Q Consensus        38 C~~G~C~~~-~~~~C~C~~G~~----G~~C~~--~C---~C~~~g~C~--~~~~~C~~C~~g~~G~~C~   94 (377)
                      |.+++|++. ++|+|.|++||+    |..|+.  +|   +|.  ++|.  .+++.| .|+ ++.|..++
T Consensus        13 C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C-~C~-g~~G~~~~   77 (87)
T 1z6c_A           13 CGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTC-YCD-GKKGFKLA   77 (87)
T ss_dssp             BTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCE-ECC-SSSCCBCC
T ss_pred             CCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEE-ECC-CCcCCccc
Confidence            755889864 489999999999    777863  23   454  5786  456788 676 66666553

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=96.99  E-value=0.0005  Score=63.82  Aligned_cols=58  Identities=28%  Similarity=0.796  Sum_probs=39.4

Q ss_pred             cCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC---CC------CCCCCceee--cCCCcccCCCCCCCC
Q psy9819          30 NASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---NC------LCNNHSTCV--HGIGICDECHDWTTG   90 (377)
Q Consensus        30 ~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~C------~C~~~g~C~--~~~~~C~~C~~g~~G   90 (377)
                      .+..|. +||+| |+|.+. ++|+|.|++||+|..|+.   +|      +|.+  +|.  .+.+.| .|+++|.|
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C-~C~~g~~~   75 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTC-SCAQGYRL   75 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEE-ECCTTEEC
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEE-eccccccc
Confidence            455666 68988 889864 489999999999999983   23      2333  665  345677 46655554

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=96.96  E-value=0.00018  Score=72.70  Aligned_cols=53  Identities=21%  Similarity=0.473  Sum_probs=45.3

Q ss_pred             CCCCCCCcc-ccc-ccCCCCCCCCCCeecCCcccCCCCCCCCCCCCCC--CCCCccC
Q psy9819         286 GKPSEGFNA-TYQ-IFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEI--CPNECHE  338 (377)
Q Consensus       286 ~~c~~GF~g-~~~-~~~C~~~C~~~g~C~~g~C~C~~G~~G~~C~~~~--C~~~C~~  338 (377)
                      ..|.+||.+ .+. ...|+..|++||.|++|+|.|.+||+|.+|+++.  ||..|..
T Consensus       520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~~~~~~~~  576 (725)
T 2e26_A          520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETSLPTQLKD  576 (725)
T ss_dssp             CCTTCCEEEEEEEEESCSSGGGGGSEEEETTEEEECTTEESTTSCEESSCCCSCEEE
T ss_pred             CccCCCcccccccccCCCCcccCCCcEECCCCEeeCCCccCCCcCccCCCCchhhhc
Confidence            468899999 677 4889999999999999999999999999999765  4566653

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.95  E-value=0.038  Score=56.86  Aligned_cols=51  Identities=18%  Similarity=0.509  Sum_probs=33.5

Q ss_pred             CeecCC----cccCCCCCC---CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCee
Q psy9819         309 RTCINN----QCVCPPRRT---GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       309 g~C~~g----~C~C~~G~~---G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      .+|++.    +|.|++||+   |..|+..   +.|...            ..|.+  +|++.+++|+|.|++||.
T Consensus       306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~di---deC~~~------------~~C~~--~C~n~~g~y~C~C~~G~~  363 (699)
T 1n7d_A          306 HVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQDP------------DTCSQ--LCVNLEGGYKCQCEEGFQ  363 (699)
T ss_dssp             TTCCCCTTCCCCCCCSSSCCCSSSCCCCC---CCCSSS------------SSCTT--TCCBCSSCBCCCCCSSCB
T ss_pred             CCcccCCCCcEEeCCCCeEcCCCCcccCc---cccCCC------------Ccccc--ccccCCCCeeeeeecccc
Confidence            356543    799999999   7788742   444321            12333  677777788888887775

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.89  E-value=0.00027  Score=48.12  Aligned_cols=28  Identities=36%  Similarity=0.979  Sum_probs=23.9

Q ss_pred             CCCC-Ceec-----CCCCeeeecCCCCccCCCCC
Q psy9819          37 KCIY-GYCK-----GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~~-G~C~-----~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +|+| |+|.     ....|.|.|++||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            7999 7998     23378999999999999985

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.78  E-value=0.00044  Score=47.51  Aligned_cols=34  Identities=29%  Similarity=0.707  Sum_probs=27.3

Q ss_pred             CCCcC-CCCCCC---eecCC-CCeeeecCCCCc-cCCCCC
Q psy9819          31 ASLCY-NKCIYG---YCKGP-PDYSCQCELGWT-GVDCSV   64 (377)
Q Consensus        31 ~~~C~-~~C~~G---~C~~~-~~~~C~C~~G~~-G~~C~~   64 (377)
                      +..|. +||+||   +|++. ++|+|.|++||+ |.+|+.
T Consensus        11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred             CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence            34564 799885   89864 489999999999 999974

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.78  E-value=0.012  Score=60.78  Aligned_cols=148  Identities=22%  Similarity=0.537  Sum_probs=81.9

Q ss_pred             CCCCCeecCCCCeee----ecCCCCccCCCCC-CC-----CCCCCceeecCCCcccC----CCCCCCCCCCC---CCC-C
Q psy9819          37 KCIYGYCKGPPDYSC----QCELGWTGVDCSV-NC-----LCNNHSTCVHGIGICDE----CHDWTTGDHCQ---YCR-A   98 (377)
Q Consensus        37 ~C~~G~C~~~~~~~C----~C~~G~~G~~C~~-~C-----~C~~~g~C~~~~~~C~~----C~~g~~G~~C~---~C~-~   98 (377)
                      .|.+|.|+. .++.|    .|..|.-...|.. .|     .|. .++|++.+.+| .    |..+..+..|+   .|. +
T Consensus       182 ~C~~g~Ci~-~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~C-dg~~dC~dgsde~~C~~~~~C~~~  258 (699)
T 1n7d_A          182 HCLSGECIH-SSWRCDGGPDCKDKSDEENCAVATCRPDEFQCS-DGNCIHGSRQC-DREYDCKDMSDEVGCVNVTLCEGP  258 (699)
T ss_dssp             CCSSSCCCS-TTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESS-SSCEEETTCCS-SSCCCSSSSCSSSSTTCCCCCCST
T ss_pred             ecCCCceEe-chhccCCCCCCCCCcccccCCCcccCCCcEecC-CCceeeeeccc-CCCCCCCCCCccCCCCCCCcccCC
Confidence            477788884 46777    7888887777864 34     354 46788777777 4    77777776664   232 1


Q ss_pred             CcccCCCCCCCccC--------CCCCCCCCcC-----cccccCCCcce--ecCCCCccCCCccCCCCccCCCCCCCCCCC
Q psy9819          99 GSYGNATTQEGCRK--------CDCNSHGNSV-----LGVCDSITGEC--ICQDNTQGKNCERCLPGYYGDPTDGGTCYY  163 (377)
Q Consensus        99 g~~g~~c~~~~C~~--------~~C~~~g~~~-----~g~C~~~~g~C--~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~  163 (377)
                      +.  ..|....|.+        ..|..+....     ...|....+.|  .|.....+..|. |++||.+.  ++..|..
T Consensus       259 ~~--~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~-C~~G~~~~--~~~~C~d  333 (699)
T 1n7d_A          259 NK--FKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECL-CPDGFQLV--AQRRCED  333 (699)
T ss_dssp             TC--CCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCC-CCSSSCCC--SSSCCCC
T ss_pred             Cc--eecCCCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEe-CCCCeEcC--CCCcccC
Confidence            10  0111111110        1111110000     00122112223  244445556664 77777751  2335543


Q ss_pred             --CCCCCCCCCCCCCCCCCCcc-cCCCCCccC
Q psy9819         164 --QCMARGMLTGPGPQGLGSGL-AERNAWEGK  192 (377)
Q Consensus       164 --~C~~~g~~~~~~~~~~g~~~-~c~~G~~G~  192 (377)
                        +|...+.+...|.+..|+|. .|.+||++.
T Consensus       334 ideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          334 IDECQDPDTCSQLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             CCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCC
T ss_pred             ccccCCCCccccccccCCCCeeeeeecccccC
Confidence              67655566778999999999 999999975

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=96.74  E-value=0.0012  Score=66.66  Aligned_cols=83  Identities=22%  Similarity=0.556  Sum_probs=63.4

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM  265 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~  265 (377)
                      ...|.|.|.+       .++..|.|+|. .|++          .|..|++.||||....         .++++.+|+.. 
T Consensus       150 ~~~C~w~I~~-------~~g~~I~l~F~-~f~le~~~~~~~~~~C~~D~l~I~dg~~~~---------~~~~~~~CG~~-  211 (579)
T 2qqk_A          150 NLDCTFTILA-------KPKMEIILQFL-IFDLEHDPLQVGEGDCKYDWLDIWDGIPHV---------GPLIGKYCGTK-  211 (579)
T ss_dssp             SCEEEEEEEC-------CTTEEEEEEEE-EEEC-------------CCEEEEESSSTTT---------SCEEEEECSSS-
T ss_pred             CCeEEEEEEc-------CCCCEEEEEEE-EEEeecccccccCCCCCCEEEEEEeCCCCC---------CceeEEeCCCC-
Confidence            5689999999       56678998887 4443          4889999999986522         56788999875 


Q ss_pred             cCCCcceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                        .|..+.+.++.+.|.|.++...  .||.+.|..
T Consensus       212 --~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~  244 (579)
T 2qqk_A          212 --TPSELRSSTGILSLTFHTDMAVAKDGFSARYYL  244 (579)
T ss_dssp             --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred             --CCCcEEeeCCeEEEEEeccccccccceEEEEEE
Confidence              3577889999999999998754  899997654

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=96.74  E-value=0.0018  Score=65.26  Aligned_cols=85  Identities=22%  Similarity=0.518  Sum_probs=63.0

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC---cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcce
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV---PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL  272 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~---~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c  272 (377)
                      ...|.|.|.++.      ....|.|+|...|++   .|..||+.|+||...         .+++++.+|+..   .|..+
T Consensus        30 ~~~C~w~I~~p~------~~~~I~l~F~~~f~le~~~C~~D~l~i~dg~~~---------~~~~l~~~CG~~---~p~~i   91 (579)
T 2qqk_A           30 HQNCEWIVYAPE------PNQKIVLNFNPHFEIEKHDCKYDFIEIRDGDSE---------SADLLGKHCGNI---APPTI   91 (579)
T ss_dssp             SCCEEEEEECSS------TTSEEEEEECSCCBCCCTTSSSSEEEEEESSST---------TSEEEEEECTTS---CCCCE
T ss_pred             CCEEEEEEEECC------CCcEEEEEEecccccccCCCCeeEEEEEeCCCC---------CcceeeeECCCC---CCCCE
Confidence            567999999832      235788888634544   488999999998652         256788999875   45678


Q ss_pred             ecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         273 EAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       273 ~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      .+.++.|.|.|.++...  .||.+.|..
T Consensus        92 ~S~~n~l~v~F~Sd~~~~~~GF~~~y~~  119 (579)
T 2qqk_A           92 ISSGSMLYIKFTSDYARQGAGFSLRYEI  119 (579)
T ss_dssp             ECSSSEEEEEEECC---CCCBCEEEEEE
T ss_pred             EecCCEEEEEEEECCCCCCCceEEEEEE
Confidence            88999999999998644  899997764

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.52  E-value=0.0013  Score=43.73  Aligned_cols=32  Identities=22%  Similarity=0.296  Sum_probs=25.3

Q ss_pred             eCCCCCCCCCCCCCeec--ccccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTLH--YQVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~~--~~~~~~~c~~~~~~~~  377 (377)
                      |.+.+ ...|.||+||+  +.+++|+|+|++||++
T Consensus         6 C~~~~-~~pC~nGG~C~~~~~~~~~~C~C~~GytG   39 (53)
T 1nql_B            6 CPLSH-DGYCLHDGVCMYIEALDKYACNCVVGYIG   39 (53)
T ss_dssp             CCSTT-CCEECTTCEEEEETTTTEEEEEECTTEES
T ss_pred             cCCCC-CCCCCCCeEEeeecCCCCEEEecCCCCcC
Confidence            44433 35688999998  7888999999999975

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=96.44  E-value=0.0019  Score=42.25  Aligned_cols=29  Identities=28%  Similarity=0.750  Sum_probs=24.4

Q ss_pred             CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|+||+|.-   .+.+.|.|++||+|..|+.
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           14 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             CcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence            4699999974   2478999999999999984

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.32  E-value=0.0013  Score=63.13  Aligned_cols=56  Identities=16%  Similarity=0.435  Sum_probs=36.6

Q ss_pred             CCCCCCeecCC----cccCCCCCC---CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCee
Q psy9819         304 KCPENRTCINN----QCVCPPRRT---GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       304 ~C~~~g~C~~g----~C~C~~G~~---G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ++..+++|++.    .|.|++||+   |..|+..   ++|...            ..|.+  +|++..++|+|.|+.||+
T Consensus         7 ~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~di---deC~~~------------~~C~~--~C~n~~g~~~C~C~~g~~   69 (400)
T 3p5b_L            7 NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQDP------------DTCSQ--LCVNLEGGYKCQCEEGFQ   69 (400)
T ss_dssp             GGGCSSEEEECSSSEEEECCTTEEECSSSCEEEC---CCCSTT------------SSCSS--CCBCCSSSCBCCCCTTCC
T ss_pred             CCCCCCEeECCCCCeEEECCCCCCcCCCCcccCc---hhhhcc------------CCCCC--ccCCCccceeeecccccc
Confidence            45556789654    799999998   7888632   333311            23443  677777777777777775

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.27  E-value=0.0026  Score=50.30  Aligned_cols=54  Identities=20%  Similarity=0.479  Sum_probs=35.4

Q ss_pred             CCCC-CeecCC---CCe-eeecCCCCccCCCCCCC--CCCCCceeecCCCcccCCCCCCCCCCCC
Q psy9819          37 KCIY-GYCKGP---PDY-SCQCELGWTGVDCSVNC--LCNNHSTCVHGIGICDECHDWTTGDHCQ   94 (377)
Q Consensus        37 ~C~~-G~C~~~---~~~-~C~C~~G~~G~~C~~~C--~C~~~g~C~~~~~~C~~C~~g~~G~~C~   94 (377)
                      ||+| |+|++.   .++ +|.|++||+|..|+++-  .|...   .-..+++ .+...++|..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g---~G~~YrG-~~~~t~sG~~Cq   62 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG---NGHFYRG-KASTDTMGRPCL   62 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS---SCTTCCS-CCCBBTTSCBBC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc---cccccee-eccccccCCccc
Confidence            6998 899764   456 99999999999999631  23211   0123455 466666666664

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.25  E-value=0.0004  Score=47.25  Aligned_cols=33  Identities=9%  Similarity=0.225  Sum_probs=24.4

Q ss_pred             eCCCCCCCCCCCCCeec--c--cccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTLH--Y--QVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~~--~--~~~~~~c~~~~~~~~  377 (377)
                      |++.+.+..|.||+||+  +  ..+.|+|+|++||++
T Consensus         7 C~~~~~~~pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G   43 (58)
T 3ltf_D            7 CPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMG   43 (58)
T ss_dssp             CCHHHHHHTSCSSCEEEEEEETTEEEEEEEECTTEES
T ss_pred             CCccccCCcCCCCCEEeCCccCCCCCEEeECCCCCcc
Confidence            55555555788888888  4  567788888888874

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=96.15  E-value=0.004  Score=40.76  Aligned_cols=29  Identities=34%  Similarity=0.786  Sum_probs=23.7

Q ss_pred             CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|+||+|.   ..+.+.|.|++||+|..|+.
T Consensus        18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCCCEEEEecCCCCeeEECCCCcccccccc
Confidence            578999997   23367899999999999984

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=96.13  E-value=0.0012  Score=59.94  Aligned_cols=52  Identities=19%  Similarity=0.388  Sum_probs=40.8

Q ss_pred             CCCCCeecCCcccCCCCCCCCCCCCC-----------CCCC-----CccCCC----ceEEeCCCC------CCCCCCC
Q psy9819         305 CPENRTCINNQCVCPPRRTGPDCQEE-----------ICPN-----ECHEFL----NHGTCDLLL------TGVHITH  356 (377)
Q Consensus       305 C~~~g~C~~g~C~C~~G~~G~~C~~~-----------~C~~-----~C~~~~----~~c~C~~g~------~G~~C~~  356 (377)
                      |+++|+|.-|+|+|.+||+|..|+-.           .|..     .|+.++    ++|.|.++|      +|.+|+|
T Consensus       198 C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~~~~~G~~~~~  275 (280)
T 2p26_A          198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEH  275 (280)
T ss_dssp             GGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTTCEEESTTSCE
T ss_pred             cCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCCeeEeeEeccc
Confidence            88899999999999999999999831           4532     366652    788998875      6778885

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=96.11  E-value=0.0026  Score=41.70  Aligned_cols=29  Identities=34%  Similarity=0.896  Sum_probs=23.7

Q ss_pred             CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|+||+|.   ..+.+.|.|++||+|..|+.
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            569999995   23467899999999999984

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=96.08  E-value=0.0019  Score=49.92  Aligned_cols=76  Identities=18%  Similarity=0.314  Sum_probs=24.3

Q ss_pred             CCCCcccCCCCCCCccCC--CCCCCCCcCcccccCC--CcceecCCCCcc---CCCccCCCCccCCCCCCCCCCCCCCCC
Q psy9819          96 CRAGSYGNATTQEGCRKC--DCNSHGNSVLGVCDSI--TGECICQDNTQG---KNCERCLPGYYGDPTDGGTCYYQCMAR  168 (377)
Q Consensus        96 C~~g~~g~~c~~~~C~~~--~C~~~g~~~~g~C~~~--~g~C~C~~g~~G---~~C~~C~~G~~g~~~~~~~C~~~C~~~  168 (377)
                      ...+|++..|+.++|...  .|.       .+|...  .+.|.|++||+|   ..|+.           .+    +|...
T Consensus        18 ~~~~~~~~~Cd~neC~~~~~~C~-------~~C~n~~g~y~C~C~~Gy~g~~g~~C~d-----------id----eC~~~   75 (107)
T 2w2n_E           18 TENLYFQGAMGTNECLDNNGGCS-------YVCNDLKIGYECLCPDGFQLVAQRRCED-----------ID----ECQDP   75 (107)
T ss_dssp             --CCCCSCCBSCCGGGTGGGGCS-------SEEECCSBSCEEECCTTCEEETTTEEEC----------------------
T ss_pred             cCCCcCCCCCcCccCcCCCCCCC-------CEeEeCCCCeEEECCCCccccCCCcccc-----------cc----ccCCC
Confidence            345677776665666531  232       156442  358888888887   44531           11    33322


Q ss_pred             CCCCCCCCCCCCCcc-cCCCCCccCC
Q psy9819         169 GMLTGPGPQGLGSGL-AERNAWEGKD  193 (377)
Q Consensus       169 g~~~~~~~~~~g~~~-~c~~G~~G~~  193 (377)
                      ..+...|.+..++|. .|++||++..
T Consensus        76 ~~C~~~C~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           76 DTCSQLCVNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             --------------------------
T ss_pred             CCcCCeeecCCCCEEEECCCCceECC
Confidence            223357888888998 8999998764

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.98  E-value=0.0018  Score=61.78  Aligned_cols=62  Identities=26%  Similarity=0.491  Sum_probs=11.4

Q ss_pred             ccCCC-CCCCCCCeecCC----cccCCCCCC----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCee
Q psy9819         298 IFSCP-DKCPENRTCINN----QCVCPPRRT----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR  368 (377)
Q Consensus       298 ~~~C~-~~C~~~g~C~~g----~C~C~~G~~----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~  368 (377)
                      +++|. +++....+|.+.    +|.|++||+    |..|+..   ++|..            ...|.++  |++..++|+
T Consensus         3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~---~eC~~------------~~~C~~~--C~~~~g~~~   65 (386)
T 3v65_B            3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDV---NECAE------------EGYCSQG--CTNSEGAFQ   65 (386)
T ss_dssp             ----------------------------------------------------------------CCTTE--EC-----CC
T ss_pred             cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCcc---ceeCC------------cCcccCc--CCCCCCCCe
Confidence            45562 333333477443    799999998    8889542   33431            1245543  777777788


Q ss_pred             eecCCCee
Q psy9819         369 CTCRQVYL  376 (377)
Q Consensus       369 c~~~~~~~  376 (377)
                      |.|+.||.
T Consensus        66 C~C~~g~~   73 (386)
T 3v65_B           66 CWCEAGYE   73 (386)
T ss_dssp             EECCTTEE
T ss_pred             EEECCCce
Confidence            88877775

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=95.97  E-value=0.0035  Score=42.92  Aligned_cols=24  Identities=21%  Similarity=0.163  Sum_probs=22.4

Q ss_pred             CCCCC--CeecccccCeeeecCCCee
Q psy9819         353 HITHG--RTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       353 ~C~~g--~~~~~~~~~~~c~~~~~~~  376 (377)
                      .|.+|  +||++.+++|+|+|++||+
T Consensus        18 PC~nga~gtC~~~~g~y~C~C~~Gy~   43 (61)
T 2k2s_B           18 PCGPEAAGTCKETNSGYICRCNQGYR   43 (61)
T ss_dssp             SSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred             CCcCCCccccccCCCceEeECCCCCc
Confidence            48898  8999999999999999997

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=95.96  E-value=0.0026  Score=51.94  Aligned_cols=51  Identities=25%  Similarity=0.553  Sum_probs=41.1

Q ss_pred             CCCCCCeecCC-------cccCCCCCCCCCCCCCCCCCCccCC---CceEEeCCCCCCCCCC
Q psy9819         304 KCPENRTCINN-------QCVCPPRRTGPDCQEEICPNECHEF---LNHGTCDLLLTGVHIT  355 (377)
Q Consensus       304 ~C~~~g~C~~g-------~C~C~~G~~G~~C~~~~C~~~C~~~---~~~c~C~~g~~G~~C~  355 (377)
                      +|+|+|+|+..       +|.|++||+|.+|+++.. ..|-..   .+++......+|..|.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~-~~C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS-CCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceecccc-ccCCCCCccccccceecCCcCCccc
Confidence            59999999543       699999999999998653 245543   5788888889999997

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=95.82  E-value=0.0053  Score=42.35  Aligned_cols=26  Identities=12%  Similarity=0.238  Sum_probs=22.5

Q ss_pred             CCCCCCCeecc-----cccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHY-----QVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~-----~~~~~~c~~~~~~~~  377 (377)
                      ..|.||++|++     .+++|+|+|++||++
T Consensus        12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G   42 (63)
T 1hae_A           12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTG   42 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEES
T ss_pred             CcCCCCcEEecCCccCCCCCEEEECCCCCcC
Confidence            35899999997     678999999999974

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=95.77  E-value=0.003  Score=45.35  Aligned_cols=34  Identities=35%  Similarity=0.721  Sum_probs=25.9

Q ss_pred             CCCcC----CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819          31 ASLCY----NKCIYGYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        31 ~~~C~----~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      ...|+    +.|+||+|.-   ...+.|.|++||+|..|+.
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHG   77 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence            35576    5899999953   2367899999999999974

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=94.51  E-value=0.027  Score=58.75  Aligned_cols=38  Identities=8%  Similarity=0.079  Sum_probs=26.8

Q ss_pred             CceEEeCCCCC---CCCCC----------CCCeecccccCeeeecCCCeeC
Q psy9819         340 LNHGTCDLLLT---GVHIT----------HGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       340 ~~~c~C~~g~~---G~~C~----------~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .+.|.|.+||.   |..|+          .+.+|++.+++|+|.|++||.+
T Consensus       332 ~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          332 GYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             SEEEECCTTCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEEC
T ss_pred             CcccCCCCCCccCCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCEe
Confidence            35566666663   44442          1348899999999999999964

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=94.37  E-value=0.0067  Score=61.45  Aligned_cols=41  Identities=12%  Similarity=0.136  Sum_probs=37.4

Q ss_pred             ccCCCCCCCCCCC-CCCCCCCccCC----CceEEeCCCCCCCCCCC
Q psy9819         316 CVCPPRRTGPDCQ-EEICPNECHEF----LNHGTCDLLLTGVHITH  356 (377)
Q Consensus       316 C~C~~G~~G~~C~-~~~C~~~C~~~----~~~c~C~~g~~G~~C~~  356 (377)
                      -.|.+||+|++|. .+.||..|+.+    .++|+|.+||.|.+|+.
T Consensus       520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CCTTCCEEEEEEEEESCSSGGGGGSEEEETTEEEECTTEESTTSCE
T ss_pred             CccCCCcccccccccCCCCcccCCCcEECCCCEeeCCCccCCCcCc
Confidence            4789999999999 58899999998    59999999999999984

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.35  E-value=0.014  Score=48.13  Aligned_cols=34  Identities=29%  Similarity=0.794  Sum_probs=21.5

Q ss_pred             CCCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          31 ASLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        31 ~~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      .+.|. +||++ |+|.+.. +|+|.|++||+|..|+.
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~  155 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY  155 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence            33444 35665 6676533 67777777777777774

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=93.72  E-value=0.0099  Score=49.13  Aligned_cols=36  Identities=28%  Similarity=0.722  Sum_probs=28.6

Q ss_pred             cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         295 TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       295 ~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      .++...| +++|.++|+|+++    +|.|++||+|.+||..
T Consensus       116 ICe~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          116 LCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             EEEECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             EEEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence            3445566 4569999999665    7999999999999975

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=93.57  E-value=0.18  Score=52.56  Aligned_cols=29  Identities=7%  Similarity=-0.023  Sum_probs=22.4

Q ss_pred             CCCCCCCCCCCCCCCCCCcc-cCCCCCccC
Q psy9819         164 QCMARGMLTGPGPQGLGSGL-AERNAWEGK  192 (377)
Q Consensus       164 ~C~~~g~~~~~~~~~~g~~~-~c~~G~~G~  192 (377)
                      +|...+.+...|.+..|+|. .|.+||+..
T Consensus       354 eC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~  383 (791)
T 3m0c_C          354 ECQDPDTCSQLCVNLEGGYKCQCEEGFQLD  383 (791)
T ss_dssp             CCSSSSSCTTTCCBCSSCBCCCCCSSEECC
T ss_pred             ccCCCCCCCCeeecCCCCceeecCCCCEeC
Confidence            55544556678889999999 999999864

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.18  E-value=0.068  Score=34.82  Aligned_cols=26  Identities=27%  Similarity=0.715  Sum_probs=20.4

Q ss_pred             CCCCCCCeec--CC----cccCCCCCCCCCCCC
Q psy9819         303 DKCPENRTCI--NN----QCVCPPRRTGPDCQE  329 (377)
Q Consensus       303 ~~C~~~g~C~--~g----~C~C~~G~~G~~C~~  329 (377)
                      +.|.| |+|.  ..    .|+|++||+|.+||.
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            34886 6994  33    699999999999985

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=93.13  E-value=0.038  Score=55.28  Aligned_cols=32  Identities=34%  Similarity=0.932  Sum_probs=26.6

Q ss_pred             CcC-CCCCC-CeecC--CCCeeeecC-CCCccCCCCC
Q psy9819          33 LCY-NKCIY-GYCKG--PPDYSCQCE-LGWTGVDCSV   64 (377)
Q Consensus        33 ~C~-~~C~~-G~C~~--~~~~~C~C~-~G~~G~~C~~   64 (377)
                      .|. +||+| |+|+.  .++|.|.|+ +||+|..|+.
T Consensus         3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            354 79998 79994  358999999 9999999995

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=93.02  E-value=0.037  Score=55.17  Aligned_cols=32  Identities=31%  Similarity=0.950  Sum_probs=27.0

Q ss_pred             CcC-CCCCC-CeecC--CCCeeeecC-CCCccCCCCC
Q psy9819          33 LCY-NKCIY-GYCKG--PPDYSCQCE-LGWTGVDCSV   64 (377)
Q Consensus        33 ~C~-~~C~~-G~C~~--~~~~~C~C~-~G~~G~~C~~   64 (377)
                      .|. +||+| |+|.+  .++|+|.|+ +||+|.+|++
T Consensus         4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             cCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence            454 79998 89986  348999999 9999999995

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.44  E-value=0.031  Score=55.72  Aligned_cols=32  Identities=28%  Similarity=0.779  Sum_probs=27.3

Q ss_pred             cCC-CCCCCCCCeecC-C----cccCC-CCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCIN-N----QCVCP-PRRTGPDCQEE  330 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~-g----~C~C~-~G~~G~~C~~~  330 (377)
                      ++| +++|+|+|+|++ +    .|.|+ +||+|.+||+.
T Consensus         3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   41 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence            456 467999999977 4    79999 99999999974

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=91.94  E-value=0.061  Score=35.24  Aligned_cols=23  Identities=30%  Similarity=0.440  Sum_probs=20.1

Q ss_pred             CCCCCCCeecccccCeeeecCCCee
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ..|.+  +|++.+++|+|.|++||+
T Consensus        20 ~~C~~--~C~n~~Gsy~C~C~~Gy~   42 (53)
T 1apq_A           20 PQCQH--LCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             CTTSS--EEEEETTEEEEECSTTCE
T ss_pred             CCCCC--EeECCCCCeEEECCCCCe
Confidence            35764  999999999999999996

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=91.82  E-value=0.071  Score=43.28  Aligned_cols=28  Identities=25%  Similarity=0.819  Sum_probs=23.2

Q ss_pred             CCCC-CeecCC---CCe-eeecCCCCccCCCCC
Q psy9819          37 KCIY-GYCKGP---PDY-SCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~~-G~C~~~---~~~-~C~C~~G~~G~~C~~   64 (377)
                      ||+| |+|+..   ..+ +|.|++||.|..|++
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei   46 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   46 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence            6998 889754   345 899999999999986

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=91.58  E-value=0.1  Score=49.77  Aligned_cols=48  Identities=29%  Similarity=0.719  Sum_probs=31.4

Q ss_pred             CeecC-CCCeeeecCCCCc---cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819          41 GYCKG-PPDYSCQCELGWT---GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTTGD   91 (377)
Q Consensus        41 G~C~~-~~~~~C~C~~G~~---G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~G~   91 (377)
                      ++|++ +++|+|.|++||+   |..|+.  +|    +|.+  +|.  .+++.| .|.+||.+.
T Consensus        12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C-~C~~g~~~~   71 (400)
T 3p5b_L           12 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKC-QCEEGFQLD   71 (400)
T ss_dssp             SEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBC-CCCTTCCCC
T ss_pred             CEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceee-ecccccccc
Confidence            58886 4589999999999   777763  23    2322  454  345667 566666543

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.34  E-value=0.032  Score=45.66  Aligned_cols=36  Identities=22%  Similarity=0.695  Sum_probs=28.2

Q ss_pred             cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         295 TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       295 ~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      -++...| .++|.++|+|.++    .|.|.+||+|.+||+.
T Consensus       116 ICe~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~  156 (157)
T 1g1t_A          116 LCYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI  156 (157)
T ss_dssp             EEEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred             EeCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence            3445566 3569999999766    7999999999999875

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=91.25  E-value=0.022  Score=53.52  Aligned_cols=35  Identities=29%  Similarity=0.728  Sum_probs=30.0

Q ss_pred             cccccCCCCCCCCCCeecCCcccCCCCCCCCC--CCC
Q psy9819         295 TYQIFSCPDKCPENRTCINNQCVCPPRRTGPD--CQE  329 (377)
Q Consensus       295 ~~~~~~C~~~C~~~g~C~~g~C~C~~G~~G~~--C~~  329 (377)
                      -|-...|++.|++||.|+.++|.|.+||.|.+  |..
T Consensus       188 vyIg~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~  224 (387)
T 2ddu_A          188 VYISEPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVS  224 (387)
T ss_dssp             CEEESCCGGGGGGSEEEETTEEEECTTEEEETTEEEE
T ss_pred             EEecccCccccCCCceecCCeEEecCCcccCCCcccc
Confidence            34456799999999999999999999999976  764

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=91.22  E-value=0.1  Score=33.97  Aligned_cols=15  Identities=20%  Similarity=0.328  Sum_probs=7.1

Q ss_pred             eEEeCCCCCCCCCCC
Q psy9819         342 HGTCDLLLTGVHITH  356 (377)
Q Consensus       342 ~c~C~~g~~G~~C~~  356 (377)
                      .|.|.+||+|.+|++
T Consensus        31 ~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           31 ACVCHSGYVGARCEH   45 (50)
T ss_pred             EEECCCCCcccCCCc
Confidence            344444444444443

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=91.13  E-value=0.054  Score=54.19  Aligned_cols=32  Identities=22%  Similarity=0.754  Sum_probs=26.9

Q ss_pred             cCC-CCCCCCCCeecC-C----cccCC-CCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCIN-N----QCVCP-PRRTGPDCQEE  330 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~-g----~C~C~-~G~~G~~C~~~  330 (377)
                      ++| +++|.|+|+|++ +    .|.|+ +||+|.+||.+
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   40 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence            567 567999999973 2    79999 99999999974

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=90.92  E-value=0.037  Score=52.54  Aligned_cols=53  Identities=26%  Similarity=0.736  Sum_probs=14.2

Q ss_pred             CCCCeecCCC-CeeeecCCCCc----cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCC----CCCCC
Q psy9819          38 CIYGYCKGPP-DYSCQCELGWT----GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTT----GDHCQ   94 (377)
Q Consensus        38 C~~G~C~~~~-~~~C~C~~G~~----G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~----G~~C~   94 (377)
                      |.| +|.++. +|+|.|++||+    |..|+.  +|    +|.+  .|.  .+++.| .|.+||.    |..|+
T Consensus        13 c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C-~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           13 CAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQC-WCEAGYELRPDRRSCK   82 (386)
T ss_dssp             ----------------------------------------CCTT--EEC-----CCE-ECCTTEEECTTSSCEE
T ss_pred             CCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeE-EECCCceEcCCCCeEC
Confidence            554 787544 69999999999    888963  34    3432  265  456788 6888887    66664

>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*

Probab=90.34  E-value=0.089  Score=48.67  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=34.4

Q ss_pred             CCCCCCCc-eeecCC--CcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819          65 NCLCNNHS-TCVHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQ  107 (377)
Q Consensus        65 ~C~C~~~g-~C~~~~--~~C~~C~~g~~G~~C~~C~~g~~g~~c~~  107 (377)
                      .|.|++|+ .|...+  ++| .|.++++|.+||.|.++|.+.....
T Consensus       269 ~C~CnGHA~~C~~~~g~~~C-~C~HnT~G~~Ce~C~p~y~~~pw~p  313 (338)
T 3tbd_A          269 RCKCNLHANLCSMREGSLQC-ECEHNTTGPDCGKCKKNFRTRSWRA  313 (338)
T ss_dssp             EECCTTBCSCEEEETTEEEE-CCCTTEESTTSCEECTTCBSSCCCC
T ss_pred             cccccCCcCccCCCCCCcee-cCCCCCCCCCCcccCccccCCCCCC
Confidence            46788887 688544  469 8999999999999999999886553

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.00  E-value=0.17  Score=36.19  Aligned_cols=24  Identities=21%  Similarity=0.409  Sum_probs=12.8

Q ss_pred             CCCCCCCeec--ccccCeeeecCCCee
Q psy9819         352 VHITHGRTLH--YQVDLIRCTCRQVYL  376 (377)
Q Consensus       352 ~~C~~g~~~~--~~~~~~~c~~~~~~~  376 (377)
                      .+|.|| +|+  ...+.+.|+|..+|+
T Consensus        46 ~yClnG-~C~~i~~~~~~~C~C~~GYt   71 (79)
T 1xdt_R           46 DFCIHG-ECKYVKELRAPSCICHPGYH   71 (79)
T ss_dssp             TCCSSE-EECCBGGGTBCCEEECTTEE
T ss_pred             CcCCCC-EeeeecCCCCeEEEcCCCcc
Confidence            455565 553  333455666666665

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=89.94  E-value=0.13  Score=34.11  Aligned_cols=21  Identities=19%  Similarity=0.472  Sum_probs=18.4

Q ss_pred             CCCCCeecccccCeeeecCCCee
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      |++  .|++.+++|+|.|++||.
T Consensus        11 C~~--~C~nt~Gsy~C~C~~Gy~   31 (55)
T 2jkh_L           11 CDQ--FCHEEQNSVVCSCARGYT   31 (55)
T ss_dssp             CSS--EEEEETTEEEEECCTTEE
T ss_pred             cCc--EeEcCCCCeEEeCCCCCE
Confidence            665  899999999999999995

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=89.79  E-value=0.19  Score=32.65  Aligned_cols=31  Identities=13%  Similarity=0.223  Sum_probs=19.2

Q ss_pred             eCCCCCCCCCCCCCeec--ccccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTLH--YQVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~~--~~~~~~~c~~~~~~~~  377 (377)
                      |++.+. .+|.| ++|.  ...+.+.|+|+.+|++
T Consensus         8 C~~~~~-~yC~n-G~C~~~~~~~~~~C~C~~gy~G   40 (50)
T 1iox_A            8 CPKQYK-HYCIK-GRCRFVVAEQTPSCVCDEGYIG   40 (50)
T ss_dssp             CCGGGT-TSCTT-CCEEEETTTTEEEECCCTTEET
T ss_pred             cChhhc-CcccC-CEEEeEcCCCCeEEECCCCccc
Confidence            455554 66777 4665  4455677777777764

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=89.33  E-value=0.18  Score=41.47  Aligned_cols=28  Identities=32%  Similarity=0.987  Sum_probs=14.4

Q ss_pred             CCC-CCeecCC-CCeeeecCCCCccCCCCC
Q psy9819          37 KCI-YGYCKGP-PDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        37 ~C~-~G~C~~~-~~~~C~C~~G~~G~~C~~   64 (377)
                      +|+ +|+|... .+|+|.|++||+|..|+.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~  155 (164)
T 3cfw_A          126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF  155 (164)
T ss_dssp             SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred             cCCCCCeecccCCCceeeeCCCcccccccc
Confidence            454 3555532 245566666666655553

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=89.24  E-value=0.17  Score=32.95  Aligned_cols=24  Identities=25%  Similarity=0.670  Sum_probs=18.9

Q ss_pred             CCCCCCeecC-CCCeeeecCCCCccC
Q psy9819          36 NKCIYGYCKG-PPDYSCQCELGWTGV   60 (377)
Q Consensus        36 ~~C~~G~C~~-~~~~~C~C~~G~~G~   60 (377)
                      .+|+| +|++ +++|+|.|++||++.
T Consensus        20 ~~C~~-~C~n~~Gsy~C~C~~Gy~~~   44 (53)
T 1apq_A           20 PQCQH-LCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             CTTSS-EEEEETTEEEEECSTTCEEC
T ss_pred             CCCCC-EeECCCCCeEEECCCCCeEC
Confidence            35764 8986 458999999999963

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=87.94  E-value=0.14  Score=33.35  Aligned_cols=22  Identities=18%  Similarity=0.448  Sum_probs=18.2

Q ss_pred             CCCCCCeecccccCeeeecCCCee
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      .|++  .|++.+++|+|.|++||.
T Consensus         7 ~C~~--~C~n~~gs~~C~C~~Gy~   28 (51)
T 1kig_L            7 GCDQ--FCREERSEVRCSCAHGYV   28 (51)
T ss_dssp             SSSS--CCCEETTEECCCCCTTEE
T ss_pred             CcCC--EeEcCCCCeEEeCCCCcE
Confidence            3665  688999999999999985

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=86.85  E-value=0.2  Score=45.20  Aligned_cols=67  Identities=30%  Similarity=0.807  Sum_probs=37.3

Q ss_pred             CCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccC----CCCCCCCCcCcccccCCCcceecCCCC----
Q psy9819          68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRK----CDCNSHGNSVLGVCDSITGECICQDNT----  139 (377)
Q Consensus        68 C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~----~~C~~~g~~~~g~C~~~~g~C~C~~g~----  139 (377)
                      |+++|+|.-  ++| .|.+||.|..|+ |+..-....-....|..    ..|+++|     .|.  -|+|.|.+.|    
T Consensus       198 C~g~G~~~C--G~C-~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG-----~C~--CG~C~C~~~~~~~~  266 (280)
T 2p26_A          198 CHGKGFLEC--GIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG-----DCV--CGQCLCHTSDVPGK  266 (280)
T ss_dssp             GGGSEEEET--TEE-EECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSE-----EEE--TTEEEECCCSSTTC
T ss_pred             cCCCCeECC--Cce-eCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCc-----eEe--CCeeECcCCCCCCe
Confidence            556666653  678 788999999885 44321100000002332    1366655     665  5789997775    


Q ss_pred             --ccCCCc
Q psy9819         140 --QGKNCE  145 (377)
Q Consensus       140 --~G~~C~  145 (377)
                        .|.+|+
T Consensus       267 ~~~G~~~~  274 (280)
T 2p26_A          267 LIYGQYCE  274 (280)
T ss_dssp             EEESTTSC
T ss_pred             eEeeEecc
Confidence              455554

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=86.36  E-value=0.21  Score=49.52  Aligned_cols=67  Identities=21%  Similarity=0.479  Sum_probs=46.8

Q ss_pred             CCCCceeecCCCcccCCCCCCC--CCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCcc
Q psy9819          68 CNNHSTCVHGIGICDECHDWTT--GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG  141 (377)
Q Consensus        68 C~~~g~C~~~~~~C~~C~~g~~--G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G  141 (377)
                      |+..|....-.|.| .|.+||.  +..|+.|++||+........|.+|+-+...      -......|.|..+|.-
T Consensus       252 C~~dG~w~~p~G~C-~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s------~~~Gs~~C~C~ng~~r  320 (536)
T 3fl7_A          252 CAVDGEWLVPIGQC-LCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP------SPEGATSCECEEGFFR  320 (536)
T ss_dssp             ECTTSCBCCCBCCC-EECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC------CCTTCSSCEECTTCBC
T ss_pred             EcCCCCEecccCcE-eccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC------CCCCccEEEEeccccc
Confidence            55566665557899 7999997  677889999999887666778765543221      1122458888888753

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=85.80  E-value=0.19  Score=40.82  Aligned_cols=27  Identities=33%  Similarity=1.035  Sum_probs=14.8

Q ss_pred             CCCC-CeecC-CCCeeeecCCCCccCCCC
Q psy9819          37 KCIY-GYCKG-PPDYSCQCELGWTGVDCS   63 (377)
Q Consensus        37 ~C~~-G~C~~-~~~~~C~C~~G~~G~~C~   63 (377)
                      ||++ |+|.+ ...|.|.|.+||+|..|+
T Consensus       126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce  154 (157)
T 1g1t_A          126 SCSGHGECVETINNYTCKCDPGFSGLKCE  154 (157)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CCCCCCEeecCCCCeeEECCCCccCcccc
Confidence            4543 55643 225566666666666665

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=85.43  E-value=0.33  Score=34.02  Aligned_cols=18  Identities=6%  Similarity=-0.138  Sum_probs=15.1

Q ss_pred             CCCCCCeecccccCeeee
Q psy9819         353 HITHGRTLHYQVDLIRCT  370 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~  370 (377)
                      .|.++++|+|.+++|+|.
T Consensus        12 ~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A           12 ACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             SCTTEEEEEETTCCEEEE
T ss_pred             CCCCCCEeECCCCCeEec
Confidence            577778888889999988

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=85.31  E-value=0.37  Score=31.61  Aligned_cols=21  Identities=14%  Similarity=0.283  Sum_probs=17.3

Q ss_pred             CCCCCeeccccc-CeeeecCCCee
Q psy9819         354 ITHGRTLHYQVD-LIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~~-~~~c~~~~~~~  376 (377)
                      |++  .|++.++ +|+|.|++||.
T Consensus         9 C~~--~C~n~~ggs~~C~C~~Gy~   30 (53)
T 2bz6_L            9 CEQ--YCSDHTGTKRSCRCHEGYS   30 (53)
T ss_dssp             CSS--EEEEETTTEEEEECCTTEE
T ss_pred             cCC--EeEcCCCCCEEeeCCCCCE
Confidence            666  6888888 79999999985

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=82.60  E-value=0.65  Score=31.18  Aligned_cols=21  Identities=14%  Similarity=0.403  Sum_probs=15.5

Q ss_pred             CCCCCeecccc-cCeeeecCCCee
Q psy9819         354 ITHGRTLHYQV-DLIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~-~~~~c~~~~~~~  376 (377)
                      |+|  .|++.+ ++|+|.|++||.
T Consensus         9 C~~--~C~n~~~gs~~C~C~~Gy~   30 (59)
T 2wph_E            9 CEQ--FCKNSADNKVVCSCTEGYR   30 (59)
T ss_dssp             CSS--EEEECSTTCEEEECCTTEE
T ss_pred             cCC--EeEeCCCCCEEeeCCCCcE
Confidence            555  677777 488888888875

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=81.76  E-value=0.56  Score=44.00  Aligned_cols=29  Identities=34%  Similarity=0.813  Sum_probs=23.4

Q ss_pred             CCcCCCC-CCCeecCCCCeeeecCCCCccCC--CC
Q psy9819          32 SLCYNKC-IYGYCKGPPDYSCQCELGWTGVD--CS   63 (377)
Q Consensus        32 ~~C~~~C-~~G~C~~~~~~~C~C~~G~~G~~--C~   63 (377)
                      +.||+.| .||.|+.   .+|.|++||.|.+  |.
T Consensus       192 ~~Cp~~CsGhG~C~~---g~C~Cd~G~~g~d~~C~  223 (387)
T 2ddu_A          192 EPCPSYCSGHGDCIS---GVCFCDLGYTAAQGTCV  223 (387)
T ss_dssp             SCCGGGGGGSEEEET---TEEEECTTEEEETTEEE
T ss_pred             ccCccccCCCceecC---CeEEecCCcccCCCccc
Confidence            4699999 4899984   4899999999964  55

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=81.34  E-value=0.64  Score=32.34  Aligned_cols=21  Identities=14%  Similarity=0.283  Sum_probs=17.5

Q ss_pred             CCCCCeeccccc-CeeeecCCCee
Q psy9819         354 ITHGRTLHYQVD-LIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~~-~~~c~~~~~~~  376 (377)
                      |++  .|++.++ +|+|.|++||.
T Consensus        15 C~h--~C~n~~g~s~~C~C~~Gy~   36 (69)
T 1kli_L           15 CEQ--YCSDHTGTKRSCRCHEGYS   36 (69)
T ss_dssp             CSS--EEEEETTTEEEEECCTTEE
T ss_pred             cCC--EeEcCCCCCEEEeCCCCCe
Confidence            566  7888888 79999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	377
d1kloa2	56	g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M	9e-10
d1kloa2	56	g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M	2e-07
d1kloa3	51	g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (	6e-08
d1kloa1	55	g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu	4e-06
d1kloa1	55	g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu	8e-06

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.8 bits (124), Expect = 9e-10
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 113 CDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
           C CN + + + +G C+ +TGEC+ C  NT G  C+RC  G++G+P      
Sbjct: 1   CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPA 51

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.3 bits (107), Expect = 2e-07
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query: 61  DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
            C+ N   N    C    G C +C   T G +C  C+ G +GN        KC
Sbjct: 2   QCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.4 bits (110), Expect = 6e-08
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 113 CDCNSHG-NSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
           C CN +G       C+ +TG+C C  +  G++C  C PGYY   +  G
Sbjct: 1   CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQG 48

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (97), Expect = 4e-06
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 66  CLCNNHSTCVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKC 113
           C C   S+C         +C  C   T G  C+ C  G +G+     G  R C
Sbjct: 1   CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.7 bits (95), Expect = 8e-06
 Identities = 15/53 (28%), Positives = 18/53 (33%)

Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
           C C    +  +           C   T GK CE C  GY+GDP         C
Sbjct: 1   CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	377
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.25
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.2
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.19
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.16
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.16
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	98.13
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.12
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.1
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.07
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.05
d1sppb_	112	Major seminal plasma glycoprotein PSP-II {Pig (Sus	98.04
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.03
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.99
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.98
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.98
d2qqma3	108	Mannose-binding protein associated serine protease	97.95
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.93
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.92
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.91
d1sppa_	109	Major seminal plasma glycoprotein PSP-I {Pig (Sus	97.83
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.82
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.81
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.76
d1sfpa_	111	Acidic seminal fluid protein (ASFP) {Cow (Bos taur	97.76
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.76
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.67
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.65
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.61
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.58
d1nt0a2	114	Mannose-binding protein associated serine protease	97.57
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.56
d1szba1	121	Mannose-binding protein associated serine protease	97.5
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.49
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	97.39
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.38
d1nzia1	117	Complement C1S component {Human (Homo sapiens) [Ta	97.29
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.27
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.26
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	97.23
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.17
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	97.14
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.11
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	97.1
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	97.05
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	96.92
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.46
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.02
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.87
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	95.83
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	95.7
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.68
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.56
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.53
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	95.5
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.5
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	95.39
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	95.37
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.36
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.27
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.23
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	95.02
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	94.99
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.98
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.69
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	94.47
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	94.45
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	94.28
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	94.25
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	93.87
d1nt0a3	45	Mannose-binding protein associated serine protease	93.87
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.78
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.76
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.7
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.56
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	92.96
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	92.42
d1szba2	45	Mannose-binding protein associated serine protease	92.3
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.16
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	91.97
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	91.67
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	90.02
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	89.96
d1nt0a3	45	Mannose-binding protein associated serine protease	87.64
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	87.61
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	86.82
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	84.72
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	80.04

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.4e-07  Score=56.19  Aligned_cols=33  Identities=33%  Similarity=0.869  Sum_probs=27.3

Q ss_pred             CCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          32 SLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        32 ~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      ..|. +||+| |+|++.. +|+|.|++||+|..|++
T Consensus         2 d~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             cCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            3454 69998 8999644 89999999999999985

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.8e-07  Score=56.77  Aligned_cols=33  Identities=30%  Similarity=0.966  Sum_probs=28.0

Q ss_pred             ccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         298 IFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       298 ~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      +++| +++|.|+|+|++.    +|.|++||+|.+||++
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~d   38 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN   38 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCeeC
Confidence            4677 5679999999665    7999999999999974

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.7e-07  Score=55.46  Aligned_cols=34  Identities=35%  Similarity=0.994  Sum_probs=27.6

Q ss_pred             CCCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          31 ASLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        31 ~~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      ...|. +||+| |+|++.. +|+|.|++||+|+.|++
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCCC
Confidence            34555 69998 8998643 89999999999999974

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.9e-07  Score=55.26  Aligned_cols=31  Identities=23%  Similarity=0.713  Sum_probs=26.8

Q ss_pred             CC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         300 SC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       300 ~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      +| +++|.|+|+|++.    +|.|++||+|.+||+.
T Consensus         2 ~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei~   37 (39)
T d1xkba1           2 QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF   37 (39)
T ss_dssp             TTTTCCCCSSCEECCCSSSCCEECCTTEETTTTCEE
T ss_pred             cCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCeEc
Confidence            56 4679999999765    7999999999999975

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=4.3e-07  Score=55.11  Aligned_cols=33  Identities=24%  Similarity=0.713  Sum_probs=27.7

Q ss_pred             cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819         297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQE  329 (377)
Q Consensus       297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~  329 (377)
                      ++++| +++|.|+|+|++.    +|.|++||+|.+||+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCCC
Confidence            35678 5779999999654    799999999999985

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=4.2e-07  Score=60.10  Aligned_cols=40  Identities=30%  Similarity=0.585  Sum_probs=32.6

Q ss_pred             eeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccC
Q psy9819          73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRK  112 (377)
Q Consensus        73 ~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~  112 (377)
                      .|++.+++|+.|+++++|.+|++|++||||..-....|.+
T Consensus        14 ~Cd~~tG~C~~C~~nt~G~~Cd~C~~G~yg~~~~~~~C~~   53 (56)
T d1kloa2          14 NCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADK   53 (56)
T ss_dssp             CBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGS
T ss_pred             ccCCCCCCCCCCCCCCCCCCcCcccCCcccCCCCCCCCCC
Confidence            5888899995699999999999999999997544344443

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=6.1e-07  Score=54.37  Aligned_cols=29  Identities=34%  Similarity=0.965  Sum_probs=25.7

Q ss_pred             CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|++.. +|+|.|++||+|..|++
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           6 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             CCCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             CCCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            79998 8999754 89999999999999985

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.10  E-value=4.9e-07  Score=54.18  Aligned_cols=32  Identities=31%  Similarity=0.812  Sum_probs=26.3

Q ss_pred             CCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCC
Q psy9819          32 SLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCS   63 (377)
Q Consensus        32 ~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~   63 (377)
                      ..|. +||+| |+|+... +|+|+|++||+|..|+
T Consensus         3 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           3 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             ccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            3454 79998 8998643 8999999999999986

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=9.1e-07  Score=52.27  Aligned_cols=28  Identities=32%  Similarity=0.944  Sum_probs=24.7

Q ss_pred             CCCCC-CeecCCC-CeeeecCCCCccCCCC
Q psy9819          36 NKCIY-GYCKGPP-DYSCQCELGWTGVDCS   63 (377)
Q Consensus        36 ~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~   63 (377)
                      +||+| |+|++.. +|+|.|++||+|..|+
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           6 SPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            79998 8999654 8999999999999986

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=8.3e-07  Score=56.27  Aligned_cols=33  Identities=33%  Similarity=0.771  Sum_probs=28.3

Q ss_pred             CCcC-CCCCCCeecCCC-CeeeecCCCCccCCCCC
Q psy9819          32 SLCY-NKCIYGYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        32 ~~C~-~~C~~G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      +.|. +||+||+|++.. +|+|.|++||+|..|++
T Consensus         9 ~~C~~~PC~nG~C~~~~~~y~C~C~~G~~G~~Ce~   43 (48)
T d1autl1           9 HPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQR   43 (48)
T ss_dssp             CSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCE
T ss_pred             CcccCCCCCCCEEECCCCCCeEeCCCCCcCCCccc
Confidence            4565 699999999644 89999999999999985

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.04  E-value=8e-07  Score=67.94  Aligned_cols=81  Identities=22%  Similarity=0.459  Sum_probs=64.9

Q ss_pred             CCCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceec
Q psy9819         195 PSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEA  274 (377)
Q Consensus       195 p~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~  274 (377)
                      |..+|.|.|.+       +++.+|+|+|. .++++|..|++.|+||...          ...++.+|+..    +....+
T Consensus        26 P~~~C~W~I~~-------p~~~~I~l~f~-~f~~~C~~d~l~I~dg~~~----------~~~l~~~Cg~~----~~~~~S   83 (112)
T d1sppb_          26 QKNLCTWTILM-------KPDQKVRMAIP-YLNLACGKEYVEVFDGLLS----------GPSYGKLCAGA----AIVFLS   83 (112)
T ss_dssp             CCSEEEEEEEC-------CTTCEEEEEEE-EEECCBTTEEEEEESSSTT----------SCEEEEESEEE----EEEEEC
T ss_pred             CCCceEEEEec-------CCcEEEEEEEE-ehhcccccceeEEEeccCc----------ceeeeeecCCC----Cccccc
Confidence            35679999999       56779999998 8889999999999997641          35678888753    456888


Q ss_pred             CCCeeEeccCCCCCC--CCCccccc
Q psy9819         275 KSGVMTIHYKQGKPS--EGFNATYQ  297 (377)
Q Consensus       275 ~sG~~~v~~~s~~c~--~GF~g~~~  297 (377)
                      .++.+.|.|.++...  .||.+.|.
T Consensus        84 ~sn~l~v~f~s~~~~~~~GF~~~y~  108 (112)
T d1sppb_          84 TANTMTIKYNRISGNSSSPFLIYFY  108 (112)
T ss_dssp             SSSEEEEEEEESSCSCCCCCEEEEE
T ss_pred             cccEEEEEEEECCCCCCCCEEEEEE
Confidence            999999999887654  88988654

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.03  E-value=4.6e-07  Score=54.29  Aligned_cols=31  Identities=26%  Similarity=0.775  Sum_probs=26.2

Q ss_pred             ccCC-CCCCCCCCeecCC----cccCCCCCCCCCCC
Q psy9819         298 IFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQ  328 (377)
Q Consensus       298 ~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~  328 (377)
                      +++| +++|.|+|+|++.    +|+|++||+|.+||
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            4667 5679999999654    79999999999997

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1e-06  Score=52.07  Aligned_cols=29  Identities=41%  Similarity=0.999  Sum_probs=24.9

Q ss_pred             CC-CCCCCCCCeecCC----cccCCCCCCCCCCC
Q psy9819         300 SC-PDKCPENRTCINN----QCVCPPRRTGPDCQ  328 (377)
Q Consensus       300 ~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~  328 (377)
                      +| +++|.|+|+|++.    +|+|++||+|.+||
T Consensus         2 ~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           2 ECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             TTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            46 5679999999665    79999999999997

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.9e-06  Score=52.88  Aligned_cols=31  Identities=32%  Similarity=0.988  Sum_probs=26.1

Q ss_pred             CCCCCC-CeecCC---CCeeeecCCCCccCCCCCC
Q psy9819          35 YNKCIY-GYCKGP---PDYSCQCELGWTGVDCSVN   65 (377)
Q Consensus        35 ~~~C~~-G~C~~~---~~~~C~C~~G~~G~~C~~~   65 (377)
                      ++||+| |+|+..   ..|+|.|++||+|..|+++
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~   37 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID   37 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBC
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcC
Confidence            379999 899852   3799999999999999963

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=9.1e-07  Score=58.15  Aligned_cols=41  Identities=29%  Similarity=0.809  Sum_probs=33.6

Q ss_pred             CCCCCCceee----cCCCcccCCCCCCCCCCCCCCCCCcccCCCC
Q psy9819          66 CLCNNHSTCV----HGIGICDECHDWTTGDHCQYCRAGSYGNATT  106 (377)
Q Consensus        66 C~C~~~g~C~----~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~  106 (377)
                      |+|+++++|.    ...++|+.|+++|+|.+||.|.+||+|....
T Consensus         1 CpC~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~P~~   45 (55)
T d1kloa1           1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLG   45 (55)
T ss_dssp             CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTC
T ss_pred             CcCcCCCccceeCCCCCEEcCCCCCCCccCcccccCCccccCccc
Confidence            5678888765    3456786799999999999999999998654

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.5e-06  Score=63.46  Aligned_cols=81  Identities=26%  Similarity=0.603  Sum_probs=61.2

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM  265 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~  265 (377)
                      ...|.|.|.+       +.+..|+|+|. .+++          .|..|++.|+||....         ..+++.+|+.. 
T Consensus        15 ~~~C~w~I~~-------p~~~~I~l~f~-~f~l~~~~~~~~~~~C~~D~l~i~dg~~~~---------~~~~~~~Cg~~-   76 (108)
T d2qqma3          15 SLECTYIVFA-------PKMSEIILEFE-SFDLEPDSNPPGGMFCRYDRLEIWDGFPDV---------GPHIGRYCGQK-   76 (108)
T ss_dssp             SCEEEEEEEC-------GGGCCEEEEEE-EEECCCC----CCCSSCSSEEEEESSSTTT---------SCEEEEECTTC-
T ss_pred             CCeEEEEEEe-------CCCceeeeEEE-EEEeecccccccCCCccccEEEEEeccccC---------CccccEEeecc-
Confidence            5679999999       44568888876 3332          3888999999976532         56778899765 


Q ss_pred             cCCCcceecCCCeeEeccCCCCCC--CCCcccc
Q psy9819         266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATY  296 (377)
Q Consensus       266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~  296 (377)
                        .|..+.+.++.+.|.|.++...  .||.+.|
T Consensus        77 --~p~~~~S~~n~l~i~F~Sd~~~~~~GF~~~y  107 (108)
T d2qqma3          77 --TPGRIRSSSGILSMVFYTDSAIAKEGFSANY  107 (108)
T ss_dssp             --CCCEEEECSSEEEEEEECCSSCCCCEEEEEE
T ss_pred             --CCCCEEEcCCEEEEEEEECCCCCCCCEEEEE
Confidence              4567899999999999987654  7887755

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.2e-06  Score=54.21  Aligned_cols=33  Identities=33%  Similarity=0.887  Sum_probs=27.5

Q ss_pred             cccCC---CCCCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819         297 QIFSC---PDKCPENRTCINN----QCVCPPRRTGPDCQE  329 (377)
Q Consensus       297 ~~~~C---~~~C~~~g~C~~g----~C~C~~G~~G~~C~~  329 (377)
                      ++++|   +++|.++|+|++.    +|.|++||+|.+||+
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCE
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCcC
Confidence            35667   3679999999665    799999999999986

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.5e-06  Score=52.67  Aligned_cols=29  Identities=38%  Similarity=0.944  Sum_probs=25.2

Q ss_pred             CCCCC-CeecCC-CCeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|++. ++|+|.|++||+|..|++
T Consensus        11 ~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1          11 NPCEHAGKCINTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSCE
T ss_pred             CCCCCCcEeECCCCCEEeECCCCCcCCCCcC
Confidence            68987 899964 489999999999999984

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.1e-06  Score=52.63  Aligned_cols=30  Identities=27%  Similarity=0.718  Sum_probs=25.4

Q ss_pred             CCCCCCCCeecCC------cccCCCCCCCCCCCCCC
Q psy9819         302 PDKCPENRTCINN------QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       302 ~~~C~~~g~C~~g------~C~C~~G~~G~~C~~~~  331 (377)
                      +++|+|+|+|++.      +|.|++||+|.+||+++
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~   38 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   38 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCc
Confidence            4679999999531      69999999999999864

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.83  E-value=2.7e-06  Score=64.51  Aligned_cols=81  Identities=27%  Similarity=0.630  Sum_probs=64.0

Q ss_pred             CCCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceec
Q psy9819         195 PSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEA  274 (377)
Q Consensus       195 p~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~  274 (377)
                      |..+|.|.|.+       +++.+|+|+|. .++.+|..|++.|+||...          ....+.+|+.     +....+
T Consensus        23 P~~~C~W~I~~-------p~g~~I~l~f~-~f~~~c~~d~l~i~~g~~~----------~~~~~~~c~~-----~~~~~s   79 (109)
T d1sppa_          23 PKTECVWTLQV-------DPKYKLLVSIP-TLNLTCGKEYVEVLEGAPG----------SKSLGKFCEG-----LSILNR   79 (109)
T ss_dssp             SCSEEEEEEEC-------CTTSEEEEEEE-EEECCTTTEEEEEESSSTT----------SCEEEEESEE-----EEEEEE
T ss_pred             CCCcEEEEEEE-------ccCceeEEEEe-ccccccceeeeeeecCCCc----------cceeeeecCC-----ccccee
Confidence            35679999999       66789999998 8889999999999997542          3455677754     356788


Q ss_pred             CCCeeEeccCCCCCC--CCCcccccc
Q psy9819         275 KSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       275 ~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      .++.++|.|+++...  .||.+.|..
T Consensus        80 ~~n~~~i~F~Sd~~~~~~GF~~~y~~  105 (109)
T d1sppa_          80 GSSGMTVKYKRDSGHPASPYEIIFLR  105 (109)
T ss_dssp             ECTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred             ccceEEEEEEECCCCCCCCEEEEEEE
Confidence            889999999888654  999987643

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6.9e-07  Score=54.19  Aligned_cols=32  Identities=25%  Similarity=0.825  Sum_probs=26.4

Q ss_pred             cCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      +.| +++|.|+|+|++.    +|.|++||+|.+||+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~~   38 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI   38 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcCcc
Confidence            346 4679999999654    7999999999999964

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.8e-06  Score=52.58  Aligned_cols=29  Identities=31%  Similarity=0.823  Sum_probs=25.2

Q ss_pred             CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|+... +|+|.|++||+|..|+.
T Consensus         7 ~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           7 MSCSKQGECLETIGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             TGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             CcCCCCcEEECCCCCeEEeCCCCccCCCCCC
Confidence            78987 8898644 89999999999999984

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=6.6e-06  Score=54.16  Aligned_cols=38  Identities=42%  Similarity=1.063  Sum_probs=31.7

Q ss_pred             ccccCCCccee-cCCCCccCCCccCCCCccCCCCCCCCC
Q psy9819         124 GVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC  161 (377)
Q Consensus       124 g~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~~~~~C  161 (377)
                      +.|++.+|+|. |++++.|.+|++|.+||||++.+...|
T Consensus        13 ~~Cd~~tG~C~~C~~nt~G~~Cd~C~~G~yg~~~~~~~C   51 (56)
T d1kloa2          13 GNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPA   51 (56)
T ss_dssp             CCBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGG
T ss_pred             CccCCCCCCCCCCCCCCCCCCcCcccCCcccCCCCCCCC
Confidence            37888899995 999999999999999999976543333

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.76  E-value=5.3e-06  Score=62.98  Aligned_cols=81  Identities=25%  Similarity=0.530  Sum_probs=65.1

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK  275 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~  275 (377)
                      ..+|.|.|.+       +.+.+|.|+|. .++.+|..|++.++||...          ..++..+|+..    +..+.+.
T Consensus        25 ~~~C~w~I~~-------p~g~~I~l~f~-~f~~~c~~d~v~i~dg~~~----------~~~~~~~cg~~----~~~~~S~   82 (111)
T d1sfpa_          25 KTNCVWTIQM-------PPEYHVRVSIQ-YLQLNCNKESLEIIDGLPG----------SPVLGKICEGS----LMDYRSS   82 (111)
T ss_dssp             CSEEEEEEEC-------CTTCEEEEEEE-EEECCTTTEEEEEESSSTT----------SCEEEEESEEE----EEEEECS
T ss_pred             CCcEEEEEEc-------CCCceeeEEEe-ecccccceeeeeecCCccc----------eeeeccccCCC----cCCEEeC
Confidence            5679999999       56779999998 8889999999999997541          34567788754    3468889


Q ss_pred             CCeeEeccCCCCCC--CCCcccccc
Q psy9819         276 SGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       276 sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      ++.++|.|+++...  .||.+.|..
T Consensus        83 ~n~l~v~F~sd~~~~~~GF~~~y~~  107 (111)
T d1sfpa_          83 GSIMTVKYIREPEHPASFYEVLYFQ  107 (111)
T ss_dssp             SSEEEEEEEECTTSCCCCCEEEEEE
T ss_pred             CCEEEEEEEECCCcCCCCEEEEEEE
Confidence            99999999988754  999886643

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.6e-06  Score=52.56  Aligned_cols=29  Identities=31%  Similarity=0.964  Sum_probs=25.0

Q ss_pred             CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~   64 (377)
                      +||+| |+|+... +|+|.|++||+|..|++
T Consensus         7 ~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           7 TSCSGHGECVETINNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             TGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             CcCCCCcEEECCCCCEEEeCCCCCcCcCcCc
Confidence            68987 8998643 89999999999999984

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2.3e-06  Score=52.13  Aligned_cols=32  Identities=31%  Similarity=0.855  Sum_probs=26.4

Q ss_pred             cCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~  330 (377)
                      +.| +++|.|+|+|++.    +|.|++||+|.+||..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCCCC
Confidence            356 5679999999654    7999999999999864

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=1.3e-05  Score=51.57  Aligned_cols=42  Identities=36%  Similarity=0.946  Sum_probs=33.0

Q ss_pred             CCCCCCCcC-cccccCCCcceecCCCCccCCCccCCCCccCCC
Q psy9819         114 DCNSHGNSV-LGVCDSITGECICQDNTQGKNCERCLPGYYGDP  155 (377)
Q Consensus       114 ~C~~~g~~~-~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~  155 (377)
                      .|+..|+.. ...|+..+|+|.|+++++|.+|++|.+||++.+
T Consensus         2 ~C~~~Gs~~~~~~Cd~~tGqC~Ck~~v~G~~Cd~C~~g~~~~~   44 (51)
T d1kloa3           2 ACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQ   44 (51)
T ss_dssp             CCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGG
T ss_pred             cCCCCcccCCCCccCCCCCeecCCCCCcCCCcccccccccCCC
Confidence            344444332 236888899999999999999999999999874

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.61  E-value=8.5e-06  Score=50.07  Aligned_cols=32  Identities=31%  Similarity=0.941  Sum_probs=25.8

Q ss_pred             CcC-CCCCC-CeecC--CCCeeeecCC-CCccCCCCC
Q psy9819          33 LCY-NKCIY-GYCKG--PPDYSCQCEL-GWTGVDCSV   64 (377)
Q Consensus        33 ~C~-~~C~~-G~C~~--~~~~~C~C~~-G~~G~~C~~   64 (377)
                      .|. +||+| |+|+.  .++|+|.|++ ||+|..|++
T Consensus         4 ~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             cCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            344 79998 89975  3479999986 899999985

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=6.2e-06  Score=50.43  Aligned_cols=29  Identities=34%  Similarity=0.928  Sum_probs=24.5

Q ss_pred             CCCCC-CeecC--CCCeeeecC-CCCccCCCCC
Q psy9819          36 NKCIY-GYCKG--PPDYSCQCE-LGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~--~~~~~C~C~-~G~~G~~C~~   64 (377)
                      +||+| |+|+.  .++|+|.|+ +||+|..|++
T Consensus         7 ~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            79998 89975  347999997 6999999985

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.57  E-value=7.9e-05  Score=56.43  Aligned_cols=80  Identities=19%  Similarity=0.324  Sum_probs=57.5

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCC------CcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDIN------VPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY  269 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~------~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p  269 (377)
                      ..+|.|.|.+       +.+..|+|+|...++      ..|..|++.|+++..             ..+.+|+..   .|
T Consensus        25 ~~~C~w~I~~-------p~g~~i~l~F~~~f~le~~~~~~c~~d~l~v~~~~~-------------~~~~~Cg~~---~p   81 (114)
T d1nt0a2          25 LSSCAYNIRL-------EEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKR-------------EYGPFCGKT---LP   81 (114)
T ss_dssp             SCEEEEEEEC-------CSSCEEEEEECSCCBBCCC----C--CEEEEECSSC-------------EEEEECBSS---CC
T ss_pred             CCeEEEEEEe-------CCCCceeeEEeeeeccccccccccccceeeeeeecc-------------ceecccCCc---CC
Confidence            5679999999       556789998853343      348889999988654             235678765   45


Q ss_pred             cceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819         270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQI  298 (377)
Q Consensus       270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~  298 (377)
                      ..+.+.++.+.|.|.++...  .||.++|..
T Consensus        82 ~~~~S~~n~l~i~F~Sd~~~~~~GF~~~y~s  112 (114)
T d1nt0a2          82 PRIETDSNKVTITFTTDESGNHTGWKIHYTS  112 (114)
T ss_dssp             CCEECSSSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred             CCeEecCCEEEEEEEECCCCCCCCEEEEEEE
Confidence            67889999999999987654  889887653

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=9.5e-06  Score=51.24  Aligned_cols=32  Identities=34%  Similarity=0.780  Sum_probs=26.0

Q ss_pred             cCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~  331 (377)
                      +.| +++|.| |+|++.    +|.|++||+|.+||+++
T Consensus         9 ~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~~I   45 (48)
T d1autl1           9 HPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQREV   45 (48)
T ss_dssp             CSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSCEEC
T ss_pred             CcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCccccc
Confidence            467 466986 899665    79999999999999764

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=5.1e-05  Score=58.11  Aligned_cols=86  Identities=19%  Similarity=0.347  Sum_probs=59.9

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc-CCCc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH-RGYE  270 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~-~~p~  270 (377)
                      ..+|.|.|.+       +.+.+|.|+|. .+++    .|..|++.|+||....         ..+.+..|..... ..+.
T Consensus        25 ~~~C~W~I~~-------p~g~~I~l~f~-~fdle~~~~C~~D~l~i~dg~~~~---------~~~~g~~~~~~~~~~~~~   87 (121)
T d1szba1          25 DQERRWTLTA-------PPGYRLRLYFT-HFDLELSHLCEYDFVKLSSGAKVL---------ATLCGQESTDTERAPGKD   87 (121)
T ss_dssp             SCEEEEEEEC-------CTTEEEEEEEE-EEECCCCTTSCSSEEEEESSSSEE---------EEECSBTTTTCSSSCTTC
T ss_pred             CCeEEEEEEe-------CCCceeEEEee-eeeeeeeccccccceeeecCCccc---------cceeccccCCCcCCCCCc
Confidence            5679999999       56678999887 4443    4888999999976532         2344555544311 1234


Q ss_pred             ceecCCCeeEeccCCCCCC----CCCcccccc
Q psy9819         271 VLEAKSGVMTIHYKQGKPS----EGFNATYQI  298 (377)
Q Consensus       271 ~c~~~sG~~~v~~~s~~c~----~GF~g~~~~  298 (377)
                      .+.+.++.+.|.|.++...    .||.+.|..
T Consensus        88 ~~~S~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  119 (121)
T d1szba1          88 TFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA  119 (121)
T ss_dssp             CEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred             eEEEcCCEEEEEEEECCCCccCCCCEEEEEEE
Confidence            6788889999999987543    588886653

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.49  E-value=8.3e-06  Score=50.12  Aligned_cols=33  Identities=27%  Similarity=0.777  Sum_probs=26.2

Q ss_pred             ccCC-CCCCCCCCeecC-C----cccCCC-CCCCCCCCCC
Q psy9819         298 IFSC-PDKCPENRTCIN-N----QCVCPP-RRTGPDCQEE  330 (377)
Q Consensus       298 ~~~C-~~~C~~~g~C~~-g----~C~C~~-G~~G~~C~~~  330 (377)
                      ++.| +++|+|+|+|++ +    +|.|++ ||+|.+||++
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~p   41 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCcC
Confidence            3566 567999999953 2    799986 9999999974

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=2.5e-05  Score=42.86  Aligned_cols=25  Identities=28%  Similarity=0.761  Sum_probs=23.4

Q ss_pred             CCCCCCeecCCcccCCCCCCCCCCC
Q psy9819         304 KCPENRTCINNQCVCPPRRTGPDCQ  328 (377)
Q Consensus       304 ~C~~~g~C~~g~C~C~~G~~G~~C~  328 (377)
                      .|++||.|.-+.|+|.+||+|..|+
T Consensus         4 ~C~ghG~C~CG~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSCGDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCSTTTCCCTTEESSSSC
T ss_pred             eccCCCcccCCceEccCCccccccc
Confidence            4899999999999999999999986

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.38  E-value=1.9e-05  Score=48.17  Aligned_cols=32  Identities=22%  Similarity=0.755  Sum_probs=25.6

Q ss_pred             cCC-CCCCCCCCeecCC-----cccCC-CCCCCCCCCCC
Q psy9819         299 FSC-PDKCPENRTCINN-----QCVCP-PRRTGPDCQEE  330 (377)
Q Consensus       299 ~~C-~~~C~~~g~C~~g-----~C~C~-~G~~G~~C~~~  330 (377)
                      +.| +++|+|+|+|++.     +|.|+ +||+|.+||++
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~p   40 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCcC
Confidence            456 5679999999532     79996 69999999974

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=6.1e-05  Score=57.26  Aligned_cols=86  Identities=20%  Similarity=0.261  Sum_probs=58.1

Q ss_pred             CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc-CCCc
Q psy9819         196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH-RGYE  270 (377)
Q Consensus       196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~-~~p~  270 (377)
                      ...|.|.|.+       +.+.+|.|+|. .+++    .|..|++.|+||....         ..+++.+|+...+ ..+.
T Consensus        20 ~~~C~w~I~~-------p~g~~I~l~f~-~f~le~~~~C~~D~l~I~dg~~~~---------~~~~~~~~~~~~~~~~~~   82 (117)
T d1nzia1          20 EVEKSWDIEV-------PEGYGIHLYFT-HLDIELSENCAYDSVQIISGDTEE---------GRLCGQRSSNNPHSPIVE   82 (117)
T ss_dssp             SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEEC---CC---------EEECSEECCCCSSCCCSE
T ss_pred             CCcEEEEEEc-------CCCCcEEEEEE-eeeEeeecccccceeEEecCCCCC---------CceeeeecCCCCCCcccc
Confidence            4679999999       56678999887 4443    4888999999976522         3455667765421 1123


Q ss_pred             ceecCCCeeEeccCCCCCC----CCCcccccc
Q psy9819         271 VLEAKSGVMTIHYKQGKPS----EGFNATYQI  298 (377)
Q Consensus       271 ~c~~~sG~~~v~~~s~~c~----~GF~g~~~~  298 (377)
                      ...+.++.+.|.|.++...    .||.+.|..
T Consensus        83 ~~~s~~n~l~i~F~Sd~s~~~~~~GF~~~y~a  114 (117)
T d1nzia1          83 EFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA  114 (117)
T ss_dssp             EEEESSSEEEEEEEECSCCTTCCCEEEEEEEE
T ss_pred             eEEEcCCEEEEEEEECCCCCCCCCCEEEEEEE
Confidence            4678888999999887543    589887653

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.0001  Score=47.54  Aligned_cols=29  Identities=31%  Similarity=0.966  Sum_probs=24.3

Q ss_pred             CCCCC-CeecC---CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      ++|+| |+|..   ...|+|+|++||+|..|+.
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            68998 89963   2379999999999999985

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=7.9e-05  Score=50.06  Aligned_cols=33  Identities=33%  Similarity=0.840  Sum_probs=26.3

Q ss_pred             CCcC-CCCCC-Ceec------CCCCeeeecCCCCccCCCCC
Q psy9819          32 SLCY-NKCIY-GYCK------GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        32 ~~C~-~~C~~-G~C~------~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|. +||+| |+|.      ....|+|.|++||+|.+|+.
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            3344 68999 8994      23479999999999999995

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=3.7e-05  Score=46.70  Aligned_cols=25  Identities=32%  Similarity=0.889  Sum_probs=23.4

Q ss_pred             CCCCCeecCCcccCC-CCCCCCCCCC
Q psy9819         305 CPENRTCINNQCVCP-PRRTGPDCQE  329 (377)
Q Consensus       305 C~~~g~C~~g~C~C~-~G~~G~~C~~  329 (377)
                      |+++|+|+-|+|+|. +||+|..||+
T Consensus        13 Cng~G~C~cG~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          13 CSGRGKCECGSCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             GGGTEEEETTEEEECCSSCBSTTSCB
T ss_pred             ECCCCEEECCEeEeCCCCccCCcccc
Confidence            999999999999994 7999999996

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=8.1e-05  Score=47.69  Aligned_cols=31  Identities=29%  Similarity=0.751  Sum_probs=28.3

Q ss_pred             eeecCCCcccCCCCCCCCCCCCCCCCCcccCC
Q psy9819          73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNA  104 (377)
Q Consensus        73 ~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~  104 (377)
                      .|++.+++| .|+++++|.+|++|.+|||+..
T Consensus        14 ~Cd~~tGqC-~Ck~~v~G~~Cd~C~~g~~~~~   44 (51)
T d1kloa3          14 SCNPVTGQC-QCLPHVSGRDCGTCDPGYYNLQ   44 (51)
T ss_dssp             CCCTTTCCC-CBCTTEESTTCCEECTTCBCGG
T ss_pred             ccCCCCCee-cCCCCCcCCCcccccccccCCC
Confidence            577889999 7999999999999999999974

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=5e-05  Score=43.68  Aligned_cols=28  Identities=32%  Similarity=0.871  Sum_probs=23.9

Q ss_pred             CCCCCCeecCC-------cccCCCCCCCCCCCCCC
Q psy9819         304 KCPENRTCINN-------QCVCPPRRTGPDCQEEI  331 (377)
Q Consensus       304 ~C~~~g~C~~g-------~C~C~~G~~G~~C~~~~  331 (377)
                      .|.|+|+|+.-       +|.||.+|.|.+||++.
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiDt   37 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK   37 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEecc
Confidence            38899999654       79999999999999863

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=7.8e-05  Score=47.04  Aligned_cols=29  Identities=31%  Similarity=0.886  Sum_probs=24.2

Q ss_pred             CCCCC-CeecC---CCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIY-GYCKG---PPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~-G~C~~---~~~~~C~C~~G~~G~~C~~   64 (377)
                      ++|+| |+|..   ..+|+|.|++||+|..|+.
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            57998 99963   3478999999999999984

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00012  Score=45.52  Aligned_cols=29  Identities=38%  Similarity=0.952  Sum_probs=24.3

Q ss_pred             CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      ++|+||.|.   +...++|.|++||+|.+|+.
T Consensus        12 ~yC~nG~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CcCcCCEEEEeCCCCccEeECCCCceecCcee
Confidence            489999985   33478999999999999984

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=7.7e-05  Score=45.01  Aligned_cols=23  Identities=35%  Similarity=0.891  Sum_probs=20.9

Q ss_pred             CCCCeecCCcccCCCCCCCCCCC
Q psy9819         306 PENRTCINNQCVCPPRRTGPDCQ  328 (377)
Q Consensus       306 ~~~g~C~~g~C~C~~G~~G~~C~  328 (377)
                      .+||+|+.++|+|.+||+|.+||
T Consensus        18 ~~hG~C~~G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          18 PGRGLCFCGKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HHHEEEETTEEEECTTCCTTTTC
T ss_pred             CCCCeEECCEEEcCCCCcccCcc
Confidence            35899999999999999999997

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.00018  Score=46.81  Aligned_cols=27  Identities=48%  Similarity=1.047  Sum_probs=24.0

Q ss_pred             Ccce-ecCCCCccCCCccCCCCccCCCC
Q psy9819         130 TGEC-ICQDNTQGKNCERCLPGYYGDPT  156 (377)
Q Consensus       130 ~g~C-~C~~g~~G~~C~~C~~G~~g~~~  156 (377)
                      .++| .|+++|+|.+|++|.+||+|+|.
T Consensus        17 ~~vC~~C~~~~~G~~Ce~C~~g~yg~P~   44 (55)
T d1kloa1          17 EVVCTHCPTGTAGKRCELCDDGYFGDPL   44 (55)
T ss_dssp             CEEECSCCTTEESTTSCEECTTEEEETT
T ss_pred             CEEcCCCCCCCccCcccccCCccccCcc
Confidence            4578 59999999999999999999875

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.0011  Score=42.50  Aligned_cols=32  Identities=22%  Similarity=0.325  Sum_probs=22.5

Q ss_pred             eCCCCCCCCCCCCCeec--ccccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTLH--YQVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~~--~~~~~~~c~~~~~~~~  377 (377)
                      |++-+.+ .|.||++|+  ...+.|+|+|+.+|++
T Consensus         6 C~~c~~~-~C~NgG~C~~~~~~~~~~C~C~~gy~G   39 (53)
T d3egfa_           6 CPSSYDG-YCLNGGVCMHIESLDSYTCNCVIGYSG   39 (53)
T ss_dssp             CCTTSSC-CSCSSCEEEEESSSSCEEEECCTTCCS
T ss_pred             CCCCCCC-CCCCCcEeeccCCCCCeEeECCCCCcC
Confidence            4455554 588888887  4456788888888864

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0018  Score=40.54  Aligned_cols=32  Identities=28%  Similarity=0.507  Sum_probs=23.5

Q ss_pred             eCCCCCCCCCCCCCeecc--cccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTLHY--QVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~~~--~~~~~~c~~~~~~~~  377 (377)
                      |++-+.+ .|.||++|+.  +...|+|+|+.+|++
T Consensus         4 C~~c~~~-~C~ngG~C~~~~~~~~~~C~C~~gy~G   37 (48)
T d1nqlb_           4 CPLSHDG-YCLHDGVCMYIEALDKYACNCVVGYIG   37 (48)
T ss_dssp             CCSTTCC-EECTTCEEEEETTTTEEEEEECTTEES
T ss_pred             CCCCCCC-CCCCCcEEeeeCCCCCeEEeCCCCccc
Confidence            4444443 4999999975  556899999999974

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0021  Score=40.49  Aligned_cols=29  Identities=31%  Similarity=0.670  Sum_probs=22.4

Q ss_pred             CCCCCCe-ec--CCCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGY-CK--GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~-C~--~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|+||. |.  ....++|.|++||+|..|+.
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            4699955 53  33468999999999999984

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0028  Score=42.13  Aligned_cols=26  Identities=12%  Similarity=0.216  Sum_probs=19.9

Q ss_pred             CCCCCCCeec-----ccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLH-----YQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~-----~~~~~~~c~~~~~~~~  377 (377)
                      ..|.||++|+     +.+++|+|+|+.+|++
T Consensus        12 ~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G   42 (63)
T d1haea_          12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTG   42 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEES
T ss_pred             CcCCCCCEEeecccccCCCCEEeECCCCCCC
Confidence            4588888884     5667888888888864

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0016  Score=39.08  Aligned_cols=27  Identities=41%  Similarity=0.808  Sum_probs=22.4

Q ss_pred             CCCCCeecC---CCCeeeecCCCCccCCCC
Q psy9819          37 KCIYGYCKG---PPDYSCQCELGWTGVDCS   63 (377)
Q Consensus        37 ~C~~G~C~~---~~~~~C~C~~G~~G~~C~   63 (377)
                      -|+||+|.-   .....|.|++||+|.+|+
T Consensus         9 yCihG~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           9 FCIHGECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             CCSSEEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             EeECcEEeecCcCCCceeECCCCCeecCcc
Confidence            488999973   236689999999999997

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0024  Score=38.70  Aligned_cols=24  Identities=17%  Similarity=0.212  Sum_probs=20.4

Q ss_pred             CCCCCCeecccccCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .|.+ +.|+|.+++|+|.|++||.+
T Consensus        11 ~C~~-~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          11 LCRG-GVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TTTT-SEEEEETTEEEEESCTTSCC
T ss_pred             CCCC-CEeECCCCCeEEeCCCCCeE
Confidence            4554 58999999999999999974

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.0028  Score=39.65  Aligned_cols=29  Identities=28%  Similarity=0.799  Sum_probs=22.5

Q ss_pred             CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819          36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV   64 (377)
Q Consensus        36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~   64 (377)
                      +.|+||.|.   +...++|.|++||+|.+|+.
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEecCCcc
Confidence            469996543   33478999999999999984

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.002  Score=39.45  Aligned_cols=25  Identities=32%  Similarity=0.913  Sum_probs=21.1

Q ss_pred             CCCCCCeecC-CCCeeeecCCCCccC
Q psy9819          36 NKCIYGYCKG-PPDYSCQCELGWTGV   60 (377)
Q Consensus        36 ~~C~~G~C~~-~~~~~C~C~~G~~G~   60 (377)
                      .+|.|++|++ +++|+|.|++||++.
T Consensus        11 ~~C~~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1          11 DLCGRGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             STTTTSCEEEETTEEEECCCSSEEEC
T ss_pred             CCCCCCEeEcCCCCeEEeCCCCCccC
Confidence            3578899997 569999999999975

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0039  Score=35.61  Aligned_cols=28  Identities=43%  Similarity=0.956  Sum_probs=17.2

Q ss_pred             CCCCCCceeecC-----CCcccCCCCCCCCCCCC
Q psy9819          66 CLCNNHSTCVHG-----IGICDECHDWTTGDHCQ   94 (377)
Q Consensus        66 C~C~~~g~C~~~-----~~~C~~C~~g~~G~~C~   94 (377)
                      |.|.|+|+|+..     --+| .|+.+|.|.+||
T Consensus         2 C~ClNGG~Cvsyk~FS~I~rC-~CPk~f~G~HCE   34 (40)
T d2i9aa1           2 CDCLNGGTCVSNKYFSNIHWC-NCPKKFGGQHCE   34 (40)
T ss_dssp             CCCCTTCEEEECSSSTTCEEE-ECCTTEESTTSC
T ss_pred             CccccCCEEEEEehhcCCEEe-cCCcccCceeEE
Confidence            456677777622     2346 577777777765

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.003  Score=38.20  Aligned_cols=24  Identities=29%  Similarity=0.657  Sum_probs=20.2

Q ss_pred             CCCCCCeecC-CCCeeeecCCCCcc
Q psy9819          36 NKCIYGYCKG-PPDYSCQCELGWTG   59 (377)
Q Consensus        36 ~~C~~G~C~~-~~~~~C~C~~G~~G   59 (377)
                      ..|.||.|++ +++|+|.|++||+-
T Consensus        10 ~~C~~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          10 LLCRGGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             STTTTSEEEEETTEEEEESCTTSCC
T ss_pred             CCCCCCEeECCCCCeEEeCCCCCeE
Confidence            4577899997 56999999999983

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0036  Score=37.27  Aligned_cols=24  Identities=13%  Similarity=0.189  Sum_probs=20.8

Q ss_pred             CCCCCCCeecccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ..|++  .|+|.+++|+|.|++||++
T Consensus         9 ~~C~~--~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           9 GFCSG--VCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             SSCSS--EEEECSSSEEEEECSSSSC
T ss_pred             cCccC--EeeCCCCCeEeECCCCCee
Confidence            34765  9999999999999999974

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.37  E-value=0.0031  Score=37.67  Aligned_cols=25  Identities=12%  Similarity=0.129  Sum_probs=22.1

Q ss_pred             CCCCCCCeecccccCeeeecCCCee
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ..|..-++|++..++|+|+|++||.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~   31 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYT   31 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCc
Confidence            3577788999999999999999996

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0042  Score=39.03  Aligned_cols=33  Identities=18%  Similarity=0.301  Sum_probs=24.7

Q ss_pred             EeCCCCCCCCCCCCCee-cccccCeeeecCCCeeC
Q psy9819         344 TCDLLLTGVHITHGRTL-HYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       344 ~C~~g~~G~~C~~g~~~-~~~~~~~~c~~~~~~~~  377 (377)
                      .|++.+.+ .|.||++| +...+.++|+|+.+|++
T Consensus         7 pC~~~~~~-yC~nGgcc~~~~~~~~~C~C~~gy~G   40 (50)
T d1ioxa_           7 RCPKQYKH-YCIKGRCRFVVAEQTPSCVCDEGYIG   40 (50)
T ss_dssp             ECCGGGTT-SCTTCCEEEETTTTEEEECCCTTEET
T ss_pred             ccCcccCC-CccCCeEEEeCCCCCcEeECCCCCee
Confidence            46666644 78888888 47777788999988874

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0028  Score=38.56  Aligned_cols=23  Identities=26%  Similarity=0.657  Sum_probs=19.3

Q ss_pred             CCCCCeecC-CCCeeeecCCCCcc
Q psy9819          37 KCIYGYCKG-PPDYSCQCELGWTG   59 (377)
Q Consensus        37 ~C~~G~C~~-~~~~~C~C~~G~~G   59 (377)
                      .|.|++|++ +++|+|.|++||+-
T Consensus        12 ~c~~~~C~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2          12 LCQGGKCINTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             GGBTSEEEECSSCEEEECCTTCCB
T ss_pred             CcCCCEEECCCCCeEeECCCCCeE
Confidence            466889986 56999999999984

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.0034  Score=38.18  Aligned_cols=24  Identities=17%  Similarity=0.376  Sum_probs=20.0

Q ss_pred             CCCCCCeecccccCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .|.++ +|+|.+++|+|.|+.||.+
T Consensus        12 ~c~~~-~C~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2          12 LCQGG-KCINTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             GGBTS-EEEECSSCEEEECCTTCCB
T ss_pred             CcCCC-EEECCCCCeEeECCCCCeE
Confidence            35544 8999999999999999963

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0032  Score=37.64  Aligned_cols=21  Identities=33%  Similarity=0.901  Sum_probs=18.6

Q ss_pred             CCeecCCCCeeeecCCCCccCCCC
Q psy9819          40 YGYCKGPPDYSCQCELGWTGVDCS   63 (377)
Q Consensus        40 ~G~C~~~~~~~C~C~~G~~G~~C~   63 (377)
                      ||+|+.   .+|.|.+||+|++|+
T Consensus        20 hG~C~~---G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          20 RGLCFC---GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HEEEET---TEEEECTTCCTTTTC
T ss_pred             CCeEEC---CEEEcCCCCcccCcc
Confidence            799983   489999999999997

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.0056  Score=37.68  Aligned_cols=27  Identities=30%  Similarity=0.655  Sum_probs=20.4

Q ss_pred             CCCCCCCeec--CC----cccCCCCCCCCCCCCC
Q psy9819         303 DKCPENRTCI--NN----QCVCPPRRTGPDCQEE  330 (377)
Q Consensus       303 ~~C~~~g~C~--~g----~C~C~~G~~G~~C~~~  330 (377)
                      +.|.| |.|.  ..    .|+|++||+|.+||..
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~~   44 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceecCceee
Confidence            35887 6772  22    6999999999999863

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.0043  Score=37.83  Aligned_cols=23  Identities=13%  Similarity=0.183  Sum_probs=20.0

Q ss_pred             CCCCCCeecccccCeeeecCCCee
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      .|.+ ++|+|.+++|+|.|++||.
T Consensus        12 ~C~~-~~C~Nt~Gsy~C~C~~Gy~   34 (44)
T d1lmja1          12 LCGR-GQCVNTPGDFECKCDEGYE   34 (44)
T ss_dssp             TTTT-SCEEEETTEEEECCCSSEE
T ss_pred             CCCC-CEeEcCCCCeEEeCCCCCc
Confidence            4555 5899999999999999995

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.0077  Score=37.54  Aligned_cols=32  Identities=28%  Similarity=0.344  Sum_probs=21.4

Q ss_pred             eCCCCCCCCCCCCCee-cccccCeeeecCCCeeC
Q psy9819         345 CDLLLTGVHITHGRTL-HYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       345 C~~g~~G~~C~~g~~~-~~~~~~~~c~~~~~~~~  377 (377)
                      |++.+. .+|.||++| +...+.++|+|+.+|++
T Consensus         7 C~~~~~-~yClnGgcc~~~~~~~~~C~C~~gy~G   39 (49)
T d1moxc_           7 CPDSHT-QFCFHGTCRFLVQEDKPACVCHSGYVG   39 (49)
T ss_dssp             CCCCSS-CSSTTEEEEEETTTTEEEEEECTTEES
T ss_pred             cCcccC-CEeeCCeEEecCCCCCcEeECCCCCEe
Confidence            555554 467777777 45666777777777763

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.007  Score=38.55  Aligned_cols=21  Identities=33%  Similarity=0.491  Sum_probs=18.8

Q ss_pred             CCCCCeecccccCeeeecCCCee
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      |++  .|+|.+++|+|.|+.||+
T Consensus        22 c~~--~C~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_          22 CQH--LCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             TSS--EEEEETTEEEEECSTTCE
T ss_pred             ccC--EeEcCCCCeEeECCCCCe
Confidence            444  899999999999999997

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.0081  Score=35.77  Aligned_cols=22  Identities=14%  Similarity=0.247  Sum_probs=19.7

Q ss_pred             CCCCCeecccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      |+|  .|++.+++|+|.|+.||.+
T Consensus        12 C~h--~C~n~~g~~~C~C~~Gy~L   33 (40)
T d3bpse1          12 CSH--VCNDLKIGYECLCPDGFQL   33 (40)
T ss_dssp             CSS--EEEECSSSEEEECCTTCCE
T ss_pred             CcC--EEEcCCCCEEEECCCCCEE
Confidence            667  9999999999999999963

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.012  Score=35.35  Aligned_cols=24  Identities=21%  Similarity=0.434  Sum_probs=21.1

Q ss_pred             CCCCCCCeecccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ..|++  .|++.+++|+|.|+.||.+
T Consensus         9 ~~C~~--~C~n~~Gsy~C~C~~Gy~L   32 (42)
T d1nzia2           9 VPCSH--FCNNFIGGYFCSCPPEYFL   32 (42)
T ss_dssp             CCSSS--EEEEETTEEEEECCTTCEE
T ss_pred             cCCCC--EeecCCCCEEEeCCCCCEE
Confidence            45887  8999999999999999963

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.011  Score=35.43  Aligned_cols=24  Identities=8%  Similarity=0.203  Sum_probs=20.4

Q ss_pred             CCCCCCCeecccccCeeeecCCCeeC
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      ..|++  .|++..++|+|.|+.||.+
T Consensus         8 ~~C~~--~C~n~~Gsy~C~C~~Gy~L   31 (41)
T d1i0ua2           8 DTCSQ--LCVNLEGGYKCQCEEGFQL   31 (41)
T ss_dssp             TSCSS--CEECSSSCCEECCCTTEEE
T ss_pred             CCCCC--EeECCCCCEEeECCCCCeE
Confidence            35776  8999999999999999973

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.011  Score=35.52  Aligned_cols=27  Identities=37%  Similarity=1.197  Sum_probs=21.7

Q ss_pred             CCCCCCcCcccccCCCcceecC-CCCccCCCccCC
Q psy9819         115 CNSHGNSVLGVCDSITGECICQ-DNTQGKNCERCL  148 (377)
Q Consensus       115 C~~~g~~~~g~C~~~~g~C~C~-~g~~G~~C~~C~  148 (377)
                      |+++|     +|.  -|.|+|. ++|.|..||.|+
T Consensus        13 Cng~G-----~C~--cG~C~C~~~gy~G~~Ce~Cp   40 (43)
T d1jv2b5          13 CSGRG-----KCE--CGSCVCIQPGSYGDTCEKCP   40 (43)
T ss_dssp             GGGTE-----EEE--TTEEEECCSSCBSTTSCBCT
T ss_pred             ECCCC-----EEE--CCEeEeCCCCccCCccccCC
Confidence            66666     776  6899994 799999999875

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.87  E-value=0.012  Score=35.95  Aligned_cols=23  Identities=26%  Similarity=0.524  Sum_probs=20.0

Q ss_pred             CCCCCCeecccccCeeeecCCCeeC
Q psy9819         353 HITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       353 ~C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      .|++  .|++..++|+|.|++||.+
T Consensus        13 ~C~~--~C~Nt~gsy~C~C~~Gy~L   35 (45)
T d1nt0a3          13 PCDH--YCHNYLGGYYCSCRVGYIL   35 (45)
T ss_dssp             CCSS--EEEEETTEEEEECCTTEEE
T ss_pred             CCCC--EeecCCCCEEEeCCCCCEE
Confidence            4666  9999999999999999963

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.01  Score=35.96  Aligned_cols=19  Identities=11%  Similarity=0.160  Sum_probs=17.8

Q ss_pred             CeecccccCeeeecCCCee
Q psy9819         358 RTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       358 ~~~~~~~~~~~c~~~~~~~  376 (377)
                      +.|+|.+++|+|.|++||.
T Consensus        15 ~~C~Nt~G~y~C~C~~Gy~   33 (43)
T d1uzka1          15 GNCVNTPGSYICDCPPDFE   33 (43)
T ss_dssp             SEEEEETTEEEEECCTTCE
T ss_pred             CEeECCCCCEEEecCCCCE
Confidence            5899999999999999995

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.011  Score=35.79  Aligned_cols=20  Identities=20%  Similarity=0.307  Sum_probs=17.9

Q ss_pred             CCeecccccCeeeecCCCee
Q psy9819         357 GRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       357 g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ..+|+|.+++|+|+|+.||.
T Consensus        16 ~~~C~Nt~Gsy~C~C~~Gy~   35 (43)
T d1emoa1          16 HGQCINTDGSYRCECPFGYI   35 (43)
T ss_dssp             SSCCCCCSSCCCCCCCTTEE
T ss_pred             CCEeECCCCCeEeECCCCcc
Confidence            45899999999999999996

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.014  Score=35.24  Aligned_cols=29  Identities=28%  Similarity=0.749  Sum_probs=20.5

Q ss_pred             CCCcCC--CCCCCeecC-CCCeeeecCCCCcc
Q psy9819          31 ASLCYN--KCIYGYCKG-PPDYSCQCELGWTG   59 (377)
Q Consensus        31 ~~~C~~--~C~~G~C~~-~~~~~C~C~~G~~G   59 (377)
                      +..|..  .+.+++|++ +++|.|.|++||++
T Consensus         5 idEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPDVCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcCCCCCCEeECCCCCeEeECCCCccc
Confidence            444542  234678987 45999999999984

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.014  Score=32.91  Aligned_cols=23  Identities=39%  Similarity=0.923  Sum_probs=20.3

Q ss_pred             CCCCCCeecC-CCCeeeecCCCCc
Q psy9819          36 NKCIYGYCKG-PPDYSCQCELGWT   58 (377)
Q Consensus        36 ~~C~~G~C~~-~~~~~C~C~~G~~   58 (377)
                      +||.||+|++ .+.|.|.|..||.
T Consensus         8 npCGnGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           8 NPCGNGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CSSSSSCEEECSSSEEECCSSSSC
T ss_pred             CccCCceeeecccceEEeecCCcC
Confidence            7899999996 4589999999986

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.96  E-value=0.015  Score=34.52  Aligned_cols=24  Identities=25%  Similarity=0.895  Sum_probs=18.8

Q ss_pred             CC-CCCeecC-CCCeeeecCCCCccC
Q psy9819          37 KC-IYGYCKG-PPDYSCQCELGWTGV   60 (377)
Q Consensus        37 ~C-~~G~C~~-~~~~~C~C~~G~~G~   60 (377)
                      .| .|.+|++ +++|+|.|++||+|.
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcCC
Confidence            35 3688986 459999999999973

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.03  Score=30.34  Aligned_cols=25  Identities=36%  Similarity=1.107  Sum_probs=20.1

Q ss_pred             CCCCCCCcCcccccCCCcceecCCCCccCCCc
Q psy9819         114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCE  145 (377)
Q Consensus       114 ~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~  145 (377)
                      .|.+||     .|+  -|.|.|.+||+|..|.
T Consensus         4 ~C~ghG-----~C~--CG~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHG-----QCS--CGDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCT-----TCC--STTTCCCTTEESSSSC
T ss_pred             eccCCC-----ccc--CCceEccCCccccccc
Confidence            466766     676  6899999999999885

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.047  Score=33.17  Aligned_cols=22  Identities=27%  Similarity=0.662  Sum_probs=19.1

Q ss_pred             CCCCCeecccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      |++  .|++..++|+|.|++||.+
T Consensus        14 C~~--~C~Nt~Gsy~C~C~~Gy~l   35 (45)
T d1szba2          14 CDH--HCHNHLGGFYCSCRAGYVL   35 (45)
T ss_dssp             SSS--EEEEETTEEEEECCTTEEE
T ss_pred             CCC--CCccCCCCeEEECCCCCeE
Confidence            555  9999999999999999963

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.16  E-value=0.028  Score=33.86  Aligned_cols=23  Identities=35%  Similarity=0.897  Sum_probs=18.6

Q ss_pred             CCCCCeecC-CCCeeeecCCCCcc
Q psy9819          37 KCIYGYCKG-PPDYSCQCELGWTG   59 (377)
Q Consensus        37 ~C~~G~C~~-~~~~~C~C~~G~~G   59 (377)
                      .+-++.|++ +++|.|.|++||..
T Consensus        11 ~~c~~~C~Nt~G~y~C~C~~Gy~l   34 (43)
T d1uzka1          11 TCISGNCVNTPGSYICDCPPDFEL   34 (43)
T ss_dssp             SSBTSEEEEETTEEEEECCTTCEE
T ss_pred             cCcCCEeECCCCCEEEecCCCCEE
Confidence            345789987 56999999999974

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.026  Score=33.53  Aligned_cols=24  Identities=29%  Similarity=0.901  Sum_probs=18.4

Q ss_pred             CCCCCeec--C----CcccCCCCCCCCCCCC
Q psy9819         305 CPENRTCI--N----NQCVCPPRRTGPDCQE  329 (377)
Q Consensus       305 C~~~g~C~--~----g~C~C~~G~~G~~C~~  329 (377)
                      |.+ |+|.  .    -.|+|+.||+|.+|+.
T Consensus        10 Cih-G~C~~i~~l~~~~C~C~~gY~G~RCq~   39 (41)
T d1xdtr_          10 CIH-GECKYVKELRAPSCICHPGYHGERCHG   39 (41)
T ss_dssp             CSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred             eEC-cEEeecCcCCCceeECCCCCeecCccc
Confidence            776 8882  1    1699999999999874

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.042  Score=34.24  Aligned_cols=22  Identities=32%  Similarity=0.533  Sum_probs=18.8

Q ss_pred             CCCCCeecccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      |+|  .|++.+++|+|.|+.||.+
T Consensus         9 C~~--~C~~~~g~~~C~C~~Gy~L   30 (50)
T d1autl2           9 CTH--YCLEEVGWRRCSCAPGYKL   30 (50)
T ss_dssp             CSS--EEEECSSSEEEECCTTEEE
T ss_pred             ccc--EeecCCCCeEEECCCCCEE
Confidence            666  8999999999999999963

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.02  E-value=0.061  Score=33.60  Aligned_cols=22  Identities=18%  Similarity=0.493  Sum_probs=19.1

Q ss_pred             CCCCCeecccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~~  377 (377)
                      |+|  .|++..++|+|.|+.||.+
T Consensus        10 C~h--~C~n~~g~~~C~C~~Gy~L   31 (51)
T d2p3ua1          10 CDQ--FCHEEQNSVVCSCARGYTL   31 (51)
T ss_dssp             CSS--EEEEETTEEEEECCTTEEE
T ss_pred             ccc--EeecCCCCeEeEcCCCCEE
Confidence            677  8999999999999999963

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.96  E-value=0.085  Score=31.05  Aligned_cols=23  Identities=22%  Similarity=0.530  Sum_probs=17.9

Q ss_pred             CCCCCCeecC-CCCeeeecCCCCcc
Q psy9819          36 NKCIYGYCKG-PPDYSCQCELGWTG   59 (377)
Q Consensus        36 ~~C~~G~C~~-~~~~~C~C~~G~~G   59 (377)
                      .+|+| .|++ +++|+|.|++||+.
T Consensus         9 ~~C~~-~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           9 GFCSG-VCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             SSCSS-EEEECSSSEEEEECSSSSC
T ss_pred             cCccC-EeeCCCCCeEeECCCCCee
Confidence            35653 7886 56999999999984

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.64  E-value=0.091  Score=31.81  Aligned_cols=20  Identities=35%  Similarity=1.055  Sum_probs=16.2

Q ss_pred             CCCCeecC-CCCeeeecCCCCc
Q psy9819          38 CIYGYCKG-PPDYSCQCELGWT   58 (377)
Q Consensus        38 C~~G~C~~-~~~~~C~C~~G~~   58 (377)
                      |+| .|++ +++|+|.|++||+
T Consensus        14 C~~-~C~Nt~gsy~C~C~~Gy~   34 (45)
T d1nt0a3          14 CDH-YCHNYLGGYYCSCRVGYI   34 (45)
T ss_dssp             CSS-EEEEETTEEEEECCTTEE
T ss_pred             CCC-EeecCCCCEEEeCCCCCE
Confidence            544 7886 5699999999997

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.61  E-value=0.1  Score=32.50  Aligned_cols=21  Identities=19%  Similarity=0.491  Sum_probs=14.0

Q ss_pred             CCCCCeecccccCeeeecCCCee
Q psy9819         354 ITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       354 C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      |+|  .|++..++|+|.|+.||.
T Consensus         8 C~h--~C~~~~~~~~C~C~~Gy~   28 (51)
T d1kigl_           8 CDQ--FCREERSEVRCSCAHGYV   28 (51)
T ss_dssp             SSS--CCCEETTEECCCCCTTEE
T ss_pred             ccc--EeEcCCCcEEeEcCCCCE
Confidence            555  566677777777777764

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.82  E-value=0.15  Score=28.68  Aligned_cols=24  Identities=17%  Similarity=0.282  Sum_probs=19.7

Q ss_pred             CCCCCCCeecccccCeeeecCCCee
Q psy9819         352 VHITHGRTLHYQVDLIRCTCRQVYL  376 (377)
Q Consensus       352 ~~C~~g~~~~~~~~~~~c~~~~~~~  376 (377)
                      ..|-+ +||-+.+++|.|+|..||.
T Consensus         8 npCGn-GTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           8 NPCGN-GTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CSSSS-SCEEECSSSEEECCSSSSC
T ss_pred             CccCC-ceeeecccceEEeecCCcC
Confidence            44544 5999999999999999984

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.72  E-value=0.22  Score=30.74  Aligned_cols=22  Identities=14%  Similarity=0.214  Sum_probs=16.7

Q ss_pred             CCCCCeec------ccccCeeeecCCCeeC
Q psy9819         354 ITHGRTLH------YQVDLIRCTCRQVYLI  377 (377)
Q Consensus       354 C~~g~~~~------~~~~~~~c~~~~~~~~  377 (377)
                      |+|  .|+      +...+|+|.|+.||.+
T Consensus        14 C~h--~Cl~~p~~~n~~~~y~C~C~~G~~L   41 (50)
T d1ijqa2          14 CQY--LCLPAPQINPHSPKFTCACPDGMLL   41 (50)
T ss_dssp             CSS--EEEECCCCSTTCCSEEEECCTTCEE
T ss_pred             CcC--ccCCCcCcccCCCCEEEeCCCCCEE
Confidence            555  664      5667899999999864

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.04  E-value=0.3  Score=30.48  Aligned_cols=18  Identities=28%  Similarity=0.827  Sum_probs=15.3

Q ss_pred             CeecC-CCCeeeecCCCCc
Q psy9819          41 GYCKG-PPDYSCQCELGWT   58 (377)
Q Consensus        41 G~C~~-~~~~~C~C~~G~~   58 (377)
                      ..|++ +++|+|.|++||+
T Consensus        24 ~~C~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_          24 HLCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             SEEEEETTEEEEECSTTCE
T ss_pred             CEeEcCCCCeEeECCCCCe
Confidence            36886 5699999999998