| UID: | 000046124 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2hyeC2 |
| Range: | B:603-685 |
| PDB: | 1ldk |
| PDB Description: | CULLIN HOMOLOG |
| UniProt: | Q13616 |
| Hsap BLAST neighbor: | Q13616 |
| Species: | Homo sapiens |
Structure of domain e1ldkB2
Domains in the same chain:
| e1ldkB3 | B:411-504 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1ldkB4 | B:521-618 | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins |
| e1ldkB2 | B:603-685 | HTH | HTH | winged |
| e1ldkB1 | B:687-776 | HTH | HTH | winged |
Domains in the same PDB:
| e1ldkA1 | A:17-55,A:82-410 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1ldkB3 | B:411-504 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1ldkB4 | B:521-618 | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins |
| e1ldkB2 | B:603-685 | HTH | HTH | winged |
| e1ldkB1 | B:687-776 | HTH | HTH | winged |
| e1ldkC1 | C:1019-1106 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e1ldkD1 | D:2002-2140 | POZ domain | POZ domain | POZ domain |
| e1ldkE1 | E:3109-3149 | F-box domain | F-box domain | F-box domain |
Structural contacts of domain e1ldkB2 of H-group "HTH":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ldkC1 | B:X,Y,Z->C:x,y,z | RING/U-box-like | Interaction Interface Pymol |
| e1ldkB2 | B:x,y,z->B:-X+1/2,Y-1/2,-Z+2 | HTH | Interaction Interface Pymol |
| e1ldkB2 | B:-X+1/2,Y-1/2,-Z+2->B:x,y,z | HTH | Interaction Interface Pymol |
| e1ldkB4 | B:-X+1/2,Y-1/2,-Z+2->B:x,y,z | a+b domain in cullin-like proteins | Interaction Interface Pymol |
| e1ldkA1 | B:X,Y,Z-1->A:x,y,z | ARM repeat | Interaction Interface Pymol |
