ECOD: domain e1ogyM3

Domain ID e1ogyM3

A: a/b three-layered sandwiches
X: Rossmann-like
H: Formate dehydrogenase/DMSO reductase, domains 2 and 3
T: Formate dehydrogenase/DMSO reductase, domains 2 and 3
F: Molybdopterin

UID:	001686398
Type:	Automatic domain
Parent:	e1ogyA4
Range:	M:153-387
Ligands:	MGD MO SF4
PDB:	1ogy
PDB Description:	PERIPLASMIC NITRATE REDUCTASE
UniProt:	Q53176
Species:	Rhodobacter sphaeroides

Domains in the same chain:

Download Pymol

e1ogyM4	M:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyM2	M:68-156,M:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM3	M:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM1	M:682-801	cradle loop barrel	RIFT-related	double psi

Domains in the same PDB:

Structural contacts of domain e1ogyM3 of H-group "Formate dehydrogenase/DMSO reductase, domains 2 and 3":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ogyN1	M:X,Y,Z->N:x,y,z	Di-heme elbow motif	Interaction Interface Pymol

e1ogyA3	A:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyA5	A:68-152,A:384-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA4	A:153-383	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA1	A:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyB1	B:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyC4	C:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyC2	C:68-156,C:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC3	C:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC1	C:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyD1	D:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyE4	E:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyE2	E:68-156,E:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE3	E:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE1	E:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyF1	F:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyG4	G:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyG2	G:68-156,G:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG3	G:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG1	G:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyH1	H:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyI4	I:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyI2	I:68-156,I:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI3	I:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI1	I:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyJ1	J:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyK4	K:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyK2	K:68-156,K:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK3	K:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK1	K:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyL1	L:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyM4	M:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyM2	M:68-156,M:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM3	M:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM1	M:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyN1	N:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif
e1ogyO4	O:12-67	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e1ogyO2	O:68-156,O:388-681	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO3	O:153-387	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO1	O:682-801	cradle loop barrel	RIFT-related	double psi
e1ogyP1	P:2-128	Multiheme cytochromes	Di-heme elbow motif	Di-heme elbow motif