ECOD: domain e1gqyB1

Domain ID e1gqyB1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: MurCD/PglD N-terminal domain-like
F: Mur_ligase

UID:	000100055
Type:	Automatic domain
Parent:	e1j6uA1
Range:	B:11-106
PDB:	1gqy
PDB Description:	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
UniProt:	P45066
Species:	Haemophilus influenzae

Domain
In chain context
In PDB context

Structure of domain e1gqyB1

Domains in the same chain:

Download Pymol

e1gqyB1	B:11-106	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e1gqyB2	B:107-321	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1gqyB3	B:322-473	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e1gqyA1	A:11-106	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e1gqyA2	A:107-321	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1gqyA3	A:322-473	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain
e1gqyB1	B:11-106	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e1gqyB2	B:107-321	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1gqyB3	B:322-473	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e1gqyB1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1gqyA2	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1gqyA3	B:x,y,z->A:X-1,Y,Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e1gqyA1	B:x,y,z->A:X-1,Y,Z	Rossmann-related	Interaction Interface Pymol