ECOD: domain e1qu2A1

Domain ID e1qu2A1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: acid protease
F: tRNA-synt_1_2

UID:	000023413
Type:	Automatic domain
Parent:	e1ffyA1
Range:	A:201-394
Ligands:	ZN
PDB:	1qu2
PDB Description:	ISOLEUCYL-TRNA SYNTHETASE
UniProt:	P41972
Hsap BLAST neighbor:	Q9NSE4
Species:	Staphylococcus aureus

Domains in the same chain:

Download Pymol

e1qu2A7	A:1-175,A:524-585	HUP domain-like	HUP domains	HUP domains
e1qu2A4	A:176-200,A:395-457	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1qu2A1	A:201-394	cradle loop barrel	RIFT-related	acid protease
e1qu2A6	A:458-523	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1qu2A2	A:586-790	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A5	A:790-880	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A3	A:881-916	Glucocorticoid receptor-like	LIM domain-like	Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases

Domains in the same PDB:

e1qu2A7	A:1-175,A:524-585	HUP domain-like	HUP domains	HUP domains
e1qu2A4	A:176-200,A:395-457	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1qu2A1	A:201-394	cradle loop barrel	RIFT-related	acid protease
e1qu2A6	A:458-523	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1qu2A2	A:586-790	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A5	A:790-880	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e1qu2A3	A:881-916	Glucocorticoid receptor-like	LIM domain-like	Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases

Structural contacts of domain e1qu2A1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ffyA1	A:X-1/2,-Y+3/2,-Z+1->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1ffyA1	A:X-1/2,-Y+3/2,-Z+1->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1qu2A5	A:x,y,z->A:-X+3/2,-Y+2,Z-1/2	A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Interaction Interface Pymol
e1qu2A3	A:x,y,z->A:-X+3/2,-Y+2,Z-1/2	LIM domain-like	Interaction Interface Pymol