Psyllid ID: psy9871

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPASPFSPLPSPACREFILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMFQ
Secondary Structure (PSIPRED)
cccccccEEEEEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccccccccccEEEEEccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHEEEcccccccccccccHHHHHHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHEEEcccccccccccccccccccccccHHccccccHHHHHHHHcccccHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEccccccccccccccEEEEEEEccccEEEEEEEccccccc
Coil and Loop (DISEMBL)
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSdmesfkaanpgailEDFIrwysprdfiesseldqygqkkgsLSARMLLPGNTWREVWEaakpvparrqrrLFNDTKEAEKILHLfecqspgsvAVLLVPALIHGAVSRLLEAihsvpvpslgrMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHhklspdnndasTQQFLADLvmnpssiiqvpegphgvigkRMSQMFYEAqkdtdvwklpaspfsplpspacrEFILrvvaprpapssrptphkltalimapdslimsgcftqdtmfq
Flexible Loop (DISEMBL)
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEaakpvparrqrrLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPASPFSPLPSPACREFILRVVAPrpapssrptphKLTALIMAPDSLIMSGCFTQDTMFQ
Low Complexity Region (SEG)
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKlpaspfsplpspaCREFILrvvaprpapssrpTPHKLTALIMAPDSLIMSGCFTQDTMFQ
Disordered region (IsUnstruct)
****RKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTD*********************FKAANPGAILEDFIRWYSPRDFIES*************SARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHH*************FLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPAS*F****SPACREFILRVVA**************TALIMAPDSLIMSGCF*******
Disordered Region (DISOPRED)
****RKL*LYYQISLDFLIVIKTEDQIEEDAEFLL****************SASLLSDMESFKAANPGAILEDFIRWYSPR**************************NTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHS**VPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLS**********FLADLVMNPSSIIQVPEGPHGVIGKRMSQMF************************CREFILRVVAP********TPHKLTALIMAPDSLIMSGCFTQDT*F*
Disordered Region (DISEMBL)
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPASPFSPLPSPACREFILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMFQ
Disordered Region (DISPRO)
*SNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIE******************LLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPASPFSPLPSPACREFILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQD****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNVRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKDTDVWKLPASPFSPLPSPACREFILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMFQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	340	2.2.26 [Sep-21-2011]
Q642R9	978	Rab3 GTPase-activating pr	N/A	N/A	0.923	0.321	0.405	2e-62
P69735	775	Rab3 GTPase-activating pr	yes	N/A	0.923	0.405	0.403	3e-60
Q15042	981	Rab3 GTPase-activating pr	yes	N/A	0.923	0.320	0.400	6e-60
Q80UJ7	981	Rab3 GTPase-activating pr	yes	N/A	0.920	0.319	0.399	7e-60
Q6NUV0	969	Rab3 GTPase-activating pr	yes	N/A	0.929	0.326	0.376	8e-56
Q9VQ26	916	Rab3 GTPase-activating pr	yes	N/A	0.452	0.168	0.490	7e-36
Q93538	915	Rab3 GTPase-activating pr	yes	N/A	0.388	0.144	0.390	2e-22

>sp|Q642R9|RB3GP_XENLA Rab3 GTPase-activating protein catalytic subunit OS=Xenopus laevis GN=rab3gap1 PE=2 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 189/335 (56%), Gaps = 21/335 (6%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           T+D +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct: 646 TDDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRD 705

Query: 83  FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
           +IE   +D  G K  KG LSARM +P N W E WE AKP+PARRQRRLF+DTKEAEK+LH
Sbjct: 706 YIEEEVMDDKGNKIFKGELSARMKIPNNMWVEAWETAKPIPARRQRRLFDDTKEAEKVLH 765

Query: 141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
               Q P  +   L+P +IH A+ +L E   +  +PS  +    +I       R    + 
Sbjct: 766 YLAVQKPADLTRHLLPCVIHAALLKLKEEEAAEDIPSGRKAIKQIISHSSKVLRFPSPDD 825

Query: 201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPEGP--- 257
           K+ +D+ S+I  +EA +++  SL  K + D  + S ++   DL    S ++  PE P   
Sbjct: 826 KKLEDVISQISNVEAAIARARSLKAKFAIDRCEKSEER--EDLEKFVSCLLDQPEVPIIG 883

Query: 258 --HGVIGKRMSQMFY-----------EAQKDTDVWKLPASPFSPLPSPACREFILRVVAP 304
              G  G  + +MF            E ++ +       +  +  PSPA RE ILR   P
Sbjct: 884 AGRGAAGTIIHKMFVQRALTLAPVEEEPKRSSSSDDRRQTSGTDFPSPAGRELILRTSVP 943

Query: 305 RPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           RPAP S+  P ++ +++   D   ++G F+ DT F
Sbjct: 944 RPAPYSKVLPQRMYSVLTKED-FRLTGAFSSDTSF 977

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP.
Xenopus laevis (taxid: 8355)

>sp|P69735|RB3GP_RAT Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus GN=Rab3gap1 PE=1 SV=2

 Score =  232 bits (591), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 188/337 (55%), Gaps = 23/337 (6%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct: 441 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRD 500

Query: 83  FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
           +IE    D+ G    KG LSARM +P N W E WE AKPVPARRQRRLF+DT+EAEK+LH
Sbjct: 501 YIEEEVTDEKGNVVLKGELSARMKIPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLH 560

Query: 141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
               Q P  +A  L+P +IH AV ++ E      +PS+ ++   +I       R    E 
Sbjct: 561 YLAMQKPADLARHLLPCVIHAAVLKVKEEESLENIPSVKKIIKQIIAHSSKVLRFPSPED 620

Query: 201 KRYQDICSEIGQIEALVSQYHSLHHKLSP-----DNNDASTQQFLADLVMNPSSIIQVPE 255
           K+ ++I  +I  +EA++++  SL  K        +      ++F++ L+  P   + V  
Sbjct: 621 KKLEEIILQITTVEAIIARARSLKAKFGTEKCEHEEEKEDLERFVSCLLEQPE--VAVTG 678

Query: 256 GPHGVIGKRMSQMFYEAQKDTDV------WKLPASP-------FSPLPSPACREFILRVV 302
              G  G+ + ++F  AQ+   V       K    P        S  P PA RE ILR  
Sbjct: 679 AGRGHAGRIIHKLFVNAQRAAAVALPEEELKRSGCPEERRQTLVSDFPPPAGRELILRAT 738

Query: 303 APRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
            PRPAP S+  P ++ +++   D   ++G F+ DT F
Sbjct: 739 VPRPAPYSKALPQRMYSVLTKED-FRLAGAFSSDTSF 774

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.

Rattus norvegicus (taxid: 10116)

>sp|Q15042|RB3GP_HUMAN Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens GN=RAB3GAP1 PE=1 SV=3

 Score =  231 bits (589), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 189/337 (56%), Gaps = 23/337 (6%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct: 647 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRD 706

Query: 83  FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
           +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct: 707 YIEEEVIDEKGNVVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 766

Query: 141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
               Q P  +A  L+P +IH AV ++ E      + S+ ++   +I            E 
Sbjct: 767 YLAIQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPED 826

Query: 201 KRYQDICSEIGQIEALVSQYHSLHHKLSP-----DNNDASTQQFLADLVMNPSSIIQVPE 255
           K+ ++I  +I  +EAL+++  SL  K        +      ++F++ L+  P   + V  
Sbjct: 827 KKLEEIIHQITNVEALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPE--VLVTG 884

Query: 256 GPHGVIGKRMSQMFYEAQKDT------DVWKLPASP-------FSPLPSPACREFILRVV 302
              G  G+ + ++F  AQ+        +  K   SP        S  P PA REFILR  
Sbjct: 885 AGRGHAGRIIHKLFVNAQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTT 944

Query: 303 APRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
            PRPAP S+  P ++ +++   D   ++G F+ DT F
Sbjct: 945 VPRPAPYSKALPQRMYSVLTKED-FRLAGAFSSDTSF 980

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.

Homo sapiens (taxid: 9606)

>sp|Q80UJ7|RB3GP_MOUSE Rab3 GTPase-activating protein catalytic subunit OS=Mus musculus GN=Rab3gap1 PE=2 SV=4

 Score =  231 bits (589), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 187/338 (55%), Gaps = 25/338 (7%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct: 647 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 706

Query: 83  FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
           +IE    D+ G    KG LSARM +P N W E WE AKPVPARRQRRLF+DT+EAEK+LH
Sbjct: 707 YIEEEVTDEKGNVVLKGELSARMKIPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLH 766

Query: 141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
               Q P  +A  L+P +IH AV ++ E      +PS+ ++   +I            E 
Sbjct: 767 YLAMQKPADLARHLLPCVIHAAVLKVKEEESLENIPSVKKIIKQIIAHSSKVLHFPNPED 826

Query: 201 KRYQDICSEIGQIEALVSQYHSLHHKLSP-----DNNDASTQQFLADLVMNPSSIIQVPE 255
           K+ ++I  +I  +EA++++  SL  K        +      ++F++ L+  P   + V  
Sbjct: 827 KKLEEIILQITTVEAIIARARSLKAKFGTEKCEHEEEKEGLERFVSCLLEQPE--VSVTG 884

Query: 256 GPHGVIGKRMSQMFYEAQKDTDVWKLPASPF--------------SPLPSPACREFILRV 301
              G  G+ + ++F  AQ+   V  LP                  S  P PA RE ILR 
Sbjct: 885 AGRGHAGRIIHKLFVNAQRAAAV-ALPEEELKKSGCPEERRQTLVSDFPPPAGRELILRA 943

Query: 302 VAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
             PRPAP S+  P ++ +++   D   ++G F+ DT F
Sbjct: 944 TVPRPAPYSKALPQRMYSVLTKED-FRLAGAFSSDTSF 980

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.

Mus musculus (taxid: 10090)

>sp|Q6NUV0|RB3GP_DANRE Rab3 GTPase-activating protein catalytic subunit OS=Danio rerio GN=rab3gap1 PE=2 SV=2

 Score =  218 bits (554), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 185/335 (55%), Gaps = 19/335 (5%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  L DF+RWYSPRD
Sbjct: 635 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCTLLDFVRWYSPRD 694

Query: 83  FIESSELDQYG--QKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
           ++E    D  G  + +G LSARM +PGN W E WE A+  PARRQ+RLF+DTKEAEK+LH
Sbjct: 695 YVEEQVTDADGRVEVRGELSARMKIPGNMWVEAWETARATPARRQKRLFDDTKEAEKVLH 754

Query: 141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
               Q P  +   L+P ++H A+ ++ E   +  +PS+      +        R    E 
Sbjct: 755 YLALQKPSELTRHLLPCVLHAALLKIKEEESAEDLPSVRSSLQQISSSASKILRHPNPEF 814

Query: 201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE----- 255
           K+ +D+ S++  +EA++++  SL  K      +   ++   +L    SS+++ PE     
Sbjct: 815 KKLEDVISQLMAVEAVIARARSLKAKFGVCGGEREREEDGDELERFVSSLLEEPEVCVSG 874

Query: 256 GPHGVIGKRMSQMFYEAQK-------DTDVWKLPAS----PFSPLPSPACREFILRVVAP 304
              G  G  + ++F  +Q+       + +  +   S     F   P PA RE +LR   P
Sbjct: 875 AGRGPAGNVIHKLFVSSQRAALLAPMEEETLRSGGSDDRKAFPDFPPPAGREILLRTCVP 934

Query: 305 RPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           RPAP S+  P +L  ++M  D   ++G F+ DT F
Sbjct: 935 RPAPYSKALPQRLFCVLMR-DEFRLAGAFSSDTSF 968

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP.

Danio rerio (taxid: 7955)

>sp|Q9VQ26|RB3GP_DROME Rab3 GTPase-activating protein catalytic subunit OS=Drosophila melanogaster GN=CG31935 PE=1 SV=2

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/159 (49%), Positives = 105/159 (66%), Gaps = 5/159 (3%)

Query: 20  VIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYS 79
           V KTEDQ+++DAE +L LG     S L  ++M  SLLSDME+FKAANP  I+EDFIRWYS
Sbjct: 608 VPKTEDQLQDDAEVMLKLGP---GSGLTTQMMCTSLLSDMEAFKAANPRGIMEDFIRWYS 664

Query: 80  PRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKIL 139
           P+D+ E +  D+ GQ K  LS RM   GNTW++VWE A+ VP  RQ+RLF+DT EA K+L
Sbjct: 665 PKDWEEVT--DELGQVKHQLSIRMTTEGNTWQKVWEQAQAVPVSRQKRLFDDTNEALKVL 722

Query: 140 HLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSL 178
           H  E +    +  L V  L+H A+ +L + + +  +  L
Sbjct: 723 HYLETRKMHEIYNLTVIPLLHSAILKLADILSNAELEDL 761

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP.

Drosophila melanogaster (taxid: 7227)

>sp|Q93538|RB3GP_CAEEL Rab3 GTPase-activating protein catalytic subunit OS=Caenorhabditis elegans GN=rbg-1 PE=3 SV=1

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 14/146 (9%)

Query: 23  TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
           T++ I+   E L SL       + R  L    + SDM+SFKAAN GA+  DF+RW+SP+D
Sbjct: 602 TDEMIDARNEHLFSL-----DEEDRVHLQMELVKSDMQSFKAANAGAVFADFLRWHSPKD 656

Query: 83  FIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLF 142
                    Y +K  ++S RML+  N W   WEAA P+P   Q R+FNDTK AE+IL +F
Sbjct: 657 ---------YDEKTNTISERMLISNNVWVRSWEAALPIPVANQARIFNDTKIAEEILEIF 707

Query: 143 ECQSPGSVAVLLVPALIHGAVSRLLE 168
              +   V   + P +    + RL E
Sbjct: 708 NNATLDQVREWMKPTVFAATLERLTE 733

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
380016928	448	PREDICTED: rab3 GTPase-activating protei	0.955	0.725	0.469	3e-82
328792063	924	PREDICTED: rab3 GTPase-activating protei	0.955	0.351	0.469	4e-82
340712472	924	PREDICTED: rab3 GTPase-activating protei	0.947	0.348	0.460	3e-79
350399810	924	PREDICTED: rab3 GTPase-activating protei	0.947	0.348	0.460	4e-79
383850096	924	PREDICTED: rab3 GTPase-activating protei	0.955	0.351	0.451	9e-79
307205377	477	Rab3 GTPase-activating protein catalytic	0.955	0.681	0.451	5e-77
307188225	428	Rab3 GTPase-activating protein catalytic	0.955	0.759	0.454	2e-76
345480061	919	PREDICTED: rab3 GTPase-activating protei	0.961	0.355	0.45	4e-73
332025779	434	Rab3 GTPase-activating protein catalytic	0.929	0.728	0.438	3e-71
270007054	435	hypothetical protein TcasGA2_TC013503 [T	0.929	0.726	0.410	2e-64

>gi|380016928|ref|XP_003692419.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like [Apis florea]

 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 160/341 (46%), Positives = 226/341 (66%), Gaps = 16/341 (4%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA+LMSASLLSDMESFKAANPG
Sbjct: 113 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTDKHASEMRARLMSASLLSDMESFKAANPG 170

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+IE  E+D++GQ KG LSARML+P N W   W +A+PVPA RQ+RL
Sbjct: 171 AVLEDFIRWYSPRDWIEEDEIDEWGQLKGHLSARMLIPNNPWSTTWNSAQPVPAHRQKRL 230

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G +A LL+P L H A+  L E      +P+L  +AS ++ +
Sbjct: 231 FDDTREAEKALHFLSTKRIGQIAQLLLPTLTHAALHTLSEQKQDA-LPNLLDVASSILNK 289

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L  Y++I  +I  IEALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 290 LQYATKPIHQKLYIYEEIIRDIEGIEALVAQVNSLQHKLGGNNDSKEFTSFLVQLMRGKE 349

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK----------DTDVWKLPASPFSPLPSPACREFI 298
             ++VP+G  G IG R++ MF +AQK          + ++  +  S F   P P C+EFI
Sbjct: 350 --VEVPDGSRGNIGSRITTMFRDAQKAALVMSSLNINPEIDAIGDSKFKSFPEPCCKEFI 407

Query: 299 LRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           LR+V PRP+P+S   P +L  + +  D + ++G F++DT+F
Sbjct: 408 LRIVTPRPSPTSTAQPQRLY-VCLKRDDIRLAGFFSEDTIF 447

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792063|ref|XP_395106.3| PREDICTED: rab3 GTPase-activating protein catalytic subunit [Apis mellifera]

 Score =  311 bits (796), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 160/341 (46%), Positives = 226/341 (66%), Gaps = 16/341 (4%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA+LMSASLLSDMESFKAANPG
Sbjct: 589 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTDKHASEMRARLMSASLLSDMESFKAANPG 646

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+IE  E+D++GQ KG LSARML+P N W   W +A+PVPA RQ+RL
Sbjct: 647 AVLEDFIRWYSPRDWIEEDEIDEWGQLKGHLSARMLIPNNPWSTTWNSAQPVPAHRQKRL 706

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G +A LL+P L H A+  L E      +P+L  +AS ++ +
Sbjct: 707 FDDTREAEKALHFLSTKRIGQIAQLLLPTLTHAALHTLSEQKQDA-LPNLLDVASSILNK 765

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L  Y++I  +I  IEALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 766 LQYATKPIHQKLYIYEEIFRDIEGIEALVAQVNSLQHKLGGNNDSKEFTSFLVQLMRGKE 825

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK----------DTDVWKLPASPFSPLPSPACREFI 298
             ++VP+G  G IG R++ MF +AQK          + ++  +  S F   P P C+EFI
Sbjct: 826 --VEVPDGSRGNIGSRITTMFRDAQKAALVMPSLNINPEIDAIGDSKFKSFPEPCCKEFI 883

Query: 299 LRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           LR+V PRP+P+S   P +L  + +  D + ++G F++DT+F
Sbjct: 884 LRIVTPRPSPTSTAQPQRL-YVCLKRDDIRLAGFFSEDTIF 923

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712472|ref|XP_003394783.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like [Bombus terrestris]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 21/343 (6%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGT   +S++RA+LMSASLLSDMESFKAANPG
Sbjct: 590 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTSKHASEMRARLMSASLLSDMESFKAANPG 647

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+IE    D++GQ KG LSARML+P N W   W +A PVPA RQ+RL
Sbjct: 648 AVLEDFIRWYSPRDWIEEDVTDEWGQPKGHLSARMLIPNNPWSTTWSSALPVPAHRQKRL 707

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G +A LL+PAL H A+  L E      +P+L  +   ++ +
Sbjct: 708 FDDTREAEKALHFLSTKRIGQIAQLLLPALTHAALYTLSEQKQDA-LPNLPDVTISILNK 766

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L  Y++I  ++  +EALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 767 LQYATKPIHQKLHVYEEIIRDVEGVEALVAQVNSLQHKLGGNNDSKEFTSFLIQLMRGKE 826

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK------------DTDVWKLPASPFSPLPSPACRE 296
             + VP G +G IG R++ MF +AQK            D DV       F   P P C+E
Sbjct: 827 --VDVPGGSNGNIGSRITTMFRDAQKAALIMTSLNSNPDVDV---AGDKFKTFPEPCCKE 881

Query: 297 FILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           FILR+V PRP+P+S P P +L  + +  D + ++G F++DT+F
Sbjct: 882 FILRIVTPRPSPTSTPQPQRL-YVCLKRDDIRLAGFFSKDTIF 923

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399810|ref|XP_003485646.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like [Bombus impatiens]

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 21/343 (6%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGT   +S++RA+LMSASLLSDMESFKAANPG
Sbjct: 590 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTSKHASEMRARLMSASLLSDMESFKAANPG 647

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+IE    D++GQ KG LSARML+P N W   W +A PVPA RQ+RL
Sbjct: 648 AVLEDFIRWYSPRDWIEEDVTDEWGQPKGHLSARMLIPNNPWSTTWSSALPVPAHRQKRL 707

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G +A LL+PAL H A+  L E      +P+L  +   ++ +
Sbjct: 708 FDDTREAEKALHFLSTKRIGQIAQLLLPALTHAALYTLSEQKQDA-LPNLPDVTISILNK 766

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L  Y++I  ++  +EALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 767 LQYATKPIHQKLHVYEEIIRDVEGVEALVAQVNSLQHKLGGNNDSKEFTSFLIQLMRGKE 826

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK------------DTDVWKLPASPFSPLPSPACRE 296
             + VP G +G IG R++ MF +AQK            D DV       F   P P C+E
Sbjct: 827 --VDVPGGSNGNIGSRITTMFRDAQKAALIMTSLNSNPDVDV---AGDKFKTFPEPCCKE 881

Query: 297 FILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           FILR+V PRP+P+S P P +L  + +  D + ++G F++DT+F
Sbjct: 882 FILRIVTPRPSPTSTPQPQRL-YVCLKRDDIRLAGFFSKDTIF 923

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850096|ref|XP_003700653.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit [Megachile rotundata]

 Score =  300 bits (767), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 154/341 (45%), Positives = 223/341 (65%), Gaps = 16/341 (4%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA+LMSASLLSDMESFKAANPG
Sbjct: 589 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTDKHASEMRARLMSASLLSDMESFKAANPG 646

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+IE    D++GQ  G LSARML+P N W   W +A+PVPA RQ+RL
Sbjct: 647 AVLEDFIRWYSPRDWIEDDGTDEWGQPTGHLSARMLIPNNPWSTTWSSAQPVPAHRQKRL 706

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G +A LL+PAL H A+  L +      +P+L  +A  ++ +
Sbjct: 707 FDDTREAEKALHFLSSKRIGQIAQLLLPALNHAALYTLSQQKQDA-LPNLPEVALSILNK 765

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L  Y++I  +I  IEALV+Q +SL HKL  +++      FL  L+    
Sbjct: 766 LQYATKPIHQKLHLYEEITRDIEGIEALVAQVNSLQHKLGGNDDSKEFTSFLIQLMRGKE 825

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK----------DTDVWKLPASPFSPLPSPACREFI 298
             ++VP G  G IG R++ MF +AQK          + D+  +  +     P P+C+EFI
Sbjct: 826 --VEVPGGSRGNIGSRITTMFRDAQKAALIMTSLNSNADIDAIGDNKLKTFPEPSCKEFI 883

Query: 299 LRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           LR++ PRP+P+S P P ++ A  +  D + ++G F++D++F
Sbjct: 884 LRIITPRPSPTSTPQPQRMYA-CLKRDYIRLAGFFSEDSIF 923

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205377|gb|EFN83718.1| Rab3 GTPase-activating protein catalytic subunit [Harpegnathos saltator]

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 154/341 (45%), Positives = 218/341 (63%), Gaps = 16/341 (4%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  ++ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA++MSASLLSDMESFKAANPG
Sbjct: 142 LYLPVTQD--PVPKTEDQLEEDAQVMMQLGTDKYASEMRARMMSASLLSDMESFKAANPG 199

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+I+   LD++GQ KG LS RM++P N W   W +A+PVPA RQ+RL
Sbjct: 200 AVLEDFIRWYSPRDWIDDEGLDEWGQGKGHLSLRMMIPDNPWSTTWASAQPVPAHRQKRL 259

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK+LH    +  G VA LL+P L H A+   L +     +PSL  +A  ++ R
Sbjct: 260 FDDTREAEKVLHYLCSKRIGQVAQLLLPTLTHAALY-TLSSQKQEALPSLPDVAQSILNR 318

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           ++FAT+ +  +L  Y++I  +I  +EALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 319 LQFATKPTHQKLNLYEEITRDIEGVEALVAQVNSLQHKLGGNNDSKEFTSFLIQLMRGKE 378

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK----------DTDVWKLPASPFSPLPSPACREFI 298
             + VP G  G IG  ++ MF +AQ+          + D      S     P P+ +EFI
Sbjct: 379 --VNVPGGSRGDIGSHITMMFRDAQRAVYMMTSTSGNNDADAARDSRHKTFPEPSSKEFI 436

Query: 299 LRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           LR + PRP+P+S P P +L A +   D + ++G F++DT F
Sbjct: 437 LRAIIPRPSPASTPQPQRLYACLKR-DHIRLAGFFSEDTTF 476

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188225|gb|EFN73057.1| Rab3 GTPase-activating protein catalytic subunit [Camponotus floridanus]

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/343 (45%), Positives = 221/343 (64%), Gaps = 18/343 (5%)

Query: 8   ILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANP 67
           +LY  I+ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA++MSASLLSDMESFKAANP
Sbjct: 92  LLYLPITQD--PVPKTEDQLEEDAQVMMQLGTDKYASEMRARMMSASLLSDMESFKAANP 149

Query: 68  GAILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRR 127
           GAILEDFIRWYSPRD+I+   LD++GQ KG LS RM++P N W   W +A+PVPA RQ+R
Sbjct: 150 GAILEDFIRWYSPRDWIDDEGLDEWGQGKGHLSPRMMIPDNPWSTTWTSAQPVPAHRQKR 209

Query: 128 LFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIK 187
           LF+DT+EAEK LH    +  G VA LL+P+L H A+   L +     +PSL  +A  ++ 
Sbjct: 210 LFDDTREAEKALHYLCSKRIGQVAQLLLPSLTHAAL-HTLSSQKQEALPSLPDVAQSILN 268

Query: 188 RVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNP 247
           +++FAT+    +L+ Y++I  ++  +EALV+Q +SL HKL   ++   T  FL  L+   
Sbjct: 269 KLQFATKPIHQKLQLYEEITRDVESVEALVAQVNSLQHKLGGKDSKEFT-SFLIQLMRGK 327

Query: 248 SSIIQVPEGPHGVIGKRMSQMFYEAQK----------DTDVWKLPASP-FSPLPSPACRE 296
              + VP G  G IG R+  MF++AQK          + D         +   P P+C+E
Sbjct: 328 E--VSVPGGSRGDIGTRIITMFHDAQKAAHMMTSVNSNNDAASAAGDGRYKTFPEPSCKE 385

Query: 297 FILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           FILR + PRP+P+S P P +L A +   D + ++G F++DT F
Sbjct: 386 FILRAIMPRPSPASTPQPQRLYACLKR-DHIRLAGFFSEDTTF 427

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480061|ref|XP_003424078.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nasonia vitripennis]

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 212/340 (62%), Gaps = 13/340 (3%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  ++ D   V KTEDQ+EEDA+ ++ LGTD   S++RA+LMSASLLSDMESFKAANP 
Sbjct: 583 LYLPVTQD--PVPKTEDQLEEDAQVMMQLGTDKAGSEMRARLMSASLLSDMESFKAANPS 640

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
             LEDFIRWYSPRD+IE    D++GQ  G LS RML+  N W   W++A+PVPA RQ+RL
Sbjct: 641 GQLEDFIRWYSPRDWIEEDGQDEWGQPAGHLSPRMLIANNPWSSTWDSARPVPAHRQKRL 700

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G V  LL+P L H A+  L E      +PSL  +   +  R
Sbjct: 701 FDDTREAEKALHYLASKRLGQVGQLLLPVLAHSALVTLHEQKVDA-LPSLPDVVQAIHNR 759

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLV-MNP 247
           ++FA++    +L+ Y++I  +I  +EAL++Q +SL  KL+    D+  ++  A LV +  
Sbjct: 760 LQFASKPINQKLQIYEEITRDIENVEALIAQVNSLQLKLAGGEGDSGDKELTAFLVQLMR 819

Query: 248 SSIIQVPEGPHGVIGKRMSQMFYEAQK--------DTDVWKLPASPFSPLPSPACREFIL 299
              + VP+GP G IG R+S+MF +AQK         T+   +    F P P P  +EF+L
Sbjct: 820 GKEVSVPKGPRGTIGARISKMFSDAQKAAYMMTTSHTEAEVIAEGKFKPFPMPTSKEFVL 879

Query: 300 RVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           R +APRP P S   P +L   I   D + M+G F++DT+F
Sbjct: 880 RAMAPRPTPCSAMQPQRLYVSI-DRDCIRMAGAFSEDTIF 918

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025779|gb|EGI65936.1| Rab3 GTPase-activating protein catalytic subunit [Acromyrmex echinatior]

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/342 (43%), Positives = 212/342 (61%), Gaps = 26/342 (7%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPG 68
           LY  I+ D   V KTEDQ+EEDA+ ++ LGTD  +S++RA++MSASLLSDMESFKAANPG
Sbjct: 107 LYLPITQD--PVPKTEDQLEEDAQVMMQLGTDKYASEMRARMMSASLLSDMESFKAANPG 164

Query: 69  AILEDFIRWYSPRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRL 128
           A+LEDFIRWYSPRD+I+          +G LS RM++  N W   W +A+PVPA RQ+RL
Sbjct: 165 AVLEDFIRWYSPRDWIDD---------EGHLSPRMMITDNPWSTTWASAQPVPAHRQKRL 215

Query: 129 FNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKR 188
           F+DT+EAEK LH    +  G VA LL+P L H A+   L       +PSL  +A  ++ +
Sbjct: 216 FDDTREAEKALHYLCSKRIGQVAQLLLPTLTHAALY-TLSLQKQEALPSLPDVAQSILNK 274

Query: 189 VEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPS 248
           +++AT+    +L+ Y++I  +I  +EALV+Q +SL HKL  +N+      FL  L+    
Sbjct: 275 LQYATKPIHQKLQLYEEITRDIESVEALVAQVNSLQHKLGGNNDSKEFTSFLIQLMRGKE 334

Query: 249 SIIQVPEGPHGVIGKRMSQMFYEAQK-----------DTDVWKLPASPFSPLPSPACREF 297
             + VP G  G IG R++ MF +AQK           + D      S +   P P+C+EF
Sbjct: 335 --VSVPGGSRGDIGARITTMFRDAQKAAHMMTSVSNINKDTINAEDSRYKIFPEPSCKEF 392

Query: 298 ILRVVAPRPAPSSRPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
           ILR + PRP+PSS P P +L  + +  D + ++G F++DT F
Sbjct: 393 ILRAMIPRPSPSSTPQPQRL-YVCLKRDHIRLAGFFSEDTTF 433

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007054|gb|EFA03502.1| hypothetical protein TcasGA2_TC013503 [Tribolium castaneum]

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/329 (41%), Positives = 200/329 (60%), Gaps = 13/329 (3%)

Query: 20  VIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYS 79
           V K+EDQ+EED + LL LG+D + S+LRAK+MSASLLSDMESFKAANPG++LEDFIRWYS
Sbjct: 110 VPKSEDQLEEDTDVLLKLGSDAQGSELRAKMMSASLLSDMESFKAANPGSVLEDFIRWYS 169

Query: 80  PRDFIESSELDQYGQKKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKIL 139
           PRD+IES ELD++GQKKG LS+RM++  N W + W++AKPVPA RQ+RLF+DT+EAEK+L
Sbjct: 170 PRDWIESEELDEWGQKKGELSSRMMIEDNFWVQTWDSAKPVPAHRQKRLFDDTREAEKVL 229

Query: 140 HLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEME 199
           H  + +S   +  +L+P L H A+ R+ E      +   G     L+K  E  +R S+++
Sbjct: 230 HFLDSRSLCQICEMLIPVLCHIAIYRVGEE-RPRELADAGERLRALVKTAERISRESKLQ 288

Query: 200 LKRYQDICSEIGQIEALVSQYHSLHHKLSPDNN-DASTQQFLADLVMNPSSIIQVPEGPH 258
            +R++    E+  +E   SQ +SL +K +P    D +    +  LV      +++ +   
Sbjct: 289 PRRFEGFIQEVTALELRTSQVNSLMYKFNPAGAVDENLSNLIGKLVSGRE--VEIADRVD 346

Query: 259 GVIGKRMSQMFYEAQKDTDVWKLPASP--------FSPLPSPACREFILRVVAPRPAPSS 310
             +G R+  MF +AQK  ++     +          +  P  + RE ++RV  PRPA  S
Sbjct: 347 STLGNRIVGMFSDAQKAANMILTEQATEDGKSVKGNAAFPQASEREIVMRVSVPRPATYS 406

Query: 311 RPTPHKLTALIMAPDSLIMSGCFTQDTMF 339
              P  L A ++      + G F++D +F
Sbjct: 407 AECPQFLRA-VLGKSEFRLVGAFSEDIVF 434

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
UNIPROTKB|C9J837	988	RAB3GAP1 "Rab3 GTPase-activati	0.744	0.256	0.423	8.1e-51
UNIPROTKB|E2RK37	979	RAB3GAP1 "Uncharacterized prot	0.744	0.258	0.423	9.3e-51
UNIPROTKB|E1BT09	988	RAB3GAP1 "Uncharacterized prot	0.732	0.252	0.430	5.6e-50
RGD|1306487	775	RGD1306487 "similar to RAB3 GT	0.735	0.322	0.432	2e-49
UNIPROTKB|J9NVN6	878	RAB3GAP1 "Uncharacterized prot	0.735	0.284	0.424	6.4e-49
UNIPROTKB|F1S0D4	868	RAB3GAP1 "Uncharacterized prot	0.735	0.288	0.429	7.8e-49
MGI|MGI:2445001	981	Rab3gap1 "RAB3 GTPase activati	0.735	0.254	0.424	2.1e-48
UNIPROTKB|A4FUE5	982	RAB3GAP1 "RAB3GAP1 protein" [B	0.735	0.254	0.420	2.8e-48
UNIPROTKB|A6H8Z3	935	RAB3GAP1 "Rab3 GTPase-activati	0.735	0.267	0.424	2.9e-48
UNIPROTKB|Q15042	981	RAB3GAP1 "Rab3 GTPase-activati	0.735	0.254	0.424	3.5e-48

UNIPROTKB|C9J837 RAB3GAP1 "Rab3 GTPase-activating protein catalytic subunit" [Homo sapiens (taxid:9606)]

 Score = 515 (186.3 bits), Expect = 8.1e-51, Sum P(2) = 8.1e-51
 Identities = 111/262 (42%), Positives = 156/262 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   647 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRD 706

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   707 YIEEEVIDEKGNVVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 766

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      + S+ ++   +I            E 
Sbjct:   767 YLAIQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPED 826

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE----- 255
             K+ ++I  +I  +EAL+++  SL  K   +  +   ++   DL    S +++ PE     
Sbjct:   827 KKLEEIIHQITNVEALIARARSLKAKFGTEKCEQEEEK--EDLERFVSCLLEQPEVLVTG 884

Query:   256 GPHGVIGKRMSQMFYEAQKDTD 277
                G  G+ + ++F  AQ+ T+
Sbjct:   885 AGRGHAGRIIHKLFVNAQRLTE 906

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|E2RK37 RAB3GAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 520 (188.1 bits), Expect = 9.3e-51, Sum P(2) = 9.3e-51
 Identities = 111/262 (42%), Positives = 158/262 (60%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   638 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 697

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   698 YIEEEVVDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 757

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E  +   + S+ ++   +I            E 
Sbjct:   758 YLAVQKPADLARHLLPCVIHAAVLKVKEEENLENISSVKKIIKQIITHSSKVLHFPNPED 817

Query:   201 KRYQDICSEIGQIEALVSQYHSLH-----HKLSPDNNDASTQQFLADLVMNPSSIIQVPE 255
             K+ ++I  +I  +EA++++  SL       K   +      ++F++ L+  P  ++ V  
Sbjct:   818 KKLEEIIHQITNVEAIIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLV-VGA 876

Query:   256 GPHGVIGKRMSQMFYEAQKDTD 277
             G  G  GK + ++F  AQ+ T+
Sbjct:   877 G-RGHAGKIIHKLFVNAQRLTE 897

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|E1BT09 RAB3GAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 516 (186.7 bits), Expect = 5.6e-50, Sum P(2) = 5.6e-50
 Identities = 112/260 (43%), Positives = 158/260 (60%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   652 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRD 711

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKPVPARRQ+RLF+DT+EAEK+LH
Sbjct:   712 YIEEEVVDEKGNVVIKGELSARMKIPSNMWVEAWETAKPVPARRQKRLFDDTREAEKVLH 771

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      + S+ ++   +I       R    E 
Sbjct:   772 YLAVQKPADLARHLLPCIIHAAVLKVKEEEVLENISSVKKIIKQIISHSSKVLRFPNPED 831

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDN--NDAST---QQFLADLVMNPS-SIIQVP 254
             K+ ++I ++I  +EA++++  SL  K   +   N+      Q+F+  L+  P  S++   
Sbjct:   832 KKLEEIIAQIMSVEAIIARARSLKAKFGVEKCENEEEKEDLQRFVNCLLEQPEVSVLGAG 891

Query:   255 EGPHGVIGKRMSQMFYEAQK 274
              GP G +   + ++F  AQ+
Sbjct:   892 RGPAGSV---IHKLFVNAQR 908

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

RGD|1306487 RGD1306487 "similar to RAB3 GTPase-activating protein" [Rattus norvegicus (taxid:10116)]

 Score = 518 (187.4 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 112/259 (43%), Positives = 155/259 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   441 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRD 500

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE    D+ G    KG LSARM +P N W E WE AKPVPARRQRRLF+DT+EAEK+LH
Sbjct:   501 YIEEEVTDEKGNVVLKGELSARMKIPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLH 560

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      +PS+ ++   +I       R    E 
Sbjct:   561 YLAMQKPADLARHLLPCVIHAAVLKVKEEESLENIPSVKKIIKQIIAHSSKVLRFPSPED 620

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE----- 255
             K+ ++I  +I  +EA++++  SL  K   +  +   ++   DL    S +++ PE     
Sbjct:   621 KKLEEIILQITTVEAIIARARSLKAKFGTEKCEHEEEK--EDLERFVSCLLEQPEVAVTG 678

Query:   256 GPHGVIGKRMSQMFYEAQK 274
                G  G+ + ++F  AQ+
Sbjct:   679 AGRGHAGRIIHKLFVNAQR 697

GO:0005097 "Rab GTPase activator activity" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0032851 "positive regulation of Rab GTPase activity" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IDA;IPI

GO:0060076 "excitatory synapse" evidence=IDA

UNIPROTKB|J9NVN6 RAB3GAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 517 (187.1 bits), Expect = 6.4e-49, P = 6.4e-49
 Identities = 110/259 (42%), Positives = 156/259 (60%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   544 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 603

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   604 YIEEEVVDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 663

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E  +   + S+ ++   +I            E 
Sbjct:   664 YLAVQKPADLARHLLPCVIHAAVLKVKEEENLENISSVKKIIKQIITHSSKVLHFPNPED 723

Query:   201 KRYQDICSEIGQIEALVSQYHSLH-----HKLSPDNNDASTQQFLADLVMNPSSIIQVPE 255
             K+ ++I  +I  +EA++++  SL       K   +      ++F++ L+  P  ++ V  
Sbjct:   724 KKLEEIIHQITNVEAIIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLV-VGA 782

Query:   256 GPHGVIGKRMSQMFYEAQK 274
             G  G  GK + ++F  AQ+
Sbjct:   783 G-RGHAGKIIHKLFVNAQR 800

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|F1S0D4 RAB3GAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 516 (186.7 bits), Expect = 7.8e-49, P = 7.8e-49
 Identities = 112/261 (42%), Positives = 158/261 (60%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   532 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 591

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   592 YIEEEVIDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 651

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEA-IHSVP-VPSLGRMASHLIKRVEFATRCSEM 198
                 Q P  +A  L+P +IH AV ++ E  I S+  + S+ ++   +I         S  
Sbjct:   652 YLAVQKPADLARHLLPCVIHAAVLKVKEEEIESLENISSVKKIIKQIISHSSKVLHFSNP 711

Query:   199 ELKRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE--- 255
             E K+ ++I  +I  +EA++++  SL  K   +  +   ++   DL    S +++ PE   
Sbjct:   712 EDKKLEEIIHQITNVEAVIARARSLKAKFGTEKCEQEEEK--DDLERFVSCLLEQPEVLV 769

Query:   256 --GPHGVIGKRMSQMFYEAQK 274
                  G  G+ + ++F  AQ+
Sbjct:   770 AGAGRGHAGRIIHKLFVNAQR 790

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

MGI|MGI:2445001 Rab3gap1 "RAB3 GTPase activating protein subunit 1" [Mus musculus (taxid:10090)]

 Score = 514 (186.0 bits), Expect = 2.1e-48, P = 2.1e-48
 Identities = 110/259 (42%), Positives = 154/259 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   647 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 706

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE    D+ G    KG LSARM +P N W E WE AKPVPARRQRRLF+DT+EAEK+LH
Sbjct:   707 YIEEEVTDEKGNVVLKGELSARMKIPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLH 766

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      +PS+ ++   +I            E 
Sbjct:   767 YLAMQKPADLARHLLPCVIHAAVLKVKEEESLENIPSVKKIIKQIIAHSSKVLHFPNPED 826

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNND-----ASTQQFLADLVMNPSSIIQVPE 255
             K+ ++I  +I  +EA++++  SL  K   +  +        ++F++ L+  P   + V  
Sbjct:   827 KKLEEIILQITTVEAIIARARSLKAKFGTEKCEHEEEKEGLERFVSCLLEQPE--VSVTG 884

Query:   256 GPHGVIGKRMSQMFYEAQK 274
                G  G+ + ++F  AQ+
Sbjct:   885 AGRGHAGRIIHKLFVNAQR 903

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0007420 "brain development" evidence=ISO

GO:0017137 "Rab GTPase binding" evidence=ISO

GO:0021854 "hypothalamus development" evidence=ISO

GO:0032851 "positive regulation of Rab GTPase activity" evidence=ISO

GO:0043010 "camera-type eye development" evidence=ISO

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0060325 "face morphogenesis" evidence=ISO

UNIPROTKB|A4FUE5 RAB3GAP1 "RAB3GAP1 protein" [Bos taurus (taxid:9913)]

 Score = 513 (185.6 bits), Expect = 2.8e-48, P = 2.8e-48
 Identities = 109/259 (42%), Positives = 155/259 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   648 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRD 707

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   708 YIEEEVVDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 767

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      + S+ ++   +I            E 
Sbjct:   768 YLAVQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPED 827

Query:   201 KRYQDICSEIGQIEALVSQYHSLH-----HKLSPDNNDASTQQFLADLVMNPSSIIQVPE 255
             K+ ++I  +I  +EA++++  SL       K   +      ++F++ L+  P  ++ V  
Sbjct:   828 KKLEEIIHQITNVEAIIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLV-VGA 886

Query:   256 GPHGVIGKRMSQMFYEAQK 274
             G  G  G+ + ++F  AQ+
Sbjct:   887 G-RGHAGRIIHKLFVNAQR 904

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|A6H8Z3 RAB3GAP1 "Rab3 GTPase-activating protein catalytic subunit" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 110/259 (42%), Positives = 154/259 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   603 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRD 662

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   663 YIEEEVIDEKGNVVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 722

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      + S+ ++   +I            E 
Sbjct:   723 YLAIQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPED 782

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE----- 255
             K+ ++I  +I  +EAL+++  SL  K   +  +   ++   DL    S +++ PE     
Sbjct:   783 KKLEEIIHQITNVEALIARARSLKAKFGTEKCEQEEEK--EDLERFVSCLLEQPEVLVTG 840

Query:   256 GPHGVIGKRMSQMFYEAQK 274
                G  G+ + ++F  AQ+
Sbjct:   841 AGRGHAGRIIHKLFVNAQR 859

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|Q15042 RAB3GAP1 "Rab3 GTPase-activating protein catalytic subunit" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 3.5e-48, P = 3.5e-48
 Identities = 110/259 (42%), Positives = 154/259 (59%)

Query:    23 TEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRD 82
             TED +EE +E L  LGT  E + LRA++ SA LLSDMESFKAANPG  LEDF+RWYSPRD
Sbjct:   647 TEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRD 706

Query:    83 FIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILH 140
             +IE   +D+ G    KG LSARM +P N W E WE AKP+PARRQRRLF+DT+EAEK+LH
Sbjct:   707 YIEEEVIDEKGNVVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLH 766

Query:   141 LFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMEL 200
                 Q P  +A  L+P +IH AV ++ E      + S+ ++   +I            E 
Sbjct:   767 YLAIQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPED 826

Query:   201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVMNPSSIIQVPE----- 255
             K+ ++I  +I  +EAL+++  SL  K   +  +   ++   DL    S +++ PE     
Sbjct:   827 KKLEEIIHQITNVEALIARARSLKAKFGTEKCEQEEEK--EDLERFVSCLLEQPEVLVTG 884

Query:   256 GPHGVIGKRMSQMFYEAQK 274
                G  G+ + ++F  AQ+
Sbjct:   885 AGRGHAGRIIHKLFVNAQR 903

GO:0005097 "Rab GTPase activator activity" evidence=IDA

GO:0017137 "Rab GTPase binding" evidence=IPI

GO:0043087 "regulation of GTPase activity" evidence=IDA

GO:0007420 "brain development" evidence=IMP

GO:0043010 "camera-type eye development" evidence=IMP

GO:0060325 "face morphogenesis" evidence=IMP

GO:0021854 "hypothalamus development" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0032851 "positive regulation of Rab GTPase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	340
pfam13890	165	pfam13890, Rab3-GTPase_cat, Rab3 GTPase-activating	2e-58

>gnl|CDD|222437 pfam13890, Rab3-GTPase_cat, Rab3 GTPase-activating protein catalytic subunit

 Score =  185 bits (473), Expect = 2e-58
 Identities = 74/126 (58%), Positives = 88/126 (69%), Gaps = 2/126 (1%)

Query: 20  VIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYS 79
              TED +EE AE LL LG   E S LRA+L S SLLSDM +FKAANPGA+ EDF+RWYS
Sbjct: 39  PPMTEDMLEERAEALLKLGDSEEGSHLRARLQSDSLLSDMSAFKAANPGAVFEDFVRWYS 98

Query: 80  PRDFIESSELDQYGQK--KGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEK 137
           PRD+IE    D+ G    +G LS RM + GN W E+WE A P+PAR Q+ LF+ TKEAEK
Sbjct: 99  PRDWIEEEVTDETGSDADRGYLSERMRIEGNVWWELWERAPPLPAREQKPLFDPTKEAEK 158

Query: 138 ILHLFE 143
           +LH  E
Sbjct: 159 VLHYLE 164

This family is the probable catalytic subunit of the GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). It is likely to convert active Rab3-GTP to the inactive form Rab3-GDP. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. The Rab3 GTPase-activating complex is a heterodimer composed of RAB3GAP and RAB3-GAP150. This complex interacts with DMXL2. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
KOG2390|consensus	669		100.0
PF13890	164	Rab3-GTPase_cat: Rab3 GTPase-activating protein ca	100.0

>KOG2390|consensus

Probab=100.00  E-value=5e-81  Score=630.57  Aligned_cols=315  Identities=32%  Similarity=0.454  Sum_probs=266.5

Q ss_pred             CCCccceeccccCccCCCCChHHHHHHHHHHHhcCCchhhHHHHHHHHHHhhHhhHHHhhhcCCCcchhhhhhhhCCCCc
Q psy9871           4 VRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDF   83 (340)
Q Consensus         4 ~~~~~l~~P~tQ~~~~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mqs~~LlSDM~aFKaANpg~v~eDFVrW~SPrD~   83 (340)
                      .||+|||||+|||  |+|||||||+|++|+|.+||+   |++++.+||+.+|+|||+|||||||||+||||||||||+||
T Consensus       347 ~pdEplYiPvTQE--p~plTEDli~e~~EvllklG~---g~~L~~qm~~~~llsdmeSfkAANPgcilEDFvRWhSPkDw  421 (669)
T KOG2390|consen  347 IPDEPLYIPVTQE--PCPLTEDLIDERNEVLLKLGE---GDRLHLQMELVKLLSDMESFKAANPGCILEDFVRWHSPKDW  421 (669)
T ss_pred             cCCCceeecccCC--CCCCcHHHHHHHHHHHHhcCc---cchhHHHHHHHHHHHHHHHHhcCCCCccHHHhhhhcCCcch
Confidence            4899999999999  999999999999999999999   78999999999999999999999999999999999999999


Q ss_pred             ccccccccccc-cCCccccccCCCCChHHHHhhhcCCCCcccccCCCCcHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q psy9871          84 IESSELDQYGQ-KKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGA  162 (340)
Q Consensus        84 ~~~~~~~~~~~-~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvLh~Let~~p~~l~~qll~~~l~aa  162 (340)
                        +++.||+|+ ++|+||.||+++||+|+++|++|+|+||++|+||||+|+||||||||||+++++||++||+|++||+|
T Consensus       422 --eevsdEkgn~vkgqLS~RM~iegN~W~e~WEtAkpiPv~rQarLFDDt~eaekiLhYLe~~k~ael~e~l~~~l~haa  499 (669)
T KOG2390|consen  422 --EEVSDEKGNPVKGQLSERMLIEGNVWVESWETAKPIPVARQARLFDDTKEAEKILHYLENAKLAELREWLKPTLFHAA  499 (669)
T ss_pred             --hhhcccccccchhhhhhhhccccchHHHHHHhcCCCchhhccccccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence              578999996 69999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCchhHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHHHHhh-hc-CCCCCchHHHHHH
Q psy9871         163 VSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHH-KL-SPDNNDASTQQFL  240 (340)
Q Consensus       163 ~~~l~~~~~~~~lp~~~~~i~~l~~~~~~~l~~~~~~~~~~~~l~~~i~~vE~~v~~a~SL~~-Kf-~~~~~~~~l~~~v  240 (340)
                      +.+|.+  +..+...+.+.+-|+......+.+.+++..+++.+||.+|+.||+++.++.+|++ ++ ++++.+..+++ |
T Consensus       500 ~lkl~e--sL~n~e~~~k~~~qi~k~ls~~c~~~~~~d~eL~~ic~qie~ve~m~~R~~qlk~fem~~~yps~sslq~-v  576 (669)
T KOG2390|consen  500 LLKLTE--SLGNSEEKQKQRTQIAKILSNACLNNTPMDNELSKICSQIEMVENMKVRLMQLKEFEMHPPYPSESSLQS-V  576 (669)
T ss_pred             HHHHHH--hhcchHHHHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccchhh-h
Confidence            999988  4455555555555555555566677788889999999999999999999999999 33 45577778888 6


Q ss_pred             HHHhhCCCceeecCCCCcchHHHHHHHhhhhhccc--ccc-ccCCCCCCCCCCCCcceeEEEEeeCC-CCCCCCCCC-Cc
Q psy9871         241 ADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKD--TDV-WKLPASPFSPLPSPACREFILRVVAP-RPAPSSRPT-PH  315 (340)
Q Consensus       241 ~~ll~~~e~~v~v~~~~~g~~g~~i~~lf~~~~~~--~~~-~~~~~s~~~~~p~P~~REyIlR~~~~-rp~~~S~~~-Pq  315 (340)
                      +  |.++|  |...|.    .|.+|++.|+.++-.  ... ..+-.-...+.+.++.||||+|+.++ ++.++|..+ ||
T Consensus       577 k--L~~~e--vl~~d~----~~tiv~rrf~~ag~g~L~r~~~prlqn~v~de~~~~ske~ipRtt~~~~t~~ks~~l~pq  648 (669)
T KOG2390|consen  577 K--LVNIE--VLNLDE----EPTIVIRRFDPAGIGKLDRLTEPRLQNGVRDEYIFNSKESIPRTTTIPMTHRKSADLSPQ  648 (669)
T ss_pred             h--cccHh--hhccCc----ccceeeeccccccchHHHhhccHhhhccCcccccccccCccccccCCcccccchhhcCCC
Confidence            6  44555  444422    234455555554410  000 00011125688999999999998864 899999988 99


Q ss_pred             eEEEEecCCCceEEEeeeccCC
Q psy9871         316 KLTALIMAPDSLIMSGCFTQDT  337 (340)
Q Consensus       316 RMYa~lt~~e~~Rlagafs~d~  337 (340)
                      +||+..++.. +|+|||||++|
T Consensus       649 ~mrs~~t~e~-~rl~gafss~t  669 (669)
T KOG2390|consen  649 DMRSLYTSEA-NRLNGAFSSYT  669 (669)
T ss_pred             Ccchhhhhhh-hhhcccccCCC
Confidence            9999999999 99999999986

>PF13890 Rab3-GTPase_cat: Rab3 GTPase-activating protein catalytic subunit

Probab=100.00  E-value=9.6e-68  Score=469.65  Aligned_cols=139  Identities=58%  Similarity=0.925  Sum_probs=134.1

Q ss_pred             CCCccceeccccCccCCCCChHHHHHHHHHHHhcCCchhhHHHHHHHHHHhhHhhHHHhhhcCCCcchhhhhhhhCCCCc
Q psy9871           4 VRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDF   83 (340)
Q Consensus         4 ~~~~~l~~P~tQ~~~~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mqs~~LlSDM~aFKaANpg~v~eDFVrW~SPrD~   83 (340)
                      ..|+|||+|+||+  ++|||||||+||+++|.+||++++|+++|+||||++|+|||||||||||||||+|||||||||||
T Consensus        24 ~~gepl~~P~tQ~--~~p~TeD~l~e~~e~l~~lg~~~~~~~~r~~mQs~~LlSDM~aFKAANpg~vfeDFVRW~SPrDw  101 (164)
T PF13890_consen   24 ETGEPLYIPITQE--PPPMTEDMLEEQEEELLKLGTSAEGSELRARMQSASLLSDMQAFKAANPGCVFEDFVRWYSPRDW  101 (164)
T ss_pred             CCCCEeecCCCCC--CCCCcHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCcchHhhhhccCCCCc
Confidence            4699999999999  99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccc--cCCccccccCCCCChHHHHhhhcCCCCcccccCCCCcHHHHHHHHHHHhc
Q psy9871          84 IESSELDQYGQ--KKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFEC  144 (340)
Q Consensus        84 ~~~~~~~~~~~--~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvLh~Let  144 (340)
                      ++++..+++++  .+|+||+||+++||+|+++|++|+|+||++||||||+++|||||||||||
T Consensus       102 ~~~~~~~~~~~~~~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvlhyLEt  164 (164)
T PF13890_consen  102 IEEEVDDEKGNFAPEGYLSERMRIPGNIWRELWESAKPVPASRQKRLFDPTKEAEKVLHYLET  164 (164)
T ss_pred             CcCcccccccCCCCCCCccHHHcCCCChHHHHHhcCCCCChhhccccCChHHHHHHHHHHHhC
Confidence            99887777654  49999999999999999999999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 46/288 (15%), Positives = 85/288 (29%), Gaps = 69/288 (23%)

Query: 9   LYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSA----SLL-----SDM 59
           L YQI  ++            D    + L      ++LR  L S      LL      + 
Sbjct: 205 LLYQIDPNW--------TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 60  ESFKAANPGA-IL--------EDFIRWYSPRDFIESSELDQYGQKKG-SLSARML----- 104
           +++ A N    IL         DF+   +                +  SL  + L     
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316

Query: 105 -LPGNTWREV-----------WEAAKPVPARRQRRLFNDTKEAEKILHLF-ECQSPG--- 148
            LP    REV            E+ +   A        +  +   I+        P    
Sbjct: 317 DLP----REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372

Query: 149 ----SVAVLLVPALIHGAVSRLL--EAIHSVPVPSLGRMASH-LIKRVEFATRCSEMELK 201
                ++V    A I   +  L+  + I S  +  + ++  + L+++    +  S   + 
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI- 431

Query: 202 RYQDICSEIGQIEAL----VSQYHSL----HHKLSPDNNDASTQQFLA 241
            Y ++  ++    AL    V  Y+         L P   D      + 
Sbjct: 432 -YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00