| UID: | 000095548 |
|---|---|
| Type: | Automatic domain |
| Parent: | e5rubA2 |
| Range: | B:151-475 |
| Ligands: | CAP MG |
| PDB: | 1ir1 |
| PDB Description: | LARGE SUBUNIT OF RUBISCO |
| UniProt: | P00875 |
| Species: | Spinacia oleracea |
Structure of domain e1ir1B2
Domains in the same chain:
| e1ir1B1 | B:12-147 | Alpha-beta plaits | RuBisCO, large subunit, small (N-terminal) domain | RuBisCO, large subunit, small (N-terminal) domain |
| e1ir1B2 | B:151-475 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Domains in the same PDB:
Structural contacts of domain e1ir1B2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ir1B1 | B:x,y,z->B:-X,Y,-Z+1/2 | RuBisCO, large subunit, small (N-terminal) domain | Interaction Interface Pymol |
| e1ir1B2 | B:x,y,z->B:-X,Y,-Z+1/2 | TIM barrels | Interaction Interface Pymol |
| e1ir1B1 | B:-X,Y,-Z+1/2->B:x,y,z | RuBisCO, large subunit, small (N-terminal) domain | Interaction Interface Pymol |
| e1ir1B2 | B:-X,Y,-Z+1/2->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1ir1T1 | B:X,Y,Z->T:x,y,z | RuBisCO, small subunit | Interaction Interface Pymol |
| e1ir1S1 | B:X,Y,Z->S:x,y,z | RuBisCO, small subunit | Interaction Interface Pymol |
| e1ir1A1 | B:x,y,z->A:X,Y,Z | RuBisCO, large subunit, small (N-terminal) domain | Interaction Interface Pymol |
| e1ir1A2 | B:x,y,z->A:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e1ir1C2 | B:X,Y,Z->C:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1ir1A1 | B:x,y,z->A:-X,Y,-Z+1/2 | RuBisCO, large subunit, small (N-terminal) domain | Interaction Interface Pymol |
| e1ir1B2 | B:x,y,z->B:X,-Y+1,-Z | TIM barrels | Interaction Interface Pymol |
| e1ir1B2 | B:X,-Y+1,-Z->B:x,y,z | TIM barrels | Interaction Interface Pymol |
