| UID: | 000008775 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:2-290 |
| Ligands: | MN MPD OXL SO4 |
| PDB: | 1nvm |
| PDB Description: | 4-hydroxy-2-oxovalerate aldolase |
| UniProt: | P51016 |
| Hsap BLAST neighbor: | Q8TB92 |
| Species: | Pseudomonas sp. CF600 |
Structure of domain e1nvmA2
Domains in the same chain:
| e1nvmA2 | A:2-290 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1nvmA1 | A:291-341 | RuvA-C | post-HMGL domain-like | post-HMGL domain-like |
Domains in the same PDB:
Structural contacts of domain e1nvmA2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1nvmC2 | A:X,Y,Z->C:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1nvmC1 | A:X,Y,Z->C:x,y,z | post-HMGL domain-like | Interaction Interface Pymol |
| e1nvmB1 | A:X,Y,Z->B:x,y,z | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | Interaction Interface Pymol |
| e1nvmF2 | A:x,y,z->F:-X+3/2,-Y,Z-1/2 | Rossmann-related | Interaction Interface Pymol |
| e1nvmF1 | A:x,y,z->F:-X+3/2,-Y,Z-1/2 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | Interaction Interface Pymol |
| e1nvmB1 | A:-X+1,Y-1/2,-Z-1/2->B:x,y,z | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | Interaction Interface Pymol |
| e1nvmH1 | A:x,y,z->H:-X+1/2,-Y,Z-1/2 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | Interaction Interface Pymol |
| e1nvmD2 | A:x,y,z->D:X-1/2,-Y+1/2,-Z | Rossmann-related | Interaction Interface Pymol |
