Domain ID e1nvmE1

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  • A: alpha arrays
  • X: RuvA-C
  • H: post-HMGL domain-like
  • T: post-HMGL domain-like
  • F: DmpG_comm
UID: 000048690
Type: Automatic domain
Parent: e1nvmA1
Range: E:291-339
Ligands: OXL SO4
PDB: 1nvm
PDB Description: 4-hydroxy-2-oxovalerate aldolase
UniProt: P51016
Species: Pseudomonas sp. CF600

Structure of domain e1nvmE1

Domains in the same chain:

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e1nvmE2 E:2-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmE1 E:291-339 RuvA-C post-HMGL domain-like post-HMGL domain-like

Domains in the same PDB:

e1nvmA2 A:2-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmA1 A:291-341 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmB2 B:1-131,B:287-312 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmB1 B:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmC2 C:3-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmC1 C:291-339 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmD2 D:3-131,D:287-310 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmD1 D:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmE2 E:2-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmE1 E:291-339 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmF2 F:4-131,F:287-312 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmF1 F:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmG2 G:3-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmG1 G:291-341 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmH2 H:4-131,H:287-310 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmH1 H:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Structural contacts of domain e1nvmE1 of H-group "post-HMGL domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nvmF1 E:X,Y,Z->F:x,y,z Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Interaction Interface Pymol