Domain ID e1jk8B3

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001393232
Type: Automatic domain
Parent: e1k5nB1
Range: B:93-192
PDB: 1jk8
PDB Description: MHC class II HLA-DQ8
UniProt: P01920
Hsap BLAST neighbor: P01920
Species: Homo sapiens

Structure of domain e1jk8B3

Structural contacts of domain e1jk8B3 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jk8A2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e1jk8A1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1jk8B3 B:x,y,z->B:-X+1,Y-1/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e1jk8B3 B:x,y,z->B:-X+1,Y-1/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e1jk8B3 B:-X+1,Y-1/2,-Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1jk8A1 B:x,y,z->A:-X,Y-1/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e1jk8A2 B:x,y,z->A:-X+1,Y-1/2,-Z+1 MHC antigen-recognition domain Interaction Interface Pymol