ECOD: domain e1hr0E2

Domain ID e1hr0E2

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: Ribosomal_S5_C

UID:	000071183
Type:	Automatic domain
Parent:	e1pkpA2
Range:	E:74-143
PDB:	1hr0
PDB Description:	30S RIBOSOMAL PROTEIN S5
UniProt:	Q5SHQ5
Species:	Thermus thermophilus

Domains in the same chain:

Download Pymol

e1hr0E1	E:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e1hr0E2	E:74-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e1hr0B1	B:7-127,B:157-240	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e1hr0C2	C:2-106	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e1hr0C1	C:107-207	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e1hr0D1	D:2-209	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e1hr0E1	E:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e1hr0E2	E:74-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1hr0F1	F:1-97	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e1hr0G1	G:12-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e1hr0H1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e1hr0H2	H:67-137	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e1hr0I1	I:2-128	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1hr0J1	J:3-100	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e1hr0K1	K:11-129	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1hr0L1	L:5-122	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1hr0M1	M:2-126	HhH/H2TH	H2TH	H2TH
e1hr0N1	N:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1hr0O1	O:3-87	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e1hr0P1	P:1-83	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e1hr0Q1	Q:2-105	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1hr0R1	R:19-88	HTH	HTH	tri-helical
e1hr0S1	S:2-81	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e1hr0T1	T:8-106	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e1hr0W1	W:1-71	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e1hr0E2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1hr0H2	E:X,Y,Z->H:x,y,z	Ribosomal protein S8, C-terminal domain	Interaction Interface Pymol
e1hr0D1	E:x,y,z->D:X,Y,Z	Ubiquitin-related	Interaction Interface Pymol