Domain ID e1ogyP1

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  • A: few secondary structure elements
  • X: Multiheme cytochromes
  • H: Di-heme elbow motif
  • T: Di-heme elbow motif
  • F: NapB
UID: 000092256
Type: Automatic domain
Parent: e1jniA1
Range: P:2-128
Ligands: HEC
PDB: 1ogy
PDB Description: DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE
UniProt: Q53177
Species: Rhodobacter sphaeroides

Structure of domain e1ogyP1

Domains in the same chain:

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e1ogyP1 P:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif

Domains in the same PDB:

e1ogyA3 A:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyA5 A:68-152,A:384-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA4 A:153-383 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyA1 A:682-801 cradle loop barrel RIFT-related double psi
e1ogyB1 B:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyC4 C:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyC2 C:68-156,C:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC3 C:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyC1 C:682-801 cradle loop barrel RIFT-related double psi
e1ogyD1 D:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyE4 E:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyE2 E:68-156,E:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE3 E:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyE1 E:682-801 cradle loop barrel RIFT-related double psi
e1ogyF1 F:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyG4 G:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyG2 G:68-156,G:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG3 G:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyG1 G:682-801 cradle loop barrel RIFT-related double psi
e1ogyH1 H:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyI4 I:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyI2 I:68-156,I:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI3 I:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyI1 I:682-801 cradle loop barrel RIFT-related double psi
e1ogyJ1 J:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyK4 K:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyK2 K:68-156,K:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK3 K:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyK1 K:682-801 cradle loop barrel RIFT-related double psi
e1ogyL1 L:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyM4 M:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyM2 M:68-156,M:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM3 M:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyM1 M:682-801 cradle loop barrel RIFT-related double psi
e1ogyN1 N:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif
e1ogyO4 O:12-67 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1ogyO2 O:68-156,O:388-681 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO3 O:153-387 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1ogyO1 O:682-801 cradle loop barrel RIFT-related double psi
e1ogyP1 P:2-128 Multiheme cytochromes Di-heme elbow motif Di-heme elbow motif

Structural contacts of domain e1ogyP1 of H-group "Di-heme elbow motif":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ogyO1 P:x,y,z->O:X,Y,Z RIFT-related Interaction Interface Pymol
e1ogyO2 P:x,y,z->O:X,Y,Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e1ogyO3 P:x,y,z->O:X,Y,Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e1ogyO4 P:x,y,z->O:X,Y,Z Formate dehydrogenase/DMSO reductase, domain 1 Interaction Interface Pymol
e1ogyJ1 P:x,y,z->J:X,Y,Z Di-heme elbow motif Interaction Interface Pymol
e1ogyI2 P:x,y,z->I:X,Y,Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e1ogyI4 P:x,y,z->I:X,Y,Z Formate dehydrogenase/DMSO reductase, domain 1 Interaction Interface Pymol
e1ogyF1 P:x,y,z->F:X,Y,Z Di-heme elbow motif Interaction Interface Pymol
e1ogyL1 P:x,y,z->L:X,Y,Z Di-heme elbow motif Interaction Interface Pymol
e1ogyB1 P:x,y,z->B:X,Y,Z Di-heme elbow motif Interaction Interface Pymol
e1ogyK1 P:x,y,z->K:X,Y,Z RIFT-related Interaction Interface Pymol