Domain ID e1nvmB1

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  • A: a+b two layers
  • X: FwdE/GAPDH domain-like
  • H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • F: AcetDehyd-dimer
UID: 000006752
Type: Manual and representative domain
Range: B:132-286
Ligands: NAD
PDB: 1nvm
PDB Description: acetaldehyde dehydrogenase (acylating)
UniProt: Q52060
Species: Pseudomonas sp. CF600

Structure of domain e1nvmB1

Domains in the same chain:

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e1nvmB2 B:1-131,B:287-312 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmB1 B:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Domains in the same PDB:

e1nvmA2 A:2-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmA1 A:291-341 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmB2 B:1-131,B:287-312 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmB1 B:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmC2 C:3-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmC1 C:291-339 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmD2 D:3-131,D:287-310 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmD1 D:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmE2 E:2-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmE1 E:291-339 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmF2 F:4-131,F:287-312 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmF1 F:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1nvmG2 G:3-290 TIM beta/alpha-barrel TIM barrels TIM barrels
e1nvmG1 G:291-341 RuvA-C post-HMGL domain-like post-HMGL domain-like
e1nvmH2 H:4-131,H:287-310 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1nvmH1 H:132-286 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Structural contacts of domain e1nvmB1 of H-group "Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nvmA1 B:x,y,z->A:X,Y,Z post-HMGL domain-like Interaction Interface Pymol
e1nvmA2 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e1nvmF2 B:x,y,z->F:-X+3/2,-Y,Z-1/2 Rossmann-related Interaction Interface Pymol
e1nvmA2 B:x,y,z->A:-X+1,Y-1/2,-Z-1/2 TIM barrels Interaction Interface Pymol
e1nvmE2 B:x,y,z->E:-X+1/2,-Y,Z-1/2 TIM barrels Interaction Interface Pymol
e1nvmG2 B:x,y,z->G:-X+1/2,-Y,Z-1/2 TIM barrels Interaction Interface Pymol
e1nvmG1 B:x,y,z->G:-X+1/2,-Y,Z-1/2 post-HMGL domain-like Interaction Interface Pymol