Domain ID e1qu2A3

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • F: zf-FPG_IleRS
UID: 000089756
Type: Automatic domain
Parent: e1ffyA5
Range: A:881-916
Ligands: ZN
PDB: 1qu2
PDB Description: ISOLEUCYL-TRNA SYNTHETASE
UniProt: P41972
Species: Staphylococcus aureus

Structure of domain e1qu2A3

Domains in the same chain:

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e1qu2A7 A:1-175,A:524-585 HUP domain-like HUP domains HUP domains
e1qu2A4 A:176-200,A:395-457 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1qu2A1 A:201-394 cradle loop barrel RIFT-related acid protease
e1qu2A6 A:458-523 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1qu2A2 A:586-790 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A5 A:790-880 A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A3 A:881-916 Glucocorticoid receptor-like LIM domain-like Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases

Domains in the same PDB:

e1qu2A7 A:1-175,A:524-585 HUP domain-like HUP domains HUP domains
e1qu2A4 A:176-200,A:395-457 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1qu2A1 A:201-394 cradle loop barrel RIFT-related acid protease
e1qu2A6 A:458-523 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1qu2A2 A:586-790 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A5 A:790-880 A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A3 A:881-916 Glucocorticoid receptor-like LIM domain-like Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases

Structural contacts of domain e1qu2A3 of H-group "LIM domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1qu2A1 A:-X+3/2,-Y+2,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1qu2A4 A:-X+1/2,-Y+2,Z-1/2->A:x,y,z Rubredoxin-related Interaction Interface Pymol