Domain ID e1ogyM3

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Formate dehydrogenase/DMSO reductase, domains 2 and 3
  • T: Formate dehydrogenase/DMSO reductase, domains 2 and 3
  • F: Molybdopterin
UID: 001686398
Type: Automatic domain
Parent: e1ogyA4
Range: M:153-387
Ligands: MGD MO SF4
PDB: 1ogy
PDB Description: PERIPLASMIC NITRATE REDUCTASE
UniProt: Q53176
Species: Rhodobacter sphaeroides

Structure of domain e1ogyM3

Domains in the same chain:

Download Pymol

e1ogyM4 M:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyM2 M:68-156,M:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM3 M:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM1 M:682-801 cradle loop barrel RIFT-related double psi

Domains in the same PDB:

e1ogyA3 A:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyA5 A:68-152,A:384-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA4 A:153-383 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA1 A:682-801 cradle loop barrel RIFT-related double psi
e1ogyB1 B:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyC4 C:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyC2 C:68-156,C:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC3 C:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC1 C:682-801 cradle loop barrel RIFT-related double psi
e1ogyD1 D:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyE4 E:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyE2 E:68-156,E:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE3 E:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE1 E:682-801 cradle loop barrel RIFT-related double psi
e1ogyF1 F:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyG4 G:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyG2 G:68-156,G:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG3 G:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG1 G:682-801 cradle loop barrel RIFT-related double psi
e1ogyH1 H:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyI4 I:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyI2 I:68-156,I:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI3 I:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI1 I:682-801 cradle loop barrel RIFT-related double psi
e1ogyJ1 J:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyK4 K:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyK2 K:68-156,K:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK3 K:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK1 K:682-801 cradle loop barrel RIFT-related double psi
e1ogyL1 L:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyM4 M:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyM2 M:68-156,M:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM3 M:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM1 M:682-801 cradle loop barrel RIFT-related double psi
e1ogyN1 N:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyO4 O:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyO2 O:68-156,O:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO3 O:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO1 O:682-801 cradle loop barrel RIFT-related double psi
e1ogyP1 P:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif

Structural contacts of domain e1ogyM3 of H-group "Formate dehydrogenase/DMSO reductase, domains 2 and 3":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ogyN1 M:X,Y,Z->N:x,y,z Di-heme elbow motif Interaction Interface Pymol