Domain ID e1gqqB3

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  • A: a/b three-layered sandwiches
  • X: MurD-like peptide ligases, peptide-binding domain
  • H: MurD-like peptide ligases, peptide-binding domain
  • T: MurD-like peptide ligases, peptide-binding domain
  • F: Mur_ligase_C
UID: 001386532
Type: Automatic domain
Parent: e1e8cA2
Range: B:322-475
PDB: 1gqq
PDB Description: UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
UniProt: P45066
Species: Haemophilus influenzae

Structure of domain e1gqqB3

Structural contacts of domain e1gqqB3 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gqqA4 B:x,y,z->A:-X+2,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e1gqqB3 B:x,y,z->B:X-1/2,-Y+1/2,-Z+1 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e1gqqB3 B:X-1/2,-Y+1/2,-Z+1->B:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e1gqqA3 B:-X+3/2,-Y,Z-1/2->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol