| UID: | 000051878 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1fs1A1 |
| Range: | E:3109-3149 |
| PDB: | 1ldk |
| PDB Description: | SKP2-like protein type gamma |
| UniProt: | Q13309 |
| Hsap BLAST neighbor: | Q13309 |
| Species: | Homo sapiens |
Structure of domain e1ldkE1
Domains in the same chain:
| e1ldkE1 | E:3109-3149 | F-box domain | F-box domain | F-box domain |
Domains in the same PDB:
| e1ldkA1 | A:17-55,A:82-410 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1ldkB3 | B:411-504 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1ldkB4 | B:521-618 | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins |
| e1ldkB2 | B:603-685 | HTH | HTH | winged |
| e1ldkB1 | B:687-776 | HTH | HTH | winged |
| e1ldkC1 | C:1019-1106 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e1ldkD1 | D:2002-2140 | POZ domain | POZ domain | POZ domain |
| e1ldkE1 | E:3109-3149 | F-box domain | F-box domain | F-box domain |
Structural contacts of domain e1ldkE1 of H-group "F-box domain":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ldkD1 | E:x,y,z->D:X,Y,Z | POZ domain | Interaction Interface Pymol |
| e1ldkE1 | E:x,y,z->E:-X+1,-Y,Z | F-box domain | Interaction Interface Pymol |
| e1ldkE1 | E:-X+1,-Y,Z->E:x,y,z | F-box domain | Interaction Interface Pymol |
| e1ldkA1 | E:x,y,z->A:X,Y,Z | ARM repeat | Interaction Interface Pymol |
| e1ldkD1 | E:x,y,z->D:-X+1,-Y,Z | POZ domain | Interaction Interface Pymol |
